BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006530
(641 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129204|ref|XP_002328916.1| predicted protein [Populus trichocarpa]
gi|222839346|gb|EEE77683.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/581 (75%), Positives = 506/581 (87%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDF+EGLRVIGVKP+EKL+LF+DNS RWLV DQGM+A GA++VVRGSRSS EEL
Sbjct: 98 QLEQEILDFSEGLRVIGVKPDEKLALFADNSYRWLVTDQGMMAMGAVDVVRGSRSSIEEL 157
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IY HSESVALAV+NPE FNRI ET CSKAA RF+ILLWG+KS +A + +E IP+FSY
Sbjct: 158 LQIYIHSESVALAVDNPELFNRIVETFCSKAAPRFVILLWGEKSHLAINRMEGIPIFSYK 217
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EIIDLG+ES KAFSDS+DAR+HYKYETI SDDIAT VYTSGTTGNPKGVMLTHKNLLHQI
Sbjct: 218 EIIDLGQESCKAFSDSDDARQHYKYETISSDDIATLVYTSGTTGNPKGVMLTHKNLLHQI 277
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+L+D+VPA+ D+FLSMLPPWH YERA YFIF+ G E +YT VRNLK DLQ+YQPHY+
Sbjct: 278 NNLWDVVPAQPADRFLSMLPPWHAYERAAEYFIFTHGTEQVYTTVRNLKVDLQQYQPHYL 337
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
I+VPLV+ETLYSGIQKQ+ TSSA R+++A I+IS Y KRIYEG L R++K+P Y
Sbjct: 338 ITVPLVFETLYSGIQKQLSTSSALRKILAFMFIKISLTYMEMKRIYEGTYLVRSRKEPPY 397
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
V+++DWLWARII AIL P+H+LA+KLVY KI SAIGISKAGVSGGGSLP H+D F+EAI
Sbjct: 398 FVSMLDWLWARIIAAILLPVHMLAKKLVYSKIHSAIGISKAGVSGGGSLPSHVDKFFEAI 457
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV VQ GYG+TESSPV AARRP+ NVLGS+G PI HTE KIVDAET E LP GSKGIVKV
Sbjct: 458 GVVVQNGYGMTESSPVTAARRPSNNVLGSIGLPIRHTEFKIVDAETGEALPHGSKGIVKV 517
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNP ATKQA+DEDGWLN+GDIGWIAP+HSRGRSR CGGV+VLEGRAKDTI
Sbjct: 518 RGPQVMKGYYKNPLATKQAVDEDGWLNSGDIGWIAPYHSRGRSRHCGGVIVLEGRAKDTI 577
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VL TGENVEPLELEEAA+RSSLI+QIVVIGQDQRR GAI+VP+K+EVL AAK+ SIV D
Sbjct: 578 VLLTGENVEPLELEEAAMRSSLIQQIVVIGQDQRRLGAIVVPNKDEVLEAAKKWSIVDPD 637
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
A+ELSK++ SLL ELRKWTS CSFQIGPI V+DEPFT++
Sbjct: 638 ATELSKKQITSLLNEELRKWTSGCSFQIGPILVIDEPFTID 678
>gi|296089272|emb|CBI39044.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/581 (74%), Positives = 501/581 (86%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDF+EGLR IGVKP+EKL+LF+DNSCRWL+ADQG++A GAINVVRGSRSS EEL
Sbjct: 122 QLEQEILDFSEGLRAIGVKPDEKLALFADNSCRWLIADQGIMAIGAINVVRGSRSSVEEL 181
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IY HSESVALAV+NPE F RIAET CS+AA+RF++LLWG+KS + ++++ +PVF+Y
Sbjct: 182 LQIYIHSESVALAVDNPELFGRIAETFCSRAAIRFVVLLWGEKSCLPSEVMDRVPVFNYK 241
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EIIDLGRE R F DS+ ARK+Y YE I S+DIAT VYTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 242 EIIDLGRECRSVFLDSHYARKNYIYEAISSNDIATLVYTSGTTGNPKGVMLTHQNLLHQI 301
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++L+DIVPAE GD+FLSMLP WH YERA YFIF+ GIE +YT V NLK+DL+RYQP Y+
Sbjct: 302 KNLWDIVPAEPGDRFLSMLPSWHAYERASEYFIFTHGIEQVYTTVPNLKEDLRRYQPQYL 361
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLVYETLYSGIQKQI TSS R++VA IRIS AY KRIYEG L ++QKQ SY
Sbjct: 362 ISVPLVYETLYSGIQKQISTSSTVRKLVALTFIRISLAYMELKRIYEGKFLQKSQKQYSY 421
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+ ++ DWLWA+II AILWP+H+L +KLVY KI SAIGISKAGVSGGGSLP H+D F+EAI
Sbjct: 422 IASIFDWLWAKIIAAILWPVHMLGKKLVYSKIHSAIGISKAGVSGGGSLPSHVDRFFEAI 481
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
+KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP GSKGIVKV
Sbjct: 482 DIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLPPGSKGIVKV 541
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+VLEGRAKDTI
Sbjct: 542 KGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIVLEGRAKDTI 601
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AAKRLSI++A+
Sbjct: 602 VLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAAKRLSILNAN 661
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 662 TSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 702
>gi|225439252|ref|XP_002263501.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Vitis
vinifera]
Length = 691
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/581 (74%), Positives = 501/581 (86%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDF+EGLR IGVKP+EKL+LF+DNSCRWL+ADQG++A GAINVVRGSRSS EEL
Sbjct: 83 QLEQEILDFSEGLRAIGVKPDEKLALFADNSCRWLIADQGIMAIGAINVVRGSRSSVEEL 142
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IY HSESVALAV+NPE F RIAET CS+AA+RF++LLWG+KS + ++++ +PVF+Y
Sbjct: 143 LQIYIHSESVALAVDNPELFGRIAETFCSRAAIRFVVLLWGEKSCLPSEVMDRVPVFNYK 202
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EIIDLGRE R F DS+ ARK+Y YE I S+DIAT VYTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 203 EIIDLGRECRSVFLDSHYARKNYIYEAISSNDIATLVYTSGTTGNPKGVMLTHQNLLHQI 262
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++L+DIVPAE GD+FLSMLP WH YERA YFIF+ GIE +YT V NLK+DL+RYQP Y+
Sbjct: 263 KNLWDIVPAEPGDRFLSMLPSWHAYERASEYFIFTHGIEQVYTTVPNLKEDLRRYQPQYL 322
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLVYETLYSGIQKQI TSS R++VA IRIS AY KRIYEG L ++QKQ SY
Sbjct: 323 ISVPLVYETLYSGIQKQISTSSTVRKLVALTFIRISLAYMELKRIYEGKFLQKSQKQYSY 382
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+ ++ DWLWA+II AILWP+H+L +KLVY KI SAIGISKAGVSGGGSLP H+D F+EAI
Sbjct: 383 IASIFDWLWAKIIAAILWPVHMLGKKLVYSKIHSAIGISKAGVSGGGSLPSHVDRFFEAI 442
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
+KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP GSKGIVKV
Sbjct: 443 DIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLPPGSKGIVKV 502
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+VLEGRAKDTI
Sbjct: 503 KGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIVLEGRAKDTI 562
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AAKRLSI++A+
Sbjct: 563 VLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAAKRLSILNAN 622
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 623 TSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 663
>gi|224055821|ref|XP_002298670.1| predicted protein [Populus trichocarpa]
gi|222845928|gb|EEE83475.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/581 (74%), Positives = 502/581 (86%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LE+EILDF+EGLRVIGVKP+EKL+LF+DNS RWLVADQGM+A GA++VVRGSRSS EEL
Sbjct: 86 QLEEEILDFSEGLRVIGVKPDEKLALFADNSYRWLVADQGMMAMGAVDVVRGSRSSVEEL 145
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IYNHSESVALAV+NPE FNRIAET S AA RF+ILLWG+KSS+ + +E IP+F+Y
Sbjct: 146 LQIYNHSESVALAVDNPELFNRIAETFSSNAAPRFVILLWGEKSSLTINAMEGIPIFNYK 205
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EIIDLGRESRKAF DS DAR+HYKYETI SDDIAT VYTSGTTGNPKGVMLTHKNLLHQI
Sbjct: 206 EIIDLGRESRKAFFDSGDARQHYKYETISSDDIATLVYTSGTTGNPKGVMLTHKNLLHQI 265
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+ ++IVPA+ D+FLSMLPPWH YERAC YFIF+ G E +YT VRN K DLQ+YQPHY+
Sbjct: 266 NNFWEIVPAQPADRFLSMLPPWHAYERACEYFIFANGAEQVYTTVRNFKVDLQQYQPHYL 325
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLV+ETLYSGIQKQI SS R+++A I+IS AY KRIYEG LTR+Q + SY
Sbjct: 326 ISVPLVFETLYSGIQKQISKSSTLRKLLAFTFIKISLAYMEMKRIYEGTYLTRSQNEQSY 385
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
V+++ WL ARI AIL P+H+LAEKLVY KIQSAIGI KAGVSGGGSLP H+D F+EAI
Sbjct: 386 FVSILGWLRARIFAAILLPVHMLAEKLVYSKIQSAIGIRKAGVSGGGSLPAHVDKFFEAI 445
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV + GYG+TESSPV+AAR+ + NVLGSVGHPI HTE KIVDAET + LP GSKGIV+V
Sbjct: 446 GVVLLNGYGMTESSPVLAARQLSNNVLGSVGHPIRHTEFKIVDAETGKSLPYGSKGIVRV 505
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNP ATKQA+DEDGWLNTGD+GWIAP+HSRG+S RCGG++VLEGRAKDTI
Sbjct: 506 RGPQVMKGYYKNPLATKQAVDEDGWLNTGDLGWIAPYHSRGKSCRCGGIIVLEGRAKDTI 565
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEPLELEEAA++SSLI+QIVVIGQDQRR GAI+VP+KEEVL AK+LSIV AD
Sbjct: 566 VLSTGENVEPLELEEAAMKSSLIQQIVVIGQDQRRLGAIVVPNKEEVLEVAKKLSIVDAD 625
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
A+ELSK++ +LL ELRKWTS+ SFQIGP+ V+DE FT++
Sbjct: 626 ATELSKKQIANLLDKELRKWTSEASFQIGPVLVIDESFTID 666
>gi|356512427|ref|XP_003524920.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 733
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/582 (71%), Positives = 499/582 (85%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++LEQ ILDFAEGLRVIGV+P+EKL+LF+DNSCRWLVADQGM+A+GAINVVRGSRSS EE
Sbjct: 124 TQLEQAILDFAEGLRVIGVRPDEKLALFADNSCRWLVADQGMMASGAINVVRGSRSSVEE 183
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL IYNHSESVAL V+NPE FNR+A T S+ +MRFIILLWG+K+ + + +PVF++
Sbjct: 184 LLQIYNHSESVALVVDNPEMFNRVANTFYSRTSMRFIILLWGEKAELVGQENKHVPVFTF 243
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
E+IDLGR+SR+A S+++DA + Y YE I +D IAT VYTSGTTGNPKGVMLTH+NLLHQ
Sbjct: 244 MEVIDLGRQSRRALSNAHDAGQRYIYEAINTDSIATLVYTSGTTGNPKGVMLTHRNLLHQ 303
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
I++L+DIVPAE GD+FLSMLPPWH YERAC YFIF+ GIE +YT VRNLKDDLQRYQP Y
Sbjct: 304 IKNLWDIVPAEAGDRFLSMLPPWHAYERACEYFIFTCGIEQVYTTVRNLKDDLQRYQPQY 363
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ISVPLV+ETLYSGI KQI T S R++VA IR S AY +KRIYEG CLT+N+KQ S
Sbjct: 364 LISVPLVFETLYSGIMKQISTGSVVRKLVALTFIRSSIAYMEYKRIYEGKCLTKNKKQAS 423
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 413
Y +++DWLWAR I IL PLH+LA+KLVY KI SAIGISKAG+SGGGSLP +D F+EA
Sbjct: 424 YAYSMLDWLWARTIATILLPLHILAKKLVYSKIHSAIGISKAGISGGGSLPWEVDKFFEA 483
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IGVKVQ GYGLTE+SPVIAARRP CNV+GSVGHPI HTE KIVD+ET+EVLP GSKGI+K
Sbjct: 484 IGVKVQNGYGLTETSPVIAARRPRCNVIGSVGHPIRHTEFKIVDSETDEVLPPGSKGILK 543
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG QVM+GYFKN AT QALD DGWLNTGDIGWI PHHS GRSR GV+V+EGRAKDT
Sbjct: 544 VRGPQVMEGYFKNSLATNQALDGDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVEGRAKDT 603
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVLSTGENVEPLELEEAA+RSS+I+QIVV+GQD+RR GA+IVP+KEEVL A++LSI+ +
Sbjct: 604 IVLSTGENVEPLELEEAAMRSSIIQQIVVVGQDKRRLGAVIVPNKEEVLKVARKLSIIDS 663
Query: 594 DASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
++S++S+EK SL+Y EL+ WTS+ FQIGPI +V+EPFT++
Sbjct: 664 NSSDVSEEKVTSLIYKELKTWTSESPFQIGPILLVNEPFTID 705
>gi|449527657|ref|XP_004170826.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like,
partial [Cucumis sativus]
Length = 672
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/581 (69%), Positives = 492/581 (84%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQ IL+F+EGLRVIG+KP+EK++LF+DNSCRWLVADQG++ GAINVVRGSRSSSEEL
Sbjct: 64 ELEQSILNFSEGLRVIGIKPDEKIALFADNSCRWLVADQGIMTMGAINVVRGSRSSSEEL 123
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IYNHSESVAL V+NPE FNRI ET K +MR +ILLWG+KSS+A + V+ I VF Y+
Sbjct: 124 LQIYNHSESVALVVDNPELFNRIVETFHLKTSMRCVILLWGEKSSLANEGVDGITVFDYN 183
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I+D+GRESRK S+DA++ Y YE I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 184 DIMDMGRESRKVMLGSHDAKQCYTYEPINSDDIATLVYTSGTTGNPKGVMLTHRNLLHQI 243
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++L+DIVPA+ GDKFLSMLPPWH YERAC YFIF+ G+E YT +RNLKDDL+ YQP Y+
Sbjct: 244 KNLWDIVPAKVGDKFLSMLPPWHAYERACEYFIFTFGVEQAYTTIRNLKDDLRHYQPDYL 303
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLVYETLYSGIQKQI SS R+++ A I +S AY KRIYEG LTR+ QP++
Sbjct: 304 ISVPLVYETLYSGIQKQILASSNLRKLIVLAFINVSLAYMELKRIYEGTYLTRSNVQPTH 363
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
LV+ +DWL+AR+ +ILWP+H+LA+ +VY K+QSAIGI KAG+SGGGSLP H+DLF+EAI
Sbjct: 364 LVSALDWLFARMTASILWPIHMLAKIIVYSKVQSAIGIWKAGISGGGSLPSHVDLFFEAI 423
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ VQ GYGLTE SPV+AARRPTCNVLGSVGHPI HTE +IVD ET + LP GS+GIV+V
Sbjct: 424 GITVQNGYGLTECSPVVAARRPTCNVLGSVGHPIRHTEFRIVDMETGDALPPGSRGIVEV 483
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KN SAT+Q LD++GW ++GDIGWIAPHHSRGRSRRCGGV+VL+GRAKDTI
Sbjct: 484 RGPQVMKGYYKNSSATQQVLDKEGWFSSGDIGWIAPHHSRGRSRRCGGVIVLDGRAKDTI 543
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VL TGENVEP +EEAA+RS+LI+QIVVIGQDQRR GAI+ P+KEEVL AAK+LS +
Sbjct: 544 VLLTGENVEPTVIEEAAMRSTLIQQIVVIGQDQRRLGAIVFPNKEEVLSAAKKLSAEDSS 603
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
S++S E +L+Y E+RKWTS+C FQIGPI +V+EPFT++
Sbjct: 604 TSDVSNETLTNLIYSEVRKWTSECPFQIGPILIVNEPFTID 644
>gi|449441378|ref|XP_004138459.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like
[Cucumis sativus]
Length = 731
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/581 (69%), Positives = 492/581 (84%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQ IL+F+EGLRVIG+KP+EK++LF+DNSCRWLVADQG++ GAINVVRGSRSSSEEL
Sbjct: 123 ELEQSILNFSEGLRVIGIKPDEKIALFADNSCRWLVADQGIMTMGAINVVRGSRSSSEEL 182
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IYNHSESVAL V+NPE FNRI ET K +MR +ILLWG+KSS+A + V+ I VF Y+
Sbjct: 183 LQIYNHSESVALVVDNPELFNRIVETFHLKTSMRCVILLWGEKSSLANEGVDGITVFDYN 242
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I+D+GRESRK S+DA++ Y YE I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 243 DIMDMGRESRKVMLGSHDAKQCYTYEPINSDDIATLVYTSGTTGNPKGVMLTHRNLLHQI 302
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++L+DIVPA+ GDKFLSMLPPWH YERAC YFIF+ G+E YT +RNLKDDL+ YQP Y+
Sbjct: 303 KNLWDIVPAKVGDKFLSMLPPWHAYERACEYFIFTFGVEQAYTTIRNLKDDLRHYQPDYL 362
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLVYETLYSGIQKQI SS R+++ A I +S AY KRIYEG LTR+ QP++
Sbjct: 363 ISVPLVYETLYSGIQKQILASSNLRKLIVLAFINVSLAYMELKRIYEGTYLTRSNVQPTH 422
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
LV+ +DWL+AR+ +ILWP+H+LA+ +VY K+QSAIGI KAG+SGGGSLP H+DLF+EAI
Sbjct: 423 LVSALDWLFARMTASILWPIHMLAKIIVYSKVQSAIGIWKAGISGGGSLPSHVDLFFEAI 482
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ VQ GYGLTE SPV+AARRPTCNVLGSVGHPI HTE +IVD ET + LP GS+GIV+V
Sbjct: 483 GITVQNGYGLTECSPVVAARRPTCNVLGSVGHPIRHTEFRIVDMETGDALPPGSRGIVEV 542
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KN SAT+Q LD++GW ++GDIGWIAPHHSRGRSRRCGGV+VL+GRAKDTI
Sbjct: 543 RGPQVMKGYYKNSSATQQVLDKEGWFSSGDIGWIAPHHSRGRSRRCGGVIVLDGRAKDTI 602
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VL TGENVEP +EEAA+RS+LI+QIVVIGQDQRR GAI+ P+KEEVL AAK+LS +
Sbjct: 603 VLLTGENVEPTVIEEAAMRSTLIQQIVVIGQDQRRLGAIVFPNKEEVLSAAKKLSAEDSS 662
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
S++S E +L+Y E+RKWTS+C FQIGPI +V+EPFT++
Sbjct: 663 TSDVSNETLTNLIYSEVRKWTSECPFQIGPILIVNEPFTID 703
>gi|22331297|ref|NP_189021.2| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75311239|sp|Q9LK39.1|AAE16_ARATH RecName: Full=Probable acyl-activating enzyme 16, chloroplastic;
Flags: Precursor
gi|9293952|dbj|BAB01855.1| long-chain-fatty-acid CoA ligase [Arabidopsis thaliana]
gi|332643293|gb|AEE76814.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 722
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/609 (68%), Positives = 500/609 (82%), Gaps = 4/609 (0%)
Query: 29 RNCVDAVATRIRISRRNHRF-RVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCR 87
R+ V+ R+ + H F +LEQEILDF EGLRV+GVK +EK++LF+DNSCR
Sbjct: 88 RSSVEKYGDRVAVVDPYHDPPSTFTYRQLEQEILDFVEGLRVVGVKADEKIALFADNSCR 147
Query: 88 WLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
WLVADQG++ATGA+NVVRGSRSS EELL IY HSESVAL V+NPEFFNRIAE+ KAA
Sbjct: 148 WLVADQGIMATGAVNVVRGSRSSVEELLQIYCHSESVALVVDNPEFFNRIAESFSYKAAP 207
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
+F+ILLWG+KSS+ PV+SY+EI G+E R F+ SND+ K Y+YE I DDI
Sbjct: 208 KFVILLWGEKSSLV-TAGRHTPVYSYNEIKKFGQERRAKFARSNDSGK-YEYEYIDPDDI 265
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
AT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP WH YERAC YFI
Sbjct: 266 ATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFI 325
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
F+ G+E YT++R LKDDL+RYQPHY+ISVPLVYETLYSGIQKQI SS AR+ +A LI
Sbjct: 326 FTCGVEQKYTSIRFLKDDLKRYQPHYLISVPLVYETLYSGIQKQISASSPARKFLALTLI 385
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
++S AYT KR+YEG CLT+NQK P Y+V+L+DWLWAR++ LWPLH+LAEKLV++KI+
Sbjct: 386 KVSLAYTEMKRVYEGLCLTKNQKPPMYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIR 445
Query: 388 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
S+IGI+KAGVSGGGSLPMH+D F+EAIGV VQ GYGLTE+SPV++ARR CNVLGSVGHP
Sbjct: 446 SSIGITKAGVSGGGSLPMHVDKFFEAIGVNVQNGYGLTETSPVVSARRLRCNVLGSVGHP 505
Query: 448 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 507
I TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+DGW NTGD+GW
Sbjct: 506 IKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGW 565
Query: 508 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 567
I P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQ
Sbjct: 566 ITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQ 625
Query: 568 RRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 626
RR GAI++P+KE AAK ++S V ++ +ELSKE S++Y ELRKWTS+CSFQ+GP+
Sbjct: 626 RRLGAIVIPNKEAAEGAAKQKISPVDSEVNELSKETITSMVYEELRKWTSQCSFQVGPVL 685
Query: 627 VVDEPFTVN 635
+VDEPFT++
Sbjct: 686 IVDEPFTID 694
>gi|20799733|gb|AAM28629.1|AF503771_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 722
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/609 (68%), Positives = 500/609 (82%), Gaps = 4/609 (0%)
Query: 29 RNCVDAVATRIRISRRNHRF-RVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCR 87
R+ V+ R+ + H F +LEQEILDF EGLRV+GVK +EK++LF+DNSCR
Sbjct: 88 RSSVEKYGDRVAVVDPYHDPPSTFTYRQLEQEILDFVEGLRVVGVKADEKIALFADNSCR 147
Query: 88 WLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
WLVADQG++ATGA+NVVRGSRSS EELL IY HSESVAL V+NPEFFNRIAE+ KAA
Sbjct: 148 WLVADQGIMATGAVNVVRGSRSSVEELLQIYCHSESVALVVDNPEFFNRIAESFSYKAAP 207
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
+F+ILLWG+KSS+ PV+SY+EI G+E R F+ SND+ K Y+YE I DDI
Sbjct: 208 KFVILLWGEKSSLV-TAGRHTPVYSYNEIKKFGQERRAKFARSNDSGK-YEYEYIDPDDI 265
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
AT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP WH YERAC YFI
Sbjct: 266 ATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFI 325
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
F+ G+E YT++R LKDDL+RYQPHY+ISVPLVYETLYSGIQKQI SS AR+ +A LI
Sbjct: 326 FTCGVEQKYTSIRFLKDDLKRYQPHYLISVPLVYETLYSGIQKQISASSPARKFLALTLI 385
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
++S AYT KR+YEG CLT+NQK P Y+V+L+DWLWAR++ LWPLH+LAEKLV++KI+
Sbjct: 386 KVSLAYTEMKRVYEGLCLTKNQKPPMYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIR 445
Query: 388 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
S+IGI+KAGVSGGGSLPMH+D F+EAIGV VQ GYGLTE+SPV++ARR CNVLGSVGHP
Sbjct: 446 SSIGITKAGVSGGGSLPMHVDKFFEAIGVNVQNGYGLTETSPVVSARRLRCNVLGSVGHP 505
Query: 448 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 507
I TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+DGW NTGD+GW
Sbjct: 506 IKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGW 565
Query: 508 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 567
I P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQ
Sbjct: 566 ITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQ 625
Query: 568 RRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 626
RR GAI++P+KE AAK ++S V ++ +ELSKE S++Y ELRKWTS+CSFQ+GP+
Sbjct: 626 RRLGAIVIPNKEAAEGAAKQKISPVDSEVNELSKETITSMVYEELRKWTSQCSFQVGPVL 685
Query: 627 VVDEPFTVN 635
+VDEPFT++
Sbjct: 686 IVDEPFTID 694
>gi|297835432|ref|XP_002885598.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
gi|297331438|gb|EFH61857.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
Length = 722
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/609 (68%), Positives = 501/609 (82%), Gaps = 4/609 (0%)
Query: 29 RNCVDAVATRIRISRRNHRF-RVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCR 87
R+ V+ R+ + H F +LEQEILDF EGLRV+GVK +EK++LF+DNSCR
Sbjct: 88 RSSVEKYGDRVAVVDPYHDPPSTFTYRQLEQEILDFVEGLRVVGVKADEKIALFADNSCR 147
Query: 88 WLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
WLVADQG++ATGA+NVVRGSRSS EELL IY HSESVAL V+NPEFFNRIAE+ KAA
Sbjct: 148 WLVADQGIMATGAVNVVRGSRSSVEELLQIYCHSESVALVVDNPEFFNRIAESFSCKAAP 207
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
+F+ILLWG+KSS+ + PV+SY+EI + G+E R F+ SNDA K Y+YE I DDI
Sbjct: 208 KFVILLWGEKSSLVTAGMP-TPVYSYNEIKNFGQERRAKFARSNDAGK-YEYEFIDPDDI 265
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
AT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP WH YERAC YFI
Sbjct: 266 ATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFI 325
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
F+ G+E YT++R LK DL++YQPHY+ISVPLVYETLYSGIQKQI TSS R+ +A LI
Sbjct: 326 FTCGVEQKYTSIRFLKGDLKQYQPHYLISVPLVYETLYSGIQKQISTSSPVRKFLALTLI 385
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
++S AYT KRIYEG CLT+NQK P Y+V+L+DWLWAR++ +LWPLH+LAEKLV+KKI+
Sbjct: 386 KVSLAYTEMKRIYEGLCLTKNQKPPLYIVSLVDWLWARVVAFVLWPLHILAEKLVHKKIR 445
Query: 388 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
S+IGI+KAGVSGGGSLPMH+D F+EAI V VQ GYGLTE+SPV++ARR CNVLGSVGHP
Sbjct: 446 SSIGITKAGVSGGGSLPMHVDKFFEAISVNVQNGYGLTETSPVVSARRLRCNVLGSVGHP 505
Query: 448 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 507
I TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+DGW NTGD+GW
Sbjct: 506 IKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGW 565
Query: 508 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 567
I P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQ
Sbjct: 566 ITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQ 625
Query: 568 RRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 626
RR GAI++P+KE AAK ++S V + +ELSKE+ S++Y EL+KWTS+CSFQ+GP+
Sbjct: 626 RRLGAIVIPNKEAAEGAAKQKISPVDPEVNELSKERITSMVYEELKKWTSQCSFQVGPVL 685
Query: 627 VVDEPFTVN 635
+VDEPFT++
Sbjct: 686 IVDEPFTID 694
>gi|255559194|ref|XP_002520618.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540179|gb|EEF41754.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 627
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/564 (72%), Positives = 481/564 (85%), Gaps = 2/564 (0%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F ++LEQEIL+F+EGLRVIGVKP EK++LF+DNSCRWLVADQG++A GAINV RGSRSS
Sbjct: 66 FTYNQLEQEILNFSEGLRVIGVKPNEKVALFADNSCRWLVADQGIMAMGAINVARGSRSS 125
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EELL IYNHSESVAL V++PE FNRIAETLCS A + FIILLWG+KSS+A ++ IPV
Sbjct: 126 VEELLQIYNHSESVALVVDSPELFNRIAETLCSNAVITFIILLWGEKSSLAIKGMDGIPV 185
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
F+Y +I++LGRESR+A DS+DA + Y YETI SDD+AT +YTSGTTGNPKGVMLTHKNL
Sbjct: 186 FNYKQIVNLGRESRRALHDSDDAWQRYVYETISSDDVATVIYTSGTTGNPKGVMLTHKNL 245
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQI +L D+ PAE GD+FLSMLPPWHVYER C Y+I + G+E +YT VRNLK+DL++YQ
Sbjct: 246 LHQINNLLDVFPAEPGDRFLSMLPPWHVYERTCEYYIMTLGVEQVYTIVRNLKEDLKQYQ 305
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PHYM SVPLVYETL GIQKQI SS ++VA IR+S AY FKRIYEG LTR QK
Sbjct: 306 PHYMFSVPLVYETL--GIQKQISRSSTIHKLVALTFIRVSLAYMEFKRIYEGTFLTRIQK 363
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 410
QPSYL++L+D LWARI+ AIL P+H+LA+ L Y KI AIGISKAG+S GGSLPMH+D F
Sbjct: 364 QPSYLISLLDCLWARIMAAILLPVHMLAKNLFYHKIHLAIGISKAGISAGGSLPMHVDKF 423
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+EAIGVK+Q GYG+TESSPV A RRPTCNVLGS+GHPI HTE K+VDAET+E LP GSKG
Sbjct: 424 FEAIGVKLQNGYGMTESSPVTAVRRPTCNVLGSIGHPIRHTEFKVVDAETDEALPDGSKG 483
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
IVKVRG QVM+GY+KNP ATKQ LDE+GWLNTGDIGWIAPHHS GRSR+C GV+VLEGRA
Sbjct: 484 IVKVRGPQVMKGYYKNPWATKQVLDEEGWLNTGDIGWIAPHHSIGRSRQCSGVVVLEGRA 543
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
KDTIVLSTGEN+EP E+EEAA+RS+LI+QI+VIGQDQRR GAIIVP+KEEVL+AAK+LSI
Sbjct: 544 KDTIVLSTGENIEPSEIEEAAMRSALIQQIIVIGQDQRRLGAIIVPNKEEVLLAAKKLSI 603
Query: 591 VHADASELSKEKTISLLYGELRKW 614
+ A+ SEL KE+ S+L ELR W
Sbjct: 604 IDANTSELKKEQMASMLDEELRNW 627
>gi|357462831|ref|XP_003601697.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490745|gb|AES71948.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 720
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/582 (69%), Positives = 490/582 (84%), Gaps = 1/582 (0%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L+ IL+FAEGLRVIGVKP+EK++LF+DNSCRWLVADQGM+A GAINVVRGSRSS EEL
Sbjct: 111 QLKDAILNFAEGLRVIGVKPDEKIALFADNSCRWLVADQGMMAIGAINVVRGSRSSIEEL 170
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IYNHSESVALAV+NPE +N+IA+ K ++RFIILLWG+KSS+ + + +P++++
Sbjct: 171 LQIYNHSESVALAVDNPEMYNQIAKPFYLKTSIRFIILLWGEKSSLVNEADKGVPIYTFM 230
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E+I+ GR+SR+A S+DAR+HY +ETI DDIAT VYTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 231 EVINFGRQSRRALHTSDDAREHYIFETIKLDDIATLVYTSGTTGNPKGVMLTHQNLLHQI 290
Query: 235 RSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ L D+VP E GDKFLSMLPPWH YERAC Y +FSRG+E +YT VRNLKDDL RY+PH
Sbjct: 291 KHLSDVVPTTEAGDKFLSMLPPWHAYERACEYLVFSRGLEHIYTTVRNLKDDLGRYKPHL 350
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+SVPLV+ETLYSGI KQI TSS R++VA IR+S Y KRIYEG CLT+NQK PS
Sbjct: 351 MVSVPLVFETLYSGIMKQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKAPS 410
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 413
YL A++DWLWARI+ IL+P+H+LA KLVY KI+S IGIS A +SGGGSLP H+D F+EA
Sbjct: 411 YLYAMLDWLWARIMATILYPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFFEA 470
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+ +Q GYGLTE+SPVIAARR C+V+GSVG+P+ HTE K+VD+ET EVLP GSKGI+K
Sbjct: 471 IGLNLQNGYGLTETSPVIAARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGILK 530
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG Q+M+GY+KNP AT + +D DGWLNTGDIGWIA HHS GRSR GGV+V+EGRAKDT
Sbjct: 531 VRGPQLMKGYYKNPLATNRVIDSDGWLNTGDIGWIAAHHSTGRSRNSGGVIVVEGRAKDT 590
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVLS+GENVEP ELEEAA RS+LI+QIVVIGQD+RR GAIIVP+KEEVL AAK LSI+ +
Sbjct: 591 IVLSSGENVEPGELEEAATRSNLIQQIVVIGQDKRRLGAIIVPNKEEVLKAAKELSIIDS 650
Query: 594 DASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
++S++S+EK SL+Y ELR WTS FQIGPI +V++PFT++
Sbjct: 651 NSSDVSQEKVTSLIYNELRTWTSGFPFQIGPILLVNDPFTID 692
>gi|22328609|ref|NP_193143.2| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
gi|75304726|sp|Q8W471.1|AAE15_ARATH RecName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase
AEE15, chloroplastic; AltName:
Full=Acyl-[acyl-carrier-protein] synthetase; AltName:
Full=Acyl-activating enzyme 15; Flags: Precursor
gi|17065456|gb|AAL32882.1| A6 anther-specific protein [Arabidopsis thaliana]
gi|34098785|gb|AAQ56775.1| At4g14070 [Arabidopsis thaliana]
gi|118420017|gb|ABK88270.1| chloroplast acyl ACP synthetase [Arabidopsis thaliana]
gi|332657967|gb|AEE83367.1| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
Length = 727
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/581 (69%), Positives = 485/581 (83%), Gaps = 12/581 (2%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDFAEGLRV+GVK +EK++LF+DNSCRWLV+DQG++ATGA+NVVRGSRSS EEL
Sbjct: 131 QLEQEILDFAEGLRVLGVKADEKIALFADNSCRWLVSDQGIMATGAVNVVRGSRSSVEEL 190
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IY HSESVA+ V+NPEFFNRIAE+ SKA++RF+ILLWG+KSS+ ++ IPV+SY
Sbjct: 191 LQIYRHSESVAIVVDNPEFFNRIAESFTSKASLRFLILLWGEKSSLVTQGMQ-IPVYSYA 249
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EII+ G+ESR S SND R Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 250 EIINQGQESRAKLSASNDTRS-YRNQFIDSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQI 308
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+ L VPA+ GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y+
Sbjct: 309 KHLSKYVPAQAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYI 368
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+SVPLVYETLYSGIQKQI SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y
Sbjct: 369 VSVPLVYETLYSGIQKQISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMY 428
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAI
Sbjct: 429 IVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAI 488
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV +Q GYGLTE+SPV+ AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KV
Sbjct: 489 GVILQNGYGLTETSPVVCARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKV 548
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNPS TKQ L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTI
Sbjct: 549 RGPQVMKGYYKNPSTTKQVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTI 608
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEPLE+EEAA+RS +I QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 609 VLSTGENVEPLEIEEAAMRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD----- 659
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
E SKE SL+Y ELRKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 660 -PETSKETLKSLVYQELRKWTSECSFQVGPVLIVDDPFTID 699
>gi|20799731|gb|AAM28628.1|AF503770_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 709
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/581 (69%), Positives = 483/581 (83%), Gaps = 12/581 (2%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDFAEGLRV+GVK +EK++LF+DNSCRWLV+DQG++ATGA+NVVRGSRSS EEL
Sbjct: 113 QLEQEILDFAEGLRVLGVKADEKIALFADNSCRWLVSDQGIMATGAVNVVRGSRSSVEEL 172
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IY HSESVA+ V+NPEFFNRIAE+ SKA++RF+ILLWG+KSS+ ++ IPV+SY
Sbjct: 173 LQIYRHSESVAIVVDNPEFFNRIAESFTSKASLRFLILLWGEKSSLVTQGMQ-IPVYSYA 231
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EII+ G+ESR S SND R Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 232 EIINQGQESRAKLSASNDTRS-YRNQFIDSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQI 290
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+ L VPA GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y+
Sbjct: 291 KHLSKYVPALAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYI 350
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+SVPLVYETLYSGIQKQI SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y
Sbjct: 351 VSVPLVYETLYSGIQKQISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMY 410
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAI
Sbjct: 411 IVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAI 470
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV +Q GYGLTE+SPV+ AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KV
Sbjct: 471 GVILQNGYGLTETSPVVCARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKV 530
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNPS TKQ L+E GW NTGD GWIAPHHS+GRSR C GV+VLEGRAKDTI
Sbjct: 531 RGPQVMKGYYKNPSTTKQVLNESGWFNTGDTGWIAPHHSKGRSRHCAGVIVLEGRAKDTI 590
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEPLE+EEAA+RS +I QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 591 VLSTGENVEPLEIEEAAMRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD----- 641
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
E SKE SL+Y ELRKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 642 -PETSKETLKSLVYQELRKWTSECSFQVGPVLIVDDPFTID 681
>gi|356538059|ref|XP_003537522.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Glycine
max]
Length = 720
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/581 (71%), Positives = 490/581 (84%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LE ILDFAEGLRVIGV+P EKL+LF+DNSCRWLVADQGM+A GAINVVRGSRSS EEL
Sbjct: 112 QLEDAILDFAEGLRVIGVRPNEKLALFADNSCRWLVADQGMMACGAINVVRGSRSSIEEL 171
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IYNHSESVALAV+NPE NRIA+ KA+MRFIILLWG+KS + + +E+PVF++
Sbjct: 172 LQIYNHSESVALAVDNPEMLNRIAKLFYLKASMRFIILLWGEKSGLVSEGDKEVPVFTFT 231
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E+I LG+ESR+ DS D RKHY YE I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 232 EVIHLGQESRRVLFDSLDTRKHYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQI 291
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++L DIVPAE GD+FLSMLP WH YERAC YFIFS G+E +YT VRNLK+DL YQPHY+
Sbjct: 292 KNLGDIVPAEVGDRFLSMLPSWHAYERACEYFIFSCGVEQVYTTVRNLKEDLGHYQPHYL 351
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLVYETLYSGIQKQI TSS R++VA IR+S Y KRIYEG CLT++QK PSY
Sbjct: 352 ISVPLVYETLYSGIQKQISTSSLVRKLVALTFIRVSLRYMECKRIYEGKCLTKDQKPPSY 411
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
L +++DWLWAR++ IL+P+HLLA+ LVY KI SAIGISKAGVSGGGSL H+D F+EAI
Sbjct: 412 LHSILDWLWARVVATILFPVHLLAKILVYHKIHSAIGISKAGVSGGGSLSSHVDRFFEAI 471
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV VQ GYGLTE+SPVIAARR + NV+GSVGHPI HTE K+VD+ET+EVLP GSKGI+KV
Sbjct: 472 GVNVQNGYGLTETSPVIAARRLSYNVIGSVGHPIKHTEFKVVDSETDEVLPPGSKGILKV 531
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG Q+M+GY+KNPSAT Q LD DGWLNTGDIGWI PHHS GRSR GV+V++GRAKDTI
Sbjct: 532 RGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVDGRAKDTI 591
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEP ELEEAA+RSSLI QIVVIGQD+RR GA+IVP+KEEVL AA+ SI+ ++
Sbjct: 592 VLSTGENVEPGELEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNKEEVLKAARESSIIDSN 651
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
+S+ S+EK SL+Y ELR WTS+ FQIGP+ +V++PFT++
Sbjct: 652 SSDASQEKVTSLIYKELRTWTSESPFQIGPVLLVNDPFTID 692
>gi|297800864|ref|XP_002868316.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
gi|297314152|gb|EFH44575.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/581 (68%), Positives = 484/581 (83%), Gaps = 12/581 (2%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDFAEGLRV+GVK +EK++LF+DNSCRWLV+DQG++ATGA+NVVRGSRSS EEL
Sbjct: 131 ELEQEILDFAEGLRVLGVKADEKIALFADNSCRWLVSDQGIMATGAVNVVRGSRSSVEEL 190
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IY HSESVAL V+N EFFNRIAE+ SKA++RF+ILLWG+KSS+ ++ IPV++Y
Sbjct: 191 LQIYRHSESVALVVDNSEFFNRIAESFTSKASLRFLILLWGEKSSLVTQGMQ-IPVYTYA 249
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EI + G+ESR S SND R Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 250 EIKNQGQESRAKLSGSNDTRS-YRNQFINSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQI 308
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+ L VPA+ GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y+
Sbjct: 309 KHLSKYVPAQAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYI 368
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+SVPLVYETLYSG+QKQI SSA R+ +A LIR+S AY KRIYEG CLT+ QK P Y
Sbjct: 369 VSVPLVYETLYSGMQKQISASSAGRKFLALTLIRVSMAYMEMKRIYEGMCLTKEQKPPMY 428
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+VA +DWLWAR++ A+LWPLH+LA++L+YKKI S+IGISKAG+SGGGSLP+H+D F+EAI
Sbjct: 429 IVAFVDWLWARVVAALLWPLHMLAKRLIYKKIYSSIGISKAGISGGGSLPIHVDKFFEAI 488
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV +Q GYGLTE+SPV+ AR +CNVLGS G+P++ TE KIVD ETN VLP GSKGI+KV
Sbjct: 489 GVILQNGYGLTETSPVVCARTLSCNVLGSAGNPMHGTEFKIVDPETNNVLPPGSKGIIKV 548
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNPS TK+ L+E GW NTGD GWIAPHHSRGRSRRCGGV+VLEGRAKDTI
Sbjct: 549 RGPQVMKGYYKNPSTTKKVLNESGWFNTGDTGWIAPHHSRGRSRRCGGVIVLEGRAKDTI 608
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEPLE+EEAA+RS LI QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 609 VLSTGENVEPLEIEEAAMRSRLIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD----- 659
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
E SKE SL+Y EL+KWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 660 -PETSKETQKSLVYQELKKWTSECSFQVGPVLIVDEPFTID 699
>gi|1617272|emb|CAA96521.1| AMP-binding protein [Brassica napus]
Length = 701
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/582 (68%), Positives = 487/582 (83%), Gaps = 16/582 (2%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++LEQEILDFAEGLR +GVK +EK++LF+DNSCRWLV+DQG+++TGA+NVVRGSRSS EE
Sbjct: 108 NQLEQEILDFAEGLRAVGVKADEKIALFADNSCRWLVSDQGIMSTGAVNVVRGSRSSVEE 167
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL IY HSESVAL V+NPEFFNRIA+T SK ++RF+ILLWG+KSS+ ++ IPV+SY
Sbjct: 168 LLQIYQHSESVALVVDNPEFFNRIADTFTSKVSLRFLILLWGEKSSLVTQGMQ-IPVYSY 226
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+I +LG+E R + SND RK +I DD A +YTSGTTGNPKGVMLTH+NLLHQ
Sbjct: 227 TDIKNLGQEKR---AGSNDTRK-----SINPDDTAAIMYTSGTTGNPKGVMLTHRNLLHQ 278
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
I+ L VPAE GD+FLSMLP WH YERAC YFIF+ G+E MYT++R LK+DL+RYQPHY
Sbjct: 279 IKHLSAYVPAEAGDRFLSMLPSWHAYERACEYFIFTCGVEQMYTSIRFLKEDLKRYQPHY 338
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ISVPLVYETLYSGIQKQI TSSAAR+ +A LI+IS AY KRIYEG CLT+ QK P
Sbjct: 339 LISVPLVYETLYSGIQKQISTSSAARKYLALTLIKISLAYMEMKRIYEGMCLTKEQKPPM 398
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 413
Y+V+L+DWL AR++ A+LWPLH+LA+ L+YKKI ++IGISKAG+SGGGSLP+HID F+EA
Sbjct: 399 YIVSLVDWLRARVVAALLWPLHMLAKILIYKKIHASIGISKAGISGGGSLPIHIDKFFEA 458
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IGV +Q GYGLTE+SPVI AR +CNV+GS G+P++ TE KIVD ETN VLP GSKGIVK
Sbjct: 459 IGVILQNGYGLTETSPVICARTLSCNVIGSAGYPMHGTEFKIVDPETNTVLPPGSKGIVK 518
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG Q+M+GY+KNP+ TKQ L+E GW NTGD+GWIAPHHS GRSRRCGG++VLEGRAKDT
Sbjct: 519 VRGPQIMKGYYKNPTTTKQVLNESGWFNTGDMGWIAPHHSTGRSRRCGGLIVLEGRAKDT 578
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVLSTGENVEPLE+EEAA+RS LI QIVVIGQDQRR GAII+P+KEE A++L
Sbjct: 579 IVLSTGENVEPLEIEEAAMRSRLIDQIVVIGQDQRRLGAIIMPNKEE----AEKLD---P 631
Query: 594 DASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
+ S+LS EK SL+Y ELRKWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 632 ETSQLSSEKLKSLVYQELRKWTSECSFQVGPVLIVDEPFTID 673
>gi|2244763|emb|CAB10186.1| AMP-binding protein [Arabidopsis thaliana]
gi|7268112|emb|CAB78449.1| AMP-binding protein [Arabidopsis thaliana]
Length = 698
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/581 (68%), Positives = 480/581 (82%), Gaps = 17/581 (2%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDFAEGLRV+GVK +EK++LF+DNSCRWLV+DQG A+NVVRGSRSS EEL
Sbjct: 107 QLEQEILDFAEGLRVLGVKADEKIALFADNSCRWLVSDQG-----AVNVVRGSRSSVEEL 161
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IY HSESVA+ V+NPEFFNRIAE+ SKA++RF+ILLWG+KSS+ ++ IPV+SY
Sbjct: 162 LQIYRHSESVAIVVDNPEFFNRIAESFTSKASLRFLILLWGEKSSLVTQGMQ-IPVYSYA 220
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EII+ G+ESR S SND R Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 221 EIINQGQESRAKLSASNDTRS-YRNQFIDSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQI 279
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+ L VPA+ GDKFLSMLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y+
Sbjct: 280 KHLSKYVPAQAGDKFLSMLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYI 339
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+SVPLVYETLYSGIQKQI SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y
Sbjct: 340 VSVPLVYETLYSGIQKQISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMY 399
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAI
Sbjct: 400 IVAFVDWLWARVIAALLWPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAI 459
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV +Q GYGLTE+SPV+ AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KV
Sbjct: 460 GVILQNGYGLTETSPVVCARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKV 519
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNPS TKQ L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTI
Sbjct: 520 RGPQVMKGYYKNPSTTKQVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTI 579
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VLSTGENVEPLE+EEAA+RS +I QIVVIGQD+RR GAII+P+KEE A+R+
Sbjct: 580 VLSTGENVEPLEIEEAAMRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD----- 630
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
E SKE SL+Y ELRKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 631 -PETSKETLKSLVYQELRKWTSECSFQVGPVLIVDDPFTID 670
>gi|357518659|ref|XP_003629618.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355523640|gb|AET04094.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 823
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/697 (60%), Positives = 503/697 (72%), Gaps = 102/697 (14%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQG------ 94
+ + +H ++LEQ ILD+AEGLRVIGV+P+EKL+LF+DNSCRWLVADQG
Sbjct: 99 VDQYHHPPSTITYNQLEQAILDYAEGLRVIGVRPDEKLALFADNSCRWLVADQGGALAQS 158
Query: 95 ------------------------------------------MLATGAINVVRGSRSSSE 112
M+A+GAINVVRGSRSS E
Sbjct: 159 CCHVAERSRVQVLETTSCVKESVRLRTIHQNGGTSSWTLVLGMMASGAINVVRGSRSSVE 218
Query: 113 ELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS--SVAPDIVEEIPV 170
ELL IYNHSESVALAV+ PE FNRIA+ SK MRFIILLWG+KS ++ + +E+P+
Sbjct: 219 ELLQIYNHSESVALAVDGPEMFNRIAKPFYSKTGMRFIILLWGEKSDLNLIAEENKEVPI 278
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
FS+ E+IDLGRESR A SDS++A + Y YE I SDDIAT +YTSGTTGNPKGVMLTH+NL
Sbjct: 279 FSFMEVIDLGRESRMALSDSHEASQRYVYEAINSDDIATLIYTSGTTGNPKGVMLTHRNL 338
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQI++L+D VPAE GD+FLSMLPPWH YERAC YFIF+ GIE +YT VRNLKDDL RYQ
Sbjct: 339 LHQIKNLWDTVPAEVGDRFLSMLPPWHAYERACEYFIFTCGIEQVYTTVRNLKDDLGRYQ 398
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE----GFCLT 346
PHYMISVPLV+ETLYSGIQKQI TS R++VA IR+S AY +KRIYE G CLT
Sbjct: 399 PHYMISVPLVFETLYSGIQKQISTSPPVRKLVALTFIRVSLAYMEYKRIYEVTLVGKCLT 458
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH 406
RN KQPS + +++D LWARII IL+P+HLLA K VY KI SAIG+SKAG+SGGGSLP+
Sbjct: 459 RNVKQPSIVNSMLDCLWARIIATILFPIHLLAIKFVYSKIHSAIGLSKAGISGGGSLPLE 518
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+D F+EAIGVKVQ GYGLTE+SPVIAARRP CNV+GSVGHP+ HTE K+VD+ET EVLP
Sbjct: 519 VDKFFEAIGVKVQNGYGLTETSPVIAARRPRCNVIGSVGHPVQHTEFKVVDSETGEVLPP 578
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
GSKGI+KVRG VM GY+KNP AT QALD+DGWLNTGD+GWIAPHHS GRSR GV+V+
Sbjct: 579 GSKGILKVRGPPVMNGYYKNPLATNQALDKDGWLNTGDLGWIAPHHSTGRSRNSSGVIVV 638
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
+GRAKDTIVLSTGENVEP ELEEAA+RSS+I+QIVVIGQD+RR GAIIVP+ EEVL A+
Sbjct: 639 DGRAKDTIVLSTGENVEPAELEEAAMRSSIIQQIVVIGQDKRRLGAIIVPNSEEVLKVAR 698
Query: 587 RLSIVHADASE-LSKEKTISLLYGELR-----------------------KWTS------ 616
LSI+ + +S +S+EK ++L+Y EL+ WTS
Sbjct: 699 ELSIIDSISSNVVSEEKVLNLIYKELKTCDRVIGTKYPPALPMSTTAMFTNWTSFLNSDL 758
Query: 617 ----------KCS--------FQIGPIHVVDEPFTVN 635
CS FQIGPI +V+EPFT++
Sbjct: 759 DVFAFISFFLSCSTYRMSESPFQIGPILLVNEPFTID 795
>gi|115456555|ref|NP_001051878.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|41469655|gb|AAS07378.1| putative AMP-binding protein [Oryza sativa Japonica Group]
gi|108712073|gb|ABF99868.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113550349|dbj|BAF13792.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|222626158|gb|EEE60290.1| hypothetical protein OsJ_13349 [Oryza sativa Japonica Group]
Length = 750
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/581 (66%), Positives = 479/581 (82%), Gaps = 1/581 (0%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDF++GLR IGV P+EK++LF+DNSCRWLVADQG++ATGAINVVRG+RSS EEL
Sbjct: 143 QLEQEILDFSQGLRAIGVAPDEKIALFADNSCRWLVADQGIMATGAINVVRGTRSSDEEL 202
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
IY HSES+AL V++P+FFNR+AE+ S+ RFI+LLWG+KS + ++V IP++ +
Sbjct: 203 FQIYTHSESIALVVDSPQFFNRLAESFISRINARFIVLLWGEKSCLNSEVVNGIPLYDFK 262
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I LGRESR S++ + +ETI DD+AT +YTSGT+G PKGVMLTH+NLLHQI
Sbjct: 263 DITQLGRESRNTLRHSHEQGQQVVFETITPDDVATLIYTSGTSGTPKGVMLTHRNLLHQI 322
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++L+D VPA GD+FLSMLPPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP Y+
Sbjct: 323 KNLWDFVPAVPGDRFLSMLPPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQYI 382
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+SVPLVYE LYS IQ+QI +SS AR+ VA ALI+IS Y KRIYEG L+ N +PS+
Sbjct: 383 VSVPLVYEILYSSIQRQISSSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKPSF 442
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+V +++WL ARI+ A+LWPLH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAI
Sbjct: 443 IVYMVNWLSARIVAALLWPLHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAI 502
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GVKVQ GYGLTE+SPV+AARRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+VKV
Sbjct: 503 GVKVQNGYGLTETSPVVAARRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVVKV 562
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNPSAT + LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKDTI
Sbjct: 563 RGPQVMKGYYKNPSATNKVLDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKDTI 622
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VL+TGENVEP E+EEAA RS LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+ +
Sbjct: 623 VLTTGENVEPAEIEEAASRSDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILDGN 682
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
+EL+K+K ++LLY ELR W CSFQIGPI +VDEPFTV+
Sbjct: 683 -NELAKDKVLNLLYDELRTWMVDCSFQIGPILIVDEPFTVD 722
>gi|357114733|ref|XP_003559149.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like
[Brachypodium distachyon]
Length = 709
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/581 (66%), Positives = 480/581 (82%), Gaps = 1/581 (0%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQ ILDF+ GLR +GV P+EKL+LF+DNSCRWLVADQG++ATGAINVVRG+RSS EEL
Sbjct: 102 QLEQHILDFSHGLRAVGVAPDEKLALFADNSCRWLVADQGIMATGAINVVRGTRSSDEEL 161
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
IY HSES+AL V++P+FFNR+AE+ + RF++LLWG KSS+ V++IPV+ Y+
Sbjct: 162 FQIYTHSESIALVVDSPQFFNRLAESFTLRINARFVVLLWGDKSSLNSKAVKDIPVYDYN 221
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I LGRE+R A +S++ + +E I +D+AT +YTSGT G PKGVMLTH+NLLHQI
Sbjct: 222 DITQLGRENRNAVHNSHEQGQQGVFEAITPEDVATLIYTSGTGGTPKGVMLTHRNLLHQI 281
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+L+DIVPA GD+FLSMLPPWH YER+ YFIF+ GI+ +YTAV+ LK+DLQRYQPHY+
Sbjct: 282 NNLWDIVPAVPGDRFLSMLPPWHAYERSTEYFIFTCGIQQVYTAVKYLKEDLQRYQPHYV 341
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLVYETLYS IQ+QI +SS AR+ +A ALI+IS Y K+IYEG L+ N +PS+
Sbjct: 342 ISVPLVYETLYSSIQRQISSSSTARKTLALALIKISLQYMESKKIYEGTVLSNNPVEPSH 401
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+V +++ LWARII A+LWP H LA+ LVYKKI S+IGISKAG+SGGGSLPMH+D F+EAI
Sbjct: 402 IVCMVNCLWARIIVALLWPFHNLAKLLVYKKIHSSIGISKAGISGGGSLPMHVDKFFEAI 461
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+KVQ GYGLTE+SPV+AARRP CNVLG+VGHP+ HTEIK+VD ET E LP GSKGIVK+
Sbjct: 462 GIKVQNGYGLTETSPVVAARRPFCNVLGTVGHPVKHTEIKVVDIETGEALPDGSKGIVKI 521
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G VM+GY+KNPSAT +ALD++GW NTGDIGW+APHH+ G SR+CGG+LVLEGRAKDTI
Sbjct: 522 KGPPVMKGYYKNPSATNKALDQEGWFNTGDIGWLAPHHTTGPSRKCGGMLVLEGRAKDTI 581
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VL+TGENVEP ELEEAA RS+LI+QI+VIGQD+RR GAIIVP+ +EVL AKR S + D
Sbjct: 582 VLTTGENVEPAELEEAAGRSNLIQQIMVIGQDRRRLGAIIVPNNDEVLATAKRKSRLDGD 641
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
+EL+K ++LLY ELR WT CSFQIGPI +VDEPFT++
Sbjct: 642 -NELAKATILNLLYDELRAWTVGCSFQIGPILIVDEPFTID 681
>gi|218194090|gb|EEC76517.1| hypothetical protein OsI_14303 [Oryza sativa Indica Group]
Length = 682
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/581 (64%), Positives = 457/581 (78%), Gaps = 40/581 (6%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQEILDF++GLR IGV P+EK++LF+DNSCRWLVADQG++ATGAINVVRG+RSS EEL
Sbjct: 114 QLEQEILDFSQGLRAIGVAPDEKIALFADNSCRWLVADQGIMATGAINVVRGTRSSDEEL 173
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
IY HSES+AL V++P+FFNR+AE+ S+ RFI+LLWG++
Sbjct: 174 FQIYTHSESIALVVDSPQFFNRLAESFISRINARFIVLLWGQQVV--------------- 218
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ETI DD+AT +YTSGT+G PKGVMLTH+NLLHQI
Sbjct: 219 ------------------------FETITPDDVATLIYTSGTSGTPKGVMLTHRNLLHQI 254
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++L+D VPA GD+FLSMLPPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP Y+
Sbjct: 255 KNLWDFVPAVPGDRFLSMLPPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQYI 314
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+SVPLVYE LYS IQ+QI +SS AR+ VA ALI+IS Y KRIYEG L+ N +PS+
Sbjct: 315 VSVPLVYEILYSSIQRQISSSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKPSF 374
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
+V +++WL ARI+ A+LWPLH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAI
Sbjct: 375 IVYMVNWLSARIVAALLWPLHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAI 434
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GVKVQ GYGLTE+SPV+AARRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+VKV
Sbjct: 435 GVKVQNGYGLTETSPVVAARRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVVKV 494
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+KNPSAT + LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKDTI
Sbjct: 495 RGPQVMKGYYKNPSATNKVLDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKDTI 554
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VL+TGENVEP E+EEAA RS LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+
Sbjct: 555 VLTTGENVEPAEIEEAASRSDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILDG- 613
Query: 595 ASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
++EL+K+K ++LLY ELR W CSFQIGPI +VDEPFTV+
Sbjct: 614 SNELAKDKVLNLLYDELRTWMVDCSFQIGPILIVDEPFTVD 654
>gi|108712074|gb|ABF99869.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 545
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/497 (65%), Positives = 402/497 (80%), Gaps = 1/497 (0%)
Query: 139 ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYK 198
E+ S+ RFI+LLWG+KS + ++V IP++ + +I LGRESR S++ +
Sbjct: 22 ESFISRINARFIVLLWGEKSCLNSEVVNGIPLYDFKDITQLGRESRNTLRHSHEQGQQVV 81
Query: 199 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 258
+ETI DD+AT +YTSGT+G PKGVMLTH+NLLHQI++L+D VPA GD+FLSMLPPWH
Sbjct: 82 FETITPDDVATLIYTSGTSGTPKGVMLTHRNLLHQIKNLWDFVPAVPGDRFLSMLPPWHA 141
Query: 259 YERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 318
YERA YFIF+ GI+ +YT V+ LK+DLQRYQP Y++SVPLVYE LYS IQ+QI +SS A
Sbjct: 142 YERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQYIVSVPLVYEILYSSIQRQISSSSTA 201
Query: 319 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 378
R+ VA ALI+IS Y KRIYEG L+ N +PS++V +++WL ARI+ A+LWPLH LA
Sbjct: 202 RKFVALALIKISLLYMEAKRIYEGTVLSNNPVKPSFIVYMVNWLSARIVAALLWPLHNLA 261
Query: 379 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYGLTE+SPV+AARRP C
Sbjct: 262 KTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGLTETSPVVAARRPFC 321
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
NVLG+VGHP+ HTEIK+VD ET EVLP GSKG+VKVRG QVM+GY+KNPSAT + LD++G
Sbjct: 322 NVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVVKVRGPQVMKGYYKNPSATNKVLDQEG 381
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
W +TGDIGWIAPH G SR+CGG+LVLEGRAKDTIVL+TGENVEP E+EEAA RS LI
Sbjct: 382 WFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAEIEEAASRSDLIN 441
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 618
QIVV+GQD+RR GA+IVP+ +EVL AKR SI+ + +EL+K+K ++LLY ELR W C
Sbjct: 442 QIVVVGQDKRRIGALIVPNYDEVLATAKRKSILDGN-NELAKDKVLNLLYDELRTWMVDC 500
Query: 619 SFQIGPIHVVDEPFTVN 635
SFQIGPI +VDEPFTV+
Sbjct: 501 SFQIGPILIVDEPFTVD 517
>gi|255559188|ref|XP_002520615.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540176|gb|EEF41751.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 571
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/435 (73%), Positives = 371/435 (85%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F ++LEQEIL+F+EGLR+I VKP EK++LF+DNSCRWLVADQG++A GAINVVRGSRSS
Sbjct: 130 FTYNQLEQEILNFSEGLRIIEVKPNEKIALFADNSCRWLVADQGIMAMGAINVVRGSRSS 189
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL IYNHSESVAL V++PE FNRIAETLCS A + FIILLWG+KS + ++ IPV
Sbjct: 190 VEELSQIYNHSESVALVVDSPELFNRIAETLCSNAVITFIILLWGEKSGLDIKGMDGIPV 249
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
F+Y +I+DLGRESRK DS+DA + Y YETI SDD+AT VYTSGTTGNPKGVMLTHKNL
Sbjct: 250 FNYKQIVDLGRESRKVLLDSDDAWRQYVYETISSDDVATLVYTSGTTGNPKGVMLTHKNL 309
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQI +L D+VPAE GD+FLSMLPPWH YERAC YFI + G+E ++T VRNLK+DL+ YQ
Sbjct: 310 LHQINNLLDVVPAEPGDRFLSMLPPWHAYERACEYFIMTLGVEQVFTTVRNLKEDLKHYQ 369
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PHYMISVPLVYETLYSGIQKQI TSS R++VA IR+S AY FKRIYEG LTR QK
Sbjct: 370 PHYMISVPLVYETLYSGIQKQISTSSTIRKLVALTFIRVSLAYMEFKRIYEGTYLTRIQK 429
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 410
QPSYL++L+D LWARI+ AIL P+H+LA+KLVY+KI AIGISKAG+SGGGSLPMH+D F
Sbjct: 430 QPSYLISLLDCLWARIMAAILLPVHMLAKKLVYRKIHLAIGISKAGISGGGSLPMHVDKF 489
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+EAIGVKVQ GYG+TESSPV AARRPTCNVLGS+GHPI HTE K+VDAET+E P GSKG
Sbjct: 490 FEAIGVKVQNGYGMTESSPVTAARRPTCNVLGSIGHPIRHTEFKVVDAETDEAFPDGSKG 549
Query: 471 IVKVRGSQVMQGYFK 485
IVKV+G QVM+GY+K
Sbjct: 550 IVKVKGPQVMKGYYK 564
>gi|357462833|ref|XP_003601698.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490746|gb|AES71949.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 512
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/444 (70%), Positives = 372/444 (83%), Gaps = 1/444 (0%)
Query: 193 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLS 251
A +HY +ETI DDIAT VYTSGTTGNPKGVMLTH+NLLHQI+ L D+VP E GDKFLS
Sbjct: 41 AGEHYIFETIKLDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTTEAGDKFLS 100
Query: 252 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 311
MLPPWH YERAC Y +FSRG+E +YT VRNLKDDL RY+PH M+SVPLV+ETLYSGI KQ
Sbjct: 101 MLPPWHAYERACEYLVFSRGLEHIYTTVRNLKDDLGRYKPHLMVSVPLVFETLYSGIMKQ 160
Query: 312 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 371
I TSS R++VA IR+S Y KRIYEG CLT+NQK PSYL A++DWLWARI+ IL
Sbjct: 161 ISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKAPSYLYAMLDWLWARIMATIL 220
Query: 372 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 431
+P+H+LA KLVY KI+S IGIS A +SGGGSLP H+D F+EAIG+ +Q GYGLTE+SPVI
Sbjct: 221 YPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFFEAIGLNLQNGYGLTETSPVI 280
Query: 432 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 491
AARR C+V+GSVG+P+ HTE K+VD+ET EVLP GSKGI+KVRG Q+M+GY+KNP AT
Sbjct: 281 AARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGILKVRGPQLMKGYYKNPLATN 340
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ +D DGWLNTGDIGWIA HHS GRSR GGV+V+EGRAKDTIVLS+GENVEP ELEEAA
Sbjct: 341 RVIDSDGWLNTGDIGWIAAHHSTGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEEAA 400
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 611
RS+LI+QIVVIGQD+RR GAIIVP+KEEVL AAK LSI+ +++S++S+EK SL+Y EL
Sbjct: 401 TRSNLIQQIVVIGQDKRRLGAIIVPNKEEVLKAAKELSIIDSNSSDVSQEKVTSLIYNEL 460
Query: 612 RKWTSKCSFQIGPIHVVDEPFTVN 635
R WTS FQIGPI +V++PFT++
Sbjct: 461 RTWTSGFPFQIGPILLVNDPFTID 484
>gi|302775100|ref|XP_002970967.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
gi|300160949|gb|EFJ27565.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
Length = 616
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 312/608 (51%), Positives = 425/608 (69%), Gaps = 35/608 (5%)
Query: 29 RNCVDAVATRIRI--SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSC 86
R+C + R+ + RR+ R+ ++E+ IL+FAE +R +GV P+E ++LF+DNSC
Sbjct: 10 RSCSERYGKRVALVDPRRDPPIRM-TYLQVEEAILNFAEAMRSLGVSPDEHVALFADNSC 68
Query: 87 RWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAA 146
RWL+ADQG++A GA N VRGSRSS EEL++I HS+SVAL ++ PE R+ +
Sbjct: 69 RWLIADQGIMAMGAANAVRGSRSSDEELVYILKHSDSVALVIDTPELLKRLEARFNDSLS 128
Query: 147 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 206
++F++LLWG+K P+ PVF+Y+E I LG++SR+ ++ + + S D
Sbjct: 129 LKFVVLLWGQK----PESFA-FPVFTYEECISLGQKSREKPGTTS--------KILWSFD 175
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 266
+AT VYTSGTTGNPKGVMLTH N++HQ++ L + GD+FLS+LPPWH+YER YF
Sbjct: 176 VATIVYTSGTTGNPKGVMLTHANIIHQMKYLDQCIQPVPGDRFLSLLPPWHMYERVAEYF 235
Query: 267 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
F+RGIE +YT+V+ LKDDLQ Y Y +SVPLVY+TLYSG+QKQ+ +S RR +
Sbjct: 236 TFTRGIEQVYTSVKFLKDDLQAYPTQYFVSVPLVYDTLYSGVQKQLSKASGLRRALVMGF 295
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
+ IS + KRI EG LTR ++ P+ L + A ++ IL PLH L +K+V+ KI
Sbjct: 296 MAISSFFKDLKRISEGRSLTRAREHPNRLECFL----AGVMAMILSPLHFLGDKIVFSKI 351
Query: 387 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
++AIGI KAG+SGGGSLP H+D F+E +G+ + GYGLTESSPV++ R + NVLG+VG
Sbjct: 352 RAAIGIRKAGISGGGSLPKHVDKFFEVVGITLLNGYGLTESSPVVSTRAFSDNVLGTVGM 411
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
P+ TE+KIVD E+ + L G+KGIV VRG QVM+GY+KNP AT++A+D DGWL+TGD+G
Sbjct: 412 PLRETEVKIVDPESRKTLANGNKGIVTVRGPQVMKGYYKNPDATQKAIDGDGWLDTGDLG 471
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
W+AP G +R+CGG+LVLEGRAK+TIVLSTGENVEP E+EEAAL+SSLI QI+V+GQD
Sbjct: 472 WVAPVWKTGAARKCGGMLVLEGRAKETIVLSTGENVEPTEIEEAALQSSLIDQIMVVGQD 531
Query: 567 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 626
QRR GA+IV K+ +A L SL+ EL++ TS CSFQIGP
Sbjct: 532 QRRLGALIVASKDTAATSANDLK---------------SLVREELQRCTSSCSFQIGPFV 576
Query: 627 VVDEPFTV 634
+V+EPFT+
Sbjct: 577 IVNEPFTM 584
>gi|302757391|ref|XP_002962119.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
gi|300170778|gb|EFJ37379.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
Length = 617
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 313/609 (51%), Positives = 422/609 (69%), Gaps = 36/609 (5%)
Query: 29 RNCVDAVATRIRI--SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSC 86
R+C + R+ + RR+ R+ ++E+ IL+FAE +R +GV P+E ++LF+DNSC
Sbjct: 10 RSCSEKYGKRVALVDPRRDPPVRM-TYLQVEEAILNFAEAMRSLGVSPDEHVALFADNSC 68
Query: 87 RWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAA 146
RWL+ADQG++A GA N VRGSRSS EEL++I HS+SVAL ++ PE R+ +
Sbjct: 69 RWLIADQGIMAMGAANAVRGSRSSDEELVYILKHSDSVALVIDTPELLKRLEARFNDSLS 128
Query: 147 MRFIILLWGKK-SSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSD 205
++F++LLWG+K S A PVF+Y+E I LG++SR+ ++ I
Sbjct: 129 LKFVVLLWGQKPESFA------FPVFTYEECISLGQKSREKPGTTSAL-------PIQPQ 175
Query: 206 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 265
D+AT VYTSGTTGNPKGVMLTH N++HQ++ L + GD+FLS+LPPWH+YER Y
Sbjct: 176 DVATIVYTSGTTGNPKGVMLTHANIIHQMKYLDQCIQPVPGDRFLSLLPPWHMYERVAEY 235
Query: 266 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 325
F F+RGIE +YT V+ LKDDLQ Y Y +SVPLVY+TLYSG+QKQ+ +S RR +
Sbjct: 236 FTFTRGIEQVYTTVKFLKDDLQAYPTQYFVSVPLVYDTLYSGVQKQLSKASGLRRALVMG 295
Query: 326 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 385
+ IS + KRI EG LTR ++ P+ L + A ++ IL PLH L +K+V+ K
Sbjct: 296 FMAISSFFKDLKRISEGRSLTRAKEHPNRLECFL----AGVMAMILSPLHFLGDKIVFSK 351
Query: 386 IQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
I++AIGI KAG+SGGGSLP H+D F+E +G+ + GYGLTESSPV++ R + NVLG+VG
Sbjct: 352 IRAAIGIQKAGISGGGSLPKHVDKFFEVVGITLLNGYGLTESSPVVSTRAFSDNVLGTVG 411
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
P+ TE+KIVD E+ + L G+KGIV VRG QVM+GY+KNP AT++A+D DGWL+TGD+
Sbjct: 412 MPLPETEVKIVDPESRKPLANGNKGIVTVRGPQVMKGYYKNPDATQKAIDGDGWLDTGDL 471
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
GW+AP G +R+CGG+LVLEGRAK+TIVLSTGENVEP E+EEAAL+SSLI QI+V+GQ
Sbjct: 472 GWVAPVWKTGAARKCGGMLVLEGRAKETIVLSTGENVEPTEIEEAALQSSLIDQIMVVGQ 531
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPI 625
DQRR GA+IV K+ +A L SL+ EL++ TS CSFQIGP
Sbjct: 532 DQRRLGALIVASKDTAATSANDLK---------------SLVREELQRCTSSCSFQIGPF 576
Query: 626 HVVDEPFTV 634
+V+EPFT+
Sbjct: 577 VIVNEPFTM 585
>gi|168043320|ref|XP_001774133.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674540|gb|EDQ61047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 672
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 293/584 (50%), Positives = 414/584 (70%), Gaps = 7/584 (1%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S++E+ IL+FAEGLR G++P + ++LF+DNS RWL+ADQG+LA GA+N VRGSRSS+EE
Sbjct: 64 SQVEEAILNFAEGLRAAGIQPNQTVALFADNSYRWLIADQGILAAGAVNAVRGSRSSAEE 123
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP---DIVEEIPV 170
LL+IY+HS+SVAL ++N E F ++A L A ++F++LLWG K S+ +++ P+
Sbjct: 124 LLYIYSHSDSVALVIDNAELFKKLAPMLRESAKVKFVVLLWGDKQSIVSTNGSFLKDTPI 183
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
++DE ++LG SR+ + S ++ +E I SDD AT VYTSGTTG PK VMLTH NL
Sbjct: 184 HTFDEFVELGEGSRE--TSSGGYYRNILHEKIHSDDTATLVYTSGTTGKPKAVMLTHGNL 241
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ+ +L+ ++ G +FL++LPPWH+YER+C YF SRG+ +YT+V++LK+DL Y+
Sbjct: 242 LHQVINLWSVIQPSPGQRFLTILPPWHMYERSCEYFYLSRGVNHVYTSVKSLKEDLVLYK 301
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P Y ++VPLV++ LY+G+QKQ+ ++ R+ +A ALI IS Y KR+ +G L +K
Sbjct: 302 PDYFVAVPLVFDLLYNGVQKQLNAATGFRKTLAMALISISTKYMDAKRVAQGRDLASARK 361
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 410
+ A +WL A ++ +IL PLHL+ + LV+KKI++ + + A +SGGGSLP H+D F
Sbjct: 362 KQPIFTAAKEWLAAMVVMSILLPLHLITKLLVFKKIRATLTMGTA-ISGGGSLPTHVDKF 420
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+E IG+ V GYGLTE+SPV++ R P N+LGSVG PI T +KIVD ETN L G KG
Sbjct: 421 FEMIGIPVLNGYGLTETSPVLSCRLPYNNILGSVGIPIPGTRVKIVDPETNRQLGPGIKG 480
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+VK G Q+M+GY+K ATK+A+D +GW +TGD+GWIAP G +RRCGGVL+L+GRA
Sbjct: 481 LVKASGPQIMKGYYK-AKATKKAIDPEGWFDTGDLGWIAPKMGIGCARRCGGVLILDGRA 539
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
KDTIVLSTGENVEP E+EE +SSLI+ IVV+GQDQRR GA++V +K+E+ AAK
Sbjct: 540 KDTIVLSTGENVEPTEIEEVMSQSSLIQNIVVLGQDQRRLGALVVANKDELYAAAKERMQ 599
Query: 591 VHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 634
+ +E S + + ELR + + CS + ++ EPFTV
Sbjct: 600 AKGNTAEPSDADLRACIREELRTYGAGCSHSVATFEILYEPFTV 643
>gi|168050144|ref|XP_001777520.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671138|gb|EDQ57695.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 778
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/582 (51%), Positives = 417/582 (71%), Gaps = 3/582 (0%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LEQ ILDFAEGLRV G++P++ +SLF+DNS RWL++DQG++A GA+ VRGSRSS++EL
Sbjct: 164 QLEQSILDFAEGLRVCGIRPDQHMSLFADNSHRWLISDQGIMAAGAVAAVRGSRSSTDEL 223
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE--EIPVFS 172
HI HS+SVAL V+N E +N+IA+ L ++F+I+LW K ++ D+ + E+P +S
Sbjct: 224 YHIVTHSDSVALVVDNLEIYNKIADRLKGNTVIKFVIVLWTSKDTLK-DLKDGSEVPFYS 282
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+DE++ GR SR+A + + + + + I DD+AT VYTSGTTGNPKGVMLTH NLLH
Sbjct: 283 FDELMASGRTSRQALAAVASSGERVQCDVIHPDDVATLVYTSGTTGNPKGVMLTHANLLH 342
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 292
QI L +V GD+FLS+LPPWH+YER+ YF SRG+ +YT+V+ LK+DL RY P
Sbjct: 343 QIVHLGSVVQPGPGDRFLSLLPPWHMYERSAEYFALSRGVSQVYTSVKTLKEDLARYPPD 402
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
Y ++VPLV++ LYSG+QKQI S R+ +A L+ +S + KR EG +T+ ++
Sbjct: 403 YFVAVPLVFDILYSGVQKQIAAGSKFRKQIALTLLSLSLKFVDIKRKQEGRDVTKGRESF 462
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 412
S + A W A I +L P HLLA+KLVY KI ++IGI KA +SGGGSLP ++D F+E
Sbjct: 463 SPVAAAKVWAIATIGALLLLPFHLLAQKLVYSKILASIGIKKAAISGGGSLPPYVDRFFE 522
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG++V GYGLTE+SPV++ R P+ NVLG+VG PI TEIK+VD + ++P G KG V
Sbjct: 523 AIGIRVLNGYGLTETSPVVSCRLPSNNVLGTVGGPIPETEIKVVDPNSGNIVPPGIKGSV 582
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
K+RG QVM+GY+KNP+AT +A+D DGW TGD+GW P G +R CGG+LVL+GRAKD
Sbjct: 583 KIRGPQVMKGYYKNPAATSKAIDSDGWFETGDLGWKVPSSPVGPARMCGGLLVLDGRAKD 642
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVLSTGENVEP E+EEA ++S LI+ ++++GQD+RR GA+IV +KEE+ A K +
Sbjct: 643 TIVLSTGENVEPQEIEEAIMQSKLIQNVMLVGQDKRRLGALIVGNKEELEAAVKEYKLAK 702
Query: 593 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 634
D+S+ K +++ E+ + + S+ +GP +++E FT+
Sbjct: 703 GDSSKPIKSDRTNVIRREINRLLANSSWPVGPFALIEESFTI 744
>gi|357462837|ref|XP_003601700.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490748|gb|AES71951.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 522
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/386 (72%), Positives = 327/386 (84%), Gaps = 1/386 (0%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LE ILDFAEGLRVIGV P EK++LF+DNSCRWLVADQGM+ATGAINVVRGSRSS EEL
Sbjct: 134 QLEDAILDFAEGLRVIGVSPNEKIALFADNSCRWLVADQGMMATGAINVVRGSRSSIEEL 193
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L IYNHSES+ALAV+NPE FNRIA+ KA+MRF+ILLWG+KS + + +E+P+F++
Sbjct: 194 LQIYNHSESIALAVDNPEMFNRIAKAFDLKASMRFVILLWGEKSCLVNEGSKEVPIFTFT 253
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
EI+ LGR SR+ F +S+DARKHY +E I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI
Sbjct: 254 EIMHLGRGSRRLF-ESHDARKHYVFEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQI 312
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
+ DIVPAE GD+FLSMLPPWH YERAC YFIFS G++ +YT VRNLKDDL+RYQPHY+
Sbjct: 313 KFYSDIVPAEVGDRFLSMLPPWHAYERACEYFIFSCGVDQVYTTVRNLKDDLERYQPHYL 372
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVPLVYE+LYSGIQ+QI TSS R++VA IR+S Y KRIYEG CLT+NQK PSY
Sbjct: 373 ISVPLVYESLYSGIQRQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKSPSY 432
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 414
L A++DWL ARII IL+P+H+LA+KLVY KI SAIG SKAG+SGGGSLP H+D F+EAI
Sbjct: 433 LYAMLDWLGARIIATILFPIHMLAKKLVYSKIHSAIGFSKAGISGGGSLPSHVDRFFEAI 492
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNV 440
GV +Q GYGLTE+SPVIAARR +CNV
Sbjct: 493 GVTLQNGYGLTETSPVIAARRLSCNV 518
>gi|62321026|dbj|BAD94085.1| A6 anther-specific protein [Arabidopsis thaliana]
Length = 402
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/384 (69%), Positives = 320/384 (83%), Gaps = 10/384 (2%)
Query: 252 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 311
MLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQ
Sbjct: 1 MLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQ 60
Query: 312 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 371
I SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+L
Sbjct: 61 ISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALL 120
Query: 372 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 431
WPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+
Sbjct: 121 WPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVV 180
Query: 432 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 491
AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TK
Sbjct: 181 CARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTK 240
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
Q L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA
Sbjct: 241 QVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAA 300
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 611
+RS +I QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y EL
Sbjct: 301 MRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQEL 350
Query: 612 RKWTSKCSFQIGPIHVVDEPFTVN 635
RKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 351 RKWTSECSFQVGPVLIVDDPFTID 374
>gi|147784541|emb|CAN68253.1| hypothetical protein VITISV_043922 [Vitis vinifera]
Length = 929
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/350 (66%), Positives = 273/350 (78%), Gaps = 9/350 (2%)
Query: 288 RYQPHYMISVPLVYETLYSGI--QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
+Y H + + E L +G+ + T ++ + L + F G L
Sbjct: 559 KYTKHVEVDKHFIKEKLENGLIFMAYVLTVEQVVDILTKGLPKKQFDDL-------GKFL 611
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPM 405
++QKQ SY+ ++ DWLWA+II AILWP+H+L +KL+Y KI SAIGISKAGVSGGGSLP
Sbjct: 612 QKSQKQYSYIASIFDWLWAKIIAAILWPVHMLGKKLIYSKIHSAIGISKAGVSGGGSLPS 671
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
H+D F+EAI +KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP
Sbjct: 672 HVDRFFEAIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLP 731
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
GSKGIVKV+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+V
Sbjct: 732 PGSKGIVKVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIV 791
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
LEGRAKDTIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AA
Sbjct: 792 LEGRAKDTIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAA 851
Query: 586 KRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
KR SI++A+ SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 852 KRXSILNANTSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 901
>gi|428780585|ref|YP_007172371.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
gi|428694864|gb|AFZ51014.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
Length = 636
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/527 (45%), Positives = 337/527 (63%), Gaps = 35/527 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+L ++I+ FA GL+ G+KP+ K++LF+DNS RW +ADQG++ GAINVVR S++ E
Sbjct: 48 QELNEKIIQFATGLQTQGIKPDTKIALFADNSPRWFIADQGIMKAGAINVVRSSQADVTE 107
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L++I S+S AL VE+ + ++ L S+ + F+ILL + +A I VF++
Sbjct: 108 LIYILTDSDSTALVVEDQKTLEKLQSQL-SELPIEFVILLSDETVEIAG-----IKVFNF 161
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+II+LG E +F +D+AT +YTSGTTG PKG ML+H N LHQ
Sbjct: 162 SQIIELGTEQELSFVPRE------------INDLATLIYTSGTTGKPKGAMLSHGNFLHQ 209
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+R+L D++ + GD+ LS+LP WH YERA YF+ +RG ++ YT +R K DL+ +P+Y
Sbjct: 210 VRTLGDVIQPQAGDRVLSILPSWHAYERAAEYFLLARGCQITYTNLRAFKKDLKEQKPNY 269
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+ VP ++E++Y GIQK + + ++ + + IS Y KRI E CL +
Sbjct: 270 MVGVPRLWESVYDGIQKTLNQQTGTKKKLVNFFLNISDRYIKAKRINERLCLE------N 323
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ ++ + L A + ++L PLH L +K+VY ++ A G + KA +SGGGSL +ID FYE
Sbjct: 324 FNPSVTEKLTASVQQSLLEPLHNLGDKVVYNTVREATGGNLKAVISGGGSLAKYIDDFYE 383
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+G+ + VGYGLTE+SPV ARR N+ GS G I TE KIVD ET L G KG+V
Sbjct: 384 VVGIPLLVGYGLTETSPVTHARRLYHNLRGSAGQAIPETETKIVDPETKASLNDGEKGLV 443
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+RG+QVMQGY+K P AT +A+D++GW NTGD+GWI P G LVL GRAKD
Sbjct: 444 MIRGTQVMQGYYKQPEATAKAIDQEGWFNTGDLGWITPT----------GDLVLTGRAKD 493
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
TIVLS GEN+EP LE+A LRS I QI+V+GQDQR GA+IVP+ E
Sbjct: 494 TIVLSNGENIEPQPLEDACLRSVYIDQIIVLGQDQRCLGALIVPNVE 540
>gi|427727828|ref|YP_007074065.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
gi|427363747|gb|AFY46468.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
Length = 658
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/598 (41%), Positives = 373/598 (62%), Gaps = 50/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L +I FA GL+ +GV+ +++SL +DNS RW +ADQG++ G ++ VR S++ EE
Sbjct: 65 TQLAAKIQQFAAGLQALGVQAGDRISLIADNSPRWFIADQGIITAGGVDAVRSSQAEREE 124
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL+I HS S AL VE+ + +++ E L + + F++LL S AP E + + +Y
Sbjct: 125 LLYIVAHSGSTALVVEDLKTLHKLRERL-NDLPINFVVLL----SEEAPPAAETLRILNY 179
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++++LG A + +D++AT +YTSGTTG PKGVML+H NLLHQ
Sbjct: 180 EQLLELG------------ANHKLVKVKLAADNLATLIYTSGTTGKPKGVMLSHSNLLHQ 227
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+++L +V + GD LS+LP WH YER+ YF+ S+G +YT +R++K DL+ ++P++
Sbjct: 228 VKTLGTVVQPQPGDMVLSILPTWHSYERSGEYFLLSQGCTQVYTNLRSVKKDLKDFKPNF 287
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
MI+VP ++E++Y G+QKQ A ++ + +L+ S Y KRI +G L
Sbjct: 288 MIAVPRLWESIYEGVQKQFREQPAKKQRLIYSLLGASERYIKAKRIAQGLSLDHLH---- 343
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
V+ + L ARII + L+PLH L E+LVY K++ A G K +SGGG+LP HID F+E
Sbjct: 344 --VSSMGRLGARIIASALFPLHALGERLVYGKVREATGGRIKQVISGGGALPRHIDNFFE 401
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
IGV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIVD ET + L AG +G+V
Sbjct: 402 IIGVEILQGYGLTETSPVTNARRPWHNLRGSSGQPIPGTEVKIVDPETRQPLAAGKRGLV 461
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+RG QVMQGY++NP AT + +D +GW N+GD+GWI P++ LVL GRAKD
Sbjct: 462 LLRGPQVMQGYYQNPEATAKVIDAEGWFNSGDLGWITPYND----------LVLTGRAKD 511
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV---LMAAKRLS 589
TIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A R
Sbjct: 512 TIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRCIGALIVPNLEALEKWAEAQNRTL 571
Query: 590 IVHADASELSKEKTIS--------LLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
I + S +TI+ L EL R+ ++ + ++GP ++ EPF++
Sbjct: 572 ITEDNNLTSSSGETITLESKMIQDLFRQELNREVQNRPGYRPDDRVGPFRLILEPFSI 629
>gi|428778235|ref|YP_007170022.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
gi|428692514|gb|AFZ45808.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
Length = 636
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/593 (43%), Positives = 364/593 (61%), Gaps = 47/593 (7%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I FA GL+ G++P+ K++LFSDNS RW +ADQG+L+ GA++VVR S++ EL
Sbjct: 49 QLNQKIKQFASGLQAQGIEPDTKIALFSDNSPRWFIADQGILSAGAVDVVRSSQADPAEL 108
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I S+S L VE+ + ++ L + ++ +ILL + EEIP ++
Sbjct: 109 AYILTDSDSKVLMVEDYKTLEKLQGELAN-LPIQLVILLSDETIES-----EEIPTLNFS 162
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ G + K + DD+AT +YTSGTTG PKG ML+H N LHQ+
Sbjct: 163 QLMAQGNQ------------KEFTLVPRKKDDLATLIYTSGTTGKPKGAMLSHGNFLHQV 210
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R++ D++ + GD+ LS+LP WH YERA YF+ SRG L+YT +R+ K DL+ +P+YM
Sbjct: 211 RAIGDVIQPQAGDRVLSILPSWHAYERAAEYFLLSRGCHLIYTNLRSFKKDLREQKPNYM 270
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP ++E++Y GIQK + + ++ + + IS Y KRI EG L +PS
Sbjct: 271 VGVPRLWESVYDGIQKNLNQQTGNKKKLIDFFLSISNRYLKTKRISEGLDL--ENLRPS- 327
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
LI L A C++L PLH L +K+VY+ ++ A G + KA +SGGG+L HID FYE
Sbjct: 328 ---LIAKLTASSQCSVLKPLHNLGDKIVYQTVREATGGNLKAVISGGGALAKHIDDFYEL 384
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+ + VGYGLTE+SPV ARR N+ GS G I TE KIVD ET + LP G KG+V
Sbjct: 385 IGIPLLVGYGLTETSPVTHARRLYHNLRGSSGPAIPETETKIVDPETKKSLPDGEKGLVM 444
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG+QVMQGY+K P AT +A+DE+GW NTGD+GWI P G LVL GRAKDT
Sbjct: 445 IRGTQVMQGYYKKPEATAKAIDEEGWFNTGDLGWITPT----------GDLVLTGRAKDT 494
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVLS GEN+EP LE A LRS I QI+V+GQDQR GA+IVP+ E + AK ++ +
Sbjct: 495 IVLSNGENIEPQPLENACLRSIYIDQIMVVGQDQRCLGALIVPNVEILEQWAKDHNL-NL 553
Query: 594 DASELSKEKTIS------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 635
D +E E+T++ L EL + + +IG ++ EPF+++
Sbjct: 554 DFAEGQLEETLANSQIQKLFRDELNREVKNRPGYRIDDRIGVFKLILEPFSMD 606
>gi|434387011|ref|YP_007097622.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
gi|428018001|gb|AFY94095.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
Length = 665
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/603 (40%), Positives = 366/603 (60%), Gaps = 71/603 (11%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
FA GL+ +G+KP+ ++LF+DNS RWL+ADQG++ TGA N VR S++ +ELL I ++S+
Sbjct: 73 FATGLQSLGIKPQTGVALFADNSPRWLIADQGIMTTGAFNAVRSSQAEVQELLSILDNSQ 132
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV--FSYDEIIDLG 180
+ L VE+ + N++++ L + ++ IILL + + V E+P+ ++ + IDLG
Sbjct: 133 AQTLVVEDLKTLNKLSDRL-ADLPIKLIILLCDETTDV------ELPIKLLNFSQTIDLG 185
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
R ++ ++ TI D+AT +YTSGT+GNPKGVMLTH NLLHQI + +
Sbjct: 186 RSAQ------------FQPATIAKTDLATLIYTSGTSGNPKGVMLTHANLLHQINTCGTV 233
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
+PA G + LS+LP WH YER+C Y++ S+G YT +R K DL+ YQP Y+++VP +
Sbjct: 234 IPATPGSRVLSILPSWHSYERSCEYYLLSQGCTQTYTNIRYFKQDLKEYQPEYLVAVPRL 293
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL-----TRNQKQPSYL 355
E++Y GIQKQ ++ + L+ +S Y +RI +G L T QK
Sbjct: 294 SESIYEGIQKQFREQPPNKQKLVARLLALSTKYIEARRIVQGLSLECLNPTLGQK----- 348
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
L AR+ AIL P+H +A+KL+Y KI++A G + +SGGGSL H+DLF+E I
Sbjct: 349 ------LIARLQMAILAPIHAIADKLIYSKIRAATGGKIRYIISGGGSLAKHLDLFFEII 402
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV + VGYGLTE++P+ RRP N+ S G P+ TEI+IVD +T + + G KG+V +
Sbjct: 403 GVNILVGYGLTETAPITNVRRPWQNLRLSSGQPLPGTEIRIVDVDTRQPVAIGQKGLVMI 462
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVMQGY+++P AT +A+D DGW N+GD+G + P++ L + GRAKDTI
Sbjct: 463 RGPQVMQGYYRDPEATAKAIDVDGWFNSGDLGMLTPNND----------LTITGRAKDTI 512
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--------LMAAK 586
VLS GEN+EP +E+A LRSS I QIV++GQDQ+ GA+IVP+ E + L+ A
Sbjct: 513 VLSNGENIEPTPIEDACLRSSYISQIVLVGQDQKALGALIVPNSEALHQWAISQNLIPAP 572
Query: 587 RLSIVHADASE----------LSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEP 631
+ A ++E L+ + I L EL + + +I I ++ EP
Sbjct: 573 IAATNPASSNEPNILLDNPQILNNTQVIDLFRDELNREVKNRPGYRIDDRIATIKLIAEP 632
Query: 632 FTV 634
F++
Sbjct: 633 FSI 635
>gi|443327638|ref|ZP_21056258.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
gi|442792730|gb|ELS02197.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
Length = 640
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/530 (45%), Positives = 337/530 (63%), Gaps = 38/530 (7%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I A GL+ +GV +K++LF+DNS RWL+ADQG++ G ++VVR + +EL
Sbjct: 47 ELYQKIQCCAAGLQALGVSSGDKIALFADNSPRWLIADQGIMMAGGVDVVRSGSAEQQEL 106
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L+IY +S+S +L VEN + NR++ + +++FIILL EEIP S
Sbjct: 107 LYIYENSDSSSLIVENLKTLNRLSPQI-EALSLKFIILLSD----------EEIPTSSST 155
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDD--IATYVYTSGTTGNPKGVMLTHKNLLH 232
+I++ FS + ++ + D +AT +YTSGTTG PKGVML+H NLLH
Sbjct: 156 KILN--------FSQLLELGSNHSLAKVTQDKSTLATLIYTSGTTGKPKGVMLSHGNLLH 207
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 292
Q+ +L I+ E GD+ LS+LP WH YER+ Y++ S+G YT +R+LK DL+ YQPH
Sbjct: 208 QVNNLRQIILCEQGDRVLSILPSWHAYERSAEYYLLSQGCTQYYTNLRSLKSDLKTYQPH 267
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
YMI VP ++E+LY G+QKQ + ++ + +S Y +R+ G L + QP
Sbjct: 268 YMIGVPRLWESLYEGVQKQFREQAPTKQKLINWFFNLSQKYVMARRLSRGLDL--DNLQP 325
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
S + L +A + L PLHLL +K+VY+K++ A+G K VSGGGSL H+D FY
Sbjct: 326 SAIAKL----FATLQTFALLPLHLLGDKIVYQKVRDAVGGKVKTFVSGGGSLAKHLDDFY 381
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
E + + V VGYGLTE++PV AR N + G PI TEIKIV+ ET E LP G+KG+
Sbjct: 382 ELVNIPVLVGYGLTETAPVTNARTLDRNFSKTSGQPIAETEIKIVNPETKEALPTGAKGL 441
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V +RGSQVMQGY+KNP AT +A+D +GW ++GD+GW+ P + LVL GRAK
Sbjct: 442 VLIRGSQVMQGYYKNPEATAKAIDAEGWFDSGDLGWVTPDND----------LVLTGRAK 491
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
DTIVL+ GEN+EP +E+A +RSS I QI+++GQDQR GA+IVP+ E V
Sbjct: 492 DTIVLTNGENIEPQPIEDACIRSSYIDQIMLVGQDQRALGALIVPNLETV 541
>gi|414079435|ref|YP_007000859.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
gi|413972714|gb|AFW96802.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
Length = 654
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/597 (41%), Positives = 375/597 (62%), Gaps = 53/597 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPE--------EKLSLFSDNSCRWLVADQGMLATGAINVVR 105
S+L +I FA GL+ +G+ E++SL +DNS RW +ADQG++ GA+N VR
Sbjct: 65 SQLSGQIQQFAAGLQTLGININNSDTLPYGERVSLIADNSPRWFIADQGIMTAGAVNAVR 124
Query: 106 GSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV 165
+++ EELL+I +HS S AL +E+ + N++ E+L ++ ++ ++LL S AP
Sbjct: 125 SAQAEREELLYIISHSGSTALVIEDLKTLNKLGESL-NELPIKLVVLL----SDEAPPTE 179
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
PV ++ +++D+G SN+ K S+ +AT +YTSGTTG PKGVML
Sbjct: 180 RNFPVVNFSQLLDIG---------SNNTLIATKQ---SSESLATLIYTSGTTGKPKGVML 227
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
+HKNLLHQ++SL +V + GD LS+LP WH YER+ YF+ S+G +YT +R++K D
Sbjct: 228 SHKNLLHQVKSLGVVVQPKKGDTVLSILPTWHSYERSGEYFLLSQGCTQIYTNLRSVKGD 287
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L++++P+YMI+VP ++E++Y G+QKQ A ++ + + L+ S Y +RI +G L
Sbjct: 288 LKKFKPNYMIAVPRLWESIYEGVQKQFREQPAKKQSLVKFLLETSQKYIEARRICQGLSL 347
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
N S+ I+ A+I L H L EKLVY K++ A G + K +SGGG+LP
Sbjct: 348 --NHIHASF----IERSQAKITELGLLLFHALGEKLVYTKVREATGGNIKHVISGGGALP 401
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+ID F+E +GV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIV+ ET + L
Sbjct: 402 AYIDNFFEIVGVEILQGYGLTETSPVTNARRPWRNLRGSSGQPIPGTEVKIVNPETRQPL 461
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
P G +G+V ++G Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + L
Sbjct: 462 PVGERGLVLLKGPQIMQGYYQNPEATTKAIDTEGWFDSGDLGWVTPEND----------L 511
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
VL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ L A
Sbjct: 512 VLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPN----LEA 567
Query: 585 AKRLSIVHADASELSKEKTI--SLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
++ + ++ ++ E I L EL R+ ++ S+ ++GP +++E F++
Sbjct: 568 LEKWAETQNNSQKIDLESKIVQDLFRQELNREVQNRPSYRADDRVGPFKLIEEEFSI 624
>gi|218245215|ref|YP_002370586.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 8801]
gi|257058247|ref|YP_003136135.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
gi|218165693|gb|ACK64430.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8801]
gi|256588413|gb|ACU99299.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
Length = 639
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/599 (40%), Positives = 364/599 (60%), Gaps = 50/599 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L Q+I +FA GL+ + VK K++LF+DNS RW +ADQG + GA N VR S++ +E
Sbjct: 44 AQLYQQIKNFAVGLQTLEVKLSSKVALFADNSPRWFIADQGSMMAGAANAVRSSQADKDE 103
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL+I S+S L V++ + ++ + ++ IILL S APD I ++
Sbjct: 104 LLYILADSDSTTLIVQDQKTLKKLRSGI-DDLPIQLIILL----SDEAPDQEAPIKTLNF 158
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++D G + A + T D +AT +YTSGTTG PKGVML+H NLLHQ
Sbjct: 159 QQLMDKGSQGTLAIA------------TQTKDSLATLIYTSGTTGQPKGVMLSHGNLLHQ 206
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ +L ++ + GD+ LS+LP WH YER+ YF+ S+G + YT++R K DL+R++PH+
Sbjct: 207 VTNLDSVIQPKPGDRVLSILPSWHSYERSAEYFLLSQGCTMTYTSIRTFKTDLKRFKPHH 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+ VP ++E+LY GIQKQ S R+ + + +S Y +RI + L
Sbjct: 267 MVGVPRLWESLYEGIQKQFREQSPTRQKLVEFFLNLSERYILAQRIAKNLSLEH------ 320
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + + L AR+ +L PLH+L +KL+Y KI+ +G + + VSGGGSL H+D+FYE
Sbjct: 321 FHASSFERLLARLQATLLSPLHILGDKLIYGKIRQGVGGNFETMVSGGGSLAKHLDMFYE 380
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+ + V VGYGLTE+SPV AR + N+ GS G P+ TEI IVD + ++LP G +G+V
Sbjct: 381 IVNLPVLVGYGLTETSPVTNARTHSHNIRGSSGQPVPETEICIVDPDNRQILPQGQRGLV 440
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRGSQVMQGY+K P AT++A+D DGW +TGD+GW+ P LV+ GRAKD
Sbjct: 441 LVRGSQVMQGYYKKPEATRKAIDPDGWFDTGDLGWLTPMQD----------LVITGRAKD 490
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK--RLSI 590
TIVLS GEN+EP +E+A +RS I Q++V+GQDQ+ GA+IVP+ + ++ AK +L++
Sbjct: 491 TIVLSNGENIEPQAIEDACIRSPYIDQMMVVGQDQKALGALIVPNLDALVTWAKSQQLTL 550
Query: 591 VHADA---------SELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTVN 635
DA S+L + SL EL R+ ++ + QI ++ EPF+++
Sbjct: 551 NLPDASASREEILHSDLYSQPVQSLFRQELSREVKNRPGYRPDDQIKTFELILEPFSID 609
>gi|434399935|ref|YP_007133939.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
gi|428271032|gb|AFZ36973.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
Length = 640
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 361/598 (60%), Gaps = 54/598 (9%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L +I FA GL+ +GV+P K++LF+DNS RW +ADQG++ GA NVVR + + +EL
Sbjct: 46 ELSVKINQFAAGLQALGVQPFAKVALFADNSPRWFIADQGIMMAGAANVVRSANAEQQEL 105
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L+I HS+S AL VEN + N++ ++ + I+LL S P I + +++
Sbjct: 106 LYILEHSDSSALVVENLKTLNKLGSSVAD-LPIELIVLL----SDETPQSELSIQIVNFE 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGS--DDIATYVYTSGTTGNPKGVMLTHKNLLH 232
++++ G K++ + + +++AT +YTSGTTG PKG ML+H NLLH
Sbjct: 161 QLMETG--------------KNHSLQPVQQTKENLATLIYTSGTTGKPKGAMLSHGNLLH 206
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 292
Q+ +L I+ A+ GD+ LS+LP WH YER+ YF+F++G L YT +R+LK DLQ+YQPH
Sbjct: 207 QVNNLTSIIKADVGDRVLSILPSWHAYERSAEYFLFAQGCTLYYTNLRSLKSDLQKYQPH 266
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
YM++VP ++E++Y G+QKQ +++ + I+ Y +RI EG L
Sbjct: 267 YMVAVPRLWESIYEGVQKQFREQPPSKQKLINYFFEIAEEYIEARRIAEGMSLEH----- 321
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
+++ L A+ ++L PL+ L +++V+KK++ A+G + K V+GGGSL H+D FY
Sbjct: 322 -LNLSVGARLLAKTKASLLLPLYNLGDRIVFKKVRQAVGSNVKTLVNGGGSLAKHLDDFY 380
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
E + + + VGYGLTE+SPV AR N G+ G PI TEIKIVD +T + LP G +G+
Sbjct: 381 EIVKIPLLVGYGLTETSPVTNARTLKHNFRGTAGKPIPETEIKIVDPQTRQTLPQGQQGL 440
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V +RG QVMQGY+KNP AT +A+D +GW ++GD+GW+ P + L+L GRAK
Sbjct: 441 VLIRGPQVMQGYYKNPEATAKAIDPEGWFDSGDLGWVTPDND----------LILTGRAK 490
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD-----------KEE 580
DTIVLS GEN+EP +E+A +RS I QI+++GQDQR GA+IVP+ K
Sbjct: 491 DTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQRALGALIVPNLDALQQWATNQKLN 550
Query: 581 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 633
+ + A S+ S+L + +L EL + +IG ++ EPF+
Sbjct: 551 LNLPAPNTSLAEISQSDLYSKPVQNLFRQELNSQVQNRPGYRADDRIGTFRLILEPFS 608
>gi|428320800|ref|YP_007118682.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
gi|428244480|gb|AFZ10266.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
Length = 649
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/595 (41%), Positives = 353/595 (59%), Gaps = 50/595 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEE------KLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+ L Q+I FA GL+ +G++P+ +++LF+DNS RWL+ADQG++ GA N VRG+
Sbjct: 63 TDLYQQIQQFAAGLQALGIEPDPGEAVPPRVALFADNSPRWLIADQGIMMAGAANAVRGA 122
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ EELL+I S S AL VEN ++ L ++ I+LL S P+
Sbjct: 123 TADPEELLYIIQDSGSTALVVENRALLKKLQHRLPD-LPIQLIVLL----SDEEPEASPT 177
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ + +++ G + + SN +K +T+ AT +YTSGTTG PKGVMLTH
Sbjct: 178 LNTVKFSQVMTTG--ANRPLKPSN-----HKPQTL-----ATLLYTSGTTGKPKGVMLTH 225
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 287
NLLHQ+ + I+ E G+ LS+LP WH YER YF+ S+G +YT++R K D +
Sbjct: 226 GNLLHQVTTFGTILQPEIGESALSILPSWHAYERTVEYFLLSQGCTQIYTSIRYFKQDFK 285
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
Y+P YMISVP ++E++Y +QKQ A ++ + L+ S Y +RI++G L+
Sbjct: 286 AYKPQYMISVPRIWESIYEAVQKQFREQPANKQKLVNFLLSASQQYIENRRIFQGLTLSL 345
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
S + L ARI +LWP+H LAEKLVY+K++ A G K +SGGGSL H
Sbjct: 346 KPASAS------EKLIARIKSILLWPVHALAEKLVYQKVREATGGRFKWAISGGGSLATH 399
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+D F+E + + VGYGLTE+SPV+ RRP N+ GS G PI TEIKIVD ET + LPA
Sbjct: 400 LDNFFEIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAGQPIAQTEIKIVDPETRQQLPA 459
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G +G+V RG Q+MQGY+ NP AT + +D +GW +TGD+GW+ P G L+L
Sbjct: 460 GQRGLVLARGPQIMQGYYLNPQATAKVIDPEGWFDTGDLGWLTP----------GNDLIL 509
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GRAKDTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ E V K
Sbjct: 510 TGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKSVGALIVPNAEAV---QK 566
Query: 587 RLSIVHADASELS-KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+ E+ KTI L+ EL + + +IGP ++ EPF++
Sbjct: 567 WAETQNPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRADDRIGPFRLIQEPFSI 621
>gi|126659901|ref|ZP_01731025.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
gi|126618765|gb|EAZ89510.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
Length = 638
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/601 (41%), Positives = 357/601 (59%), Gaps = 56/601 (9%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L Q+I FA GL+ +GV P++K+SL +DNS RW +ADQG + GA N VR +++ E
Sbjct: 44 AQLYQQIKQFASGLQALGVTPDDKISLIADNSPRWFIADQGSMLAGAANAVRSAQADKNE 103
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I S+S AL VEN + ++I + C + ++ IILL S P + I +Y
Sbjct: 104 IAYILRDSDSNALIVENQKTLDKI-RSFCDEIPLQLIILL----SDETPKADDTIKTLNY 158
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++++ G A+ T DD+AT +YTSGTTG PKG ML+H NLLHQ
Sbjct: 159 TQLMEEG------------AKHSLNPITKDEDDLATLIYTSGTTGQPKGAMLSHGNLLHQ 206
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+R+L ++ + GDK LS+LP WH YER+ YF+ S+G L+YT +RN K DL++++PH+
Sbjct: 207 VRNLNAVIQPQPGDKVLSILPSWHAYERSGEYFLLSQGCTLIYTNIRNFKTDLKKFKPHH 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+ VP ++++LY GIQKQ S ++ + IS + +RI L
Sbjct: 267 MVGVPRLWDSLYEGIQKQFREQSPTQQKIVEFFFNISRTFILSRRIANNMSLEH------ 320
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I+ AR+ ++L PLH L +KLVYKKI+ +G + + VSGGGSL H+D FYE
Sbjct: 321 FDASAIERSIARLKASLLAPLHSLGDKLVYKKIREGLGGNFETLVSGGGSLAKHLDDFYE 380
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
I V V VGYGLTE++PV AR + N+ GS G PI TEIKIVD +T E L G KG+V
Sbjct: 381 IINVPVLVGYGLTETAPVTNARTHSHNLRGSSGQPIPKTEIKIVDLDTREPLSQGKKGVV 440
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+RG Q+MQGY+K P AT +A++ +GW ++GD+GWI P + LV+ GRAKD
Sbjct: 441 LLRGPQIMQGYYKKPEATAKAINPEGWFDSGDLGWITPMND----------LVITGRAKD 490
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--------DKEEVLM- 583
TIVLS GEN+EP +E+A +RS I Q++++GQDQ+ GA+IVP DK + L
Sbjct: 491 TIVLSNGENIEPQPIEDACIRSPYIDQMMLVGQDQKALGALIVPNLDALQTWDKNQQLNL 550
Query: 584 -----AAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 633
A R +IV++D L + L EL + + QI ++ EPF+
Sbjct: 551 TFPPEDASREAIVNSD---LYGKPVQDLFKQELNREVKNRPGYRADDQIKAFELILEPFS 607
Query: 634 V 634
V
Sbjct: 608 V 608
>gi|254411063|ref|ZP_05024841.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182418|gb|EDX77404.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 655
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/558 (43%), Positives = 342/558 (61%), Gaps = 40/558 (7%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ Q+I FA GL+ +GV ++++LFS+NS RW VADQG++ TGA++VVR S++ EE
Sbjct: 63 AQMWQQIQQFAAGLQALGVSAGDRVALFSENSSRWFVADQGIMTTGAVDVVRSSQAEQEE 122
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL+I SE+ AL VEN + ++ + L ++ +ILL S PD E+ + ++
Sbjct: 123 LLYILKDSEATALVVENQDTLTKLDQHL-HDLPIQLVILL----SDQEPDAESELNILNF 177
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETI--GSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
++++ G K++ ++ I D +AT VYTSGTTG PKGVML+H NLL
Sbjct: 178 PQVLERG--------------KNHTFQPIEQAPDTLATLVYTSGTTGKPKGVMLSHGNLL 223
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 291
HQ+ SL IV E GD+ LS+LP WHVYERA YF S+G L+YT +R++K DL P
Sbjct: 224 HQVTSLGAIVQLEAGDRVLSILPTWHVYERAIEYFALSQGCTLIYTTLRHVKRDLNAQHP 283
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+Y +SVP + E++Y +QKQ+ SA ++ + L IS + +R+ G L +Q
Sbjct: 284 NYFVSVPRLLESIYETVQKQLSKESARKQRLVNILFSISDRFIKARRLVHGLSL--EHQQ 341
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
PS LWAR+ L +H+LA++ +Y+KI+ IG + K + GGG+L +D F
Sbjct: 342 PSGFQR----LWARLQWLTLVLIHVLADQFIYQKIREQIGANLKQTICGGGALSQKLDDF 397
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
YE IG++V GYGLTE+SPV+ ARR N+ GS G PI TEI+IVD +T E L G KG
Sbjct: 398 YEIIGIEVLEGYGLTETSPVLTARRSWHNLRGSAGKPILETEIRIVDPDTRETLLQGEKG 457
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+V RGSQ+MQGY++NP AT + +D GW NT D+GW+ LVL GRA
Sbjct: 458 LVWARGSQIMQGYYRNPEATDKVIDAQGWFNTEDLGWLTVQED----------LVLTGRA 507
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRL 588
KDTIVLS GENVEP +E A +RS I Q+VV+GQDQR GA+IVP D + A +
Sbjct: 508 KDTIVLSNGENVEPKPIENACMRSRYIDQMVVVGQDQRSLGALIVPNFDNLQGWAAENQY 567
Query: 589 SIVHADASELSKEKTISL 606
+ D S E+TI L
Sbjct: 568 HLQLPDGESASGEETIDL 585
>gi|422302727|ref|ZP_16390086.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
gi|389787971|emb|CCI16697.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
Length = 639
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/596 (41%), Positives = 353/596 (59%), Gaps = 49/596 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++ +EEL
Sbjct: 45 ELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQADAEEL 104
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I S+S L VEN + ++ + + ++ I+LL + + V+ ++
Sbjct: 105 AYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ---TLNFK 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ +G E+ K T +D+AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 161 QLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQV 208
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R+L I E GD+ LS+LP WH YER+C YFI ++G +YT++R K DL+++ P M
Sbjct: 209 RNLNAIFQPEPGDRVLSILPSWHSYERSCEYFILAQGCTQIYTSIRTFKQDLKQFSPQLM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L P
Sbjct: 269 VGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG- 327
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE
Sbjct: 328 -----ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEI 382
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD ++ EVLP G+V
Sbjct: 383 AGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLQSKEVLPTEKHGLVL 442
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAKDT
Sbjct: 443 IRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDT 492
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI--- 590
IVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 493 IVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKISLN 552
Query: 591 ---VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 633
H+D +S+L +K ++L EL++ + QI ++ EPF+
Sbjct: 553 LPDSHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRADDQIKTFELILEPFS 608
>gi|443321847|ref|ZP_21050887.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
gi|442788463|gb|ELR98156.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
Length = 633
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/590 (41%), Positives = 351/590 (59%), Gaps = 43/590 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L +I F GL+V+GV +K++L +DNS RW +ADQG++ G ++VVR S++ +EL+
Sbjct: 49 LNSQIKRFGAGLQVLGVTEGQKVALIADNSPRWFIADQGIMTAGGVDVVRSSQAEKQELI 108
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I S+S AL VEN + ++ L + IILL S A E + V ++ +
Sbjct: 109 YIIKDSDSTALVVENQKTLEKLRSDL-EDLPIALIILL----SEEAVSENESLKVLNFSQ 163
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
+++LG +S N A +AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 164 LMELGSQSTLTPVSRNRA------------SLATLIYTSGTTGKPKGVMLSHGNLLHQVN 211
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMI 295
+L I+ E GDK LS+LP WH YERA Y+I S+G +YT +RN K DLQ++QP++MI
Sbjct: 212 NLNTIIQPEPGDKVLSILPSWHSYERAAEYYILSQGCTQIYTNIRNFKQDLQKHQPNFMI 271
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
VP ++E++Y GIQKQ+ R+ + + + IS +Y +RI +G L + S
Sbjct: 272 GVPRLWESIYEGIQKQLREQPQKRQKLVKTCLEISESYILARRIAQGLSLEHLEANWS-- 329
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
D L A I L PLH +A++LVY+KI++ +G + + +SGGGSL MH++ FYE +
Sbjct: 330 ----DRLKAGIKATALAPLHQIADRLVYRKIRNGVGGNLRFLISGGGSLAMHLENFYEVV 385
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ + VGYGLTE+SPV AR+ N+ GS G P+ TEI+IVD ET + LP +G+V +
Sbjct: 386 GIPILVGYGLTETSPVTNARQIEHNLRGSAGKPLPETEIRIVDLETKQDLPKKKRGLVLL 445
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVMQGY+ P AT +A+D GW +TGDIGW+ C LVL GRAKDTI
Sbjct: 446 RGPQVMQGYYHQPEATAKAIDASGWFDTGDIGWLT----------CDQDLVLTGRAKDTI 495
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV----LMAAKRLSI 590
VL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + + + L
Sbjct: 496 VLTNGENIEPQPIEDACLRSPYIEQIMLVGQDQRALGALIVPNLEALQQWAIASGLNLDF 555
Query: 591 VHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 635
L+ T L EL + + +IG V EPF+++
Sbjct: 556 STPGTQALNDAATQELFRRELNREVQNRPGYRSDDRIGAFAFVLEPFSLD 605
>gi|67921002|ref|ZP_00514521.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|416380779|ref|ZP_11684127.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
gi|67857119|gb|EAM52359.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|357265616|gb|EHJ14357.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
Length = 638
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/560 (41%), Positives = 347/560 (61%), Gaps = 36/560 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L Q++ FA GL+ +GV P++K+SL +DNS RW +ADQG + GA N VR +++ E
Sbjct: 44 AELYQKLQQFAAGLQALGVSPDDKISLIADNSPRWFIADQGSMLAGAANAVRSAQADKNE 103
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I S+S L VEN + ++I + C + ++ IILL S P+ + I ++
Sbjct: 104 LAYIVRDSDSSTLIVENQKTLDKI-RSFCDEIPLQLIILL----SDETPNRDDPIKTLNF 158
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++++LG ++ ND D+AT +YTSGTTG PKG ML+H NLLHQ
Sbjct: 159 SQLMELGAKNSLQPVKKNDT------------DLATLIYTSGTTGQPKGAMLSHGNLLHQ 206
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+++L ++ + GD+ LS+LP WH YER+ YF+ S+G L+YT +RN K D++R++P +
Sbjct: 207 VKNLDAVIQPKVGDQVLSILPSWHSYERSAEYFLLSQGCTLVYTNIRNFKTDIKRFKPQH 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+ VP +++++Y GIQKQ+ S ++ +A+ IS + +RI + L
Sbjct: 267 MVGVPRLWDSIYEGIQKQLREKSDTQQKIAQFFFNISQNFILSRRIADNMSLEH------ 320
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + ID A++ L PLH L +KLVY KI+ +G + + +SGGGSL H+D FYE
Sbjct: 321 FDASAIDRFIAKLKTIFLAPLHGLGDKLVYSKIREGLGGNFETLMSGGGSLAKHLDDFYE 380
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
I V V VGYGLTE+SPV AR + N+ GS G PI HTEIKIVD +T E + G +G+V
Sbjct: 381 IINVPVLVGYGLTETSPVSNARTHSHNLRGSSGQPIPHTEIKIVDLDTGEAVSRGKRGVV 440
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+RG QVMQGY+K P AT +A+D +GW N+GD+GWI P + LV+ GRAKD
Sbjct: 441 LIRGPQVMQGYYKKPEATAKAIDPEGWFNSGDLGWITPMND----------LVITGRAKD 490
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GEN+EP +E+A +RS I Q++++GQDQ+ GA+IVP+ + + K +
Sbjct: 491 TIVLNNGENIEPQPIEDACVRSPYIDQMMLVGQDQKALGALIVPNLDALQTWGKNQQLNL 550
Query: 593 ADASELSKEKTI--SLLYGE 610
SE + +TI S LYG+
Sbjct: 551 TFPSEDASRETIINSDLYGK 570
>gi|428301191|ref|YP_007139497.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
gi|428237735|gb|AFZ03525.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
Length = 658
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/603 (40%), Positives = 372/603 (61%), Gaps = 52/603 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
VF +L ++I FA GL+ +G++ E++SL SDNS WLVADQG++ GA++ VRGS++
Sbjct: 61 VFTYKQLNEKICAFASGLQALGIQAGERISLISDNSPAWLVADQGIMMAGAVDAVRGSQA 120
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
EELL+I +S S AL +EN + ++ E L ++F ILL S P E +
Sbjct: 121 EREELLYIIANSGSTALVLENFKTLKKLREGL-DDLGIKFAILL----SEETPPPEESLK 175
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYET-IGSDDIATYVYTSGTTGNPKGVMLTHK 228
+ ++++II LG + H T + D+AT +YTSGTTG PKGVML H
Sbjct: 176 ILNFEQIITLGGQ-------------HTLIPTQLKRTDLATLIYTSGTTGKPKGVMLNHG 222
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 288
N++HQ+ SL +V E GD LS+LP WH YER+C YF+FS+G +YT++R++K+DL++
Sbjct: 223 NIMHQVTSLGSVVQPEKGDTVLSILPSWHSYERSCEYFLFSQGCMQIYTSLRSIKNDLKK 282
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
++P+Y+I+VP + E++Y G+QKQ +++ + + L IS Y +RI +G L +
Sbjct: 283 FKPNYIIAVPRLLESIYEGVQKQFREQPPSKQKLVKNLFAISEKYIKAQRIVQGVSL--D 340
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
QPS L D + A+I L PLH + EKLVY K++ A G K VSGGG+LP ++
Sbjct: 341 NFQPSVL----DKITAQIQSIFLAPLHAVGEKLVYGKVREATGGKVKQMVSGGGALPRYV 396
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
D F+E +GV++ VGYGLTE+SPV RR N+ G+ G I TE+KIV ET + + G
Sbjct: 397 DNFFEIVGVEIFVGYGLTETSPVTHVRRSWRNLRGAAGLAIPGTEVKIVHPETRKPIENG 456
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
+G+V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW++ + L+L
Sbjct: 457 QRGLVLLRGPQIMQGYYQNPEATAKAIDSEGWFDSGDLGWVSDKND----------LILT 506
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+
Sbjct: 507 GRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNLEALAKWAQE 566
Query: 588 LSI---VHADASELSKEKTIS--------LLYGEL-RKWTSKCSF----QIGPIHVVDEP 631
++ + D LS + I+ L EL R+ ++ + +I P ++ EP
Sbjct: 567 HNLDLCIQEDNVTLSGSQKINLESKIIQDLFRQELNREVQNRPGYRPDDRINPFRLILEP 626
Query: 632 FTV 634
F++
Sbjct: 627 FSM 629
>gi|390440993|ref|ZP_10229181.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
gi|389835698|emb|CCI33307.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
Length = 639
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/601 (40%), Positives = 353/601 (58%), Gaps = 49/601 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ +L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++
Sbjct: 40 ILTYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+EEL +I S+S L VEN + ++ T + ++ I+LL + + V+
Sbjct: 100 DAEELAYILADSDSQTLIVENNKTLGKLL-TKIPELPLKLIVLLTDEDPATGAISVQ--- 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ +++ +G E+ K T +D+AT +YTSGTTG PKGVML+H N
Sbjct: 156 TLNFKQLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGN 203
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+R+L I E GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++
Sbjct: 204 LLHQVRNLNAIFQPEPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQF 263
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 264 SPQLMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P + L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D
Sbjct: 324 ASPG------ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLD 377
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP
Sbjct: 378 TFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEK 437
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL G
Sbjct: 438 HGLVLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+
Sbjct: 488 RAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQ 547
Query: 589 SI------VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPF 632
I +H+D +S+L +K ++L EL++ + QI ++ EPF
Sbjct: 548 KISLNLPDLHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPF 607
Query: 633 T 633
+
Sbjct: 608 S 608
>gi|172036048|ref|YP_001802549.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC 51142]
gi|354552853|ref|ZP_08972160.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
gi|171697502|gb|ACB50483.1| probable long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC
51142]
gi|353554683|gb|EHC24072.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
Length = 638
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/598 (40%), Positives = 353/598 (59%), Gaps = 50/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L Q+I FA GL+ +GV P++K+SL +DNS RW +ADQG + GA N VR +++ E
Sbjct: 44 AQLYQQIKQFASGLQALGVTPDDKISLIADNSPRWFIADQGSMLAGAANAVRSAQADKNE 103
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I S+S L VEN + +++ + C + ++ IILL S P + I +Y
Sbjct: 104 LAYILRDSDSSTLIVENQKTLDKL-RSFCDEIPLQLIILL----SDETPKTDDSIKTLNY 158
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++++ G A + T DD+AT +YTSGTTG PKG ML+H NLLHQ
Sbjct: 159 SQLMEQG------------ANNTLQPITKEDDDLATLIYTSGTTGQPKGAMLSHGNLLHQ 206
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+++L I+ + GD LS+LP WH YER+ YF+ S+G L YT +RN K DL++++PH+
Sbjct: 207 VKNLDAIIQPKAGDIVLSILPSWHSYERSAEYFLLSQGCTLTYTNIRNFKTDLKKFKPHH 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+ VP ++++LY GIQKQ+ S ++ + + +S + +RI L
Sbjct: 267 MVGVPRLWDSLYEGIQKQLRDQSPTQQKIVQFFFNLSQTFILSRRIANNMSLEH------ 320
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + + AR+ ++L PLH L +KLVY KI+ +G + + VSGGGSL H+D FYE
Sbjct: 321 FDASGTERFIARLKASLLAPLHSLGDKLVYNKIREGLGGNFETLVSGGGSLAKHLDDFYE 380
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
I V V VGYGLTE+SPV AR + N+ GS G PI TEIKIVD +T E L G KG+V
Sbjct: 381 IINVPVLVGYGLTETSPVTNARTHSHNLRGSSGQPIPKTEIKIVDLDTGEPLSQGKKGVV 440
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+RG QVMQGY+K P AT +A++ +GW N+GD+GWI P + LV+ GRAKD
Sbjct: 441 LIRGPQVMQGYYKKPEATAKAINSEGWFNSGDLGWITPMND----------LVITGRAKD 490
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK----RL 588
TIVLS GEN+EP +E+A +RS+ I Q++++GQDQ+ GA+IVP+ + + K L
Sbjct: 491 TIVLSNGENIEPQPIEDACVRSAYIDQMMLVGQDQKALGALIVPNLDALQTWGKNQQLNL 550
Query: 589 SIVHADA-------SELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+ DA S+L + L EL + + QI ++ EPF+V
Sbjct: 551 TFPPEDASREAIVNSDLYGKPVQDLFKQELNREVKNRPGYRADDQIKAFELILEPFSV 608
>gi|427707121|ref|YP_007049498.1| long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
gi|427359626|gb|AFY42348.1| Long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
Length = 656
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/595 (40%), Positives = 360/595 (60%), Gaps = 48/595 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L ++I FA GL+ + V+ +++SL +DNS RW +ADQG++ G ++ VR S++ EEL
Sbjct: 66 QLAEQIQQFAAGLQGLEVQVGDRISLIADNSPRWFIADQGIITAGGVDAVRSSQAEKEEL 125
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L I +S S L VE+ + NR+ + LC +R +ILL S P + + + ++
Sbjct: 126 LFIIANSGSTVLVVEDLKTLNRLRDRLCD-LPIRVVILL----SDETPPTDDHLKILNFS 180
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++ + G + N D +AT +YTSGTTG PKGVML+H NL+HQ+
Sbjct: 181 QLQEFGAKHTLVRVQQN------------PDSLATLIYTSGTTGKPKGVMLSHSNLMHQV 228
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
RSL IV E GD LS+LP WH YER+ YF+ S+G +YT +R++K DL+ ++P++M
Sbjct: 229 RSLRAIVQPEPGDIVLSILPSWHSYERSGEYFLLSQGCSQIYTNLRSVKRDLKEFKPNFM 288
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
I+VP ++E++Y G+QKQ A+++ + L+ +S Y +RI +G CL
Sbjct: 289 IAVPRLWESIYEGVQKQFREQPASKQRLINFLVGMSEKYIKAQRIAQGLCLEHVN----- 343
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ I+ + A+I L PLH+L EK+VY K++ A G K +SGGG+LP HID F+E
Sbjct: 344 -ASAIERIGAKIQALALLPLHILGEKIVYAKVREATGGRIKHVISGGGALPRHIDNFFEI 402
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IGV + GYGLTE+SPV ARRP N GS G PI TE+KIVD E + L G +G+V
Sbjct: 403 IGVDILQGYGLTETSPVTNARRPWRNFRGSSGQPIPGTEVKIVDPENRQPLAKGQRGLVL 462
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
++G Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + LVL GRAKDT
Sbjct: 463 LKGPQIMQGYYQNPEATAKAIDAEGWFDSGDLGWVTPEND----------LVLTGRAKDT 512
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI--- 590
IVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A ++
Sbjct: 513 IVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNLEALEKWADSQNVQLR 572
Query: 591 VHADASELS-----KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+ SELS + K I L+ EL + + +IGP ++ EPF++
Sbjct: 573 LPEQNSELSTSVDLESKIIQDLFRQELNREVQNRPGYRLDDRIGPFRLILEPFSI 627
>gi|334117580|ref|ZP_08491671.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
gi|333460689|gb|EGK89297.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
Length = 649
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/595 (41%), Positives = 351/595 (58%), Gaps = 50/595 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEE------KLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+ L Q+I FA GL+ +G++P +++LF+DNS RWL+ADQG++ GA N VRG+
Sbjct: 63 TDLYQQIQQFAAGLQALGIEPNPGEAVPPRVALFADNSPRWLIADQGIMMAGAANAVRGA 122
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ EELL+I S S AL VEN ++ L ++ I+LL S P+ +
Sbjct: 123 TADPEELLYIIQDSGSTALVVENRALLKKLQHRL-PDLPIQLIVLL----SDEEPETSQT 177
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ + +++ G + + +N +K +T+ AT +YTSGTTG PKGVMLTH
Sbjct: 178 LSTVKFSQVMTTG--ANRPLKPTN-----HKPQTL-----ATLLYTSGTTGKPKGVMLTH 225
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 287
NLLHQ+ +L I+ E G+ LS+LP WH YER+ YF+ S+G +YT +R K D +
Sbjct: 226 GNLLHQLTTLGTILQPEAGESALSILPSWHAYERSVEYFLLSQGCTQIYTNIRYFKQDFK 285
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
Y+P YM+SVP ++E++Y +QKQ ++ + L+ S Y +RI +G L+
Sbjct: 286 TYKPQYMVSVPRIWESIYEAVQKQFREQPPNKQKLVDFLLSASQQYIETRRICQGLTLSL 345
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
S + L AR +L P+H LAEKLVY+K++ A G K +SGGGSL H
Sbjct: 346 KPASGS------EKLIARTKSILLSPVHALAEKLVYQKVREATGGRLKWAISGGGSLAAH 399
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
ID F+E + + VGYGLTE+SPV+ RRP N+ GS G P+ HTEIKIVD ET + LP
Sbjct: 400 IDNFFEIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAGQPLAHTEIKIVDPETRQQLPT 459
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G +G+V RG Q+MQGY+ NP AT +A+D +GW +TGD+GW+ P G L+L
Sbjct: 460 GQRGLVLARGPQIMQGYYLNPQATAKAIDPEGWFDTGDLGWLTP----------GNDLIL 509
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E V K
Sbjct: 510 TGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSVGALIVPNAEAV---QK 566
Query: 587 RLSIVHADASELS-KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+ E+ KTI L+ EL + + +IGP ++ EPF++
Sbjct: 567 WAETQNPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRADDRIGPFRLIQEPFSM 621
>gi|298490615|ref|YP_003720792.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
gi|298232533|gb|ADI63669.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
Length = 661
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/599 (40%), Positives = 364/599 (60%), Gaps = 51/599 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVK------PE--EKLSLFSDNSCRWLVADQGMLATGAINVVR 105
S+L +I FA GL+ +G+ P E++SL +DNS W +ADQG++ GA+N VR
Sbjct: 66 SQLADQIQRFAVGLQSLGMNMGDSETPNIGERISLIADNSPGWFIADQGIMTAGAVNAVR 125
Query: 106 GSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV 165
+++ EELL I +S S L VE+ + F ++ + L ++ +ILL S P
Sbjct: 126 SAQAEREELLFIIANSGSTVLVVEDIKTFQKLEKGL-KDLPIKLVILL----SDETPPTA 180
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
E + + ++ +++++G S + +R D +AT +YTSGTT PKGVML
Sbjct: 181 ENLELVNFSQLLEIG--SNHTLAPMKQSR----------DSLATLIYTSGTTAKPKGVML 228
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
+H NLLHQ+ +L +V E+GD LS+LP WH YER+ YF+ S+G +YT +R++KDD
Sbjct: 229 SHSNLLHQVTTLGTVVQPESGDIVLSILPTWHSYERSGEYFLLSQGCTQVYTNLRSVKDD 288
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L+ ++P+Y+I+VP +E++Y G+QKQ + A ++ + + L+ +S Y +RI EG L
Sbjct: 289 LKNFKPNYIIAVPRFWESIYEGVQKQFRSQPAKKQQLIKFLLDMSQKYIQARRIAEGLSL 348
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ PS ++ L A+I+ L P L EKLVY K++ A G K +SGGG+LP
Sbjct: 349 --HHVNPSA----VERLGAKILELALLPFQTLGEKLVYAKVREATGDKIKQVISGGGALP 402
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
HID F+E IGV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIV ET + L
Sbjct: 403 QHIDNFFEIIGVEILQGYGLTETSPVTNARRPWRNLRGSSGQPIPGTEVKIVSPETRQPL 462
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
PAG +G+V +RG Q+MQGY++NP ATK+ +D +GW ++GD+GW+ P + L
Sbjct: 463 PAGERGLVLLRGPQIMQGYYQNPEATKKVIDAEGWFDSGDLGWVTPQND----------L 512
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVL 582
VL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E E
Sbjct: 513 VLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPNLEALEKS 572
Query: 583 MAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
A + +I + ++ E + L EL + + +IGP ++ EPF++
Sbjct: 573 AANQNDNITASSGQKIDLESKMIQDLFRQELNREVKNRPGYRADDRIGPFQLIIEPFSI 631
>gi|119487286|ref|ZP_01621037.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
gi|119455841|gb|EAW36976.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
Length = 648
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/607 (41%), Positives = 376/607 (61%), Gaps = 52/607 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKP--EEKL----SLFSDNSCRWLVADQGMLATGAINV 103
+ S+L +I FA GL+ +GV+ EE L +LF+D+S RW++ADQG++ GA +V
Sbjct: 44 ILSYSELWLQIQQFAAGLQTLGVEAVNEESLPTRIALFADDSPRWIIADQGIMTAGAADV 103
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
VRG+ + EL++I S SV L V + R+ ++ ++FI+LL ++ + +
Sbjct: 104 VRGATADPAELVYILKDSGSVGLVVADLSLLQRLRSSI-EDLPIKFIVLLSDEEPNSSE- 161
Query: 164 IVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
+ +PV ++ ++++ G + F+ R+ Y G D +AT +YTSGTTG PKGV
Sbjct: 162 -IPTLPVLNFTQLLNHGGD----FT----LRRPGVY---GQDSLATLLYTSGTTGKPKGV 209
Query: 224 MLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 283
MLTH NL+HQ+ S+ D+V E GD LS+LP WH + R YF+ SRG +Y+++R K
Sbjct: 210 MLTHGNLVHQLNSIPDVVQPEIGDNVLSLLPTWHSFGRIGQYFLLSRGCTQIYSSIRYFK 269
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
DL+ ++P YM SVP ++E++Y QKQ+ A+R+ +A+ +S Y +R+ +G
Sbjct: 270 RDLKEFKPRYMTSVPRIWESIYEAAQKQLGEQPASRQKIAKFCFSLSEQYVLARRVVQG- 328
Query: 344 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGS 402
LT + + P + + AR+ +L PLH LA+KLVY+KI++A G + K +SGGGS
Sbjct: 329 -LTLDGQSPGGMQKAM----ARLKMLLLTPLHQLADKLVYQKIRAATGGMFKFAISGGGS 383
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
L MH++ FYE +GV + VGYGLTE+SPV+ ARRP N+ GS G PI TEI+IVD ET
Sbjct: 384 LAMHLETFYEIVGVDLLVGYGLTETSPVLTARRPKHNLRGSAGKPIPQTEIRIVDLETGR 443
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
VLP KG+V RG Q+M+GYF+NP AT +A+D +GW NTGDIGW++ +
Sbjct: 444 VLPRLEKGLVLARGPQIMKGYFENPEATAKAIDPEGWFNTGDIGWLSRQND--------- 494
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--E 580
LVL GRAKDTIVLS GEN+EP +E+A +RS I Q++++GQDQ+ GA+IVP+ E E
Sbjct: 495 -LVLTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQMILVGQDQKVLGALIVPNFEGLE 553
Query: 581 VLMAAKRL--------SIVHADASELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHV 627
++ L S+ ++ +L + +L EL R+ ++ S+ +IGP +
Sbjct: 554 KWAVSQNLKLKLPHSESVNDSEGLDLESQPVQNLFRQELNREVKNRPSYRVDDRIGPFRL 613
Query: 628 VDEPFTV 634
+ EPFT+
Sbjct: 614 ILEPFTM 620
>gi|443647067|ref|ZP_21129585.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
gi|159030818|emb|CAO88497.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335613|gb|ELS50079.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
Length = 639
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/597 (41%), Positives = 357/597 (59%), Gaps = 49/597 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++ +EEL
Sbjct: 45 ELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQADAEEL 104
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I S+S L VEN + ++ + + ++ I+LL + + V+ ++
Sbjct: 105 AYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ---TLNFK 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ +G E+ K T G +D+AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 161 QLMAIGAENT------------LKPITKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQV 208
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P M
Sbjct: 209 RNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 269 VGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH----- 323
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE
Sbjct: 324 -ASGIERLKARIQSLLLYPLHAIGDKLVYSKIRQAVGNKVKILVSGGGSLARHLDTFYEI 382
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+V
Sbjct: 383 AGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVL 442
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAKDT
Sbjct: 443 IRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDT 492
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI- 590
IVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS+
Sbjct: 493 IVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAHEQKLSLN 552
Query: 591 ---VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
H+D +S+L +K ++L EL++ + QI ++ EPF++
Sbjct: 553 LPDAHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|434393957|ref|YP_007128904.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
gi|428265798|gb|AFZ31744.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
Length = 655
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/599 (40%), Positives = 365/599 (60%), Gaps = 47/599 (7%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEE-----KLSLFSDNSCRWLVADQGMLATGAINVV 104
V ++L Q+I FA L+ + ++ + +++L SDNS RWL+ADQG++A GA NVV
Sbjct: 61 VITYTQLYQQIQQFAAALQALEIEVKNGDIPPRIALISDNSPRWLIADQGIIAAGAANVV 120
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
R S++ +ELL I +S S+AL VEN + ++ L S + F +LL S P+
Sbjct: 121 RSSQAERQELLFILENSGSIALVVENQQTLQKLRADLDS-LPISFAVLL----SDEIPEA 175
Query: 165 -VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
++ V ++ +++ LG N + +AT +YTSGTTG PKGV
Sbjct: 176 DASKLKVLNFSQLMTLGENQPLQPVQQN------------RETLATLMYTSGTTGKPKGV 223
Query: 224 MLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 283
MLTH NLLHQ+ L IV + GD+ LS+LP WHVYER C YF+ S+G +YT +R +K
Sbjct: 224 MLTHGNLLHQVEMLGCIVQPKEGDRVLSILPTWHVYERTCEYFLLSQGCTQIYTNIRQVK 283
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
D++ ++P+YM+ VP ++E++Y G++KQ A ++ + + S + +RI G
Sbjct: 284 KDIREFKPNYMVGVPRLWESIYEGVKKQFREQPANKQQLIDFFLTKSQQFIEARRIVHGL 343
Query: 344 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 402
L N PS L + L A + L P+H L EK+VY+K++ A G K +SGGGS
Sbjct: 344 SL--NSLNPS----LSERLSASVQATALAPIHALGEKIVYRKVREATGGQLKQVISGGGS 397
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
L MH++ F+E +GV+V VGYGLTE+SPV ARRP N+ GS G P+ T+++IVD ET +
Sbjct: 398 LAMHLENFFEIVGVEVLVGYGLTETSPVTNARRPWRNLRGSAGQPLPGTQVRIVDPETRQ 457
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
LP G +G+V VRG Q+MQGY++NP AT +A+D +GW +TGD+GW+ P +
Sbjct: 458 PLPQGERGLVMVRGPQIMQGYYQNPEATAKAIDSEGWFDTGDLGWLTPEND--------- 508
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--E 580
LV+ GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ E E
Sbjct: 509 -LVITGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQKSLGALIVPNLEALE 567
Query: 581 VLMAAKRLSIVHADASELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
A++ + + ++L+ + +L EL R+ ++ + +IGP +V EPF++
Sbjct: 568 QWAASQNIELKVDSPTDLNSKTIQNLFRQELNREVKNRPGYRPDDRIGPFELVLEPFSM 626
>gi|425470138|ref|ZP_18849008.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
gi|389884320|emb|CCI35368.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
Length = 639
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/597 (41%), Positives = 356/597 (59%), Gaps = 49/597 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++ +EEL
Sbjct: 45 ELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQADAEEL 104
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I S+S L VEN + ++ + + ++ I+LL + + V+ ++
Sbjct: 105 AYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ---TLNFK 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ +G E+ K T +D+AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 161 QLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQV 208
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P M
Sbjct: 209 RNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L P
Sbjct: 269 VGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG- 327
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE
Sbjct: 328 -----ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEI 382
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD ++ EVLP G+V
Sbjct: 383 AGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLQSKEVLPTEKHGLVL 442
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAKDT
Sbjct: 443 IRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDT 492
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI- 590
IVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS+
Sbjct: 493 IVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLSLN 552
Query: 591 ---VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
H+D +S+L +K ++L EL++ + QI ++ EPF++
Sbjct: 553 LPDAHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|75909380|ref|YP_323676.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
gi|75703105|gb|ABA22781.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
Length = 658
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/598 (40%), Positives = 365/598 (61%), Gaps = 50/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+L ++I FA GL+ +GV+ +++SL +DNS RW +ADQG++ GA++ VR S++ EE
Sbjct: 65 QQLAEKIQLFASGLQALGVQAGDRISLIADNSPRWFIADQGIMTAGAVDAVRSSQAEKEE 124
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL+I HS S AL VE+ + FN++ + L +IL + P + + V ++
Sbjct: 125 LLYIVAHSGSTALVVEDLKTFNKLQDRLHDLPIQVVVIL-----TDETPPTEQSLKVLNF 179
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++I++G + AF R D++AT +YTSGTTG PKGVML++ NLLHQ
Sbjct: 180 LQLIEVG--TNHAFVPVKRKR----------DELATLIYTSGTTGKPKGVMLSYSNLLHQ 227
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ + +V + GD LS+LP WH YER Y++ S+G +YT +R++K DL++Y+P+Y
Sbjct: 228 VTTFRVVVQPKVGDTALSILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKADLKQYKPNY 287
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M++VP ++E++Y G+QKQ A ++ + + L+ +S Y +RI +G L + S
Sbjct: 288 MVAVPRLWESIYEGVQKQFREQPANKQRLIKFLLGMSEKYIKAQRIAQGTSL--DHLHAS 345
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
L LI A+++ P H+L +KLVY K++ A G K +SGGG+LP HID F+E
Sbjct: 346 SLERLI----AKVLELAFLPFHVLGQKLVYGKVKEATGGRFKQVISGGGALPKHIDTFFE 401
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
IGV++ GYGLTE+SPV RRP N +G+ G PI TE+KIVD ET + LP G +G+V
Sbjct: 402 IIGVQILQGYGLTETSPVTNVRRPWRNFIGTSGQPIPGTEVKIVDPETRQPLPVGQRGLV 461
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
++G QVMQGY++NP AT +A+D GW ++GD+GW+ P + LVL GRAKD
Sbjct: 462 LLKGPQVMQGYYQNPEATAKAIDPQGWFDSGDLGWVTPDNE----------LVLTGRAKD 511
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-- 590
TIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+ ++
Sbjct: 512 TIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNVEALAKWAESQNLVL 571
Query: 591 -VHADASELSKEKTISL----LYGELRKWTS---------KCSFQIGPIHVVDEPFTV 634
V D S + I+L + G R+ + + ++GP ++ EPF++
Sbjct: 572 SVEDDNLTSSSSQKINLESKMIQGLFRQELNREVQNRPGYRPDDRVGPFKLILEPFSI 629
>gi|428311361|ref|YP_007122338.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
gi|428252973|gb|AFZ18932.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
Length = 672
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/611 (41%), Positives = 368/611 (60%), Gaps = 63/611 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPE-------EKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
++L Q+I FA GL+ +G K E +++LF+DNS RW++ADQG++ GA N VR
Sbjct: 66 AQLYQQIQQFAAGLQSLGFKTELDETGLPTRIALFADNSPRWMIADQGIITAGAANAVRS 125
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
+++ EELL+I S S+ L VEN + + L S + ++ILL S P E
Sbjct: 126 AQADREELLYILEDSGSIGLVVENLALLKSLRDRLDS-LPIGWVILL----SEEQPPEGE 180
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
+ + +Y +++ G S + H++ D +AT +YTSGTTG PKGVMLT
Sbjct: 181 TLKIINYAQLMAAG------ASHPLTSVIHHR------DTLATLLYTSGTTGKPKGVMLT 228
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 286
H NLLHQ+ ++ + E GDK LS+LP WH YERA YFI S+G +YT +RN+K DL
Sbjct: 229 HGNLLHQVVNIGSVWLPEPGDKVLSILPSWHAYERAVEYFILSQGCTQIYTNLRNVKKDL 288
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
+ ++P M+ VP ++E++Y G+QKQ A ++ + + + +S Y +R+ +G L
Sbjct: 289 REFKPQLMVGVPRLWESIYEGVQKQFREQPANKQRLVQNFLNVSKRYIEARRLAQGLSL- 347
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
QPS I+ L AR+ +LWP+H LA K+VY+K++ A G K +SGGGSL
Sbjct: 348 -GNLQPSA----IERLKARVQATVLWPVHQLANKIVYQKVREATGGQIKIVISGGGSLAR 402
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
H+D F+E IGV+V VGYGLTE+SPV RRP N+ S G P+ TEI+IV+ ET ++LP
Sbjct: 403 HLDDFFEIIGVEVLVGYGLTETSPVTNVRRPWRNLRYSSGPPMPGTEIRIVNPETRQLLP 462
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G +G+V VRG QVMQGY+K P AT +A+D DGW +TGD+GW+ P + LV
Sbjct: 463 QGQQGLVMVRGPQVMQGYYKKPEATAKAIDADGWFDTGDLGWVTPENH----------LV 512
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM-- 583
L GRAKDTIVL+ GEN+EP +E+A +RS+ I QI+++GQDQR GA+IVP+ E +
Sbjct: 513 LTGRAKDTIVLTNGENIEPQPIEDACIRSAYIDQIMLVGQDQRSLGALIVPNLEALQQWA 572
Query: 584 AAKRLSIVHADAS---------------ELSKEKTISLLYGEL-RKWTSKCSF----QIG 623
AA+ L++ DA +L ++ SL EL R+ ++ + +IG
Sbjct: 573 AAQNLNLRLPDAVSPQSAAPPEEFRTAIDLQSKEVQSLFRSELNREVKNRPGYRPDDRIG 632
Query: 624 PIHVVDEPFTV 634
++ EPF++
Sbjct: 633 SFELILEPFSL 643
>gi|119510427|ref|ZP_01629561.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
gi|119464956|gb|EAW45859.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
Length = 658
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/601 (39%), Positives = 363/601 (60%), Gaps = 49/601 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ ++L +I FA GL+ GV+ +++SL +DNS RW +ADQGM+ GA+N VR S++
Sbjct: 61 IITYAQLADKIQQFAAGLQASGVQAGDRISLIADNSPRWFIADQGMMTAGAVNAVRSSQA 120
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
EELL I +S S AL V++ +++ E L + ++ IILL S P
Sbjct: 121 EREELLFIIANSGSTALVVQDLNTLDKLRERL-NDLPIQLIILL----SDETPPPEATPK 175
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
V ++ +++++G A D +AT +YTSGTTG PKGVML+H N
Sbjct: 176 VLNFSQLLEIG------------ANHTLMRVLPKGDSLATLIYTSGTTGKPKGVMLSHNN 223
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+++L +V + GD LS+LP WH YER+ YF+ S+G +YT +R++K DL+++
Sbjct: 224 LLHQVKTLGTVVQPQPGDVILSILPSWHSYERSGEYFLLSQGCTQVYTNLRSVKQDLKKF 283
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+PHYMI+VP ++E+++ G+ KQ A ++ + L+ +S Y +RI +G L N
Sbjct: 284 KPHYMIAVPRLWESIHEGVLKQFREQPANKQRLINFLLGMSETYIQKQRIAQGLSL--NH 341
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
S L + ++I+ +L P H L E+LVY K++ A+G K ++GGG+LP HID
Sbjct: 342 LHASSL----EKFASKIVALVLLPFHALGERLVYAKVREAVGGRMKHVITGGGALPRHID 397
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+E I V++ GYGLTE+SPV ARRP NV GS G PI TE+KIVD ET LP G
Sbjct: 398 TFFEIISVEILQGYGLTETSPVTNARRPWHNVRGSSGQPIAGTEVKIVDPETKVPLPLGE 457
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V ++G Q+MQGY++NP AT + +D +GW N+GD+GW+ P + LVL G
Sbjct: 458 RGLVLLKGPQIMQGYYQNPEATAKVIDAEGWFNSGDLGWVTPEND----------LVLTG 507
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-- 586
RAKDTIVL+ GEN+EP +E+A LRS + QI+++GQDQR GA+IVP+ E + A
Sbjct: 508 RAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQRSIGALIVPNTEALKTWASSQ 567
Query: 587 --RLSIVHADASELS-----KEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFT 633
+L ++ ++ E+S + K I L+ EL + + ++GP ++ EPF+
Sbjct: 568 NLQLPLLQENSPEISTSIDLESKMIQDLFRQELNREVQNRPGYRADDRVGPFRLILEPFS 627
Query: 634 V 634
+
Sbjct: 628 M 628
>gi|425465198|ref|ZP_18844508.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
gi|389832583|emb|CCI23641.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
Length = 639
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/596 (40%), Positives = 354/596 (59%), Gaps = 49/596 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++ +EEL
Sbjct: 45 ELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQADAEEL 104
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I S+S L VEN + ++ + + ++ I+LL + + V+ ++
Sbjct: 105 AYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ---TLNFK 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ +G E+ K T +D+AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 161 QLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQV 208
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P M
Sbjct: 209 RNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 269 VGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH----- 323
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE
Sbjct: 324 -ASEIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEI 382
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+V
Sbjct: 383 AGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVL 442
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAKDT
Sbjct: 443 IRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDT 492
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI--- 590
IVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 493 IVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKISLN 552
Query: 591 ---VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFT 633
+H+D +S+L +K ++L EL++ + + QI ++ EPF+
Sbjct: 553 LPDLHSDRSTILSSDLYSKKVLALYQQELKREVRNRPSYRTDDQIKTFELILEPFS 608
>gi|354566187|ref|ZP_08985360.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
gi|353546695|gb|EHC16143.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
Length = 659
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/602 (40%), Positives = 369/602 (61%), Gaps = 50/602 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V ++L Q+I FA GL+ +GV+ +++SL +DNS RWL+ADQG++ G ++ VR S++
Sbjct: 61 VLTYTELCQQIQRFAAGLQALGVQAGDRISLIADNSPRWLIADQGIMTAGGVDAVRSSQA 120
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
EELL I +S S AL VE+ + N++ +L + ++F+I+L S+ A E +
Sbjct: 121 DKEELLFIVANSGSTALVVEDLKTLNKLRGSL-NDLPIQFVIVL----SNEALPEAETLK 175
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++++ +++++G + N + D+AT +YTSGTTG PKGVMLTH+N
Sbjct: 176 LYTFSQLMEIGAQHSLQPVKRNLS------------DLATLIYTSGTTGKPKGVMLTHRN 223
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
L+HQI ++ +V GD LS+LP WH YER+C YF+ S+G +YT +R++K DL+ Y
Sbjct: 224 LMHQIVAIPVVVQPRPGDIVLSILPTWHSYERSCEYFLLSQGCTQVYTNLRSIKRDLKEY 283
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
QPHYM++VP + E++Y G QKQ A+R+ + I Y +R G L
Sbjct: 284 QPHYMVAVPRLLESIYEGAQKQFREQPASRQRLINFFFEIGEKYIKARRTLTGLNL--EN 341
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
PS + D L A + A L PL+ L EKLVY K++ A G K +SGGG+LP H+D
Sbjct: 342 LNPS----MGDRLTASLQVAALSPLYALGEKLVYSKVREATGGRVKQMISGGGALPKHVD 397
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+E +GV++ VGYGLTE+SPV ARR N+ G+ G PI TE KIVD ET + LP G
Sbjct: 398 DFFEILGVEILVGYGLTETSPVTHARRHWRNLRGAAGQPIPGTETKIVDPETKKELPTGE 457
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + L+L G
Sbjct: 458 RGLVLLRGPQIMQGYYQNPEATAKAIDPEGWFDSGDLGWVTPQND----------LILTG 507
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAK 586
RAKDTIVL+ GEN+EP +E+A LRS I QI+++GQD++ GA+IVP+ E E A+
Sbjct: 508 RAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDRKSLGALIVPNLEALEKWAASG 567
Query: 587 RL-------SIVHADASELSKEKTI--SLLYGEL-RKWTSKCSF----QIGPIHVVDEPF 632
L ++ A + +++ E I L EL R+ ++ + +IGP ++ EPF
Sbjct: 568 NLQLTIEDENVTAATSQKINLESKIIQDLFRQELNREVQNRPGYRPDDRIGPFKLILEPF 627
Query: 633 TV 634
++
Sbjct: 628 SI 629
>gi|166368626|ref|YP_001660899.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
gi|166090999|dbj|BAG05707.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
Length = 639
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/601 (40%), Positives = 355/601 (59%), Gaps = 49/601 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ +L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++
Sbjct: 40 ILTYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+EEL +I S+S L VEN + ++ + + ++ I+LL + + V+
Sbjct: 100 DAEELAYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ--- 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ +++ +G E+ K T +D+AT +YTSGTTG PKGVML+H N
Sbjct: 156 TLNFKQLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGN 203
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++
Sbjct: 204 LLHQVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKSDLKQF 263
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 264 SPQLMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D
Sbjct: 324 ------ASEIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLD 377
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP
Sbjct: 378 TFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEK 437
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL G
Sbjct: 438 HGLVLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+
Sbjct: 488 RAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQ 547
Query: 589 SI------VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPF 632
I +H+D +S+L +K ++L EL++ + + QI ++ EPF
Sbjct: 548 KISLNLPDLHSDRSTILSSDLYSKKVLALYQQELKREVRNRPSYRTDDQIKTFELILEPF 607
Query: 633 T 633
+
Sbjct: 608 S 608
>gi|428201789|ref|YP_007080378.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
gi|427979221|gb|AFY76821.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
Length = 638
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/531 (43%), Positives = 334/531 (62%), Gaps = 34/531 (6%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ ++L ++I A GL+ GV+P+ K++LF+DNS RW +ADQG++ GA N VR + +
Sbjct: 40 ILTYAQLLEKIKQLAAGLQACGVQPDSKVALFADNSPRWFIADQGIIMAGAANAVRSATA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+ELL+I + S+S +L +EN N++ L + ++LL S +P+ E +
Sbjct: 100 DRDELLYILDDSDSTSLVIENLNALNKLRPQL-DDLPIELLVLL----SDESPNANEPLK 154
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ ++ ++++LG + N R+ + +AT +YTSGTTG PKGVML+H N
Sbjct: 155 ILNFKQLLELGESH-----NLNPIRQDRQT-------LATLIYTSGTTGKPKGVMLSHGN 202
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+ +L ++ E GD+ LS+LP WH YER+ YFI S G +YT +R+ K+DL+R+
Sbjct: 203 LLHQVTNLIAVLQPEPGDRVLSILPSWHCYERSGEYFILSHGCTQIYTNIRSFKNDLKRF 262
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+PHYMI VP ++E+LY +QKQ+ +++ +A + IS Y KR +G L
Sbjct: 263 KPHYMIGVPRLWESLYEAVQKQLREQPESKQRLANFFLGISTRYIMAKRTEQGLNL--EN 320
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
PS + A+I +L PLH L ++LVY+KI+ A G + K +SGGG+L MH+D
Sbjct: 321 LNPSG----GERFMAKITANLLAPLHALGDRLVYQKIRQATGGNVKTLISGGGALAMHLD 376
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE IGV + VGYGLTE+SPV AR N+ GS G PI TEI+IVD +T + LP
Sbjct: 377 NFYEIIGVPLVVGYGLTETSPVTNARTLKHNLRGSAGKPIPETEIRIVDPDTRQTLPPTQ 436
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
KGIV +RG QVMQGY+K P AT + +D +GW ++GD+GW+ P + LVL G
Sbjct: 437 KGIVLIRGPQVMQGYYKKPEATAKVIDAEGWFDSGDLGWVTPAND----------LVLTG 486
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
RAKDTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ E
Sbjct: 487 RAKDTIVLSNGENIEPQPIEDACIRSPYIDQIMLVGQDQKALGALIVPNLE 537
>gi|434406627|ref|YP_007149512.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
gi|428260882|gb|AFZ26832.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
Length = 658
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/531 (42%), Positives = 337/531 (63%), Gaps = 34/531 (6%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V ++L +++ FA GL+ +G K + +SL +DNS RW +ADQG++ G +N VR +++
Sbjct: 61 VVTYTQLAEQMQQFAAGLQALGFKQGDSISLIADNSPRWFIADQGIMTAGVVNAVRSAQA 120
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
EELL I +S+S AL VE+ + N++ + L + ++ +ILL S P E I
Sbjct: 121 EREELLFIIANSDSTALVVEDLKTLNKLQQGL-NDLPIQLVILL----SDETPPTDEFIK 175
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
V ++ +++++G + ND D +AT +YTSGTTG PKGVML+H N
Sbjct: 176 VLNFSQLMEVGAKHNFVPVKQND------------DTLATLIYTSGTTGKPKGVMLSHGN 223
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+++L +V + GDK LS+LP WH YER+ YF+ S+G E +YT +R++K DL+++
Sbjct: 224 LLHQVKALGAVVQPQVGDKVLSILPSWHSYERSGEYFLLSQGCEQIYTNLRSVKADLKKF 283
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P +MI+VP ++E++Y G+QKQ A ++ + + L+ IS Y RI E L
Sbjct: 284 KPRFMIAVPRLWESIYEGVQKQFREQPANKQRLIKFLLGISEKYIKAGRIAENLSLEH-- 341
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ + L +RI+ + L+P H L E+LVY K++ A G K +SGGG+LP HID
Sbjct: 342 ----LDASTFERLASRILASALFPFHALGERLVYAKVREATGGRIKYVISGGGALPKHID 397
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+E GV++ VGYGLTE+SPV ARRP N G+ G PI TE KIVD E+ + L A
Sbjct: 398 NFFEITGVEILVGYGLTETSPVTHARRPWRNFRGTAGQPIPGTEAKIVDPESRKPLAARE 457
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW+ P + LVL G
Sbjct: 458 RGLVLLRGPQIMQGYYQNPEATAKAIDAEGWFDSGDLGWLTPEND----------LVLTG 507
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
RAKDTIVL+ GEN+EP +E+A LRS + QI+++GQDQR GAIIVP+ E
Sbjct: 508 RAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQRCIGAIIVPNIE 558
>gi|170077298|ref|YP_001733936.1| long-chain-fatty-acid CoA ligase [Synechococcus sp. PCC 7002]
gi|169884967|gb|ACA98680.1| long-chain-fatty-acid CoA ligase (AMP-forming) [Synechococcus sp.
PCC 7002]
Length = 647
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/526 (43%), Positives = 327/526 (62%), Gaps = 35/526 (6%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q I F GL+ +G++P+EK++L +DNS RW +ADQG +A GA+N VR S++ +EL
Sbjct: 54 QLWQGIQQFGAGLQALGLQPQEKVALIADNSPRWFIADQGSIAAGAVNAVRSSQAEKQEL 113
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L+IY SES L VE+ + F R+ + + R +I L ++ P+ E+P+F++
Sbjct: 114 LYIYTDSESRFLIVEDRKTFERLNPEITNLQP-RAVIFLTDEE---VPET--ELPIFNFS 167
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ LG + + D+ T +YTSGTTG PKGVML+H N+L+Q+
Sbjct: 168 QLMTLGSQEPLTMPGRS------------PQDLMTLIYTSGTTGKPKGVMLSHGNVLYQV 215
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R+L ++ GD LS+LP WH YERA YF+ S+G +YT +RN+K DLQ Y+P YM
Sbjct: 216 RNLDQVIQPNPGDVTLSILPTWHSYERAAEYFLLSQGCTQIYTNIRNIKKDLQTYKPGYM 275
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
++VP ++E++Y G+QK + A ++ + + S Y +RI L +
Sbjct: 276 VAVPRIWESIYEGVQKNLREQPAKKQKLVNFFLTCSQNYVLAQRIANNLSLEH------F 329
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
V+ + L AR L+P HLL KLVY+KI+ A G + +SGGGSL HID F+E
Sbjct: 330 HVSSLTRLMARAKAIALYPFHLLGNKLVYEKIRGATGGKIRYVISGGGSLAQHIDTFFEI 389
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+ + VGYGLTE+SPV ARRP NV GS G + TEI+IVD ET + L G KG+V
Sbjct: 390 VGINILVGYGLTETSPVTNARRPERNVCGSAGPALKGTEIRIVDPETRQTLSQGQKGLVL 449
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG QVMQGY++ P AT +A+D +GW ++GD+GW+ P G LVL GRAKDT
Sbjct: 450 IRGPQVMQGYYRKPEATAKAIDPEGWFDSGDLGWVTPQ----------GDLVLTGRAKDT 499
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
IVL+ GEN+EP +E+A RS I QI+++GQDQ+ GA+IVP+ E
Sbjct: 500 IVLTNGENIEPQPIEDACARSPYIDQIMLVGQDQKSLGALIVPNLE 545
>gi|425460505|ref|ZP_18839986.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
gi|389826794|emb|CCI22432.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
Length = 639
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/602 (40%), Positives = 357/602 (59%), Gaps = 49/602 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ +L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++
Sbjct: 40 ILTYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+EEL +I S+S L VEN + ++ + + ++ I+LL + + V+
Sbjct: 100 DAEELAYILADSDSQTLIVENKQTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ--- 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ +++ +G E+ K T G +D+AT +YTSGTTG PKGVML+H N
Sbjct: 156 TLNFKQLMAIGAENT------------LKPITKGENDLATLIYTSGTTGQPKGVMLSHGN 203
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+R+L I + GD+ LS+LP WH YER+C YFI ++G +YT++R K DL+++
Sbjct: 204 LLHQVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFILAQGCTQIYTSIRTFKQDLKQF 263
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L
Sbjct: 264 SPQLMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLH 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D
Sbjct: 324 ------ASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLD 377
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP
Sbjct: 378 TFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEK 437
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL G
Sbjct: 438 HGLVLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--K 586
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A +
Sbjct: 488 RAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQ 547
Query: 587 RLSI----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPF 632
+LS+ H+D +S+L +K ++L EL++ + QI ++ EPF
Sbjct: 548 KLSLNLPDAHSDRSTILSSDLYSKKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPF 607
Query: 633 TV 634
++
Sbjct: 608 SL 609
>gi|440680365|ref|YP_007155160.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
gi|428677484|gb|AFZ56250.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
Length = 660
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/599 (40%), Positives = 362/599 (60%), Gaps = 51/599 (8%)
Query: 54 SKLEQEILDFAEGLRVI------GVKPE--EKLSLFSDNSCRWLVADQGMLATGAINVVR 105
++L ++I FA GL+ + G P +++SL +DNS RW +ADQG++ GA+N VR
Sbjct: 65 NQLAEQIQRFASGLQALIMDVGNGETPTFGDRISLIADNSPRWFIADQGIMTAGAVNAVR 124
Query: 106 GSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV 165
+++ EELL I +S S + VE+ + FN+I E L + ++ +ILL + P
Sbjct: 125 SAQAEREELLFIIANSGSTVVVVEDIKTFNKIKEGL-NDLPIKLVILL----ADETPPTT 179
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
E V ++ +++++G SN K S+ +AT +YTSGTTG PKGVML
Sbjct: 180 ENFRVVNFLQVLEIG---------SNHTLATVKQ---SSETLATLIYTSGTTGKPKGVML 227
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
+H+NLLHQ++SL +V + G+ LS+LP WH YER+ YF+ S+G +YT +R +K D
Sbjct: 228 SHQNLLHQVKSLGTVVQPQKGNIVLSILPTWHSYERSGEYFLLSQGCTQIYTNLRAVKQD 287
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L++++P+YMI+VP ++E++Y G+QKQ A ++ + + L+ +S Y +RI +G L
Sbjct: 288 LKKFKPNYMIAVPRLWESIYEGVQKQFREQPAKKQQLIQFLLDMSQKYITARRITQGLSL 347
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ L A+I LWP L EKLVY K++ A G K +SGGG+LP
Sbjct: 348 DHIHASSG------ERLGAKIREIALWPFQALGEKLVYAKVREATGGKIKQVISGGGALP 401
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
HID F+E +GV++ GYGLTE+SPV ARRP N+ GS G PI TE+KIV+ ET + L
Sbjct: 402 RHIDNFFEIVGVEILQGYGLTETSPVTNARRPWRNLRGSSGQPIPGTEVKIVNPETRQPL 461
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
P G +G+V ++G Q+MQGY++NP ATK+ +D +GW ++GD+GW+ P + L
Sbjct: 462 PVGERGLVLLKGPQIMQGYYQNPEATKKVIDAEGWFDSGDLGWVTPQND----------L 511
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVL 582
VL GRAKDTIVL+ GEN+EP +E+A LRS + QI+++GQDQR GA+IVP+ E E
Sbjct: 512 VLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQRSIGALIVPNLEALEKW 571
Query: 583 MAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+ I + + ++ E I L EL + + +IGP ++ EPF++
Sbjct: 572 AETQNDKITASTSQKIDLESKIIQDLFRQELNREVKDRPGYRADDRIGPFKLILEPFSI 630
>gi|425448641|ref|ZP_18828485.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
gi|389768094|emb|CCI06699.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
Length = 639
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/597 (40%), Positives = 352/597 (58%), Gaps = 49/597 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++ +EEL
Sbjct: 45 QLYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQADAEEL 104
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I S+S L VEN + ++ + + ++ I+LL + + V+ ++
Sbjct: 105 AYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ---TLNFK 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ +G E+ K T +D+AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 161 QLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQV 208
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P M
Sbjct: 209 RNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 269 VGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH----- 323
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE
Sbjct: 324 -ASEIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEI 382
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+V
Sbjct: 383 AGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVL 442
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG QVMQGY+K P AT +A+ DGW ++GDIGW+ G LVL GRAKDT
Sbjct: 443 IRGPQVMQGYYKKPEATDKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDT 492
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI--- 590
IVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A+ I
Sbjct: 493 IVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKISLN 552
Query: 591 ---VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+H+D +S+L +K + L EL++ + QI ++ EPF++
Sbjct: 553 LPDLHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPGYRADDQIKTFELILEPFSL 609
>gi|425454194|ref|ZP_18833940.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
gi|389805196|emb|CCI15162.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
Length = 639
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/602 (40%), Positives = 356/602 (59%), Gaps = 49/602 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ +L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++
Sbjct: 40 ILTYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+EEL +I S+S L VEN + ++ + + ++ I+LL + V+
Sbjct: 100 DAEELAYILADSDSQTLIVENKKTLGKLLAKI-PELPLKLIVLLTDEDPDTGAISVQ--- 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ +++ +G E+ K T G +D+AT +YTSGTTG PKGVML+H N
Sbjct: 156 TLNFKQLMAIGAENT------------LKPITKGENDLATLIYTSGTTGQPKGVMLSHGN 203
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++
Sbjct: 204 LLHQVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQF 263
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L
Sbjct: 264 SPQLMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLH 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P+ + L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D
Sbjct: 324 ASPT------ERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKIFVSGGGSLARHLD 377
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP
Sbjct: 378 TFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEK 437
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL G
Sbjct: 438 HGLVLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--K 586
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A +
Sbjct: 488 RAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQ 547
Query: 587 RLSI----VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPF 632
+LS+ +H+D +S+L +K + L EL++ + + QI ++ EPF
Sbjct: 548 KLSLNLPDLHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPSYRTDDQIKTFELILEPF 607
Query: 633 TV 634
++
Sbjct: 608 SL 609
>gi|411117918|ref|ZP_11390299.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
gi|410711642|gb|EKQ69148.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
Length = 659
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/527 (42%), Positives = 339/527 (64%), Gaps = 37/527 (7%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L ++I A GL+ +G++P +++ LF+DNS RWL+ADQGM+ GA+N VR S++ +E
Sbjct: 59 AQLYEQIQQCASGLQALGIQPGDRICLFADNSPRWLIADQGMMMAGAVNAVRSSQADKDE 118
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L + +S S+AL VE+ F+++ + L S + F+ LL + P I + ++
Sbjct: 119 LHFLLENSGSIALVVEDVATFSKLRDRL-SDLPLNFVALL----TDETPPENTGIKILNF 173
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++++LG + + N +R+ D+AT +YTSGTTG PKG ML+H NLLHQ
Sbjct: 174 IQLMNLG--ANHSLQPVNRSRQ----------DLATLIYTSGTTGKPKGAMLSHGNLLHQ 221
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ +L +V + GD+ LS+LP WH YER+ YF+ S+G +YT++R +K DL+ ++P Y
Sbjct: 222 VETLGAVVQPKLGDRVLSILPTWHAYERSAEYFLLSQGCTQIYTSIRTVKKDLKDFKPQY 281
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQP 352
M+SVP ++E++Y G+QKQ ++ + + IS Y +R++ L R P
Sbjct: 282 MVSVPRIWESVYEGVQKQFREQPEKKQKLIHFFLNISHRYIHARRVWNNLELLNREPSLP 341
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLF 410
L+AL A+I+ IL PLH L EK+VY K++ A G + +SGGGSL HID F
Sbjct: 342 VRLLAL-----AQIV--ILAPLHALGEKIVYSKVREAATGGQFRQAISGGGSLARHIDDF 394
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+E +G++V VGYGLTE+SPV ARRP N+ GS G PI TEI+IVD E+ + LP G +G
Sbjct: 395 FEIMGIEVLVGYGLTETSPVTNARRPWRNLRGSAGQPIPGTEIRIVDPESRKPLPVGERG 454
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+V +RG Q+MQGY+ NP AT++A+D +GW ++GD+GW+ + LVL GRA
Sbjct: 455 LVLIRGPQIMQGYYNNPEATRKAIDPEGWFDSGDLGWVTKEND----------LVLTGRA 504
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
KDTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP+
Sbjct: 505 KDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPN 551
>gi|440754872|ref|ZP_20934074.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
gi|440175078|gb|ELP54447.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
Length = 639
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/602 (40%), Positives = 356/602 (59%), Gaps = 49/602 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ +L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++
Sbjct: 40 ILTYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+EEL +I S+S L VEN + ++ + + ++ I+LL + + V+
Sbjct: 100 DAEELAYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ--- 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ +++ +G E+ K T +D+AT +YTSGTTG PKGVML+H N
Sbjct: 156 TLNFKQLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGN 203
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++
Sbjct: 204 LLHQVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQF 263
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P M+ VP ++E+LY GIQKQ SA ++ + R L+ S Y KRI + L
Sbjct: 264 SPQLMVGVPRLWESLYEGIQKQFSEQSATKQKLVRFLLEKSENYVIAKRIADNLSLDHLH 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D
Sbjct: 324 ------ASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLD 377
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP
Sbjct: 378 TFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEK 437
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL G
Sbjct: 438 HGLVLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--K 586
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A +
Sbjct: 488 RAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQ 547
Query: 587 RLSI----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPF 632
+LS+ H+D +S+L +K + L EL++ + QI ++ EPF
Sbjct: 548 KLSLNLPDPHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPGYRTDDQIKTFELILEPF 607
Query: 633 TV 634
++
Sbjct: 608 SL 609
>gi|425443867|ref|ZP_18823930.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
gi|389733516|emb|CCI02743.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
Length = 639
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/602 (40%), Positives = 355/602 (58%), Gaps = 49/602 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ +L Q+I FA L+ +GV E ++LF DNS RW +ADQG +A GA N VR +++
Sbjct: 40 ILTYRELYQQIQQFAAALQALGVTETENVALFVDNSPRWFIADQGSMAAGAANAVRSAQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+EEL +I S+S L VEN + ++ + + ++ I+LL + + V+
Sbjct: 100 DAEELAYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ--- 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ +++ +G E+ K T G +D+AT +YTSGTTG PKGVML+H N
Sbjct: 156 TLNFKQLMAIGAENT------------LKPITKGENDLATLIYTSGTTGQPKGVMLSHGN 203
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++
Sbjct: 204 LLHQVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQF 263
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L
Sbjct: 264 SPQLMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLH 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P + L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D
Sbjct: 324 ASPG------ERLKARIQSLLLYPLHAIGDKLVYSKIRQAVGNKVKIFVSGGGSLARHLD 377
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP
Sbjct: 378 TFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVLQTEISIVDLHSKEVLPTEK 437
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVM+GY+K P AT++A+ DGW ++GDIGW+ G LVL G
Sbjct: 438 HGLVLIRGPQVMRGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--K 586
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A +
Sbjct: 488 RAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQ 547
Query: 587 RLSI----VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPF 632
+LS+ +H+D +S+L +K + L EL++ + + QI ++ EPF
Sbjct: 548 KLSLNLPDLHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPSYRTDDQIKTFELILEPF 607
Query: 633 TV 634
++
Sbjct: 608 SL 609
>gi|220910327|ref|YP_002485638.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 7425]
gi|219866938|gb|ACL47277.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7425]
Length = 684
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/596 (41%), Positives = 361/596 (60%), Gaps = 49/596 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L +I FA GL+ +GV+ ++++L++DNS RWL+ADQG + GA+NVVR S+S ++EL
Sbjct: 93 ELYYQIQRFAAGLQAMGVQAGDRVALYADNSPRWLIADQGSMMAGAVNVVRSSQSEAQEL 152
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++I S S L VE+ ++ TL +R I+LL S PD I + ++
Sbjct: 153 IYILQDSGSTTLIVEDRATLKKLTPTL-PDLPLRVIVLL----SDEDPDPGLGIKMVNFA 207
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++ G A+ R + D+AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 208 QVFQEG-----AYGTVRSVR-------VRKTDLATLIYTSGTTGKPKGVMLSHGNLLHQV 255
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
SL ++ + GD+ LS+LP WH YERAC YF+FS G +YT +R++K D++R +P YM
Sbjct: 256 TSLGTVIQPQAGDRVLSILPTWHSYERACEYFLFSLGCTQIYTNLRHIKQDIKRVKPQYM 315
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
++VP ++E++Y G+Q+Q A+++ + + IS Y R+ G L + PS
Sbjct: 316 VAVPRLWESIYEGVQRQFREQPASKQKLINFFLGISQRYIKASRLRAGLDL--DNLHPSG 373
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEA 413
L+ A+I +L PLH L EK+VY+K++ A G K +SGGGSL H+++FYE
Sbjct: 374 GQKLL----AQIQVLLLRPLHQLGEKIVYQKVREATGGCLKQVISGGGSLARHLEVFYEM 429
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IGV++ VGYGLTE+SPV+ ARRP N+ GS G P+ +TEIKIVD E+ L G KG+V
Sbjct: 430 IGVEILVGYGLTETSPVLTARRPWENLRGSAGKPVPYTEIKIVDPESRATLSLGEKGLVM 489
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
RG Q+MQGY+ P AT + LD +GW +TGD+GW+ LVL GR KDT
Sbjct: 490 ARGPQIMQGYYGKPEATAKVLDSEGWFDTGDVGWLTDRQD----------LVLTGRQKDT 539
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLSIV 591
IVL+ GEN+EP +E+A LRS+ I QI+++GQDQR GA+IVP+ E E A++ ++
Sbjct: 540 IVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQRVLGALIVPNLEALEQWAASQNYALK 599
Query: 592 HADASELSKEKTISL-------LY-GEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
D +K + I L LY EL R+ ++ F +IGP + EPF++
Sbjct: 600 LPDREPQTKGEMIDLDSKPVQDLYRQELNREVKNRPGFRIDDRIGPFKFILEPFSI 655
>gi|427719825|ref|YP_007067819.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
gi|427352261|gb|AFY34985.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
Length = 658
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/598 (40%), Positives = 356/598 (59%), Gaps = 50/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L ++I FA GL+ +GVK +++SL +DNS RW +ADQG++ GA + VR S++ EE
Sbjct: 65 AQLAEQIRQFAAGLQSLGVKVGDRISLIADNSPRWFIADQGIMTAGAADAVRSSQAEREE 124
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL I +S S AL VE+ + ++ E L + +ILL S AP E + V ++
Sbjct: 125 LLFIIANSGSTALVVEDLKTLKKLREGL-KDLPIPLVILL----SDEAPPTEESLKVLNF 179
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++++G + N +D+AT +YTSGTTG PKGVML+H NLLHQ
Sbjct: 180 SQLMEVGAQHTLQPVKQN------------REDLATLIYTSGTTGKPKGVMLSHDNLLHQ 227
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ +V E GD LS+LP WH YER YF+ S+G +YT +R++K DL+ ++PHY
Sbjct: 228 VTVFGVVVQPEVGDTVLSILPSWHSYERTVEYFLLSQGCTQVYTNLRSVKKDLREFKPHY 287
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+ VP ++E++Y G QKQ A ++ + +L+ S Y +RI + L
Sbjct: 288 MVGVPRLWESIYEGAQKQFREQPAKKQRLINSLLGTSEKYIKAQRIAQKLDLEH------ 341
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ I+ L ARI + L+PLH L EKLVY K++ A G K +SGGG+LP HID F+E
Sbjct: 342 LDASAIEQLTARIQASALFPLHALGEKLVYAKVREATGGRVKQMISGGGALPKHIDNFFE 401
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
IGV++ GYGLTE+SPV RRP+ N++G+ G P+ TE KIVD ET LP G +G+V
Sbjct: 402 IIGVQILQGYGLTETSPVTHVRRPSRNLIGASGQPLPATETKIVDPETRVPLPTGKRGLV 461
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
++G Q+M+GY++NP AT +A+D GW ++GD+GW+ P + LVL GRAKD
Sbjct: 462 LLKGPQIMEGYYQNPEATAKAIDPQGWFDSGDLGWLTPQND----------LVLTGRAKD 511
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI 590
TIVL+ GEN+EP +E+A LRS + QI+++GQDQR GA+IVP+ E + A + LSI
Sbjct: 512 TIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQRSLGALIVPNVEALAKWAETQNLSI 571
Query: 591 V-----HADAS----ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
ADAS +L + L EL + + +I ++ EPF++
Sbjct: 572 SIQDDNVADASSQKIDLESKIIQDLFRQELNREVQNRPGYRADDRISSFRLIPEPFSI 629
>gi|17231094|ref|NP_487642.1| hypothetical protein alr3602 [Nostoc sp. PCC 7120]
gi|17132735|dbj|BAB75301.1| alr3602 [Nostoc sp. PCC 7120]
Length = 683
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 363/598 (60%), Gaps = 50/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+L +I FA GL+ +GV+ +++SL +DNS RW +ADQG++ GA++ VR S++ EE
Sbjct: 90 QQLADKIQLFASGLQALGVQAGDRISLIADNSPRWFIADQGIMTAGAVDAVRSSQAEKEE 149
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL+I HS S AL VE+ + FN++ + L +IL + P + + V ++
Sbjct: 150 LLYIVAHSGSTALVVEDLKTFNKLQDRLHDLPIQVVVIL-----TDETPPTEQSLKVLNF 204
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++I++G+ F R +++AT +YTSGTTG PKGVML++ NLLHQ
Sbjct: 205 LQLIEVGK--NHTFVPVKRKR----------NELATLIYTSGTTGKPKGVMLSYSNLLHQ 252
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ + +V + GD LS+LP WH YER Y++ S+G +YT +R++K DL++Y+P+Y
Sbjct: 253 VTTFRVVVQPKVGDTALSILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKADLKQYKPNY 312
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M++VP ++E++Y G+QKQ A ++ + + L+ +S Y +RI +G L + S
Sbjct: 313 MVAVPRLWESIYEGVQKQFREQPANKQRLIKFLLGMSEKYIKAQRIAQGTSL--DHLHAS 370
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
L LI A+++ P H+L +KLVY K++ A G K +SGGG+LP HID F+E
Sbjct: 371 SLERLI----AKVLEFAFLPFHVLGQKLVYGKVKEATGGRFKQVISGGGALPKHIDTFFE 426
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
IGV++ GYGLTE+SPV RRP N +G+ G PI TE+KIVD ET + LP G +G+V
Sbjct: 427 IIGVQILQGYGLTETSPVTNVRRPWRNFIGTSGQPIPGTEVKIVDPETRQPLPVGKRGLV 486
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
++G QVMQGY++NP AT +A+D GW ++GD+GW+ P + LVL GRAKD
Sbjct: 487 LLKGPQVMQGYYQNPEATAKAIDPQGWFDSGDLGWVTPDNE----------LVLTGRAKD 536
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-- 590
TIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+ ++
Sbjct: 537 TIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNVEALAKWAESQNLVL 596
Query: 591 -VHADASELSKEKTISL----LYGELRKWTS---------KCSFQIGPIHVVDEPFTV 634
V D S + I+L + G R+ + + ++GP ++ EPF++
Sbjct: 597 SVEDDNLTSSSSQKINLESKMIQGLFRQELNREVQNRPGYRPDDRVGPFKLILEPFSI 654
>gi|425438549|ref|ZP_18818893.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
gi|389718106|emb|CCH97904.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
Length = 639
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/596 (40%), Positives = 355/596 (59%), Gaps = 49/596 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++ +EEL
Sbjct: 45 ELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQADAEEL 104
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I S+S L VEN + ++ + + ++ I+LL + + V+ ++
Sbjct: 105 AYILADSDSQTLIVENNKTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ---TLNFK 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+++ +G E+ K T +D+AT +YTSGTTG PKGVML+H NLLHQ+
Sbjct: 161 QLMAIGAENT------------LKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQV 208
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++ P M
Sbjct: 209 RHLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP ++E+LY GIQKQ A ++ + R L+ S Y KRI + L
Sbjct: 269 VGVPRLWESLYEGIQKQFSEQPATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH----- 323
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE
Sbjct: 324 -ASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEI 382
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP G+V
Sbjct: 383 AGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVL 442
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL GRAKDT
Sbjct: 443 IRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDT 492
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI- 590
IVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS+
Sbjct: 493 IVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLSLN 552
Query: 591 ---VHAD-----ASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFT 633
+H+D +S+L +K ++L EL++ + + QI ++ EPF+
Sbjct: 553 LPDLHSDRSMILSSDLYSKKVLALYQQELKREVRNRPSYRADDQIKTFELILEPFS 608
>gi|425437694|ref|ZP_18818109.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
gi|389677326|emb|CCH93752.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
Length = 639
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/602 (40%), Positives = 355/602 (58%), Gaps = 49/602 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ +L Q+I FA L+ +GV E ++LF+DNS RW +ADQG +A GA N VR +++
Sbjct: 40 ILTYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAANAVRSAQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+EEL +I S+S L VEN + ++ + + ++ I+LL + + V+
Sbjct: 100 DAEELAYILADSDSQTLIVENKQTLGKLLAKI-PELPLKLIVLLTDEDPATGAISVQ--- 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ +++ +G E+ K T G +D+AT +YTSGTTG PKGVML+H N
Sbjct: 156 TLNFKQLMAIGAENT------------LKPITKGENDLATLIYTSGTTGQPKGVMLSHGN 203
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+R+L I + GD+ LS+LP WH YER+C YF ++G +YT++R K DL+++
Sbjct: 204 LLHQVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQF 263
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P M+ VP ++E+LY GIQKQ A ++ + + + S Y KRI + L
Sbjct: 264 SPQLMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLH 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ I+ L ARI +L+PLH + +KLVY KI+ A+G K VSGGGSL H+D
Sbjct: 324 ------ASGIERLKARIQSLLLYPLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLD 377
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE G+ + VGYGLTE+SPV RR N+ GS G P+ TEI IVD + EVLP
Sbjct: 378 TFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEK 437
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+ G LVL G
Sbjct: 438 HGLVLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT----------AAGDLVLTG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAK 586
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+ + + + +
Sbjct: 488 RAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKALGALIVPNLDILANWVQEQ 547
Query: 587 RLSI----VHAD-----ASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPF 632
+LS+ H+D +S+L +K + L EL++ + QI ++ EPF
Sbjct: 548 KLSLNLPDPHSDRSTILSSDLYSKKVLDLYQQELKREVRNRPGYRTDDQIKTFELILEPF 607
Query: 633 TV 634
++
Sbjct: 608 SL 609
>gi|428774560|ref|YP_007166348.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
gi|428688839|gb|AFZ48699.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
Length = 636
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/591 (40%), Positives = 359/591 (60%), Gaps = 56/591 (9%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
FA GL+ +G++ K+SLF+DNS RWL+ADQG++ GA++ VR S + ELL+I + S+
Sbjct: 55 FATGLQSLGIEAGNKVSLFADNSPRWLIADQGIIMAGAVDAVRSSVAEKNELLYILDDSD 114
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
SVAL V+N E ++ L S ++ +ILL ++ PV+++ I+DLG +
Sbjct: 115 SVALVVQNLECLQKLRPELDS-YPLKTVILLSDEEFEGG----LSCPVYNFFSIMDLGVQ 169
Query: 183 SRKAFSDSNDARKHYKYETIGSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
+ I D D+AT +YTSGTTG PKGVML+H+NLLHQ+R+L I
Sbjct: 170 G--------------SFTPIKGDIDDLATLIYTSGTTGKPKGVMLSHRNLLHQVRNLETI 215
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
+ GD+ L++LP WH YERA YF+ SRG L+YT++R K DL+ Y+P+YM+ VP +
Sbjct: 216 IQPSKGDRILTILPSWHSYERAAEYFLLSRGTTLIYTSIRYFKQDLKDYKPNYMVGVPRL 275
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E++Y G+QK F S +++V + +S Y KR G L PS + D
Sbjct: 276 WESIYEGVQKN-FRDSGKQKLV-NFFLGMSQGYLDGKRAQSGLDL--QNLNPSGM----D 327
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
+ + +P H+L +KLVY K++ +G S KA +SGGGSL HID F++ + + +
Sbjct: 328 KFVGTLKTIVFYPFHILGDKLVYTKVREGVGNSIKAWISGGGSLAKHIDNFFQIVNIPLL 387
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTE+SPV ARR N++G+ G P+ TEI I ET LP G KG+V +RG+QV
Sbjct: 388 VGYGLTETSPVTNARRMNRNIVGASGQPLPETEIMIAHPETKTPLPQGEKGLVFIRGTQV 447
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
MQGY+K P AT +A++EDGW ++GD+GW+ P + LV+ GRAKDTIVLS G
Sbjct: 448 MQGYYKKPEATAKAINEDGWFDSGDLGWVTPDND----------LVITGRAKDTIVLSNG 497
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK--RLSIVHADA-- 595
EN+EP LE+ LRS+ + QI+++GQDQ+ GA+IVP+ E + AK ++S+ D
Sbjct: 498 ENIEPQPLEDVCLRSAYVDQIMLVGQDQKYLGALIVPNLEALSAWAKENKVSLKIPDTGA 557
Query: 596 -------SELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
S+L ++ +SL EL R+ ++ + +I ++ EPF++
Sbjct: 558 SREEVENSDLYSKEVMSLFKQELNREVKNRPGYRPDDRIAVFELILEPFSI 608
>gi|428769075|ref|YP_007160865.1| long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
gi|428683354|gb|AFZ52821.1| Long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
Length = 642
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/595 (40%), Positives = 358/595 (60%), Gaps = 54/595 (9%)
Query: 60 ILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
I FA L+ + +K EK++LF+DNS RWL+ADQG++ G + VR + EELL+I
Sbjct: 54 IKQFASALQSLDIKSGEKIALFADNSPRWLIADQGIIINGCADAVRSPLADREELLYILE 113
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP--VFSYDEII 177
HS+S L +++ ++ L +++F++LL + ++ + P +++ + +
Sbjct: 114 HSDSSVLVIQDVASLEKLRPEL-DDFSLKFVVLLSDE------EVNRDYPHTTYNFSQFL 166
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
LG A++ + + + D +AT +YTSGTTG PKGVML+H+NLLHQ+ L
Sbjct: 167 QLG------------AQRPFIFVPVEKDTLATLIYTSGTTGKPKGVMLSHRNLLHQVCHL 214
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
I+ + GD+ LS+LP WH YERA YF+ SRG L+YT +R K DL++ +PH+MI V
Sbjct: 215 DVILQPKKGDRILSILPSWHSYERAAEYFLLSRGTTLIYTNIRYFKQDLKKIKPHHMIGV 274
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P ++E++Y G+QKQ S ++ + + S Y KRI G L PS
Sbjct: 275 PRLWESIYEGVQKQFRDGSKTQQKLVNFFLATSEKYIKAKRIKNGLDL--EHLNPSSGQK 332
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGV 416
L A+I +L P+H L +KL+Y K++ +G + VSGGGSL HID F++ +G+
Sbjct: 333 LT----AKITSTLLLPVHKLGDKLIYTKVREGVGGCIQTWVSGGGSLAKHIDNFFQIVGI 388
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ VGYGLTE+SPV ARR + N++G+ G PI TEIKIV+ ET E LP G KG+V +RG
Sbjct: 389 PLIVGYGLTETSPVTNARRISRNIVGASGQPIPETEIKIVNPETRETLPQGEKGLVFIRG 448
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
+QVMQGY+KNP AT +A+DE+GW ++GD+GW+ P + LV+ GRAKDTIVL
Sbjct: 449 TQVMQGYYKNPEATTKAIDEEGWFDSGDLGWVTPDND----------LVITGRAKDTIVL 498
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR------LSI 590
S GEN+EP LE+A +RS I QI+V+GQDQ+ GA+IVP+ E + + L
Sbjct: 499 SNGENIEPQPLEDACVRSPYIDQIMVVGQDQKYLGALIVPNLEALQKWGEEQNRILNLPS 558
Query: 591 VHADASELSKEK-----TISLLYGEL-RKWTSKCSFQIGP----IHVVDEPFTVN 635
V A+ +E+ K +SL EL R+ ++ ++I ++ EPF+++
Sbjct: 559 VGANRAEIEKSDLYSSGVLSLYKQELAREVKNRPGYRIDDRISVFELILEPFSID 613
>gi|427421674|ref|ZP_18911857.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
gi|425757551|gb|EKU98405.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
Length = 641
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/591 (39%), Positives = 352/591 (59%), Gaps = 47/591 (7%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L ++I FA L+++G+KP++K++LFSDN RWLVADQG++ GA++ VRGS++ +EL
Sbjct: 58 ELNEQIKQFAASLQILGIKPQDKIALFSDNQPRWLVADQGIMTVGAVDAVRGSQADKDEL 117
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I +S+SVA+ V++ N++A+ L K ++FI+LL S P + + ++
Sbjct: 118 AYILENSDSVAMIVQDQATLNKLADCLGDKN-LQFIVLL----SDETPQLETTTKLLNFT 172
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSD--DIATYVYTSGTTGNPKGVMLTHKNLLH 232
++++LG + E + D D+AT +YTSGT+G PKGVML+ NLL
Sbjct: 173 QLMELG--------------VGVELEAVKCDRTDLATLMYTSGTSGRPKGVMLSQDNLLS 218
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 292
QI +V + G K +S+LP WH YER YF S+G++ +YT +R +K DL+ Y+P+
Sbjct: 219 QISGACSVVHPKPGSKVMSILPIWHCYERTFEYFTLSQGVQQVYTNIRYVKKDLKAYKPN 278
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
YM+ VP ++E++Y G+QKQ +++ + + S Y A KRI E L
Sbjct: 279 YMVGVPRLWESIYEGVQKQFREQPESKQKLINFFLHQSQRYIAAKRIAENLSL------- 331
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
Y + D A I CA+L P H L + +VYKKI+ A G VSGGGS+ H++ FY
Sbjct: 332 DYSPSAFDRAMASIQCAVLLPFHKLGDSMVYKKIREATGGDINFVVSGGGSIADHLEDFY 391
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
E I V + GYGLTE+SP+ RRP N+ G+ G P+ TE +IVD ++ + +P G KG+
Sbjct: 392 EIIDVAILGGYGLTETSPITHVRRPWQNLRGADGQPLPGTETRIVDLDSRQDVPQGQKGL 451
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V VRG Q+MQGY+KNP AT +A+D DGW +TGD+G I G LV+ GRAK
Sbjct: 452 VLVRGPQIMQGYYKNPDATSKAIDPDGWFDTGDLGKIT----------ANGDLVITGRAK 501
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
DTIVL++GEN+EP +E A RS + QI+++GQDQ+ GA+IVP+ E + A I
Sbjct: 502 DTIVLTSGENIEPQPIENACARSKYVDQIMLVGQDQKVLGALIVPNLEALSQWATTQGIT 561
Query: 592 HADAS---ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
D + L+ K +L EL + + +IGP ++ EPF++
Sbjct: 562 IDDDNPVESLNNSKVQTLFKQELTREVKARPGHRPDERIGPFTLLSEPFSM 612
>gi|409990099|ref|ZP_11273528.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
gi|291566551|dbj|BAI88823.1| probable long-chain-fatty-acid--CoA ligase [Arthrospira platensis
NIES-39]
gi|409939040|gb|EKN80275.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
Length = 647
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/607 (39%), Positives = 355/607 (58%), Gaps = 58/607 (9%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKL----SLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
S L +I FA GL+ +GV+P E L +LF+D+S RW++ADQG+L GA NVVRG+ +
Sbjct: 47 SDLWTQIQQFAAGLQQLGVEPAEDLPSRVALFADDSPRWMIADQGILTAGAANVVRGATA 106
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE-- 167
+EL +I +S S L V+N +++ E +RF++LL + DI E
Sbjct: 107 DPQELAYILQNSGSTGLVVDNLALLHKL-EKAIQDLPIRFVVLLSDE------DITAEDS 159
Query: 168 --IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
IP+ ++ +++ G + T +D+AT +YTSGTTG PKGVML
Sbjct: 160 LSIPIVNFSQLMTKGED-----------MTLLNPPTTKLEDLATLLYTSGTTGKPKGVML 208
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
TH+N LHQ+ ++ D++ + G+ LS+LP WH R+ Y+ SRG ++YT +R K D
Sbjct: 209 THRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYYFLSRGTMVIYTNIRYFKQD 268
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
LQ ++P YM+SVP ++E++Y QKQ A R+ + +S Y +RI + +
Sbjct: 269 LQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFFFGMSNRYIEARRIVQKLTI 328
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ + AL A++ +L P+H L +KL+Y+K++ A+G K +SGGGSL
Sbjct: 329 PGQESNNNSSTAL-----AKLQTIVLTPVHALGDKLIYQKVRQAVGGKLKFAISGGGSLA 383
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
MH++ FYE +G+ + VGYGLTE++PV+ ARRP N+ GS G PI TEI+I+D ET +
Sbjct: 384 MHLENFYEIVGIDLLVGYGLTETAPVLTARRPGHNLRGSAGRPIPETEIRIIDPETRQTY 443
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G KG+V RG QVM+GYF+NP AT +A+D +GW +TGD+GW+ P L
Sbjct: 444 EPGHKGLVLARGPQVMRGYFQNPEATDKAIDPEGWFDTGDLGWLTPQKD----------L 493
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
VL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQDQ+ GA+IVP+ + +
Sbjct: 494 VLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQDQKSLGALIVPNLDALKQW 553
Query: 585 AKRLSI---VHADASELSKEKTI--------SLLYGELR-KWTSKCSF----QIGPIHVV 628
A + V + + E I SL EL + ++ SF +IGP ++
Sbjct: 554 ASGQGLGLQVPGEEQQGEAENAIAIDSQPIQSLFRQELTLQVKNRPSFRPDDRIGPFRLI 613
Query: 629 DEPFTVN 635
EPFT++
Sbjct: 614 LEPFTID 620
>gi|428224633|ref|YP_007108730.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
gi|427984534|gb|AFY65678.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
Length = 655
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/598 (40%), Positives = 361/598 (60%), Gaps = 49/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEE--------KLSLFSDNSCRWLVADQGMLATGAINVVR 105
S+L Q+I FA GL+ + V E +++LF+D+S RWL+ADQG + G +VVR
Sbjct: 63 SQLSQQIGQFAAGLQALQVHAEPWESEDLPPRVALFADDSPRWLIADQGSMMAGTADVVR 122
Query: 106 GSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV 165
S++ +ELL I S + L VEN ++ L ++ IILL + S + +
Sbjct: 123 SSQADRDELLFILEDSGARTLIVENVATLKKLQAGL-GNLPLKQIILLSDETS----EAI 177
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
+PV ++ ++++LGR D + ++ D +AT +YTSGTTG PKGVML
Sbjct: 178 AGVPVANFSQVMELGR-------DRSPEPIQWR-----KDVLATLIYTSGTTGKPKGVML 225
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
TH NLLHQI +L +V + GD+ L++LP WH + R YF+ ++G +YT++R++K D
Sbjct: 226 THGNLLHQITTLGVVVQPKPGDRVLTLLPTWHSFGRVGEYFLLAQGCTQIYTSIRHVKAD 285
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
++++P +M+ VP ++E++Y G+QKQ +R+ + L+ S Y KR+ +G L
Sbjct: 286 FRKHKPQFMVGVPRLWESIYEGVQKQFREQPESRQKLINTLLDFSRQYVEAKRVAQGLLL 345
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLP 404
+ +QP L I A + A WPLH L E+LVY+K++ A G V SGGGSL
Sbjct: 346 S--AEQPGGLAKAI----ASLKAAAFWPLHQLGERLVYRKVREATGGELTCVISGGGSLA 399
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
MH+++F+E +GV V VGYGLTE+SPV++ARR N+ GS G PI T +KIVD ET + L
Sbjct: 400 MHLEMFFEIVGVDVLVGYGLTETSPVLSARRSWHNLRGSSGRPIPGTALKIVDPETRQPL 459
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G +G+V +G Q+M GYF+NP+AT +A+D +GW +TGD+GW+ P++ L
Sbjct: 460 AFGDRGLVLAQGPQIMGGYFRNPTATAKAIDPEGWFDTGDLGWMTPNYD----------L 509
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
VL GRAKDTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP+ E +
Sbjct: 510 VLTGRAKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPNLEALQQW 569
Query: 585 AKRLSIVHA-DAS-ELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 635
A I + DAS +L K L+ EL + + +IGP ++ EPF+V
Sbjct: 570 ALGAGITSSPDASPDLQHPKVQELIRQELNREVRDRPGYRPDDRIGPFRLMAEPFSVE 627
>gi|56750633|ref|YP_171334.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
gi|56685592|dbj|BAD78814.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
Length = 649
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/591 (39%), Positives = 353/591 (59%), Gaps = 46/591 (7%)
Query: 55 KLEQEILDFAEGLRVIGVKPE------EKLSLFSDNSCRWLVADQGMLATGAINVVRGSR 108
+L +I FA GL +GV +L+ F+DNS RWL+ADQG L GA N VRG++
Sbjct: 64 ELAIQIQAFAAGLLALGVPTSTADDFPPRLAQFADNSPRWLIADQGTLLAGAANAVRGAQ 123
Query: 109 SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE-- 166
+ ELL++ S S+ L VE+ ++ L S +++F+I+L + ++VE
Sbjct: 124 AEVSELLYVLEDSGSIGLIVEDAALLKKLQPGLAS-LSLQFVIVL-------SDEVVEID 175
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
+ V + +++++GR + D +AT +YTSGTTG PKGVML+
Sbjct: 176 SLRVVGFSDVLEMGRS------------LPAPEPILQLDRLATLIYTSGTTGRPKGVMLS 223
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 286
H NLLHQ+ +L +V + GD LS+LP WH YERAC YF+ S+G +YT +RN+K D+
Sbjct: 224 HGNLLHQVTTLGVVVQPQPGDTVLSILPTWHSYERACEYFLLSQGCTQVYTTLRNVKQDI 283
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
++Y+P +M+SVP ++E++Y G+QKQ A +R + +S Y +R ++G L
Sbjct: 284 RQYRPQFMVSVPRLWESIYEGVQKQFREQPAKKRRLIDTFFGLSQRYVLARRRWQGLDLL 343
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
+ P+ +A R++ L PLH L ++LVY K++ A G + +SGGGSL +
Sbjct: 344 ALNQSPAQRLA----EGVRMLA--LAPLHKLGDRLVYGKVREATGGRIRQVISGGGSLAL 397
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
H+D F+E +GV + VGYGLTE+SPV+ RRP N+ GS G PI T I+IVD ET E P
Sbjct: 398 HLDTFFEIVGVDLLVGYGLTETSPVLTGRRPWHNLRGSAGQPIPGTAIRIVDPETKENRP 457
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
+G +G+V +G Q+MQGYF P AT +A+D +GW +TGD+G+I G LV
Sbjct: 458 SGDRGLVLAKGPQIMQGYFNKPEATAKAIDAEGWFDTGDLGYIVGE----------GNLV 507
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
L GRAKDTIVL+ GEN+EP +E+A LRSS I QI+++GQD++ GA+IVP++E + + A
Sbjct: 508 LTGRAKDTIVLTNGENIEPQPIEDACLRSSYISQIMLVGQDRKSLGALIVPNQEAIALWA 567
Query: 586 KRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQIGPIHVVDEPFTVN 635
I D + ++ L E+R + +IGP +++EPF++
Sbjct: 568 SEQGISQTDLQGVVQKLIREELNREVRDRPGYRIDDRIGPFRLIEEPFSME 618
>gi|254411220|ref|ZP_05024997.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196181721|gb|EDX76708.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 672
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/540 (42%), Positives = 335/540 (62%), Gaps = 45/540 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKP-----------EEKLSLFSDNSCRWLVADQGMLAT 98
+F ++L ++I A GL+ + P +++L +DNS RWL+ADQG++
Sbjct: 61 IFTYTQLVRQIQQLAAGLQTLFDNPVIKQEQESSDLPPRVALIADNSPRWLIADQGIMTA 120
Query: 99 GAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS 158
GA NVVR +++ EEL +I HS S+AL VE+ + ++ L + ++F+ILL S
Sbjct: 121 GAANVVRSAQADPEELRYILEHSGSIALVVEDTKTLTKLKPHL-DELPIQFVILL----S 175
Query: 159 SVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
P +++ VF++ +++ +G S+ R+ +AT +YTSGTTG
Sbjct: 176 DEEPPAEDKLKVFNFSQVMSMG--SKATLQPIQATRQ----------TLATLMYTSGTTG 223
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
PKGVMLTH NLLHQ+ + ++ + GD+ LS+LP WHVYER YF+ S+G +YT
Sbjct: 224 KPKGVMLTHGNLLHQVTTFGIVLQPKGGDRILSILPTWHVYERTVEYFLLSQGCTQIYTT 283
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
+R++K DL+ ++P YMI VP ++E++Y G+QKQ ++ + L+ IS Y +R
Sbjct: 284 IRHVKADLKAFKPIYMIGVPRLWESIYDGVQKQFREQPPNKQKLVFTLLDISQRYIKARR 343
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 397
I +G L NQ PS L + L A I +L P H LA+KL+Y+ ++ A G K +
Sbjct: 344 IAQGLDL--NQLNPSPL----ERLSASIQALLLLPAHKLADKLIYQTVREATGGQIKTII 397
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGGGSL MH++ F+E G+++ VGYGLTE+SPV RR N+ S G P+ T+I+IVD
Sbjct: 398 SGGGSLAMHLENFFEIAGIEILVGYGLTETSPVTNVRRMERNLRRSSGLPMPGTQIRIVD 457
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
ET + LP G +G+V V+G QVMQGY+KNP AT +A+D DGW +TGD+GW+ P+H
Sbjct: 458 PETRKPLPIGEQGLVLVKGPQVMQGYYKNPEATAKAIDSDGWFDTGDLGWVTPNHD---- 513
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+
Sbjct: 514 ------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPN 567
>gi|428216435|ref|YP_007100900.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
gi|427988217|gb|AFY68472.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
Length = 626
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/590 (40%), Positives = 347/590 (58%), Gaps = 62/590 (10%)
Query: 60 ILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
I F GLR +GVK +K++L +DNS RWL+ADQG+LA GA N R S++ ELL+I
Sbjct: 55 INQFGAGLRSLGVKAGDKVALIADNSSRWLIADQGILAIGAANATRSSQAERTELLYIVE 114
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP--VFSYDEII 177
HS+S AL VEN ++ L ++ I+LL EE P ++Y ++
Sbjct: 115 HSDSTALVVENLATLQKLQPDL-QDLPIKLIVLLSD----------EEPPEGAYNYQQVC 163
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
D G + D D + I D +AT +YTSGT+G PKGVMLTH N+L Q+R
Sbjct: 164 DRGVDK-----DLGDPQ-------ITRDTLATLIYTSGTSGKPKGVMLTHGNILTQVRGG 211
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
+V GD+ LS+LP WH YER+C YF+FS+G+ +YT +R +K+DL ++P YM++V
Sbjct: 212 TAMVKPFPGDRILSILPTWHSYERSCEYFLFSQGVTQIYTNLRKIKNDLATFKPQYMLAV 271
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P ++E++Y GIQ++ SA +R + L+ S Y +R+ G LT +
Sbjct: 272 PRLWESIYEGIQRKFDAESATKRKLINFLLNASNTYIKARRVVNGLSLTGGNQ------- 324
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 416
L AR+ PL+ LA+KLV+ KI++ IG K SGGG+L H++LFYEA +
Sbjct: 325 ----LKARLTMFAYAPLYWLAKKLVFDKIRAGIGGEFKYICSGGGALQPHLELFYEAAQI 380
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
++ VGYGLTE+SP++ ARRP N+ + G P+ EIKIVD ET E P G +G+V RG
Sbjct: 381 EILVGYGLTETSPMVTARRPERNLRTTSGIPLPDAEIKIVDPETKEAFPPGKRGLVMARG 440
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
+MQGY+KNP AT +A+D DGW NTGD+G++ + L + GRAKDTIVL
Sbjct: 441 PMIMQGYYKNPEATNKAIDADGWFNTGDLGFLTHKND----------LTITGRAKDTIVL 490
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA- 595
S GEN+EPL +E+A S+ I QI+++GQDQR+ GA+IVP+ L A + ++ AD+
Sbjct: 491 SNGENIEPLSIEDACSSSTYIDQIMLVGQDQRQLGALIVPN----LKALEVDGLLPADSE 546
Query: 596 -----SELSKEKTISLLYGELRKWTSKCSFQ-----IGPIHVVDEPFTVN 635
L+++K ++ EL + Q IGP + EPF ++
Sbjct: 547 LAESIDLLNQDKIRNVFRSELTRKVQDRPGQSINDRIGPFEFLPEPFDIS 596
>gi|158338658|ref|YP_001519835.1| long-chain-fatty-acid-CoA ligase [Acaryochloris marina MBIC11017]
gi|158308899|gb|ABW30516.1| long-chain-fatty-acid-CoA ligase, putative [Acaryochloris marina
MBIC11017]
Length = 646
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/555 (41%), Positives = 338/555 (60%), Gaps = 36/555 (6%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L +++ FA L+ +GVKP ++++LF+DNS RW +ADQG + GA+NVVR S++S EEL
Sbjct: 55 ELNRQVQRFAASLQALGVKPGDRVALFADNSSRWFIADQGSIMAGAVNVVRSSQASPEEL 114
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++I +S + L VE+ +++ + +K ++ + LL VA + + V ++
Sbjct: 115 VYILENSGATYLLVEDAATLSKL-QPFLTKLPLKLVALL--SDEDVANNGQSQ--VLNFP 169
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I G + A R+H +AT +YTSGT+G PKGVML+H NLLH I
Sbjct: 170 QIFQEG--THGAVRAVPLDREH----------LATLIYTSGTSGKPKGVMLSHGNLLHII 217
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++ V E GD+ LS+LP WH + R Y+ S+G +YT++RNLK DLQ Y+PHYM
Sbjct: 218 TAMPAAVQPEVGDRILSILPTWHSFGRLVDYYFLSQGCTQIYTSIRNLKGDLQTYKPHYM 277
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
SVP ++E+LY G+QK+ A R+ + IS Y +R +G + N PS
Sbjct: 278 GSVPRLWESLYEGMQKKFRGEPATRQKLINTFFGISQKYILARRTQQGLDI--NNLNPSG 335
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
L + A++ L PLH L +++VY KI+ A+G K SGGGSL MH++ F+EA
Sbjct: 336 LQRFL----AQLQMLFLGPLHQLGDRIVYTKIRQAMGGQFKQSFSGGGSLAMHLETFFEA 391
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+++ VGYGLTE+SPV+ +RR N+ S G PI TEI+IVD +T + LP G +G+V
Sbjct: 392 VGIELIVGYGLTETSPVLTSRRAEHNLRRSAGKPIPKTEIRIVDPQTRQTLPTGQQGLVI 451
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG QVMQGY++NP AT + +D++GW +TGD+GW+ P LVL GRAKDT
Sbjct: 452 VRGPQVMQGYYQNPEATAKVIDQEGWFDTGDLGWLTPTQD----------LVLTGRAKDT 501
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLSIV 591
IVLS GEN+EP LE+A RSS I QI+V+GQDQR GA+IVP D + + + SI
Sbjct: 502 IVLSNGENIEPQPLEDACARSSFIDQIMVVGQDQRSLGALIVPNLDALQQWASEQNASIQ 561
Query: 592 HADASELSKEKTISL 606
H + K ++
Sbjct: 562 HPGNTPTPGSKVLTF 576
>gi|209524077|ref|ZP_03272628.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|423066015|ref|ZP_17054805.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
gi|209495452|gb|EDZ95756.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|406712514|gb|EKD07699.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
Length = 648
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/607 (39%), Positives = 353/607 (58%), Gaps = 58/607 (9%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKL----SLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
S L +I FA GL+ +GV+P E L +LF+D+S RW++ADQG+L GA NVVRG+ +
Sbjct: 48 SDLWTQIQQFAAGLQQLGVEPAEDLPNRVALFADDSPRWMIADQGILTAGAANVVRGATA 107
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE-- 167
+EL +I +S S L V+N +++ E +RF++LL + DI E
Sbjct: 108 DPQELAYILQNSGSTGLVVDNLALLHKL-EKAIQDLPIRFVVLLSDE------DITAEDS 160
Query: 168 --IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
IP+ ++ ++I G + T +D+AT +YTSGTTG PKGVML
Sbjct: 161 LSIPIVNFSQLITKGED-----------MTLLNPPTTKLEDLATLLYTSGTTGKPKGVML 209
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
TH+N LHQ+ ++ D++ + G+ LS+LP WH R+ Y+ SRG ++YT +R K D
Sbjct: 210 THRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYYFLSRGTMVIYTNIRYFKQD 269
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
LQ ++P YM+SVP ++E++Y QKQ A R+ + +S Y +RI + +
Sbjct: 270 LQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFFFGMSNRYIQARRIVQKLTI 329
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ AL A++ +L P+H L +KL+Y+K++ A+G K +SGGGSL
Sbjct: 330 PGQGSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQKVRQAVGGKLKFAISGGGSLA 384
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
MH++ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS G PI TEI+I+D ET +
Sbjct: 385 MHLENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGSAGRPIPETEIRIIDPETRQTC 444
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G KG+V RG QVM GYF+NP AT +A+D +GW +TGD+GW+ P L
Sbjct: 445 EPGYKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTGDLGWLTPQKD----------L 494
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
VL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQDQ+ GA+IVP+ + +
Sbjct: 495 VLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQDQKSLGALIVPNLDALKQW 554
Query: 585 AKRLSI---VHADASELSKEKTI--------SLLYGELR-KWTSKCSF----QIGPIHVV 628
A + V + + E I SL EL + ++ SF +IG ++
Sbjct: 555 ASGQGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELNLQVKNRPSFRPDDRIGQFRLI 614
Query: 629 DEPFTVN 635
EPF+++
Sbjct: 615 LEPFSID 621
>gi|300868267|ref|ZP_07112896.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
gi|300333702|emb|CBN58080.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
Length = 651
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/595 (40%), Positives = 354/595 (59%), Gaps = 50/595 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEE------KLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++L Q+I FA GL+ +G++ E +++LF+DNS RW++ADQG++ GA +VVRG+
Sbjct: 64 AELYQQIQQFAAGLQALGIESTEEGDVPDRIALFADNSPRWMIADQGIMTAGAADVVRGA 123
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ EELL+I S S AL VEN ++ + L ++FIILL S P+ E
Sbjct: 124 GADPEELLYILQDSGSTALIVENSALLRKLRDRLPD-LPIQFIILL----SDEEPEKSET 178
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ V + E+I G + + +N R+ +AT +YTSGTTG PKGV+LTH
Sbjct: 179 LTVIKFSEVIATG--ANRPLKPTNHKRQ----------TLATLLYTSGTTGKPKGVILTH 226
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 287
NLLHQI + I+ + G+ LS+LP WH YER Y++ S+G +YT++R K D +
Sbjct: 227 GNLLHQITTFGVILQPQPGESALSILPSWHAYERTVEYYLLSQGCTQIYTSIRYFKQDFK 286
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+P YM+SVP +++++Y QKQ A ++ + L+ S Y +RI + L
Sbjct: 287 TCKPQYMVSVPRIWDSIYEAAQKQFREQPANKQKLVNFLLGTSLKYIQSRRIAQDLTLNL 346
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
P+ L A+I +L PLH + EKL+Y+K++ A G K +SGGGSL MH
Sbjct: 347 EPPTPA------KKLTAQIKTILLLPLHAIGEKLIYQKVRQATGGQFKCAISGGGSLAMH 400
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+D F+E G+ + VGYGLTE+SPV+ RRP N+ GS G P+ TEIKIVD ET + LP
Sbjct: 401 LDNFFEITGINLLVGYGLTETSPVLTVRRPWHNLRGSAGQPLPETEIKIVDPETRKPLPI 460
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G G+V RG Q+M GY+ NP AT +A+D++GW +TGD+GW+ G L+L
Sbjct: 461 GQIGLVLGRGPQIMGGYYLNPQATAKAIDKEGWFDTGDLGWMT----------SGNDLIL 510
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GRAKDTIVL+ GEN+EP +E+A+LRS+ I QI+++GQDQ+ GA+IVP+ E V K
Sbjct: 511 TGRAKDTIVLTNGENIEPQPIEDASLRSAYIDQIMLVGQDQKFLGALIVPNHEAV---QK 567
Query: 587 RLSIVHADASEL--SKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
++ ++ E+ + + L EL R+ ++ + +IG ++ EPF+V
Sbjct: 568 WIASLNPSLQEIDWNSKAVQDLFRQELNREVQNRPGYRPDDRIGSFRLILEPFSV 622
>gi|218437444|ref|YP_002375773.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
gi|218170172|gb|ACK68905.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
Length = 638
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/606 (39%), Positives = 356/606 (58%), Gaps = 56/606 (9%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ ++L ++I FA GL+ +GV+ K++LF+DN RW +ADQG++ GA+N VR S++
Sbjct: 40 IITYTELCEQIEQFARGLQALGVESGAKIALFADNCPRWFIADQGIIMAGAVNAVRSSQA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+ELL+IY S+S+AL VE+ + ++ L + +F+ILL + S + +
Sbjct: 100 ERQELLYIYTDSDSIALVVEDLKTLQKLRPEL-DQLNTQFVILLSDEYSPTD----DPLK 154
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ ++ +++DLG S F+ + + +D+AT +YTSGTTG PKGVMLTH N
Sbjct: 155 ILNFKQLLDLG--SNHPFNPVSRTK----------EDLATLLYTSGTTGKPKGVMLTHGN 202
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
L++I S + GD+ LS+LP WH YER Y++ S+G +YT +RN K+DL+++
Sbjct: 203 FLYEINSFGVAFQPDPGDRVLSILPSWHAYERTVEYYVLSQGSTQIYTNLRNFKNDLKQF 262
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+PH M+ VP ++E++Y IQKQ A +R + + +S Y KRI F L
Sbjct: 263 KPHLMVGVPRLWESIYESIQKQFREQPAKKRKIVNFFLNLSENYVIAKRIANNFSLDHLD 322
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
V+ + L AR+ +L PLH + ++LVY+KI+ +G KA +SGGGSL HID
Sbjct: 323 ------VSASERLMARVKATVLAPLHRVGDRLVYQKIREGVGGKVKAWISGGGSLARHID 376
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE + + V VGYGLTE+SPV R NV GS G P+ TEI+IVD ET + LP
Sbjct: 377 TFYEIVNIPVLVGYGLTETSPVTNVRTLDHNVRGSSGPPLPRTEIRIVDPETRQDLPPKE 436
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
KG+V +RG QVMQGY+K P AT +A+D GW ++GD+G + P + LVL G
Sbjct: 437 KGLVLIRGPQVMQGYYKKPEATAKAIDPQGWFDSGDLGCVTPIND----------LVLTG 486
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD--------KEE 580
RAKDTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ KE+
Sbjct: 487 RAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKALGALIVPNLDALSAWGKEQ 546
Query: 581 VL------MAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVD 629
L + A R I H S L + +LL EL + + QI ++
Sbjct: 547 QLDLDIPDIHASRDRIKH---SSLYDKPVQTLLRQELNQRVKDRPGYRIDDQIKVFELIL 603
Query: 630 EPFTVN 635
EPF+++
Sbjct: 604 EPFSID 609
>gi|428307720|ref|YP_007144545.1| long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
gi|428249255|gb|AFZ15035.1| Long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
Length = 662
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/529 (41%), Positives = 332/529 (62%), Gaps = 34/529 (6%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V S+L + I FA GL+ +G+K +++SLF+DNS RW +ADQG++ GA++ VR ++
Sbjct: 59 VITYSQLNKLIQQFAAGLQSLGIKAGDRISLFADNSPRWFIADQGIMTAGAVDAVRSGQA 118
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
EEL I +S S AL VE+ + N++ + L + ++ I+LL S P+ + I
Sbjct: 119 EQEELRFIMANSGSTALVVEDLKTLNKLRDYL-NDLPIKLIVLL----SDEEPEELANIK 173
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ ++ ++++G S + K K D +AT +YTSGTTG PKGVML+H N
Sbjct: 174 MLNFSGLVEVGS------SVQLEPVKQTK------DTLATLIYTSGTTGQPKGVMLSHGN 221
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+ +L ++ + G K LS+LP WH YER+ YF+ S+G +YT +R +K DL+ +
Sbjct: 222 LLHQVTTLGTVIKPQQGSKVLSILPSWHSYERSAEYFLLSQGCTQLYTNLRYIKQDLKTF 281
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P+YMI+VP ++E++Y G QKQ + ++ + IS Y +R+ +G L
Sbjct: 282 KPNYMIAVPRLWESIYEGAQKQFREQPSNKQKLINTFFSISQRYIKARRLAQGLDLENLN 341
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHID 408
+ ++ A++ ++L P+H L E+LVY K++ A G V SGGGSL H++
Sbjct: 342 PSATEKIS------AKVQASVLAPVHALGERLVYGKVREATGGEIIQVISGGGSLAKHLE 395
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+E IGV + VGYGLTE+SPV ARRP N+ GS G PI TEIKIV+ ET + LP G
Sbjct: 396 NFFEIIGVNILVGYGLTETSPVTNARRPWHNLRGSSGKPIPGTEIKIVNPETRQPLPTGE 455
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V ++G QVMQGY++NP AT +A+D +GW ++GD+GW+ + LVL G
Sbjct: 456 RGLVLIKGPQVMQGYYQNPEATAKAIDSEGWFDSGDLGWVTKEND----------LVLTG 505
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
RAKDTIVL+ GEN+EP +E+A LRS+ + QIV++GQDQ+ GA+IVP+
Sbjct: 506 RAKDTIVLTNGENIEPQPIEDACLRSAYVDQIVLVGQDQKSLGALIVPN 554
>gi|428207002|ref|YP_007091355.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008923|gb|AFY87486.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
Length = 674
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/531 (41%), Positives = 329/531 (61%), Gaps = 34/531 (6%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
F ++L Q I FA GL+ +GV +++ L +DNS RW++ADQG+L G ++VVR S++
Sbjct: 60 TFTYNQLYQHIQIFAAGLQALGVAAGDRVGLIADNSPRWMIADQGILTAGGVDVVRSSQA 119
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+ELL+I HS S L +E+ + +++ E L K ++ ++LL S D + +
Sbjct: 120 EKQELLYILEHSGSTTLVIEDRKTLSKVREGL-DKLPIQLVVLL----SDEILDESDSLK 174
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ ++ +++ +G N D +AT +YTSGTTG PKGVML+H N
Sbjct: 175 IMNFSQLMAVGENQPLQPVAQN------------RDTLATLMYTSGTTGKPKGVMLSHGN 222
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQ+ S +V E GD+ LS+LP WH YER+ YF+ S+G +YT +R++K DL+ +
Sbjct: 223 LLHQVTSFGAVVQPEIGDRILSILPVWHCYERSVEYFLLSQGCTQIYTNIRHVKADLKAF 282
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M+ VP ++E++Y G+QKQ ++ + +L+ IS Y +RI G L
Sbjct: 283 KPRLMVGVPRLWESIYEGVQKQFRDQPVKKQRLIYSLLNISQRYIKARRIVRGLALDNLY 342
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P + L A I A+L P+H LA++L+YK+++ A G + +SGGGSL MH++
Sbjct: 343 PSP------LQRLQAGIQTAVLAPIHNLADRLIYKQVREATGGRIRQVISGGGSLAMHLE 396
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+E +GV++ VGYGLTE+SPV RRP N+ GS G P+ TE KIVD ET + LP
Sbjct: 397 NFFEIVGVEILVGYGLTETSPVTHVRRPWRNLRGSSGLPMAGTEAKIVDPETRQTLPPMQ 456
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V +RG QVMQGY+KNP AT +A+D +GW +TGD+G + P + +VL G
Sbjct: 457 RGLVLIRGPQVMQGYYKNPEATAKAIDPEGWFDTGDLGLVTPKND----------IVLTG 506
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
RAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E
Sbjct: 507 RAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPNLE 557
>gi|81299727|ref|YP_399935.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
gi|81168608|gb|ABB56948.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
Length = 649
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/591 (39%), Positives = 352/591 (59%), Gaps = 46/591 (7%)
Query: 55 KLEQEILDFAEGLRVIGVKPE------EKLSLFSDNSCRWLVADQGMLATGAINVVRGSR 108
+L +I FA GL +GV +L+ F+DNS RWL+ADQG L GA N VRG++
Sbjct: 64 ELAIQIQAFAAGLLALGVPTSTADDFPPRLAQFADNSPRWLIADQGTLLAGAANAVRGAQ 123
Query: 109 SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE-- 166
+ ELL++ S S+ L VE+ ++ L S +++F+I+L + ++VE
Sbjct: 124 AEVSELLYVLEDSGSIGLIVEDAALLKKLQPGLAS-LSLQFVIVL-------SDEVVEID 175
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
+ V + +++++GR + D +AT +YTSGTTG PKGVML+
Sbjct: 176 SLRVVGFSDVLEMGRS------------LPAPEPILQLDRLATLIYTSGTTGPPKGVMLS 223
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 286
H NLLHQ+ +L +V + GD LS+LP WH YERAC YF+ S+G +YT +RN+K D+
Sbjct: 224 HGNLLHQVTTLGVVVQPQPGDTVLSILPTWHSYERACEYFLLSQGCTQVYTTLRNVKQDI 283
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
++Y+P +M+SV ++E++Y G+QKQ A +R + +S Y +R ++G L
Sbjct: 284 RQYRPQFMVSVLRLWESIYEGVQKQFREQPAKKRRLIDTFFGLSQRYVLARRRWQGLDLL 343
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
+ P+ +A R++ L PLH L ++LVY K++ A G + +SGGGSL +
Sbjct: 344 ALNQSPAQRLA----EGVRMLA--LAPLHKLGDRLVYGKVREATGGRIRQVISGGGSLAL 397
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
H+D F+E +GV + VGYGLTE+SPV+ RRP N+ GS G PI T I+IVD ET E P
Sbjct: 398 HLDTFFEIVGVDLLVGYGLTETSPVLTGRRPWHNLRGSAGQPIPGTAIRIVDPETKENRP 457
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
+G +G+V +G Q+MQGYF P AT +A+D +GW +TGD+G+I G LV
Sbjct: 458 SGDRGLVLAKGPQIMQGYFNKPEATAKAIDAEGWFDTGDLGYIVGE----------GNLV 507
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
L GRAKDTIVL+ GEN+EP +E+A LRSS I QI+++GQD++ GA+IVP++E + + A
Sbjct: 508 LTGRAKDTIVLTNGENIEPQPIEDACLRSSYISQIMLVGQDRKSLGALIVPNQEAIALWA 567
Query: 586 KRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQIGPIHVVDEPFTVN 635
I D + ++ L E+R + +IGP +++EPF++
Sbjct: 568 SEQGISQTDLQGVVQKLIREELNREVRDRPGYRIDDRIGPFRLIEEPFSME 618
>gi|376004162|ref|ZP_09781920.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
gi|375327496|emb|CCE17673.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
Length = 647
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/607 (38%), Positives = 353/607 (58%), Gaps = 58/607 (9%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKL----SLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
S L +I FA G++ +GV+P E L +LF+D+S RW++ADQG+L GA NVVRG+ +
Sbjct: 47 SDLWTQIQQFAAGVQQLGVEPAEDLPSRVALFADDSPRWMIADQGILTAGAANVVRGATA 106
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE-- 167
+EL +I +S S L V+N +++ E +RF++LL + DI E
Sbjct: 107 DPQELAYILQNSGSTGLVVDNLALLHKL-EKAIQDLPIRFVVLLSDE------DITAEDS 159
Query: 168 --IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
IP+ ++ ++I G + T +D+AT +YTSGTTG PKGVML
Sbjct: 160 LSIPIVNFSQLITKGED-----------MTLLNPPTTKLEDLATLLYTSGTTGKPKGVML 208
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
TH+N LHQ+ ++ D++ + G+ LS+LP WH R+ Y+ SRG ++YT +R K D
Sbjct: 209 THRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYYFLSRGTMVIYTNIRYFKQD 268
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
LQ ++P YM+SVP ++E++Y QKQ A R+ + +S Y +RI + +
Sbjct: 269 LQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFFFGMSNRYIEARRIVQKLTI 328
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ AL A++ +L P+H L +KL+Y+K++ A+G K +SGGGSL
Sbjct: 329 PGQGSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQKVRQAVGGKLKFAISGGGSLA 383
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
MH++ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS G PI TEI+I+D ET +
Sbjct: 384 MHLENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGSAGRPIPETEIRIIDPETRQTC 443
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G KG+V RG QVM GYF+NP AT +A+D +GW +TGD+GW+ P L
Sbjct: 444 EPGYKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTGDLGWLTPQKD----------L 493
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
VL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQDQ+ GA+IVP+ + +
Sbjct: 494 VLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQDQKSLGALIVPNLDALKQW 553
Query: 585 AKRLSI---VHADASELSKEKTI--------SLLYGELR-KWTSKCSF----QIGPIHVV 628
A + V + + E I SL EL + ++ SF +IG ++
Sbjct: 554 ASGQGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELNLQVKNRPSFRPDDRIGQFRLI 613
Query: 629 DEPFTVN 635
EPF+++
Sbjct: 614 LEPFSID 620
>gi|86604864|ref|YP_473627.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553406|gb|ABC98364.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
Length = 626
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/600 (39%), Positives = 346/600 (57%), Gaps = 46/600 (7%)
Query: 43 RRNHRFRVF--CESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
R H VF +L + I A GL+ +G++P +++++F+DNS RWL+AD L TGA
Sbjct: 33 RDPHAQPVFEISYGQLFRRIQILAAGLQALGIRPGDRVAIFADNSPRWLMADLATLFTGA 92
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
+NV R + + EL +I HS S AL ++ + +R+ R ++ G + +
Sbjct: 93 VNVPRSAVADPAELGYILRHSGSTALIAQDAKTLSRV----------RPVVQELGLERLL 142
Query: 161 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
EE V ++ + + GRE R Y+ + +AT +YTSGT+G P
Sbjct: 143 LLSDEEEPGVLNFSQWLQKGRERR------------YEPPRLERSQLATIIYTSGTSGRP 190
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGVML+H NL+HQ+ +L+ +V GDK L++LP WH YERAC YF+ S+ L+YT R
Sbjct: 191 KGVMLSHGNLMHQVENLHVVVQPRPGDKVLTILPTWHSYERACEYFLLSQACTLVYTNPR 250
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+K D Q+ QPHY+++VP ++ET+Y GIQ+Q S + + R L+ S Y RI
Sbjct: 251 FIKQDFQQEQPHYLVAVPRIWETVYEGIQRQFKEKSPLMQRLIRTLMAASEGYVLAGRI- 309
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
N+ Y V+ L AR+ +LWP+H LA+ L+Y+K++ A+G + + +SG
Sbjct: 310 -----AGNRSILHYGVSPWVRLGARLQQGLLWPVHRLADALIYRKVRQALGPNFQQAISG 364
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
GGSLP ++DLFYE +G+ + GYGLTE+SPV+ ARRP NV G+ G P+ TE +IVD E
Sbjct: 365 GGSLPAYLDLFYEVVGISILNGYGLTETSPVLCARRPDNNVRGTAGPPLPGTEFRIVDPE 424
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
T + LP G KG++ RG QVM GY+ NP AT + L DGW TGD+GW+ P
Sbjct: 425 TRQPLPPGEKGLILARGPQVMMGYYNNPEATAKVLSPDGWFETGDLGWLTPD-------- 476
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G LV+ GRAKD IVL GENVEP LE+A L+S I QIV++GQDQ++ A+I P+ +
Sbjct: 477 --GQLVITGRAKDVIVLLNGENVEPQPLEDACLQSPYISQIVIVGQDQKKLAALIYPNLD 534
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGELR-----KWTSKCSFQIGPIHVVDEPFTV 634
+ A I A+A L + +L+ E+R + + QI + EP +V
Sbjct: 535 VLKAWAAEQGIPAAEAELLGHPQVRTLILQEVRARIQERPGYRPHEQIADFRFLPEPLSV 594
>gi|443319050|ref|ZP_21048288.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
gi|442781364|gb|ELR91466.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
Length = 657
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/600 (39%), Positives = 350/600 (58%), Gaps = 55/600 (9%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L I FA GL+ +GVKP ++LF+DNS RWL+ADQG++ G + VR + + +EL
Sbjct: 64 ELGAAIATFATGLQQLGVKPRSAIALFADNSHRWLIADQGIMIAGCYDAVRSAVADGKEL 123
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP--VFS 172
+I HSES L +++ + + R+ + L + ILL + P E+ P + +
Sbjct: 124 RYIAEHSESTTLVLQDLKLWRRL-QPLLVGLPLHLGILL---SDEIPP---EDAPCKMVN 176
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+ +++DLG + + D+AT +YTSGTTG PKGVM+ H+NLLH
Sbjct: 177 FSQLMDLGHQGTLTPVPQT------------AHDLATLIYTSGTTGQPKGVMIRHRNLLH 224
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 292
QI++L ++ GD+ L +LP WH + R YFI+S+G Y+ +R +K D + +PH
Sbjct: 225 QIQTLGAVIQPAIGDRVLGLLPTWHTFGRTAEYFIYSQGCTQTYSNIRTIKADFKTVKPH 284
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
+M+ VP ++E++Y G+QKQ +++ + AL+ S Y +R L P
Sbjct: 285 FMVGVPRLWESIYEGVQKQFREQPESKQRLVNALLWHSQKYVENRRTANSLALDHPNASP 344
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFY 411
+ +RI P HLL EKLVY K++ A G KA +SGGGSL H+DLF+
Sbjct: 345 ------LRQFGSRIFSFAFLPGHLLGEKLVYSKVREATGGCVKALISGGGSLARHLDLFF 398
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
E I V V VGYGLTE+SPV++ARRP N+ G+ G PI TEI++VD ET++ LP G KG+
Sbjct: 399 EIINVPVLVGYGLTETSPVLSARRPWRNLRGASGQPIPGTEIRVVDPETHQPLPLGQKGL 458
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V RG QVM+GY+KNP AT +ALD DGW +TGD+GWI +R +VL GRAK
Sbjct: 459 VMARGPQVMEGYYKNPEATAKALDADGWFDTGDLGWI--------TRDAN--IVLTGRAK 508
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 590
DTIVL+ GEN+EP +E+A +RS I QI+++GQDQR GA++VP+ + + A+ +
Sbjct: 509 DTIVLTNGENIEPQPIEDACIRSPYIDQIMLVGQDQRSLGALVVPNLDALQKWAEPQGLY 568
Query: 591 --VHADASELSKE-KTIS--------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
V D++ + E +TIS L GEL + ++GP +V EPF++
Sbjct: 569 IEVPGDSTSIPPEFQTISLEDDRVQKLFRGELNAQVKDRPGYRPDDRVGPFRLVPEPFSI 628
>gi|359461826|ref|ZP_09250389.1| long-chain-fatty-acid-CoA ligase [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/524 (42%), Positives = 325/524 (62%), Gaps = 34/524 (6%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L +++ FA L+ +GVKP ++++LF+DNS RW +ADQG + GA+NVVR S++S EEL
Sbjct: 55 ELNRQVQRFAASLQALGVKPGDRVALFADNSSRWFIADQGSIMAGAVNVVRSSQASPEEL 114
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++I +S + L VE+ +++ + +K ++ + LL VA + + V ++
Sbjct: 115 VYILENSGATFLLVEDAATLSKL-QPFLTKLPLKLVALL--SDEDVANNGQSQ--VLNFP 169
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I G + +G + +AT +YTSGT+G PKGVML+H NLLH I
Sbjct: 170 QIFQEGTHG------------AVRAVPLGREHLATLIYTSGTSGKPKGVMLSHGNLLHII 217
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++ V E GD+ LS+LP WH + R Y+ S+G +YT++RNLK DLQ Y+PHYM
Sbjct: 218 TAMPAAVQPEVGDRILSILPTWHSFGRLVDYYFLSQGCTQIYTSIRNLKGDLQTYKPHYM 277
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
SVP ++E+LY G+QK+ A R+ + IS Y +R + + N PS
Sbjct: 278 GSVPRLWESLYEGMQKKFRGEPATRQKLINTFFGISQKYILARRTQQRLDI--NNLNPSG 335
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
L + A++ L PLH L +++VY KI+ A+G K SGGGSL MH++ F+E
Sbjct: 336 LQRFL----AQLQMLFLGPLHQLGDRIVYTKIRQAMGGQFKQSFSGGGSLAMHLETFFET 391
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+++ VGYGLTE+SPV+ ARR N+ S G PI TEI+IVD +T + LP G +G+V
Sbjct: 392 VGIELIVGYGLTETSPVLTARRAEHNLRRSAGKPIPKTEIRIVDPQTRQTLPTGQQGLVI 451
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG QVMQGY++NP AT + +D++GW +TGD+GW+ P LVL GRAKDT
Sbjct: 452 VRGPQVMQGYYQNPEATAKVIDQEGWFDTGDLGWLTPTQD----------LVLTGRAKDT 501
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
IVLS GEN+EP LE+A RS+ I QI+V+GQDQR GA+IVP+
Sbjct: 502 IVLSNGENIEPQPLEDACARSAFIDQIMVVGQDQRSLGALIVPN 545
>gi|307154624|ref|YP_003890008.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
gi|306984852|gb|ADN16733.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
Length = 637
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/602 (39%), Positives = 360/602 (59%), Gaps = 50/602 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ S L ++I +FA GL+ +GV PE K++LF+DN RW +ADQG++ +GA N VR S +
Sbjct: 40 IITYSDLYRQIQEFARGLQALGVDPEAKIALFADNCPRWFIADQGIIISGAANAVRSSGA 99
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+ELL+IYN S+S+AL VE+ + ++ L + ++F+ILL +++ + +
Sbjct: 100 ERQELLYIYNDSDSIALVVEDLKTLTKLRPEL-DELTVQFVILLSDEQAPTN----DPLK 154
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ ++ ++++LG S F R +AT +YTSGTTG PKGVML+H N
Sbjct: 155 ILNFKQLLELGANS--PFKPVEQTRA----------SLATLIYTSGTTGKPKGVMLSHGN 202
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LLHQI + + E GD+ LS+LP WH YER Y++ S+G+ +YT +R+ K+DL+R+
Sbjct: 203 LLHQIINFGTVFQPEPGDRVLSILPSWHSYERTVEYYVLSQGVTQIYTNLRSFKNDLKRF 262
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
QPH M+ VP ++E++Y GIQKQ +A ++ + ++ S Y +RI L
Sbjct: 263 QPHLMVGVPRLWESVYEGIQKQFREQNANKQKLVNFFLKQSENYILAQRIANNLSLNHLN 322
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
S + L A++ A+L PLH L ++L+Y+K++ +G + KA +SGGGSL HID
Sbjct: 323 ASAS------ERLQAKLKAALLAPLHALGDRLIYEKVREGVGKNVKAWISGGGSLARHID 376
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE + + V VGYGLTE+SPV R N+ GS G P+ +TEI+IVD ET + LP
Sbjct: 377 TFYEIVNIPVLVGYGLTETSPVTNVRTLERNLRGSCGTPLRYTEIRIVDPETRQELPVEQ 436
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V +RG QVMQGY+K P AT + +D GW ++GD+GW+ P + LV+ G
Sbjct: 437 QGLVLIRGPQVMQGYYKKPEATAKVIDPQGWFDSGDLGWVTPMND----------LVISG 486
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR- 587
RAKDTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ + + AK+
Sbjct: 487 RAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKALGALIVPNLDALQTWAKQQ 546
Query: 588 ----------LSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPF 632
SI AS LS + +LL EL + + QI ++ EPF
Sbjct: 547 QLDLEIPGPEASIEEIHASSLSSKPVQNLLRQELNRLVKDRPGYRADDQIKEFELILEPF 606
Query: 633 TV 634
++
Sbjct: 607 SI 608
>gi|427736347|ref|YP_007055891.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
gi|427371388|gb|AFY55344.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
Length = 663
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/605 (40%), Positives = 359/605 (59%), Gaps = 53/605 (8%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPE---EKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
+F +L +I FA GL+ +GVKPE ++SL +DNS RW +ADQG++ GA++ VR
Sbjct: 63 IFTYRQLFNQIQQFAAGLQALGVKPEAGISRISLIADNSPRWFIADQGIMTAGAVDAVRS 122
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
S++ +EL +I +S+S AL ++ F ++ L ++ +ILL + +P E
Sbjct: 123 SQADVDELAYILANSDSNALVAQDLATFEKLRPRL-DDLPIQLVILL----TEESPPTEE 177
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
I VF++ +++++G A+ + + D +AT +YTSGT+G PKGVML+
Sbjct: 178 VIKVFNFGQLMEIG------------AKHNLEPVKRSRDSLATLLYTSGTSGKPKGVMLS 225
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 286
H NLL+Q+R+L IV E GD LS+LP WHV ER YF+ S+G +YT +R++K+DL
Sbjct: 226 HGNLLYQVRNLRAIVQPEAGDVVLSILPTWHVLERTGEYFLLSQGCTQVYTNLRSIKNDL 285
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
++Y+PHYMI+VP + E++Y G+QKQ +++ + + IS Y +RI + L
Sbjct: 286 KKYKPHYMIAVPRILESVYEGVQKQFREQPTSKQNLINRFLGISGKYIQARRIAQNLDLQ 345
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
+A A I L PLH LA K+VY K++ A G K + GGG+L
Sbjct: 346 NLNPSTGERIA------ASIQEKALSPLHALAGKIVYGKVKEATGGRIKQFICGGGALAK 399
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
HID FYE IG+++ VGYGLTE+SPV ARR N+ GS G + TE+KIVD ET + L
Sbjct: 400 HIDDFYEIIGIEILVGYGLTETSPVTHARRHWSNLRGSSGLGVPGTEVKIVDLETRKELA 459
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
KG+V ++G Q+MQGY+KNP ATK+A+D +GW ++GD+GW+ P +V
Sbjct: 460 PTEKGLVLLKGPQIMQGYYKNPEATKKAIDSEGWFDSGDLGWVTPRLD----------IV 509
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLM 583
L GRAKDTIVL+ GEN+EPL +E+A LRSS I QI+++GQD++ GA IVP+ E E
Sbjct: 510 LTGRAKDTIVLTNGENIEPLPIEDACLRSSFIDQIMLVGQDKKSLGAFIVPNVEALEKWA 569
Query: 584 AAKRLSI-VHADASELSKEKTISL------------LYGELRKWTS-KCSFQIGPIHVVD 629
A+ L + V D S + I+L L E+R + +IGP ++
Sbjct: 570 EAQNLELCVKEDNVTSSTSQKINLESKMIQDLFRQELTREVRNRPGYRPDDRIGPFKLIL 629
Query: 630 EPFTV 634
EPF++
Sbjct: 630 EPFSM 634
>gi|332711790|ref|ZP_08431721.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
gi|332349768|gb|EGJ29377.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
Length = 659
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/596 (39%), Positives = 365/596 (61%), Gaps = 48/596 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPE-------EKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
++L ++I FA GL+ +G +P+ +++LF+DNS RWLVADQG++ GA+NVVR
Sbjct: 66 TQLHEQIEQFAAGLQSLGFQPKLDEKGIPTRIALFADNSPRWLVADQGIMTAGAVNVVRS 125
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
++ +ELL+I S S AL VE+ + ++ + L + +ILL ++ ++
Sbjct: 126 GQAERQELLYILQDSGSTALVVEHLKTLEKLGDRL-DGLPIELVILL-SEEQPLSTGSSR 183
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
+I +Y ++++ G + ++ + +N R + +AT +YTSGTTG PKGVML+
Sbjct: 184 QI--VNYTQLMEAG--ASRSVTKANHNR----------ETLATLLYTSGTTGKPKGVMLS 229
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 286
H NLLHQ+ +L ++ + D+ LS+LP WH YER+ YF+ S+G +YT +R++K DL
Sbjct: 230 HGNLLHQVNTLGTVIEIQKSDRVLSILPTWHAYERSAEYFLLSQGSTQIYTNLRHVKKDL 289
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
+ ++P++M+ VP ++E++Y G+QKQ ++ + + L+ S Y +R+ +G L
Sbjct: 290 KTFKPNFMVGVPRLWESIYEGVQKQFREQPEGKQKLVQNLLGFSQRYIEARRLAQGLTLD 349
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
P I L A + + LWP+H LA KLVY+K++ A G K +SGGGSL
Sbjct: 350 NLNPSP------IQKLLATVQASYLWPVHQLANKLVYQKVREATGGEIKQVISGGGSLAR 403
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
H+D F+E IGV+V VGYGLTE+SPV ARR N+ S G P+ T+I+IVD ET++ LP
Sbjct: 404 HLDNFFEIIGVEVLVGYGLTETSPVTNARRSYRNLRFSAGPPLPETQIRIVDPETHQPLP 463
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G G+V V+G QVMQ Y+ P AT +A+D D W +TGD+GW+ P + LV
Sbjct: 464 QGQTGLVMVKGPQVMQEYYHKPEATAKAIDRDRWFDTGDLGWVTPQND----------LV 513
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLM 583
L GRAKDTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP D +
Sbjct: 514 LTGRAKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKALGALIVPNLDALQGWA 573
Query: 584 AAKRLSI-VHADASELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFT 633
AA+ L++ V A +L+ ++ +L EL R+ ++ + +I ++ EPF+
Sbjct: 574 AAQNLTLDVFAQDVDLNTKEVQTLYRTELNREVQNRPGYRQDDRISTFRLILEPFS 629
>gi|284928783|ref|YP_003421305.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
gi|284809242|gb|ADB94947.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
Length = 638
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/527 (42%), Positives = 325/527 (61%), Gaps = 38/527 (7%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L +++ FA GL+ +G+ +K+ L +DNS RW +ADQG + GA N VR S+S E
Sbjct: 44 SQLYEQLKIFAAGLQSLGIVENDKICLIADNSPRWFIADQGSMLAGASNAVRSSQSDPNE 103
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV--F 171
LLHI S+S L VE+ + ++ + + +R IILL +KS++ EIPV
Sbjct: 104 LLHILQDSDSSILIVEDIKTLEKLY-SFSDQFNLRLIILLSNEKSNL------EIPVKVL 156
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
++ E++ LG+ D R K +T D+AT +YTSGTTG PKG ML+H N+L
Sbjct: 157 NFTELMKLGKNF--------DLRSIVKKDT----DLATLIYTSGTTGKPKGAMLSHGNIL 204
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 291
HQIRSL I+ + GD+ LS+LP WH YER+ YF+ S+G L+YT +RN K+DL++++P
Sbjct: 205 HQIRSLDTIIKPKPGDRILSILPSWHSYERSAEYFLLSQGCTLIYTNIRNFKNDLKKFKP 264
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
H+M+ VP ++E+LY IQKQ S A+ + + S + +RI+ CL+ +
Sbjct: 265 HHMVGVPRLWESLYEVIQKQFREQSVAKEKIIKYCFENSLKFIVCRRIFN--CLSLENLK 322
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
PS+ + A I L+P+H LA+ LVY++I+ +G S K +SGGGSL H+D F
Sbjct: 323 PSFQTRAM----AFIKLIALYPIHKLADLLVYRQIRDNLGGSFKTLISGGGSLAKHLDDF 378
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
YE I + + VGYGLTE+SPV AR N+ G+ G PI TEI IVD T ++L G G
Sbjct: 379 YEIIDIPILVGYGLTETSPVANARTHKHNLRGTAGQPIAGTEINIVDPNTRQILSKGKCG 438
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
++ +RG QVMQGY+K T + D GW ++GD+GW+ P + LV+ GR
Sbjct: 439 LILIRGPQVMQGYYKKIEETNKVKDSQGWFDSGDLGWLTPMND----------LVITGRI 488
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
KDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVP+
Sbjct: 489 KDTIVLSNGENIEPQPIEDACLRSVYIDQIMLVGQDQKMLGALIVPN 535
>gi|86609627|ref|YP_478389.1| long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558169|gb|ABD03126.1| putative long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 628
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/600 (39%), Positives = 349/600 (58%), Gaps = 46/600 (7%)
Query: 43 RRNHRFRVFCES--KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
R H VF S +L + I A GL+ +G+ P +++++F+DNS RWL+AD + TGA
Sbjct: 35 RDPHAQPVFEMSYGELFRRIQTLAAGLQALGICPGDRVAIFADNSPRWLMADLATMFTGA 94
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
+NV R + + EL +I HS S AL IA+ L + +R + G + +
Sbjct: 95 VNVPRSAVADPSELGYILRHSGSTAL----------IAQDLKTLRRIRPDVQELGLERLL 144
Query: 161 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
+E V ++ + + GRE Y+ + +AT +YTSGT+G P
Sbjct: 145 LLSDEQEAGVLNFSQWLQKGRE------------HTYQPPKLERSQLATIIYTSGTSGRP 192
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGVML+H NL+HQ+ +L +V + G+K L++LP WH YERAC YF+ SR L+YT+ R
Sbjct: 193 KGVMLSHGNLMHQVENLGVVVQPQPGNKVLTILPTWHSYERACEYFLLSRACMLVYTSPR 252
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+K D Q+ PH++++VP ++ET+Y GIQ+Q S + + RAL+ +S ++ RI
Sbjct: 253 FIKQDFQQEHPHFLVAVPRIWETVYEGIQRQFKEKSPLMQRLIRALMAVSESHVLSGRI- 311
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
RNQ Y V+ L AR+ +LWPLH LA+ L+Y+K++ A+G + + +SG
Sbjct: 312 -----ARNQSILHYGVSPWVRLQARLQHWLLWPLHRLADALIYRKVRQALGPNFQHAISG 366
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
GGSLP ++DLFYE +G+ + GYGLTE+SPV+ ARRP NV G+ G P+ TE +IVD E
Sbjct: 367 GGSLPAYLDLFYEVVGISILNGYGLTETSPVLCARRPDNNVRGTAGPPLPGTEFRIVDPE 426
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
T + LP KG++ RG QVM GY+ NP AT + L DGW TGD+GW+ P
Sbjct: 427 TRQPLPPREKGLILARGPQVMMGYYNNPEATAKVLSSDGWFETGDLGWLTPD-------- 478
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G LV+ GRAKD IVL GEN+EP LE+A L+S I QIV++GQDQ++ A+I P+ +
Sbjct: 479 --GQLVITGRAKDVIVLLNGENIEPQPLEDACLQSPYISQIVIVGQDQKKLAALIYPNLD 536
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+ A I DA L++ +T +L+ E+R+ + Q+ + EP +V
Sbjct: 537 ALKAWAAEQGIPAEDAELLAQPQTRTLILQEVRRRIQERPGYRPDEQVSDFRFLPEPLSV 596
>gi|428222525|ref|YP_007106695.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
gi|427995865|gb|AFY74560.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
Length = 624
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/523 (41%), Positives = 325/523 (62%), Gaps = 38/523 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L +++ F GLR +G+K E+ ++L +DNS RWL+ADQG+LA GAIN R S++ ELL
Sbjct: 48 LVEQMTRFGAGLRSLGIKSEDHVALIADNSARWLIADQGILAIGAINATRSSQAERRELL 107
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I HS+S AL +EN N++ L ++ IILL + +++ E
Sbjct: 108 YILEHSDSTALVIENLATLNKLQPEL-QDLPIKQIILLSDENPPEG--------AYNFSE 158
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
+I+LG + K + KH +AT +YTSGT GNPKGVML+H NLL+QI
Sbjct: 159 VIELG--ASKDLGNPEITPKH----------LATLIYTSGTGGNPKGVMLSHGNLLYQIN 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMI 295
D+ E K +S+LP WH YER+ Y+IFS+G +YT +R++K DL+ +Q +YM+
Sbjct: 207 GALDVFVVEPSKKVMSILPTWHSYERSFEYYIFSQGCTQIYTNLRSIKKDLKDFQANYMV 266
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP ++E++Y G+QKQ A+++ + ++S AY +RI++G L +
Sbjct: 267 AVPRLWESIYEGVQKQFREQPASKQKLINFFFKVSLAYIKARRIWQGLDLE------NLA 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAI 414
L + L A + L P+HLL ++LVYKK++ A G + VSGGGS+ +H++ FYE +
Sbjct: 321 PTLGEKLIAGLTMLALTPVHLLGDRLVYKKVREATGGCLELVVSGGGSIALHLEDFYEIV 380
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
+ + GYGLTE+SP+ RRP N+ G P+ TE KI+D T + +PA +GIV +
Sbjct: 381 NIPILSGYGLTETSPITHTRRPHRNIRNGDGQPLPKTETKIIDQITRQSVPAYCQGIVTL 440
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG Q+MQGY+KNP+AT +A+D +GW ++GD+G++ P LV+ GRAKDTI
Sbjct: 441 RGPQIMQGYYKNPTATAKAIDPEGWFDSGDLGYVTPWDD----------LVITGRAKDTI 490
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
VLS GEN+EP +E+A LRS I QI+V+GQDQ++ GA+IVP+
Sbjct: 491 VLSNGENIEPQAIEDACLRSPFIDQIIVVGQDQKQLGALIVPN 533
>gi|22298844|ref|NP_682091.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
gi|22295025|dbj|BAC08853.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
Length = 658
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/598 (41%), Positives = 352/598 (58%), Gaps = 49/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L Q I FA GL+ +GV ++++LF DNS RWL+ADQG + GAINVVR + ++E
Sbjct: 64 SELYQRIQRFAAGLQALGVAAGDRVALFPDNSPRWLIADQGSMMAGAINVVRSGTADAQE 123
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL+I S + L +EN ++ E L ++ ++LL G+ +A P+
Sbjct: 124 LLYILRDSGATLLLIENLATLGKLQEPLVD-TGVKTVVLLSGESPELA-----GFPL--- 174
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++ G + F++ + I D++AT +YTSGTTG PKGVM+TH LL Q
Sbjct: 175 -RLLNFG----QVFTEGQYG--TVRAVAITPDNLATLMYTSGTTGQPKGVMVTHGGLLSQ 227
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
I +L+ IV + GD+ LS+LP WH YER YF+F+ G YT +R+ K+DL+R +PHY
Sbjct: 228 IVNLWAIVQPQVGDRVLSILPIWHAYERVAEYFLFACGCSQTYTNLRHFKNDLKRCKPHY 287
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
MI+VP ++E+ Y G+QKQ+ S A +R +A+ + + Y +R+ G LT +
Sbjct: 288 MIAVPRIWESFYEGVQKQLRDSPATKRRLAQFFLSVGQQYILQRRLLTGLSLTNPHPR-- 345
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
WL AR+ +L PL+ L EK +Y KI+ A G K +SGGG+L H+D FYE
Sbjct: 346 ---GWQKWL-ARVQTLLLKPLYELGEKRLYSKIREATGGEIKQVISGGGALAPHLDTFYE 401
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
I ++V VGYGLTE++ V+ ARR N+ GS G PI T IKIVD ET L G KG+V
Sbjct: 402 VINLEVLVGYGLTETAVVLTARRSWANLRGSAGRPIPDTAIKIVDPETKAPLEFGQKGLV 461
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+G QVM+GY+ P AT + LD +GW +TGD+G++ P+ G LVL GR KD
Sbjct: 462 MAKGPQVMRGYYNQPEATAKVLDAEGWFDTGDLGYLTPN----------GDLVLTGRQKD 511
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAK--RL 588
TIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP+ E E + AK RL
Sbjct: 512 TIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQDQKALGALIVPNLEALEAWVVAKGYRL 571
Query: 589 SIVHADASELSKE------KTISLLYGE--LRKWTSKCSF----QIGPIHVVDEPFTV 634
+ + A S E K I LY + LR+ ++ + +I V EPFT+
Sbjct: 572 ELPNRPAQAGSGEVVTLESKVIIDLYRQELLREVQNRPGYRPDDRIATFRFVLEPFTI 629
>gi|16329616|ref|NP_440344.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|1652099|dbj|BAA17024.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/585 (41%), Positives = 340/585 (58%), Gaps = 45/585 (7%)
Query: 30 NCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWL 89
N D VA R +H ++L +EI FA GL+ +GV P + L++F+DNS RW
Sbjct: 83 NFADIVALN---DRHSHPPVTLTYAQLREEITAFAAGLQSLGVTPHQHLAIFADNSPRWF 139
Query: 90 VADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIA---ETLCSKAA 146
+ADQG + GA+N VR +++ +ELL+I S S L EN + +++A ET+
Sbjct: 140 IADQGSMLAGAVNAVRSAQAERQELLYILEDSNSRTLIAENRQTLSKLALDGETI----D 195
Query: 147 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 206
++ IILL VA D IP +++ +++ LG A K +D
Sbjct: 196 LKLIILL--TDEEVAED--SAIPQYNFAQVMALG------------AGKIPTPVPRQEED 239
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 266
+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+ YF
Sbjct: 240 LATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAEYF 299
Query: 267 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 300 LLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLINFF 359
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
IS Y KRI L N S + L+ AR +L PLH L +K+VY K+
Sbjct: 360 FGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYHKV 413
Query: 387 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S G
Sbjct: 414 RQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYSSG 473
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++GD+
Sbjct: 474 RPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDL 533
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++GQ
Sbjct: 534 GWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQ 583
Query: 566 DQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
DQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 584 DQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 628
>gi|302835167|ref|XP_002949145.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
gi|300265447|gb|EFJ49638.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
Length = 643
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/563 (42%), Positives = 341/563 (60%), Gaps = 47/563 (8%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L + FA G +GV +K++LFS+NS RWLVAD ++A GA VVRG+ + +EELL
Sbjct: 34 LYDTMQSFAAGFHELGVAKHDKVALFSENSSRWLVADGAIMACGAAGVVRGASAPAEELL 93
Query: 116 HIYNHSESVALAVENPEFFNRI---------AETLCSKAAMRFIILLWGKKSSVAPDIVE 166
+I HS +V L V++ ++ A+ A+RF++LLWG+ P V
Sbjct: 94 YIAKHSGAVGLVVQDGAALGKLLAAGQAHERAQEPNPLRALRFVVLLWGEAE---PAHVS 150
Query: 167 EI--PVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+ P+ SY++++ G S KA S + + DD+AT VYTSGTTG+PKGVM
Sbjct: 151 SLTCPLLSYNDVLRRGEASLKAGS--------FSPAEVSPDDLATLVYTSGTTGHPKGVM 202
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD 284
LTH NL +Q+R+L + + GD+ LS+LPPWH+YER C YF+ SRG + +YT +R L+D
Sbjct: 203 LTHGNLTYQVRNLSYFLAVQPGDRVLSLLPPWHIYERTCSYFVLSRGGQQVYTNIRRLRD 262
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT----AFKRIY 340
DL + P + + VPLV +TL++ +++++ R +A AL+ AY A +
Sbjct: 263 DLTAFTPDHFVCVPLVLDTLHARVRQRLAAGPRHRAAIATALLAAGAAYHALPPADRGTS 322
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILW-----PLHLLAEKLVYKKIQSAIGISKA 395
+G T A + WA+I+ A + PLH LA KLVY KI+ A+GI K
Sbjct: 323 DGLVAT---------AAGLARRWAQILGAAVLAALLTPLHWLASKLVYGKIREALGIRKT 373
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR---PTCNVLGSVGHPINHTE 452
VSGGGSL H+D FYEA+G+ V G+GLTE+SPV+A RR P N+ GSVG P T+
Sbjct: 374 VVSGGGSLAAHLDDFYEALGLPVLNGWGLTETSPVLACRRSDPPEQNIRGSVGVPTPGTQ 433
Query: 453 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DGWLNTGDIGWIAPH 511
+++VD ET + LP G +G+V G VM GYF + AT +A DGW +TGD+GW+AP
Sbjct: 434 LRVVDPETLDPLPEGRQGLVLANGPGVMAGYFLDEEATARAFRAGDGWFDTGDLGWVAPT 493
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
G RC G LVL GRAKDTIVLS+G+NVEP +E+A S LI+ +V++GQD+R G
Sbjct: 494 GVTG--SRCAGHLVLTGRAKDTIVLSSGKNVEPQPIEDAVAASGLIKHVVLVGQDKRELG 551
Query: 572 AIIVPDKEEVLMAAKRLSIVHAD 594
A++ PD E+ L A S+ A+
Sbjct: 552 ALVWPD-EDALSATPENSLSPAE 573
>gi|186686430|ref|YP_001869626.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
gi|186468882|gb|ACC84683.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
Length = 649
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/593 (39%), Positives = 358/593 (60%), Gaps = 41/593 (6%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V ++L ++I FA GL+ +GVK +++SL SDNS RW +ADQG++ GA++ VR S++
Sbjct: 61 VITYTQLAEQIQLFAAGLQALGVKLGDRISLISDNSPRWFIADQGIMTAGAVDAVRSSQA 120
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
EELL I +S S A+ VE+ + ++ + + ++F ILL S AP +
Sbjct: 121 EKEELLFIIANSGSTAIVVEDLKTLKKLQDRI-QDLPIQFAILL----SDEAPPTDGTLK 175
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
V ++ ++I++G+ N D +AT +YTSGTTG PKGVML++ N
Sbjct: 176 VLNFAQLIEIGKNHNFVPVKQN------------RDALATLIYTSGTTGRPKGVMLSYSN 223
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
L+HQI + ++ GD LS+LP WH YER Y++ S+G +YT +R++K DL+++
Sbjct: 224 LMHQITTFGTVLQPNAGDIVLSILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKGDLRQF 283
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P+YM+ VP ++E++Y G+QKQ A ++ + L+ IS Y +R+ +G L
Sbjct: 284 KPNYMVGVPRLWESIYEGVQKQFREQPAKKQRLINFLLGISDKYIKARRVAQGLDLN--- 340
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ + I+ L A+I A L PLH L E+LVY K++ A G K +SGGG+LP HID
Sbjct: 341 ---NLHASAIERLTAKIQAAALLPLHALGERLVYAKVREATGGHVKQMISGGGALPRHID 397
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+E IGV++ GYGLTE+SPV RRP N++G+ G P+ TE KIVD ET LP
Sbjct: 398 NFFEIIGVQILQGYGLTETSPVTHVRRPWRNLIGASGLPLPATEAKIVDPETKAPLPIEK 457
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V +RG Q+MQGY++NP AT +A+D +GW ++GD+GW+ P LVL G
Sbjct: 458 RGLVLLRGPQIMQGYYQNPEATAKAIDAEGWFDSGDLGWLTPQDD----------LVLTG 507
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
RAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+
Sbjct: 508 RAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSLGALIVPNVEALEKWAQND 567
Query: 589 SIVHADASELSKEKTI--SLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
+ + ++ E + L EL R+ ++ + +IG ++ EPF++
Sbjct: 568 PATSSPSQKIDLESRMIQDLFRQELNREVQNRPGYRPDDRIGTFKLILEPFSI 620
>gi|383321357|ref|YP_005382210.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324527|ref|YP_005385380.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490411|ref|YP_005408087.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435677|ref|YP_005650401.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|339272709|dbj|BAK49196.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|359270676|dbj|BAL28195.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273847|dbj|BAL31365.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277017|dbj|BAL34534.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
Length = 636
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/585 (41%), Positives = 342/585 (58%), Gaps = 45/585 (7%)
Query: 30 NCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWL 89
N D VA R +H ++L +EI FA GL+ +GV P + L++F+DNS RW
Sbjct: 23 NFADIVALN---DRHSHPPVTLTYAQLREEITAFAAGLQSLGVTPHQHLAIFADNSPRWF 79
Query: 90 VADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIA---ETLCSKAA 146
+ADQG + GA+N VR +++ +ELL+I S S L EN + +++A ET+
Sbjct: 80 IADQGSMLAGAVNAVRSAQAERQELLYILEDSNSRTLIAENRQTLSKLALDGETI----D 135
Query: 147 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 206
++ IILL ++ VA D IP +++ +++ LG A K +D
Sbjct: 136 LKLIILLTDEE--VAED--SAIPQYNFAQVMALG------------AGKIPTPVPRQEED 179
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 266
+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+ YF
Sbjct: 180 LATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAEYF 239
Query: 267 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 240 LLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLINFF 299
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
IS Y KRI L N S + L+ AR +L PLH L +K+VY K+
Sbjct: 300 FGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYHKV 353
Query: 387 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S G
Sbjct: 354 RQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYSSG 413
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++GD+
Sbjct: 414 RPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDL 473
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++GQ
Sbjct: 474 GWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQ 523
Query: 566 DQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
DQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 524 DQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 568
>gi|407957499|dbj|BAM50739.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 609
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/572 (41%), Positives = 338/572 (59%), Gaps = 42/572 (7%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
R +H ++L +EI FA GL+ +GV P + L++F+DNS RW +ADQG + GA+N
Sbjct: 6 RHSHPPVTLTYAQLREEITAFAAGLQSLGVTPHQHLAIFADNSPRWFIADQGSMLAGAVN 65
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIA---ETLCSKAAMRFIILLWGKKSS 159
VR +++ +ELL+I S S L EN + +++A ET+ ++ IILL ++
Sbjct: 66 AVRSAQAERQELLYILEDSNSRTLIAENRQTLSKLALDGETI----DLKLIILLTDEE-- 119
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
VA D IP +++ +++ LG A K +D+AT +YTSGTTG
Sbjct: 120 VAED--SAIPQYNFAQVMALG------------AGKIPTPVPRQEEDLATLIYTSGTTGQ 165
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+ YF+ SRG + YT++
Sbjct: 166 PKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAEYFLLSRGCTMNYTSI 225
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
R+ K D++ +PH+++ VP ++E+LY G+QK S ++ + IS Y KRI
Sbjct: 226 RHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLINFFFGISQKYILAKRI 285
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVS 398
L N S + L+ AR +L PLH L +K+VY K+ Q+A G + +S
Sbjct: 286 ANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYHKVRQAAGGRLETLIS 339
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GGG+L H+D FYE + V VGYGLTE++PV AR N+ S G PI TEI+IVD
Sbjct: 340 GGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYSSGRPIPFTEIRIVDM 399
Query: 459 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 518
ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++GD+GW+ P +
Sbjct: 400 ETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDLGWVTPQND----- 454
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP-- 576
L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++GQDQ+ GA+IVP
Sbjct: 455 -----LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPNF 509
Query: 577 DKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
D + K L I + S S+ S LY
Sbjct: 510 DALQKWAETKNLQITVPEPSASSEGMQASGLY 541
>gi|113475497|ref|YP_721558.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
gi|110166545|gb|ABG51085.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
Length = 657
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/594 (40%), Positives = 346/594 (58%), Gaps = 47/594 (7%)
Query: 55 KLEQEILDFAEGLRVIGVKPEE-------KLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+L ++I FA GL+ + V +E +++LF+DNS RW++ADQG++ G +VVR
Sbjct: 68 ELNEQIQKFAAGLQALEVVSKENGTSLPTRVALFADNSPRWMIADQGIITAGGADVVRSG 127
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ EEL++I S S++L +EN R+++ L + IILL S + +
Sbjct: 128 TTDIEELIYILKDSGSISLVLENLALLERLSDRL-QDLPIHLIILL----SEEDANSYKS 182
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+PV + ++I G E ++ N + +AT +YTSGTTG PKGVM+TH
Sbjct: 183 LPVVKFSQVIAKGEERPLQPTNQN------------LETLATLIYTSGTTGKPKGVMVTH 230
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 287
NLL+QI L +V G+ LS+LP WH + R Y S+G +YT R LK DLQ
Sbjct: 231 GNLLYQINFLGTVVQPSPGEFTLSILPTWHSFGRTAEYLFLSQGCTQIYTNKRYLKKDLQ 290
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
++PHY++SVP ++E +Y G+Q+Q+ A ++ +AR + IS Y R+ + L
Sbjct: 291 EHKPHYLMSVPRIWELIYEGVQRQLREQPANKQKLARFFLDISERYIQACRVTQELVLEL 350
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
N PS L L+ A +LWP+H L K+VY+KI+ A G K VSGGGSL MH
Sbjct: 351 NS--PSELEKLM----ATWQSWLLWPIHALGTKIVYQKIRQATGGRLKFAVSGGGSLGMH 404
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
++ F+E IG+ + VGYGLTE+SPV+ R N+ GS G P+ TEIKIV+ ET E L
Sbjct: 405 LENFFEIIGIDLLVGYGLTETSPVLTVRHYWENLRGSSGRPLPGTEIKIVNPETYETLGF 464
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KG+V RG Q+M GY++NP ATK+A+D +GWLNTGDIGWI P + L+L
Sbjct: 465 GEKGLVLARGPQIMVGYYQNPEATKKAIDSEGWLNTGDIGWINPRND----------LIL 514
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GRAKDTIVL+ GEN+EP +E A RS I QI+++GQDQ+ GA+IVP+ E V + A
Sbjct: 515 TGRAKDTIVLTNGENIEPQPIENACTRSQYIDQIMLVGQDQKYLGALIVPNFEAVELWAT 574
Query: 587 RLSIVHADASELSKEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+ + + K + + L+ EL + + +IGP ++ +PFT+
Sbjct: 575 QSQLSESQPKIDWKSQALQELFRQELNQEVKNRPGYRPDDRIGPFRLILDPFTI 628
>gi|451813776|ref|YP_007450228.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|451779745|gb|AGF50714.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/552 (41%), Positives = 329/552 (59%), Gaps = 43/552 (7%)
Query: 30 NCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWL 89
N D VA R +H ++L +EI FA GL+ +GV P + L++F+DNS RW
Sbjct: 83 NFADIVALN---DRHSHPPVTLTYAQLREEITAFAAGLQSLGVTPHQHLAIFADNSPRWF 139
Query: 90 VADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIA---ETLCSKAA 146
+ADQG + GA+N VR +++ +ELL+I S S L EN + +++A ET+
Sbjct: 140 IADQGSMLAGAVNAVRSAQAERQELLYILEDSNSRTLIAENRQTLSKLALDGETI----D 195
Query: 147 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 206
++ IILL VA D IP +++ +++ LG A K +D
Sbjct: 196 LKLIILL--TDEEVAED--SAIPQYNFAQVMALG------------AGKIPTPVPRQEED 239
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 266
+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+ YF
Sbjct: 240 LATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAEYF 299
Query: 267 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 300 LLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLINFF 359
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
IS Y KRI L N S + L+ AR +L PLH L +K+VY K+
Sbjct: 360 FGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYHKV 413
Query: 387 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S G
Sbjct: 414 RQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYSSG 473
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++GD+
Sbjct: 474 RPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDL 533
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++GQ
Sbjct: 534 GWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQ 583
Query: 566 DQRRPGAIIVPD 577
DQ+ GA+IVP+
Sbjct: 584 DQKSLGALIVPN 595
>gi|428299082|ref|YP_007137388.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
gi|428235626|gb|AFZ01416.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
Length = 657
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 353/598 (59%), Gaps = 51/598 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEK------LSLFSDNSCRWLVADQGMLATGAINVVRGS 107
S+L +I FA GL+ +G+K ++LF+DNS RW++ADQG++ GA N VR S
Sbjct: 64 SQLYYQIQQFAAGLQALGIKQHSTESVTPIVALFADNSARWMIADQGIMMAGAANAVRSS 123
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD---I 164
+ EELL+I HS S+ L +EN + N+IA + ++ +++++LL S P+ I
Sbjct: 124 AAEREELLYILEHSGSLGLVIENLKTLNKIAPEVY-QSQIQWVVLL----SDEQPENNSI 178
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+ + ++++++ + +S ++ + +AT +YTSGTTG PKGVM
Sbjct: 179 NSSLIIINFEQLMQIASQSSLQPTE------------LAYQKLATLIYTSGTTGKPKGVM 226
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD 284
LTH N LHQI +L I+ GDK LS+LP WH + R Y+ +G+ +Y+ R LK
Sbjct: 227 LTHGNFLHQISTLTAIIQPSVGDKTLSILPTWHSFGRVGEYYTLGQGVTQIYSNRRYLKQ 286
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
DLQ Y P Y+I VP ++E++Y GIQK + + + ++ + +S Y R ++
Sbjct: 287 DLQDYTPQYVIGVPRLWESIYEGIQKSFRDKTPRMQKLIKSFLAVSKKYIKAVRTWKKID 346
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
L S ++ A I +L PLH L E +VYKKIQ A G K + GGGSL
Sbjct: 347 LQNLNPTTSQIIN------AWITTILLAPLHFLGEMIVYKKIQLATGGKVKQLICGGGSL 400
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
H++ F+E +G+++ VGYGLTE+SPV++ARR N+ G+ G P+ TE+KIVD ET++
Sbjct: 401 AQHLEDFFEIVGIQILVGYGLTETSPVLSARRYYKNLRGASGLPLASTELKIVDLETHQP 460
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
LP G +G+V +G Q+MQGY+ NP AT +A+D +GW +TGDIGW+ P +
Sbjct: 461 LPQGKRGLVMAKGPQIMQGYYLNPEATSKAIDSEGWFDTGDIGWLTPDNQ---------- 510
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EV 581
+VL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQ+ GA+IVPD E E
Sbjct: 511 IVLTGRAKDTIVLTNGENIEPQPIEDACLRSDYIDQIMLVGQDQKSLGALIVPDLEILES 570
Query: 582 LMAAKRLSIVHADASELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
+ +K IV+ + L+ + L+ EL R+ + + +I ++ EPFT+
Sbjct: 571 WLLSKNQPIVNGEIG-LNNQMIRDLIREELNREVRDRKGYRRDDEIIVFEIIPEPFTI 627
>gi|428210574|ref|YP_007083718.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
gi|427998955|gb|AFY79798.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
Length = 668
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/614 (39%), Positives = 358/614 (58%), Gaps = 63/614 (10%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKP-----EEKLSLFSDNSCRWLVADQGMLATGAIN 102
F CE +I FA G++ +G+ +++LFS++S RW++ADQG+L GA +
Sbjct: 62 FGQLCE-----QIQQFAAGVQSLGLPAIADNLPPRVALFSNDSPRWMIADQGLLTAGAAD 116
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
VVRGS + EELL I +S S+ L VEN ++ L +++II L +
Sbjct: 117 VVRGSDADREELLFILQNSGSMGLVVENLALLKKLRPQL-DDLPIQWIIYL--SDEPLPT 173
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D + V S+ +++ G A ++ + + +AT +YTSGTTG PKG
Sbjct: 174 DDTLPVQVLSFQQVMAKG------------ASATFQPVPLTRETLATLIYTSGTTGKPKG 221
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL 282
VMLTH NLLHQI +L ++ GD+ +++LP WH + R YF+ SRG YT +R L
Sbjct: 222 VMLTHGNLLHQIENLPTLMQPTPGDRIITILPTWHSFGRMGQYFLLSRGCSQFYTNIRYL 281
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
K DL+ Y P Y VP ++E++Y G+QKQ A R+ + + S +Y RI +G
Sbjct: 282 KADLKEYHPKYTFGVPRLWESIYEGVQKQFREQPANRQKLVKTFFGFSQSYIEAGRILQG 341
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 401
L Q +P+ + + L A I A+LWPLH L ++LVY K++ A G + +SGGG
Sbjct: 342 LQL---QLEPA---SGSEKLLAGIKRALLWPLHTLGDRLVYNKVRQATGGQLQYVISGGG 395
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
SL MHI+ F+E IG+ V VGYGLTE+SPV+ ARR N+ GS G PI +TE++IV ET
Sbjct: 396 SLAMHIENFFEIIGIDVLVGYGLTETSPVLTARRFWKNLRGSAGRPIPYTELRIVHPETR 455
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
+ L G +G+V RG Q+MQGY++NP AT +A+D +GW +TGD+GW+ P G
Sbjct: 456 KPLQTGERGLVLARGPQIMQGYYQNPEATTKAIDPEGWFDTGDLGWLTP----------G 505
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
LVL GRAKDTIVL+ GEN+EP +E+A +RS+ I Q++++GQDQ+ GA+IVP+ E +
Sbjct: 506 NDLVLTGRAKDTIVLTNGENIEPQPIEDACIRSAYIDQMMLVGQDQKCLGALIVPNFEAL 565
Query: 582 LM--AAKRLSIVHAD---------AS-----ELSKEKTISLLYGEL-RKWTSKCSF---- 620
+++ LS+ + AS +LS + +L EL R+ ++ +
Sbjct: 566 QQWASSQNLSLRLPENVSQGNPPPASGTREIDLSSPEVDNLFRQELNREVKNRPGYRPDD 625
Query: 621 QIGPIHVVDEPFTV 634
+IGP ++ EPFT+
Sbjct: 626 RIGPFSLLSEPFTM 639
>gi|443312969|ref|ZP_21042583.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
gi|442777119|gb|ELR87398.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
Length = 629
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 349/587 (59%), Gaps = 41/587 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L Q+I FA GL+ +G+K +++SLF++N RWLVADQG++ GAIN VRG+++ EE
Sbjct: 49 SQLYQQIGQFAAGLQALGIKHGDRISLFAENQPRWLVADQGIMTAGAINAVRGAQADREE 108
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LL+I +HS+S+AL V++ ++ K + I+L S P + +Y
Sbjct: 109 LLYILSHSDSMALVVQDNATLQKLLTE--GKLPVNLAIIL----SDEQPPEIANTKTLNY 162
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ LG +N + + +D+AT +YTSGT+G PKGVML+ NLL Q
Sbjct: 163 SGVTSLG---------ANHTLQPVQRR---KEDLATLMYTSGTSGQPKGVMLSQGNLLSQ 210
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ +V + G+ +S+LP WH YER+ YFI + G +YT +R +K D + ++P Y
Sbjct: 211 VFGASAVVEPQPGEVVMSILPIWHCYERSFEYFILAHGCTQIYTNIRYVKKDFKEFKPFY 270
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M+ VP ++E++Y G+QKQ SA ++ + S Y +R+ +G L N PS
Sbjct: 271 MVGVPRLWESIYEGVQKQFREQSANKQKLINFFFAQSQRYIMARRVVQGLDL--NNLYPS 328
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
L L WARI L +H LA+K++YK+++ A G K VSGGGS+ H++ FYE
Sbjct: 329 SLAKL----WARIQIIPLGLIHQLADKIIYKQVREATGGKVKFLVSGGGSIAEHLEDFYE 384
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+GV + GYGLTE+SP+ RR N+ G+ G P+ TE +IV+ E+++ LP G KG+V
Sbjct: 385 IVGVDILGGYGLTETSPITHVRRTWRNLRGADGQPLPDTETQIVELESHKPLPVGKKGLV 444
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+RGSQVMQGY+KNP AT +A++ +GW NTGD+GW++ + LV+ GRAKD
Sbjct: 445 MIRGSQVMQGYYKNPEATAKAINSEGWFNTGDLGWVSKQND----------LVITGRAKD 494
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVLS GEN+EP +E A LRS I QI+++GQD+R GA+IVP+++ + A +
Sbjct: 495 TIVLSNGENIEPQPIENACLRSPYIDQIMLVGQDERSLGALIVPNQDALQQWATTQNPA- 553
Query: 593 ADASELSKEKTISLLYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 634
D S L + + L E+ R+ ++ + +I ++ EPF++
Sbjct: 554 IDPSNLGNKAILDLYRLEVSREVQNRPGYRPDERISTFKLIAEPFSI 600
>gi|449019989|dbj|BAM83391.1| long-chain-fatty-acid CoA ligase [Cyanidioschyzon merolae strain
10D]
Length = 824
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 342/554 (61%), Gaps = 44/554 (7%)
Query: 54 SKLEQEILDFAEGLR---VIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
+++ +EI + A GLR + ++P + ++LFS+NS RWL+ DQ ++ GA + VRG+ +
Sbjct: 170 AEVHEEIRELAAGLRHHGLTNLQPGDIVALFSENSARWLITDQALMWNGAASAVRGTAAP 229
Query: 111 SEELLHIYNHSESVALAVENPEFFNRI----AETLCSKAAMRFIILLWGKKSSVAPDI-- 164
+EL +I HS++ L V+ P ++ T C +RFI++LW +K ++A I
Sbjct: 230 LDELAYILEHSDACGLVVDTPTVLEKLIRNEQATRCLAKQVRFIMVLWNRKGAIAEPIRS 289
Query: 165 -VEEIPVFSYDEIIDLGRE------SRKAFSDSNDARKHYKYETIGSDD-IATYVYTSGT 216
V +P+++Y+E+ + GR +R + S ++ + + I + +AT VYTSGT
Sbjct: 290 AVGSVPIYTYEEVTETGRAKVRDALNRTSRSPADAEMERALWRPIAEREMLATLVYTSGT 349
Query: 217 TGNPKGVMLTHKNLLHQI------RSLYDIVPAEN---GDKFLSMLPPWHVYERACGYFI 267
TG PKG MLTH+NLLHQI R+ ++P+++ GD +++LP WH++ER +
Sbjct: 350 TGQPKGAMLTHRNLLHQIMANSFSRAWRPLLPSQDASAGDVMVNILPCWHIFERIGELYA 409
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
SRG+ ++Y+ + + K+DL R++PH ++ VP +YE++Y GI+ Q+ RR + L+
Sbjct: 410 LSRGVSMVYSKLLHFKEDLARHRPHLLVGVPRLYESIYQGIKSQLMKQGRFRRALIFGLL 469
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
IS + ++RI +G R+ V+ ++ ++A + +LWPLH+LA + +++++
Sbjct: 470 GISTRFVQWRRIRDGALFDRH-------VSTLERIYAGLWTLLLWPLHMLANLIAWRQLR 522
Query: 388 SAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
G + VSGGGSL M +D F+EAIGV + VGYGLTE+SPV+A R N+ G+ G
Sbjct: 523 RMALGGRVRTLVSGGGSLAMFLDDFFEAIGVLLIVGYGLTETSPVLANRLREHNIRGTTG 582
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
+ T++KIVD ET + LP G GI+ RG Q+ QGY+K+P+AT + +D +G+ +TGD+
Sbjct: 583 LVVPGTQVKIVDPETRQTLPPGQTGIICARGEQIFQGYYKDPAATARVIDSEGYFDTGDL 642
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G+ + + G LV+ GR KD IVL+ GEN+EP +E+A L S I Q++++GQ
Sbjct: 643 GFFSQYT---------GDLVIAGRLKDVIVLNNGENIEPTPIEDAMLGSDYIDQVMLVGQ 693
Query: 566 DQRRPGAIIVPDKE 579
DQR GA+IVP+ E
Sbjct: 694 DQRALGALIVPNLE 707
>gi|443475739|ref|ZP_21065678.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
gi|443019402|gb|ELS33497.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
Length = 625
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/599 (38%), Positives = 344/599 (57%), Gaps = 71/599 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
++I F GLR +GV +K++L +DNS RWL+ADQG+LA GA N R S++ ELL+I
Sbjct: 48 EQINAFGAGLRALGVNFGDKVALIADNSPRWLIADQGILAIGAANATRSSQAERSELLYI 107
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP---VFSYD 174
HS+SVA+ VEN ++ L + +R IILL +E P +++
Sbjct: 108 IEHSDSVAIVVENLATLKKLEPELHT-LPVRQIILL-----------SDETPPEGAYNFQ 155
Query: 175 EII------DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
+II DLG I D +AT +YTSGTT PKGVMLTH
Sbjct: 156 QIITKGLGLDLGNPP------------------IQRDTLATLIYTSGTTARPKGVMLTHG 197
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 288
N L +I ++ + +K LS+LP WH YER YFIFS+G +YT +R +K DL+
Sbjct: 198 NFLFEIEGAQAVLKLKVSEKVLSILPTWHSYERTFEYFIFSQGCTQIYTNLRTIKKDLRE 257
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
++P YM++VP ++E++Y G+QKQ +++ + ++ S Y KR+ +G +
Sbjct: 258 HKPDYMVAVPRLWESIYEGVQKQFREQPNSKQRLVDFFLKASQKYITAKRVIQGLNVA-- 315
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
PS L D L A +I LW +H L KLVY+K++ A G + K VSGGGS+ H+
Sbjct: 316 NLSPS----LGDKLKASVIVLSLWAVHKLGHKLVYQKVREATGGNFKYIVSGGGSIAEHL 371
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ FYE +G+++ GYGLTE+SP+ RRP N+ G G P+ TE +IVD + LP G
Sbjct: 372 EDFYEIVGIEILGGYGLTETSPITHVRRPNRNIRGGDGQPLIKTETRIVDISSRADLPVG 431
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
+G+V +RG QVMQGY+KNP AT +A+D GW +TGD+G+++P + L++
Sbjct: 432 QQGLVLIRGPQVMQGYYKNPEATAKAIDPQGWFDTGDLGYVSPWND----------LIIT 481
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAKDTIVLS GEN+EP +E+A +RS+ I Q+V++GQDQ++ G +IVP+ L A +
Sbjct: 482 GRAKDTIVLSNGENIEPQPIEDACIRSNYIDQVVLVGQDQKQLGLLIVPN----LSALEA 537
Query: 588 LSIVHADAS------ELSKEKTISLLYGELRKWTSK-----CSFQIGPIHVVDEPFTVN 635
++ D++ L+ K SL E+ + + +IG + EPFT++
Sbjct: 538 AGLIAPDSNLADILPALNDPKIRSLYREEINREVQNRPGYSVNDRIGVFEFLPEPFTID 596
>gi|317969072|ref|ZP_07970462.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0205]
Length = 638
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 319/545 (58%), Gaps = 35/545 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L Q+I A G +GV+P E + LFS+N RWLVADQG++ GA + VRGS + +EL
Sbjct: 63 LHQQIEQAAAGFAALGVRPGEVVGLFSENCPRWLVADQGLMRLGAADAVRGSAAPVDELR 122
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I +VAL +E+ E R+ + +RF++LL G + SV P +P F++DE
Sbjct: 123 YIAGDCGAVALVLESAELLQRLKLSSELLGQLRFVVLLQGDRGSVVP----VVPCFTWDE 178
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
++ G S + G + +AT +YTSGTTG PKGV L+H NLL Q+R
Sbjct: 179 LMAKGASSPTP-----------AWPEGGEERLATVLYTSGTTGRPKGVPLSHANLLQQLR 227
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMI 295
SL V GD+ LS+LP WH YER+ YF+ S G + YT +++L+ DLQR +PHY+I
Sbjct: 228 SLGVAVAPRPGDRVLSVLPIWHAYERSAEYFLLSCGCQQTYTTLKHLRPDLQRVRPHYLI 287
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
SVP ++E L SG + + A+R + R+ +++S + +R+ L +K+
Sbjct: 288 SVPRLWEALLSGFEDALSAMPASRAKLLRSALKVSRFHCLSRRVAADRTLIPERKRRRLA 347
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEA 413
A + WPLH +AE+L + K+++ + G + +SGGG+L +H+D F+EA
Sbjct: 348 AA--------AGALLSWPLHGVAEQLFWPKVRAQLIGGRLRTAISGGGALAIHVDGFFEA 399
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+++ VGYGLTE+SPV+ RR N GS G P+ T IKI D E+ VL G +G V
Sbjct: 400 IGIELLVGYGLTETSPVLTCRRRWNNRRGSSGQPLAGTSIKITDPESGAVLAIGERGKVL 459
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+G+QVM GY P AT + LD +GW +TGD+G + G LVL GRAKDT
Sbjct: 460 AKGAQVMGGYLGKPEATAKVLDAEGWFDTGDLGHLL----------ADGTLVLTGRAKDT 509
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVLS+GEN+EP LEE + SL+ Q++++GQD++ GA++VP E + A + A
Sbjct: 510 IVLSSGENIEPGPLEECLVACSLVEQVMLVGQDRKALGALVVPKLENLEAFAAEQGMSAA 569
Query: 594 DASEL 598
D + L
Sbjct: 570 DPALL 574
>gi|414873918|tpg|DAA52475.1| TPA: hypothetical protein ZEAMMB73_557217 [Zea mays]
Length = 603
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 222/267 (83%), Gaps = 13/267 (4%)
Query: 381 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 440
LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIG+KVQ GYGLTE+SPV+AARRP CNV
Sbjct: 310 LVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGIKVQNGYGLTETSPVVAARRPFCNV 369
Query: 441 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 500
LG+VGHPI HTEIKI D ET EVLP GSKGIVK++G QVM+GY+KNPSAT +A D++GW
Sbjct: 370 LGTVGHPIKHTEIKIFDIETGEVLPDGSKGIVKIKGPQVMKGYYKNPSATNEAFDQEGWF 429
Query: 501 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 560
+TGD+GWI PHH+ G SR+CGG++VLEGRAKDTIVLSTGENVEP E+EEAA RS+LI QI
Sbjct: 430 STGDVGWIVPHHAMGPSRQCGGMIVLEGRAKDTIVLSTGENVEPAEIEEAASRSTLINQI 489
Query: 561 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW------ 614
VVIGQDQRR GAIIVP+ +EVL AKR SI+ D EL+K+K +++LY ELR W
Sbjct: 490 VVIGQDQRRLGAIIVPNNDEVLAEAKRKSILGEDG-ELAKDKVMNMLYDELRTWRKCLII 548
Query: 615 ------TSKCSFQIGPIHVVDEPFTVN 635
T+ CSF++GPI VVDEPFT++
Sbjct: 549 LFTRFRTAHCSFRVGPILVVDEPFTID 575
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/230 (61%), Positives = 182/230 (79%), Gaps = 7/230 (3%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++LEQEILDF++GLR IGV P+EKL+LF+DNSCRWLVADQG++ATGAINVVRG+RSS EE
Sbjct: 86 TQLEQEILDFSQGLRAIGVAPDEKLALFADNSCRWLVADQGIMATGAINVVRGTRSSDEE 145
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L IY HSES P+FFNR+AE+ S+ RFI+LLWG KS + +++IP++ Y
Sbjct: 146 LFQIYTHSES-------PQFFNRLAESFMSRINTRFIVLLWGDKSCIDSQAIKDIPLYGY 198
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+II+LGRESR A S++ + +E+I +D+AT +YTSGT+G PKGVMLTH+NLLHQ
Sbjct: 199 KDIIELGRESRNALFLSDEQGQQDVFESISPEDVATLIYTSGTSGTPKGVMLTHRNLLHQ 258
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 283
I +L++IVPAE GD+FLSMLP WH YERAC YFIFS GI+ +YT V+ LK
Sbjct: 259 INNLWEIVPAEPGDRFLSMLPTWHAYERACEYFIFSYGIQQVYTTVKYLK 308
>gi|318042187|ref|ZP_07974143.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0101]
Length = 644
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/532 (40%), Positives = 316/532 (59%), Gaps = 39/532 (7%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S L I A G +GVKP + ++LFS+NS RWLVADQG++ GA + VRGS + EE
Sbjct: 61 SDLNARIEQAAAGFAALGVKPGDVVALFSENSPRWLVADQGLMRLGAADAVRGSGAPVEE 120
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I S +VAL +E+ E R+ + +RF++LL G + SV P +P F++
Sbjct: 121 LRYIAADSGAVALVLESAELLTRLKLSSELLGQLRFVVLLQGDRGSVVP----VLPCFTW 176
Query: 174 DEIIDLG-RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+E++ G + A+ + + R +AT +YTSGTTG PKGV L+H NLLH
Sbjct: 177 EELMAQGAKAPAPAWPEGGEQR------------LATVLYTSGTTGQPKGVPLSHANLLH 224
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 292
Q+R L V + GD+ LS+LP WH YER+ YF+ + G YT ++ L+ DLQR +PH
Sbjct: 225 QLRHLGVAVAPQPGDRVLSVLPIWHAYERSAEYFLLACGCAQTYTNLKQLRPDLQRVRPH 284
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
Y+ISVP ++E L G + + +AR+ + R+ + +S + +R+ L
Sbjct: 285 YLISVPRLWEALLGGFEDALAAMPSARQKLLRSALGLSRYHCLSRRVAADRTLAPEPAGR 344
Query: 353 SYLVALIDWLWARIICAIL-WPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDL 409
L A A+L WPLH LA ++++ K++ + G + +SGGG+L +H+D
Sbjct: 345 RLLAA---------GGALLSWPLHGLASRVLWPKVRQQLIGGRLRTAISGGGALAIHVDG 395
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+EA+G+++ VGYGLTE+SPV+ RR N GS G P+ T I+IVD E+ +L G +
Sbjct: 396 FFEAVGIELLVGYGLTETSPVLTCRRRWNNRRGSSGQPLPGTAIRIVDPESGALLQIGQR 455
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G V +G QVMQGY P AT + LD++GW +TGD+G + G LVL GR
Sbjct: 456 GRVLAQGPQVMQGYLGKPEATAKVLDQEGWFDTGDLGQLL----------ADGTLVLTGR 505
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
AKDTIVLS+GEN+EP LEE + +L+ Q++V+GQD++ GA++VP E +
Sbjct: 506 AKDTIVLSSGENIEPGPLEECLVACTLVEQVMVVGQDRKALGALVVPKLEAL 557
>gi|352096361|ref|ZP_08957241.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
gi|351677055|gb|EHA60206.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
Length = 648
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 337/572 (58%), Gaps = 40/572 (6%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F ++L Q I A G R +G++ + + LF++NS RWL+ADQG++ GA + VRG+ +
Sbjct: 59 FTYAELSQRIATAAAGFRSLGIREGDVVGLFAENSPRWLMADQGLMRAGAADAVRGASAP 118
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I +++VAL V+N + + R+ ++ +RF++ L G +V PD++
Sbjct: 119 VEELRYILEDAKAVALVVQNADLWQRLQLPDQLRSQLRFVLQLEG--DAVDPDVI----- 171
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
++ +++ G + D+ + + AT +YTSGTTG PKGV LTH NL
Sbjct: 172 -TWADLLAAGAGQQAPDPDAG------RDAASAASTTATILYTSGTTGQPKGVPLTHANL 224
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ+RSL + E G LS+LP WH YER+ Y+ FS YT ++ LK DL R +
Sbjct: 225 LHQMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVK 284
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M++VP ++E + +G + + T A+R+ + RA + S AY CL R Q+
Sbjct: 285 PVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALANSSAY----------CLARRQR 334
Query: 351 QPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMH 406
+ L+ L + AR+ A WP H LA KL++ K+ Q + G + ++GGG++ H
Sbjct: 335 RNLMLMPLGRRQRMMARLKSAGRWPAHALASKLIWPKLRLQLSGGQLRFPINGGGAIAPH 394
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVDAET + L
Sbjct: 395 VDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQPLPDTEFRIVDAETRQPLGF 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G+V VRG QVM GY + P AT + LD DGW +TGD+G + P G +VL
Sbjct: 455 RECGVVLVRGPQVMAGYLRRPEATAKVLDADGWFDTGDLGMLLPD----------GSVVL 504
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM-AA 585
GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQDQR+ A++VP E +L A
Sbjct: 505 TGRAKDTIVLSSGENIEPAPLEEELVSSPLIEQVMLVGQDQRQLAALVVPRLEAMLAWGA 564
Query: 586 KRLSIVHADASELSKEKTI-SLLYGELRKWTS 616
++ + AD ++ + LL GEL + S
Sbjct: 565 EQGLRLPADLGGTPGDQDLRRLLRGELNRLLS 596
>gi|254421740|ref|ZP_05035458.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
gi|196189229|gb|EDX84193.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
Length = 640
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 343/593 (57%), Gaps = 44/593 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
+ +L I FA GL+ +GV P E ++LFS+N RW+VADQG++ GAI+ VRG+ S
Sbjct: 53 YTYGELATSISQFAAGLQRLGVVPGEAIALFSENRPRWMVADQGIMTAGAIDAVRGANSD 112
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
ELL I N+S+S+ L +++ ++IA L + +RFIILL + ++ D+ +
Sbjct: 113 KAELLFILNNSDSIGLVIQDLSVLDKIAGDL-GELGLRFIILLTDEVAASETDL-GGAKL 170
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
++ E++ LG E A K E D AT +YTSGT+G PKGVMLT NL
Sbjct: 171 LNFSELMALGAE--------QGAPTPVKLE---RDRTATLMYTSGTSGMPKGVMLTQSNL 219
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
L QI +V K LS+LP WH YER+ YF+ S+G +YT +R +K D + +
Sbjct: 220 LSQIAGASSVVNVGPEQKVLSILPIWHCYERSFEYFVLSQGCTQIYTNIRTVKRDFKEHS 279
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P YM++VP ++E++Y G+Q+Q + ++ + R + Y +R G L
Sbjct: 280 PQYMVAVPRLWESIYDGVQRQFQSQPEGKQKLIRFFLEKGHEYITARRTLSGLRLDHLTS 339
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHID 408
+ L A + A LWP++ + +++V+ KI+ A+G K VSGGGS+ +++
Sbjct: 340 STG------EKLAAALKLAYLWPIYQIGDRIVFSKIREAMG-GKVDFLVSGGGSIADYLE 392
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FYE +G+ + GYGLTE+SP+ RRP N+ G+ G + TE IVD ET + +P G
Sbjct: 393 DFYEVVGIPILGGYGLTETSPITHVRRPWRNLRGADGQALPGTETAIVDPETRQPIPIGK 452
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+V +RG QVM+GY+KN AT +A+D +GW +TGD+G + G L++ G
Sbjct: 453 PGLVLLRGPQVMKGYYKNAEATAKAIDSEGWFDTGDLGRLTDW----------GDLIITG 502
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAK 586
RAKDTIVL+ GEN+EP +E A LRS + QI+++GQDQ+ GA+IVP+KE E A+K
Sbjct: 503 RAKDTIVLTNGENIEPTPVENACLRSPYVDQIMLVGQDQKSVGALIVPNKEVLEKWAASK 562
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
+S+ +L+ + L EL++ S + ++GP +++EPFT+
Sbjct: 563 GVSM-----EDLNSKPIQDLYKQELKREISARPGYRPDERVGPFVLLEEPFTI 610
>gi|427702586|ref|YP_007045808.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
gi|427345754|gb|AFY28467.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
Length = 653
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/577 (38%), Positives = 330/577 (57%), Gaps = 46/577 (7%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+GV P + ++LF++N RWLVADQG++ GA + VRGS + +EEL +I + +V +E
Sbjct: 78 LGVGPGDVVALFAENGPRWLVADQGLMRAGAADAVRGSVAPAEELRYILEDAGAVGAVLE 137
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSD 189
+ R+A + +RFI+LL G+ AP + +P ++D+++ G S
Sbjct: 138 SAALLERLALDGPALQRLRFIVLLEGE----APAVPLPLPCLTWDDLLQRGAASPLPPLP 193
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 249
+ + +AT +YTSGTTG PKGV L+H NLLHQ+R+L V GD
Sbjct: 194 TGGPGR-----------LATLLYTSGTTGQPKGVPLSHANLLHQLRTLGVAVSPSPGDHV 242
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LS+LP WH YER YF+ S G YT ++ L+ DLQ+ +P Y+ISVP ++E L SG +
Sbjct: 243 LSVLPIWHAYERTAEYFLLSCGCRQTYTTLKQLRSDLQKVRPQYLISVPRLWEALLSGFE 302
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
+ +R+ + R + +S A+ +R L +P V D L A
Sbjct: 303 DALAAMPPSRQRLLRRALAVSRAFHRRRRTALDLTL-----KP---VGAADRLVAAAGAL 354
Query: 370 ILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+LWPLH A L++ K+++ + G + +SGGG+L +H+D F+EA+G+++ VGYGLTE+
Sbjct: 355 LLWPLHGAAGALLWPKVRAQLVGGRLRTAISGGGALAIHVDGFFEAVGIELLVGYGLTET 414
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
SPV+A RRP N GS G P+ T +K+VD T LP G +G+V RG QVM GY P
Sbjct: 415 SPVLACRRPWSNRRGSAGQPLPDTALKVVDPATRTPLPVGERGLVLARGPQVMGGYHNKP 474
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
AT + LD +GW +TGD+G + G LVL GRAKDTIVLS+GEN+EP L
Sbjct: 475 EATAKVLDGEGWFDTGDLGLLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPL 524
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKEKTISL 606
EEA + S L+ Q++++GQD+++ GA++VP K EVL A A + D + +L
Sbjct: 525 EEALVASPLVEQVMLVGQDRKQLGALVVP-KAEVLQAFAATAQLPCPDPGDPGAGADPAL 583
Query: 607 LYGELRKWT--------SKCSFQIGPIHVVDEPFTVN 635
L R+ ++ ++G + +V EPF+++
Sbjct: 584 LRALCRECNRLLAARPGTRADERLGGVALV-EPFSID 619
>gi|254431287|ref|ZP_05044990.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
gi|197625740|gb|EDY38299.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
Length = 663
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 317/530 (59%), Gaps = 28/530 (5%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L Q I A GL +GV P ++LF++NS RWL DQG++ GA + VRGS + EEL
Sbjct: 74 QLHQAIEQSAAGLAALGVGPGSVVALFAENSPRWLQVDQGVMRCGAADAVRGSAAPVEEL 133
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK-KSSVAPDIVEEIPVFSY 173
+I + S ++ L VE R+ ++A+ F+++L G S+ A + E + + +
Sbjct: 134 RYILDDSGAMGLVVETVALLKRLQLDGAQRSALAFVLVLEGDLPSAAALEGAEGLVLLDW 193
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ +++ + A + +AT +YTSGTTG PKGV LTH NLLHQ
Sbjct: 194 EALME-------RGRAALAAGRAAPQPPADPGQLATILYTSGTTGQPKGVPLTHANLLHQ 246
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+R L V GD+ +S+LP WH YER+ YF+ + G YT +++L+ DLQR +PHY
Sbjct: 247 LRHLGVAVTPHPGDRVVSVLPIWHSYERSAEYFLLACGCHQSYTTLKHLRPDLQRVRPHY 306
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ISVP ++E + SG + + +R+ + RA + S A +R L R++ P+
Sbjct: 307 LISVPRLWEAILSGFEDALRAMPTSRQRLLRAALANSRAQALARRRARDLTL-RHEPLPT 365
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFY 411
+ A ++ L + WPLH LAE +++ K++S + G + +SGGG+L +H+D F+
Sbjct: 366 RVCAAVEAL-------LRWPLHRLAEAVLWPKVRSQLVGGRLRTAISGGGALALHVDAFF 418
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
EAIG+++ VGYGLTE+SPV+ RRP N GS G P+ T I+I D ET++ + G +G+
Sbjct: 419 EAIGIELLVGYGLTETSPVLTCRRPWANRRGSAGQPLPGTAIRIADPETHQPVAVGRRGL 478
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V RG QVM GY++ P A+ + LD +GW +TGD+G + P G LVL GRAK
Sbjct: 479 VLARGPQVMGGYWRKPEASAKVLDGEGWFDTGDLGHLLPD----------GSLVLTGRAK 528
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
DTIVLS+GEN+EP LE+A + S LI Q++++GQD+++ G ++VP E +
Sbjct: 529 DTIVLSSGENIEPGPLEDALVASPLIEQVMLVGQDRKQLGGLLVPRPEAL 578
>gi|452822005|gb|EME29029.1| long-chain acyl-CoA synthetase [Galdieria sulphuraria]
Length = 762
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/538 (40%), Positives = 324/538 (60%), Gaps = 54/538 (10%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L + I A L+ IG+K K+ L S+NS RWLV DQ ++ GA + VRGS + EL
Sbjct: 151 ELHRSIQACAVALKRIGLKKGNKVCLISENSYRWLVLDQAVMTIGAASAVRGSGAPLLEL 210
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+IY HSES+ L EN + R+ E L S+ ++F I+LWGK P ++ +FS+D
Sbjct: 211 CYIYEHSESIGLVAENAQVLVRLVEKLGSEK-LKFAIILWGK----VPTDFPQLKIFSFD 265
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I G ++ N+ + S D+AT +YTSGTTG PKGV LTH+NLL+QI
Sbjct: 266 SLIQEG------WNYQNEVSVPFA----SSSDLATLIYTSGTTGRPKGVELTHENLLYQI 315
Query: 235 RSLYDI-----VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
S+ DI VP G+ F+S+LP WHV+ER YF F+RG+ ++Y+ VRNL++DLQ +
Sbjct: 316 ASI-DIGKCCPVP---GNVFVSILPCWHVFERTAEYFFFARGVCVVYSNVRNLRNDLQLH 371
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY-TAFKRIYEGFCLTRN 348
+P ++++VP V+E+LY+ I I S RR + R IS +Y AF+ ++
Sbjct: 372 KPQFLVAVPRVFESLYNNIMSNISKQSLMRRYLIRMFTFISLSYHRAFRTLF-------- 423
Query: 349 QKQPSYLVALID---W--LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 402
S + ID W L A + L+ H LA +V+ KI+S +G + G+ GGGS
Sbjct: 424 ----SLDIFRIDSRFWKKLKAFFVLIALFTFHKLANWIVWSKIRSVLGGRVQCGICGGGS 479
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC-NVLGSVGHPINHTEIKIVDAETN 461
LP +++ FY + GV + VGYGLTE+SPV++ RRP N+LGS G + T++K+V ET
Sbjct: 480 LPFYLEEFYASTGVCLLVGYGLTETSPVVSHRRPGLENMLGSSGRCLPGTQVKVVHPETK 539
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
E L G G++ VRG V++GY++ P + L EDG+ N+GD+ WI P++
Sbjct: 540 EELKHGDIGLLLVRGPGVVRGYYREPERSDVFL-EDGFFNSGDLAWIVPNN--------- 589
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G +V+ GR KD IVL+ GEN+EP +E+A L S L Q++++GQD+R GA++VP E
Sbjct: 590 GHIVISGRYKDVIVLNNGENIEPQPIEDAILESPLFDQVILVGQDERHLGALLVPSLE 647
>gi|88809271|ref|ZP_01124780.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
gi|88787213|gb|EAR18371.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
Length = 647
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/593 (38%), Positives = 337/593 (56%), Gaps = 41/593 (6%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F ++L I A R IGV + +SLF++NS RWLVADQG++ TGAI+ VRG+ +
Sbjct: 59 FSYAELADRISLAAAAFRRIGVTTGDVVSLFAENSPRWLVADQGLMRTGAIDAVRGAAAP 118
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I S SVAL V+N E R+ + +RF+++L G+ APD
Sbjct: 119 VEELRYILKDSASVALVVQNAELLQRLELPGSWREQLRFVLVLEGE----APD-----GA 169
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
FS+D L R D AR+ + AT +YTSGTTG PKGV L+H NL
Sbjct: 170 FSFDAF--LARGELALAPDPLLARERAS----ATSTTATLLYTSGTTGRPKGVPLSHANL 223
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ+RSL + E GD LS+LP WH YER+ Y+ FS YT ++ LK DL R +
Sbjct: 224 LHQMRSLACVARPEAGDPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVR 283
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M++VP ++E + +G + T AR+ + +A + S AY +R L +K
Sbjct: 284 PVVMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAALANSAAYALARRRSRNLMLDPVRK 343
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHID 408
+ D + A + WP H LA +L++ +++ + G + ++GGG++ H+D
Sbjct: 344 R--------DRVIAAAEASSRWPAHALAARLIWPQVRRQLSGGSLRFPINGGGAIAPHVD 395
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +I+DAET L
Sbjct: 396 SFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPETEFRILDAETRLPLGYRQ 455
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V+VRG QVM+GY P AT + LD +GW +TGD+G + P G +VL G
Sbjct: 456 RGVVQVRGPQVMRGYLGKPEATAKVLDAEGWFDTGDLGLLLPD----------GSVVLTG 505
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV-LMAAKR 587
RAKDTIVLS+GEN+EP LEE + S LI Q++++GQD+R+ GA++VP E + A+ +
Sbjct: 506 RAKDTIVLSSGENIEPGPLEETLVASPLIEQVMLVGQDERQLGALVVPRLEAMRAWASDQ 565
Query: 588 LSIVHADASELSKEKTI-SLLYGELRKWTSKCSFQIGPIHVVD----EPFTVN 635
++ D + + LL GEL + S G +V EPF+++
Sbjct: 566 IADPGEDLGGSPGDPGLRRLLRGELNRLLSDRVGARGDERLVGVALVEPFSID 618
>gi|87301166|ref|ZP_01084007.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
gi|87284134|gb|EAQ76087.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
Length = 653
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/589 (37%), Positives = 329/589 (55%), Gaps = 35/589 (5%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L+ I + +G+ E ++LF++NS RWLVADQG++ GA + VRGS + EEL
Sbjct: 63 ELDDRIQRASAAFASLGLGEGEVVALFAENSPRWLVADQGIMRCGAADAVRGSGAPLEEL 122
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I + S +V L VE+ R+A+ + +RF+++L + S +P
Sbjct: 123 RYILDDSGAVGLVVESAALLERLAQEPGALGGLRFVVVLEDRAPSGNGTPPSPVPR---- 178
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
L E+ +A S DA + G + +AT +YTSGTTG PKGV L+ NLLHQ+
Sbjct: 179 ---QLSWEAFEALGCSQDA-AAPPLPSGGPERLATLLYTSGTTGRPKGVPLSQANLLHQL 234
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R+L V D+ LS+LP WH YER YF+ S G YT +++L+ DLQR +P YM
Sbjct: 235 RTLGVAVAPRPADRVLSVLPIWHAYERTAEYFLLSCGCRQSYTTLKHLRPDLQRVRPQYM 294
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++E L +G + + +R+ + R +R+S + +R L ++ P
Sbjct: 295 ISVPRLWEALLAGFEDALEAMPPSRQGLIRQALRLSRWHGQSRRRALDLTL-ESESLPGR 353
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYE 412
L A + WL + WP H LA L++ K++ + G + +SGGG+L +H+D F+E
Sbjct: 354 LAAGLGWL-------LSWPGHGLASVLLWPKVRQQLSGGALRTAISGGGALALHVDGFFE 406
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+++ VGYGLTE+SPV+A RRP N GS G P+ TE++IVD ++ L +G V
Sbjct: 407 AIGIELLVGYGLTETSPVLACRRPWRNRRGSAGQPLPETELRIVDPDSGAALGWRQRGRV 466
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
RG QVM GYF P AT LD GW +TGD+G + G LVL GRAKD
Sbjct: 467 LARGPQVMAGYFGKPEATAAVLDAAGWFDTGDLGHLL----------ADGTLVLTGRAKD 516
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-RLSIV 591
TIVLS+GEN+EP LEEA + L+ Q++++GQD+R+ A++VP E + A+ R V
Sbjct: 517 TIVLSSGENIEPGPLEEALVAHPLVEQVMLVGQDRRQLAALVVPRPEPLAAFARARELPV 576
Query: 592 HADASELSKEKTISLLYGELRKW-----TSKCSFQIGPIHVVDEPFTVN 635
++ + + L GE + S+ ++ + +V EPF++
Sbjct: 577 PGTTADPADRALLKALSGEFNRLLAARPGSRPDERLAGVALV-EPFSIE 624
>gi|113955509|ref|YP_729826.1| long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
gi|113882860|gb|ABI47818.1| Long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
Length = 632
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 320/548 (58%), Gaps = 38/548 (6%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F +L Q I A G R +G++ + + LF++NS RWL+ADQG++ TGA + VRGS +
Sbjct: 44 FTYQELSQRITTAAAGFRALGIREGDVVGLFAENSPRWLMADQGLMRTGAADAVRGSSAP 103
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I +++VAL V+N + + R+ + +RF++ L G +V D++
Sbjct: 104 VEELRYILEDAKAVALVVQNADLWQRLQLPAQLRRQLRFVLQLEG--DAVDSDVI----- 156
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
S+D+++ G E + D + + AT +YTSGTTG PKGV L+H NL
Sbjct: 157 -SWDDLLAAGAEQQAPDPDLG------RDAASAASTTATILYTSGTTGQPKGVPLSHANL 209
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ+RSL + E G LS+LP WH YER+ Y+ FS YT ++ LK DL R +
Sbjct: 210 LHQMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVK 269
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M++VP ++E + +G + + T A+R+ + RA + S AY CL R Q+
Sbjct: 270 PVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALSNSSAY----------CLARRQR 319
Query: 351 QPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMH 406
L+ L L A + A WP H LA KL++ K+ Q + G + ++GG ++ H
Sbjct: 320 CNLMLMPLGRRQRLMACLKSAGRWPAHALASKLIWPKLRLQLSGGQLRFPINGGAAIAPH 379
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE IVD E+ L
Sbjct: 380 VDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQPMPQTEFMIVDPESRAPLSF 439
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
+G+V VRG QVMQGY P AT + LD DGW +TGD+G + P G +VL
Sbjct: 440 RERGLVLVRGPQVMQGYLGKPEATAKVLDVDGWFDTGDLGMLLPD----------GSVVL 489
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GRAKDTIVLS+GEN+EP LE L + ++ Q++++GQD+++ A+IVP+++ + A+
Sbjct: 490 TGRAKDTIVLSSGENIEPGPLEAHLLMNPVVEQVLLVGQDKKQLAALIVPNQDGLRQFAE 549
Query: 587 RLSIVHAD 594
I + D
Sbjct: 550 NKEIENID 557
>gi|148238916|ref|YP_001224303.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
gi|147847455|emb|CAK23006.1| Long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
Length = 647
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/531 (40%), Positives = 305/531 (57%), Gaps = 35/531 (6%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F ++L I A R GVKP + + LF++NS RWLVADQG++ GAI+ VRG+ +
Sbjct: 59 FSYAELADRISLAAAAFRRFGVKPGDVVGLFAENSPRWLVADQGLMRAGAIDAVRGAAAP 118
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I S SVAL V+N E R+ + + F+++L G + A
Sbjct: 119 VEELRYILEDSGSVALVVQNAELLQRLQLPAAWRETLHFVLVLEGDAPADA--------- 169
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
S+D + G A + + D + S AT +YTSGTTG PKGV LTH NL
Sbjct: 170 LSFDAFLAQG-----ALASAPDPLLGRDRASATST-TATLLYTSGTTGRPKGVPLTHANL 223
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ+RSL + E GD LS+LP WH YER+ Y+ FS YT ++ LK DL R +
Sbjct: 224 LHQMRSLACVARPEAGDPVLSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVR 283
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M++VP ++E + +G + T AR+ + +A + S A+ +R L +K
Sbjct: 284 PVVMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAALANSAAFALARRRSRNLLLDPVRK 343
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHID 408
+ L A + WP H LA +L++ K+ Q + G + ++GGG++ H+D
Sbjct: 344 RDRVLAA--------AEASSRWPAHALASRLIWPKVRLQLSGGSLRFPINGGGAIAPHVD 395
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD ET L
Sbjct: 396 SFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPETEFRIVDGETRRPLGYRQ 455
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G+V+VRG QVM GY P AT + LD +GW +TGD+G + P G +VL G
Sbjct: 456 RGVVQVRGPQVMGGYLGKPEATAKVLDAEGWFDTGDLGLLLPD----------GSVVLTG 505
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
RAKDTIVLS+GEN+EP LEE + S LI Q++++GQD+R+ GA++VP E
Sbjct: 506 RAKDTIVLSSGENIEPGPLEETLVASPLIEQVMLVGQDERQLGALVVPRLE 556
>gi|148242895|ref|YP_001228052.1| long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
gi|147851205|emb|CAK28699.1| Long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
Length = 650
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 293/524 (55%), Gaps = 37/524 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L + I A L G+ P + ++ F++N RWL DQG++ GA N VRGS++ EEL
Sbjct: 63 LHERIAQVAACLAAQGIGPGDVVAQFAENGPRWLAVDQGLMRLGAANAVRGSQAPVEELA 122
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I + AL +E+ + + + A +RF++LL G+ P +P+ S+ E
Sbjct: 123 YILGDCGARALVLEDASLLEPL-QAAGALAGLRFVLLLHGE----VPASGASVPLLSWQE 177
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
++ G + +AT +YTSGTTG PKGV L+ NLLHQ+R
Sbjct: 178 LLASGVHRSAVLEPAEGPESR----------LATILYTSGTTGRPKGVPLSQANLLHQVR 227
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMI 295
+L V + G++ LS+LP WH YER+ GY + SRG YT +R K DLQR +PHY+I
Sbjct: 228 TLGVAVSPQPGERVLSVLPIWHAYERSAGYLLLSRGCSQSYTNLRQFKGDLQRVRPHYLI 287
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC---LTRNQKQP 352
SVP ++E LY G Q + A+++ + R + S + R + L +++
Sbjct: 288 SVPRLWEALYGGFQGALEGMPASKQKLLRTALAASQTHARSLRQWRDLADHPLLWSERLA 347
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE 412
+A + W+ A + +LWP + Q A G +SGGG+LP HID F+E
Sbjct: 348 GLALAGLSWVPAALAGQLLWP---------AVRRQLAGGSLGTAISGGGALPKHIDAFFE 398
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+++ VGYGLTE+SPV++ RR N GS G P+ TE+KIVD ++ L G +G+V
Sbjct: 399 AIGIELLVGYGLTETSPVLSCRRRWANRRGSAGRPLPGTELKIVDPDSRRTLQQGERGLV 458
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
RG QVM+GY P AT + LD + W NTGD+G + G L L GRAKD
Sbjct: 459 LARGPQVMKGYLNRPEATGEVLDTEAWFNTGDLGHLL----------ADGSLFLTGRAKD 508
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
TIVLS+GEN+EP LE+ S L+ Q++V+GQDQR+ GA++VP
Sbjct: 509 TIVLSSGENIEPGPLEDELAASELVEQVMVVGQDQRQLGALVVP 552
>gi|159902941|ref|YP_001550285.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9211]
gi|159888117|gb|ABX08331.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9211]
Length = 664
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 307/535 (57%), Gaps = 34/535 (6%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
+ ++L +I A +G+ + +SLF++NS RWL+ DQG++ GA++ VRG+ +
Sbjct: 70 TYSYAELADKISKAASAFNSLGINRGDVVSLFAENSPRWLIVDQGLMRVGAVDAVRGASA 129
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
EL +I S SV L V++ E + ++ K ++F+++L G+ +
Sbjct: 130 PVSELRYILQDSSSVGLIVQSIELWKKLTLNEDQKQQLKFVLVLEGQSTDS--------- 180
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ ++D D +E+ FS + K Y IAT +YTSGTTG PKGV LTH N
Sbjct: 181 LLAWD---DFFQEASTNFSI--EVPKKASYGDKSDSPIATILYTSGTTGKPKGVPLTHAN 235
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 289
LHQI SL I G LS+LP WH YER+ Y+ FS G YT +++ K+DLQR
Sbjct: 236 FLHQISSLACIANPSPGTPLLSVLPIWHSYERSAEYYFFSCGCTQNYTTIKHFKEDLQRV 295
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M +VP ++E++ G I + R+ + +A + S AY R +
Sbjct: 296 KPVVMATVPRLWESVKIGFDDAIKKMPSFRQNIIKAALNNSGAYKLALRKLRNLLIND-- 353
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHI 407
V ++ ++A A+ WP+H ++ L++ K+ + + G ++GGG++ H+
Sbjct: 354 ------VFFLERIFALGEVALRWPVHFMSSCLLWPKVLTQLCGGRLLFPINGGGAIAPHV 407
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
D F+E++GV++ VGYGLTE+SPV++ RRP N+ GS G P+ T +IVD E V+
Sbjct: 408 DQFFESLGVELLVGYGLTETSPVLSCRRPWRNIRGSSGPPLPETAFRIVDPEDGRVMNYR 467
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
KG+V +G QVM+GY N AT + DE+GW NTGD+G + P G LVL
Sbjct: 468 EKGLVLAKGPQVMKGYLGNLKATAKVFDEEGWFNTGDLGMLLPD----------GSLVLT 517
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
GRAKDTIVLS+GEN+EP LEE + S LI+QI+++GQDQ++ GA++VP+ E+VL
Sbjct: 518 GRAKDTIVLSSGENIEPGPLEEVLVASPLIKQIMLVGQDQKQLGALVVPNAEQVL 572
>gi|78213528|ref|YP_382307.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9605]
gi|78197987|gb|ABB35752.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9605]
Length = 637
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 221/594 (37%), Positives = 325/594 (54%), Gaps = 49/594 (8%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F +L + I A R GVK + ++LF++NS RWLVADQG++ GA + VRG+ +
Sbjct: 55 FNFGELAERIATAAAAFRRHGVKEGDVVALFAENSPRWLVADQGLMRAGAADAVRGASAP 114
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I + ++ AL V+N E + R+A +A +RF++ L G+ + A
Sbjct: 115 VEELCYILSDCQATALVVQNAEVWRRLALPPDQRAQLRFVLQLEGEPAEGA--------- 165
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
+G E+ A D G D +AT +YTSGTTG PKGV LTH NL
Sbjct: 166 --------MGWEAFLASGAGLDPVGPAG----GRDAVATVLYTSGTTGQPKGVPLTHANL 213
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ+ SL + E G LS+LP WH YER+ YF S YT ++ LK DL R +
Sbjct: 214 LHQMSSLACVAYPEPGAPVLSVLPIWHAYERSASYFFLSCACTQTYTTIKQLKKDLPRVR 273
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP ++E + +G + + T +R+ + RA + S A R L
Sbjct: 274 PIAMATVPRLWEAVQAGFEDVLKTFPPSRQRLLRAALANSAAQRKAVRTARNLLL----- 328
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHID 408
+P V+ L A A+ WPLH LA L++ K++ + G +SGGG++ HID
Sbjct: 329 EP---VSASGRLRACGSAALRWPLHALASTLIWPKLRRQLSGGQLAYPISGGGAIAPHID 385
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD + + L
Sbjct: 386 AFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPQTEFRIVDPDNGQPLGFRQ 445
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G V VRG QVM GY P A+ + LD GW +TGD+G + P G + L G
Sbjct: 446 RGRVMVRGPQVMVGYLGKPEASAKVLDTAGWFDTGDLGMLLPD----------GSVALTG 495
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR- 587
RAKDTIVLS+GEN+EP LEEA + S LI Q++++GQD+R+ GA+IVP E ++ A
Sbjct: 496 RAKDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGALIVPRAEAIVAWAAEA 555
Query: 588 -LSIVHADASELSKEKTISLLYGEL-----RKWTSKCSFQIGPIHVVDEPFTVN 635
+++ + + LL E ++W S+ ++ + +VD PF++
Sbjct: 556 CVNVAQDLGGQPGDPALLRLLMRECNRLLKQRWGSRGDERLAGVVLVD-PFSIE 608
>gi|260435335|ref|ZP_05789305.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
gi|260413209|gb|EEX06505.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
Length = 637
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 213/536 (39%), Positives = 305/536 (56%), Gaps = 42/536 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F +L + I A R GVK + ++LF++NS RWLVADQG++ GA + VRG+ +
Sbjct: 55 FNFGELAERIATAAAAFRRHGVKDGDVVALFAENSPRWLVADQGLMRAGAADAVRGASAP 114
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I + ++ AL V+N + + R+A +A +RF++ L G+ + A
Sbjct: 115 VEELRYILSDCQATALVVQNADLWRRLALPPDQRAQLRFVLQLEGEPAEGA--------- 165
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
+G E+ A D G D +AT +YTSGTTG PKGV LTH NL
Sbjct: 166 --------IGWEAFLASGAGLDP----VCPAGGRDAVATVLYTSGTTGQPKGVPLTHANL 213
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ+ SL + E G LS+LP WH YER+ YF S G YT ++ LK DL R +
Sbjct: 214 LHQMSSLACVAYPEPGAPVLSVLPIWHAYERSASYFFLSCGCTQTYTTIKQLKKDLPRVR 273
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP ++E + +G + + T +R+ + RA + S A R L
Sbjct: 274 PIAMATVPRLWEAVQAGFEDVLKTFPPSRQRLLRAALANSAAQRKALRTARNLLL----- 328
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHID 408
+P V+ D L A A+ WPLH LA L++ K++ + G +SGGG++ HID
Sbjct: 329 EP---VSASDRLRACGSAALRWPLHALASTLIWPKLRRQLSGGQLAYPISGGGAIAPHID 385
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD + + L
Sbjct: 386 AFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPQTEFRIVDPDNGQPLGFRQ 445
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G V VRG QVM GY P A+ + LD GW +TGD+G + P G + L G
Sbjct: 446 RGRVMVRGPQVMAGYLGKPEASAKVLDAAGWFDTGDLGMLMPD----------GSVALTG 495
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
RAKDTIVLS+GEN+EP LEEA + S LI Q++++GQD+R+ G +IVP + EV++A
Sbjct: 496 RAKDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGGLIVP-RAEVIVA 550
>gi|78184237|ref|YP_376672.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9902]
gi|78168531|gb|ABB25628.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9902]
Length = 645
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 215/597 (36%), Positives = 331/597 (55%), Gaps = 47/597 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F +L + I A GV+ + ++LFS+NS RWLVADQ ++ GA + VRG+ +
Sbjct: 55 FSFGELAERIATAAAAFDAKGVRKGDVVALFSENSPRWLVADQALMRCGAADAVRGASAP 114
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I S++ AL V+N + + R+A T + ++ ++ L G D V+ +
Sbjct: 115 VEELRYILEDSKATALVVQNADLWRRLALTPAQRTRLKVVVQLEG-------DPVDGL-- 165
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
+D ++ S S + I ++ +AT +YTSGTTG PKGV LTH NL
Sbjct: 166 TGWDTLL----SSAAGLSPVTRTQNLDGDGKIAANQVATILYTSGTTGQPKGVPLTHANL 221
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQIRSL + + GD LS+LP WH YER+ YF S YT ++ LK DL R Q
Sbjct: 222 LHQIRSLACVAYPKPGDPVLSVLPIWHAYERSASYFFLSCACTQTYTTIKQLKKDLPRVQ 281
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP ++E++ +G + + T +R+ + RA + S A R +
Sbjct: 282 PIAMATVPRLWESVQAGFEDVVKTFPPSRQRLLRAALSNSSAQRQALR-----------R 330
Query: 351 QPSYLVALIDW---LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPM 405
+ ++ + W A + + WPLH LA L++ K++ + + +SGGG++
Sbjct: 331 ASNLMLEPVPWAGRFQAAGVALLRWPLHALASALLWPKVRRQLSGGQLAYPISGGGAIAP 390
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
HID F+EA+G+++ VGYGLTE+SPVI+ RRP N+ GS G P+ TE +IVD E+ +L
Sbjct: 391 HIDAFFEAVGIELLVGYGLTETSPVISCRRPWHNIRGSSGLPLPGTEFRIVDPESGTLLG 450
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
+G V VRG QVM GY+ P AT + LD DGW +TGD+G + G +
Sbjct: 451 CRQRGRVLVRGPQVMAGYWGKPDATAKVLDADGWFDTGDLGMLL----------ADGSVA 500
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
L GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQD+R+ A+IVP + +++ A
Sbjct: 501 LTGRAKDTIVLSSGENIEPGPLEEVLVASPLIEQVMLVGQDERQLAALIVPRADVIVVWA 560
Query: 586 KR--LSIVHADASELSKEKTISLLYGELRKWT-----SKCSFQIGPIHVVDEPFTVN 635
+ LS+ + + + + LL E + ++ ++ + +VD PFT++
Sbjct: 561 GQQGLSLANDLGGKPGDQALLRLLMQECNRLLKQRVGARGDERLAGVVLVD-PFTID 616
>gi|33865203|ref|NP_896762.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH 8102]
gi|33638887|emb|CAE07184.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
8102]
Length = 637
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 207/533 (38%), Positives = 302/533 (56%), Gaps = 41/533 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F ++L Q I A + GV+ + ++LF++NS RWLVADQG++ GA + VRG+ +
Sbjct: 55 FSFAELAQRIATAAAAFQRQGVQEGDVVALFAENSPRWLVADQGLMRCGAADAVRGASAP 114
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EEL +I + + AL V+N + + R+ T + +R ++ L G+ E V
Sbjct: 115 VEELRYILDDCNATALVVQNADLWRRLDLTASQRQGLRLVLQLEGEP---------EQGV 165
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
++ + G A + T IAT +YTSGTTG PKGV LTH NL
Sbjct: 166 LGWEAFLASG------------AGQQSVTPTSARTAIATVLYTSGTTGQPKGVPLTHANL 213
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQ++SL + + G LS+LP WH YER+ Y+ S YT ++ LK DL R +
Sbjct: 214 LHQMQSLACVAHPQPGAPVLSVLPIWHAYERSASYYFLSCACTQTYTNIKQLKKDLPRVR 273
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP ++E++ +G + + T +R+ + RA + S A+ R L
Sbjct: 274 PIAMATVPRLWESVQAGFEDVVKTFPPSRQRLLRAALANSAAHRKAVRTARNLLL----- 328
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHID 408
QP VAL + A + A+ WPLH LA L++ K+ Q + G +SGGG++ HID
Sbjct: 329 QP---VALPGRMTAAAVAALRWPLHALASALIWPKLRLQLSGGRLAYPISGGGAIAPHID 385
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD E+ L
Sbjct: 386 AFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGLPMPDTEFRIVDQESGASLGFRE 445
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G V VRG QVM GY P A+ + L DGW +TGD+G + P G + L G
Sbjct: 446 RGRVLVRGPQVMGGYLGKPEASAKVLSADGWFDTGDLGMLLPD----------GSVALTG 495
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
RAKDTIVLS+GEN+EP LEEA + S LI Q++++GQD+R+ GA++VP E +
Sbjct: 496 RAKDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGALLVPRVEPI 548
>gi|116075040|ref|ZP_01472300.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
gi|116067237|gb|EAU72991.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
Length = 658
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 214/569 (37%), Positives = 319/569 (56%), Gaps = 47/569 (8%)
Query: 78 LSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRI 137
+ LF++NS RWLVADQ ++ GA + VRG+ + ELL+I S +VAL V+N E R+
Sbjct: 97 VGLFAENSPRWLVADQALMRAGATSAVRGAAAPVPELLYILEDSAAVALVVQNAELLTRL 156
Query: 138 AETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHY 197
A ++ +R +I L G+ + V S++ ++ G E D R
Sbjct: 157 ALPEAVRSRLRCVIQLEGEAAEG---------VISFEALLAQGAEVMP--PDPLAGRGID 205
Query: 198 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 257
T AT +YTSGTTG PKGV LTH NLLHQIRSL + G LS+LP WH
Sbjct: 206 SAATT----TATILYTSGTTGQPKGVPLTHANLLHQIRSLACVAHPAPGSPVLSVLPIWH 261
Query: 258 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 317
YER+ Y+ FS YT ++ LK DL R +P M +VP ++E + +G + + T A
Sbjct: 262 SYERSAEYYFFSCACSQSYTTIKQLKKDLPRVKPVVMATVPRLWEAVQAGFEDVLKTFPA 321
Query: 318 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL--IDWLWARIICAILWPLH 375
+R+ + R+ + S AY CL R + + + +L L A + + WP H
Sbjct: 322 SRQRLLRSALANSSAY----------CLARRRSRDLMVESLGKRQRLKAALEASRRWPAH 371
Query: 376 LLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 433
+A KL++ K+ Q + G + ++GGG++ H+D FYEA+G+++ VGYGLTE+SPV++
Sbjct: 372 AVASKLIWPKLRLQLSGGQLQFPINGGGAIAPHVDAFYEAVGIELLVGYGLTETSPVVSC 431
Query: 434 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 493
RRP N+ GS G P+ TE +IVD ET L +G+V VRG QVM GY P AT +
Sbjct: 432 RRPWRNIRGSSGQPLPDTEFRIVDPETRAPLGFRERGVVLVRGPQVMGGYLGKPEATAKV 491
Query: 494 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 553
LD +GW +TGD+G + P G +VL GRAKDTIVLS+GEN+EP LEE +
Sbjct: 492 LDGEGWFDTGDLGLLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEECLVA 541
Query: 554 SSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGEL 611
S L+ Q++++GQD+++ GA++VP E + A + LS+ + + LL GE
Sbjct: 542 SPLVEQVMLVGQDEKQLGALVVPRLEAIQAWAAEQGLSLADDLGGSPGEPALLKLLRGEF 601
Query: 612 RKW-----TSKCSFQIGPIHVVDEPFTVN 635
+ ++ ++ + +V +PFT++
Sbjct: 602 NRLLAGRHGARADERLAGVGLV-QPFTID 629
>gi|116071118|ref|ZP_01468387.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
gi|116066523|gb|EAU72280.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
Length = 653
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 226/640 (35%), Positives = 347/640 (54%), Gaps = 55/640 (8%)
Query: 15 SSLDYHRHGFRVFTRNCVDAV----------ATRIRISRRNHRFRVFCESKLEQEILDFA 64
+SL H H + FTR VDA+ T + H R F +L + I A
Sbjct: 21 TSLQRHGH-TQSFTR--VDAMWPWLADRHGTITALDAPHATHPER-FSFGELAERIATAA 76
Query: 65 EGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESV 124
GV+ ++ ++LFS+NS RWLVADQ ++ GA + VRG+ + EEL +I + S++
Sbjct: 77 AAFDAKGVREKDVVALFSENSPRWLVADQALMRCGAADAVRGASAPVEELRYILDDSKAT 136
Query: 125 ALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
AL V+N + ++R+A T + ++ ++ L G+ + +D ++ S
Sbjct: 137 ALVVQNADLWSRLALTPEQRTRLKVVVQLEGEPVDG---------LIGWDALL----SSA 183
Query: 185 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
+ N + GS+ +AT +YTSGTTG PKGV LTH NLLHQIRSL + +
Sbjct: 184 AGLAPVNRTQTLDGDGDCGSNQVATILYTSGTTGQPKGVPLTHANLLHQIRSLACVAYPQ 243
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
GD LS+LP WH YER+ Y+ S YT ++ LK DL R QP M +VP ++E++
Sbjct: 244 PGDPVLSVLPIWHAYERSASYYFLSCACTQTYTTIKQLKKDLPRVQPIAMATVPRLWESV 303
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
+G + + T +R+ + RA + S A R L +P V A
Sbjct: 304 QAGFEDVVKTFPPSRQRLLRAALSNSSAQRQALRRANNLML-----EP---VCWAGRFQA 355
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGY 422
+ + WPLH LA L++ K++ + + +SGGG++ HID F+EA+G+++ VGY
Sbjct: 356 AGVACLRWPLHALASALLWPKVRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGY 415
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SPVI+ RRP N+ GS G P+ TE ++VD E+ L +G V VRG QVM G
Sbjct: 416 GLTETSPVISCRRPWHNIRGSSGLPLPGTEFRVVDPESGMSLGCRERGRVLVRGPQVMGG 475
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+ P AT + LD +GW +TGD+G + G + L GRAKDTIVLS+GEN+
Sbjct: 476 YWGKPDATAKVLDAEGWFDTGDLGMLL----------ADGSVALTGRAKDTIVLSSGENI 525
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSK 600
EP LEE + S LI Q++++GQD+R+ A+IVP + ++ A + LS+ + +
Sbjct: 526 EPGPLEEVLVASPLIEQVMLVGQDERQLAALIVPRADVIVDWAGQQGLSLANDLGGKPGD 585
Query: 601 EKTISLLYGE-----LRKWTSKCSFQIGPIHVVDEPFTVN 635
+ + LL E ++ ++ ++ + +VD PFT++
Sbjct: 586 QALLRLLMKEGNRLLKQRVGARGDERLAGVALVD-PFTID 624
>gi|124023832|ref|YP_001018139.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9303]
gi|123964118|gb|ABM78874.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9303]
Length = 621
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 328/579 (56%), Gaps = 42/579 (7%)
Query: 46 HRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVR 105
RFR +L ++I A +G+ + ++ F++NS RWL+ADQG++ TGA N VR
Sbjct: 30 ERFRY---GELAEQIALAAAAFSHLGIGAGDVVAFFAENSPRWLIADQGLMRTGAANAVR 86
Query: 106 GSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV 165
G+ + EEL +I S +VAL V+N E ++++A T + +R ++ L G+ +
Sbjct: 87 GATAPLEELRYILADSSAVALVVQNAELWHKLALTDEQRRPLRLVLQLEGEPADG----- 141
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
V + E++ G + + D R T+ AT +YTSGTTG PKGV L
Sbjct: 142 ----VMGWQELLATG--AGQPAPDPLKDRDSGSAATV----TATILYTSGTTGQPKGVPL 191
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
+H NLLHQ+R L + G+ LS+LP WH YER+ Y+ FS YT ++ LK D
Sbjct: 192 SHANLLHQMRCLACVAFPSPGEPVLSVLPIWHAYERSAEYYFFSCACTQSYTTIKQLKRD 251
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L R +P M +VP ++E + +G + + R+ L+R++ A + +R + +
Sbjct: 252 LPRVRPIVMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLLRMALANSGSQR--KAWRR 305
Query: 346 TRNQK-QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGS 402
+RN +P V L A + + WPLH LA L++ K+ + + G + ++GGG+
Sbjct: 306 SRNLLLEP---VPLTTRTLALLEATLRWPLHGLAGALLWPKVLNQLCGGRLRFPINGGGA 362
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
+ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD E+
Sbjct: 363 IAPHVDAFFEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSSGPPLPDTEFRIVDPESGA 422
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
L +G V VRG QVM GY + P AT + LD GW +TGD+G + P G
Sbjct: 423 ALMFRQRGRVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGDLGMLLPD----------G 472
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
LVL GRAKDTIVLS+GEN+EP LE A + S L+ Q++++GQD+R+ A++VP +EE+L
Sbjct: 473 SLVLTGRAKDTIVLSSGENIEPGPLEAALVASPLLEQVMLVGQDERQLAALVVPREEEML 532
Query: 583 MAA--KRLSIVHADASELSKEKTISLLYGELRKWTSKCS 619
A + LS+ + E LL GEL + ++ S
Sbjct: 533 AWAEDQGLSMQTGLSGSPGDEALRRLLRGELNRLLAQRS 571
>gi|87125603|ref|ZP_01081448.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
gi|86166903|gb|EAQ68165.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
Length = 648
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 222/575 (38%), Positives = 326/575 (56%), Gaps = 43/575 (7%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G++ + + LF++NS RWLVADQG++ GA+ VRG+ + EEL +I + +VAL V+
Sbjct: 79 LGLRSGDVVGLFAENSPRWLVADQGLMRAGAVAAVRGAAAPVEELRYILDDCGAVALVVQ 138
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSD 189
N E + R+A A +RF++ L G+ AP+ V +D + R D
Sbjct: 139 NAEIWRRLALPPQLHARLRFVLQLEGE----APEGV-----LDFDTFLAHADGQRPPDPD 189
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 249
R+ T AT +YTSGTTG PKGV L+H NLLHQ+RSL + E G
Sbjct: 190 QGRGRESAATTT------ATILYTSGTTGQPKGVPLSHGNLLHQMRSLACVARPEPGTPV 243
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LS+LP WH YER+ Y+ FS YT ++ LK DL R +P M++VP ++E + +G +
Sbjct: 244 LSVLPIWHAYERSAEYYFFSCACSQSYTTIKQLKRDLPRVKPVVMVTVPRLWEAVQAGFE 303
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
+ T A+R+ + RA + S AY +R L +P V D L AR
Sbjct: 304 DVLKTFPASRQRLLRAALANSSAYGLARRRSRNLML-----EP---VRRRDRLAARAEAL 355
Query: 370 ILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
WP H LA +L++ K+ Q + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+
Sbjct: 356 RRWPAHALASRLIWPKLRLQLSGGQLRYPINGGGAIAPHVDAFFEAVGIELLVGYGLTET 415
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
SPV++ RRP N+ GS G P+ TE +IVD ++ L +G+V VRG QVM GY P
Sbjct: 416 SPVVSCRRPWHNIRGSSGLPMPDTEFRIVDPDSRAPLGFPQRGVVLVRGPQVMAGYLGKP 475
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
AT + LD DGW +TGD+G + P G +VL GRAKDTIVLS+GEN+EP L
Sbjct: 476 EATAKVLDADGWFDTGDLGMLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPL 525
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTIS 605
EEA + S LI Q++++GQD+R+ GA++VP E + A + L + + +
Sbjct: 526 EEALVASDLIEQVMLVGQDERQLGALVVPRAEAMRAWAADQGLQLAEDLGGSPGDDNLLR 585
Query: 606 LLYGELRKW-----TSKCSFQIGPIHVVDEPFTVN 635
LL GEL + S+ ++ I +V EPF++
Sbjct: 586 LLRGELNRLLSQRPGSRADERLAGIALV-EPFSIE 619
>gi|124025167|ref|YP_001014283.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL1A]
gi|123960235|gb|ABM75018.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. NATL1A]
Length = 657
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 205/534 (38%), Positives = 304/534 (56%), Gaps = 38/534 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F +L + I A +GV+P+E ++LF++NS RWL+ADQG++ GA + VRG+ +
Sbjct: 70 FTYEELAENISMAASAFSQVGVEPDEVVALFAENSPRWLIADQGLMRIGATDSVRGATAP 129
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EL +I S++V L V+N + + R++ +++F++ L GK V
Sbjct: 130 PSELRYILEDSKAVGLIVQNSDVWERLSLNDDQINSLKFVLQLEGKACE---------GV 180
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
F ++ + G + + K K IAT +YTSGTTG PKGV LTH NL
Sbjct: 181 FEWETFLKKGL-------NIENVSKQEKIIDRQQKRIATILYTSGTTGKPKGVPLTHSNL 233
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQIRSL + G LS+LP WH YER+ Y+ FS G YT++R+LK+DL R +
Sbjct: 234 LHQIRSLACVANPSPGAPVLSVLPIWHSYERSAEYYFFSCGCTQTYTSIRHLKEDLPRVK 293
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRIYEGFCLTRNQ 349
P M +VP ++E++ G + + R+ + ++ I S AY A +++Y F +
Sbjct: 294 PIVMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSAISNSKAYKLARRKLY--FLTIESV 351
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHI 407
L++ I+ L + +P+H ++ ++ KI + I G + +SGGG++ HI
Sbjct: 352 SSFEQLISCIEIL-------LRYPIHRISSIYLWPKILTKICGGKLRFPISGGGAIAPHI 404
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
D F+EA+GV++ VGYGLTE+SPV+ RRP N+ G G P+ TEIKIVD ET ++
Sbjct: 405 DSFFEALGVELLVGYGLTETSPVLTCRRPWRNIRGGAGQPLPETEIKIVDPETFQIKKLR 464
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
KG+V RG Q+M GY S +K+ LD GW NTGD+G + G L+L
Sbjct: 465 QKGLVLARGPQIMSGYLGKRSESKKVLDATGWFNTGDLGMLL----------SDGSLILT 514
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GRAKDTIVLS+GEN+EP LEE + S LI Q +++GQDQ+ A+IVP + V
Sbjct: 515 GRAKDTIVLSSGENIEPGPLEECLIASPLIEQALLLGQDQKYLAALIVPRIDHV 568
>gi|33862488|ref|NP_894048.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9313]
gi|33640601|emb|CAE20390.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9313]
Length = 664
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 322/578 (55%), Gaps = 40/578 (6%)
Query: 46 HRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVR 105
RFR +L ++I A +G+ + ++ F++NS RWL+ADQG++ TGA N VR
Sbjct: 73 ERFRY---GELAEQIALAAAAFSHLGIGAGDVVAFFAENSPRWLIADQGLMRTGAANAVR 129
Query: 106 GSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV 165
G+ + EEL +I S +VAL V+N E ++++A T + +R ++ L G+ +
Sbjct: 130 GATAPLEELRYILADSRAVALVVQNAELWHKLALTDEQRRPLRLVLQLEGEPADG----- 184
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
V + E++ G + + D R T+ AT +YTSGTTG PKGV L
Sbjct: 185 ----VMGWQELLAAG--AGQPAPDPLKDRDSGSAATV----TATILYTSGTTGQPKGVPL 234
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
+H NLLHQ+R L + G LS+LP WH YER+ Y+ FS YT ++ LK D
Sbjct: 235 SHANLLHQMRCLACVAFPSPGAPVLSVLPIWHAYERSAEYYFFSCACTQSYTTIKQLKRD 294
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L R +P M +VP ++E + +G + + R+ L+R++ A + +R
Sbjct: 295 LPRVRPIVMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLLRMALANSGSQRK----AW 346
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSL 403
R++ + L A + + WPLH LA L++ K+ + + G + ++GGG++
Sbjct: 347 RRSRNLLLEPLPLTTRTLALLEATLRWPLHGLAGALLWPKVLNQLCGGRLRFPINGGGAI 406
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G P+ TE +IVD E+
Sbjct: 407 APHVDAFFEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSSGPPLPETEFRIVDPESGVD 466
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
L +G V VRG QVM GY + P AT + LD GW +TGD+G + P G
Sbjct: 467 LMFRQRGRVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGDLGMLLPD----------GS 516
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 583
LVL GRAKDTIVLS+GEN+EP LE A + S L+ Q++++GQD+R+ A++VP +EE+L
Sbjct: 517 LVLTGRAKDTIVLSSGENIEPGPLEAALVASPLLEQVMLVGQDERQLAALVVPREEEMLA 576
Query: 584 AAKRLSIVHAD--ASELSKEKTISLLYGELRKWTSKCS 619
A+ ++ + E LL GEL + ++ S
Sbjct: 577 WAEDQGLLMQTGLSGSPGDEALRRLLRGELNRLLAQRS 614
>gi|33239851|ref|NP_874793.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237377|gb|AAP99445.1| Long-chain acyl-CoA synthetase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 675
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/520 (39%), Positives = 294/520 (56%), Gaps = 39/520 (7%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+GV + ++LFS+NS RWL+ADQG++ GA N VRGS + EEL +I S SV L V+
Sbjct: 106 LGVVSGDVVALFSENSPRWLIADQGLMRLGASNAVRGSSAPVEELRYILADSRSVGLVVQ 165
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG--RESRKAF 187
+ E + +A + K +F++ + G+ E + ++E + G + AF
Sbjct: 166 SSELWKALALSEDDKKQFKFVLQIEGQP---------ENNLLGWEEFLLKGANKSPINAF 216
Query: 188 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 247
++ + IAT +YTSGTTG PKGV LTH NLLHQ+RSL I G
Sbjct: 217 KEATG--------ITANSSIATILYTSGTTGKPKGVPLTHDNLLHQMRSLACIASPPPGT 268
Query: 248 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 307
LS+LP WH YER+ Y+ FS YT +++ K DLQ +P M +VP ++E + +G
Sbjct: 269 PLLSVLPIWHSYERSAEYYFFSCACSQHYTTIKHFKQDLQTVRPVVMATVPRLWEAVKTG 328
Query: 308 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 367
+ + +R++V +A + S + A R L K + +A +
Sbjct: 329 FDEALKKMPRSRQMVLKAALNNSRLFKAALRKSRNLLLLEINKT-NRAIAFSE------- 380
Query: 368 CAILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 425
WP+H LA KL++ K+ Q + G + ++GGG++ H+D F+EA+GV++ VGYGLT
Sbjct: 381 VVFRWPIHALASKLLWPKVLQQLSGGRLRFPINGGGAIAPHVDTFFEALGVELLVGYGLT 440
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E+SPV++ RR N+ GS G P+ TE +IVD L +G V VRG QVM GY +
Sbjct: 441 ETSPVLSCRRTWRNIRGSSGLPLPETEFRIVDPLNGGPLKFSQQGRVLVRGPQVMNGYLR 500
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
P T + LD+ GW +TGD+G + G +VL GRAKDTIVLS GENVEP
Sbjct: 501 KPEETSKVLDQKGWFDTGDLGMLL----------ADGSIVLTGRAKDTIVLSNGENVEPG 550
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
LEE L S LI QI++IGQD+R+ GA+IVPD +++L A
Sbjct: 551 PLEEFLLGSPLIEQIIMIGQDERQLGALIVPDIDQILKWA 590
>gi|72383573|ref|YP_292928.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL2A]
gi|72003423|gb|AAZ59225.1| long-chain acyl-CoA synthetase [Prochlorococcus marinus str.
NATL2A]
Length = 657
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 301/534 (56%), Gaps = 38/534 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F +L + I A +GV P++ ++LF++NS RWL+ADQG++ GA + VRG+ +
Sbjct: 70 FTYKELAENISKAAFSFTKLGVGPDDVVALFAENSPRWLIADQGLMRIGATDSVRGATAP 129
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
EL +I S +V L V+N + + R++ +++F++ L GK V
Sbjct: 130 PSELRYILEDSNAVGLIVQNSDVWERLSLNDDQINSLKFVLQLEGKACD---------GV 180
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
F ++ + G + + K K IAT +YTSGTTG PKGV LTH NL
Sbjct: 181 FEWESFLKKGL-------NIENVSKQEKIIDRQPKRIATILYTSGTTGKPKGVPLTHSNL 233
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQIRSL + G LS+LP WH YER+ Y+ FS G YT++R+LK+DL R +
Sbjct: 234 LHQIRSLACVANPSPGAPVLSVLPIWHSYERSAEYYFFSCGCTQTYTSIRHLKEDLPRVK 293
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRIYEGFCLTRNQ 349
P M +VP ++E++ G + + R+ + ++ I S AY A +++Y F +
Sbjct: 294 PIVMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSAISNSKAYKLARRKLY--FLTIESV 351
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHI 407
+ + I+ L + +P+H ++ ++ KI + I G + +SGGG++ HI
Sbjct: 352 SSFEQISSFIEIL-------LRYPMHRISSIYLWPKILTKICGGRLRFPISGGGAIAPHI 404
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
D F+EA+GV++ VGYGLTE+SPV+ RRP N+ G G P+ TEIKIVD ET ++
Sbjct: 405 DSFFEALGVELLVGYGLTETSPVLTCRRPWRNIRGGAGQPLPETEIKIVDPETFQIKKLR 464
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
KG+V RG Q+M GY S +K+ LD GW NTGD+G + G L+L
Sbjct: 465 QKGLVLARGPQIMSGYLGKRSESKKVLDATGWFNTGDLGMLL----------SDGSLILT 514
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GRAKDTIVLS+GEN+EP LEE + SSLI Q ++GQDQ+ A+IVP + V
Sbjct: 515 GRAKDTIVLSSGENIEPGPLEECLIASSLIEQAFLLGQDQKYLAALIVPRIDHV 568
>gi|298711624|emb|CBJ32681.1| long chain acyl-CoA synthetase [Ectocarpus siliculosus]
Length = 725
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 303/540 (56%), Gaps = 47/540 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S++ I A L +G++ ++ +S+FS+NS RWL+A+QG++ G N VRG+ + E
Sbjct: 95 SEMRTSIGSMAAALIGLGLEKQDCVSVFSENSYRWLIAEQGIMKAGGCNAVRGATAPVAE 154
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETL------CSKAAMRFIILLW-----GKKSSVAP 162
L +IY SESV VE P+ + E A RF+++L+ GK+ +
Sbjct: 155 LRYIYGDSESVGAVVETPKLLKLLVEEGGKGLEGADGAEPRFLMVLFPGGKNGKELQESL 214
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
+I E I V ++ E +D G + + K AT VYTSGTTG PKG
Sbjct: 215 NIPESIKVVTFSECLDKG----GVLDAAPVVERSMK---------ATLVYTSGTTGKPKG 261
Query: 223 VMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY 276
+LTH NLLHQ+ RS + GD F+S+LP WH++ER YF +RG+ + Y
Sbjct: 262 AVLTHANLLHQVSQNSFDRSEGSPMNPWVGDVFVSILPCWHIFERTAEYFTLTRGVTMGY 321
Query: 277 TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
+ VRN K DL++++PH++I VP + ET++ G+Q Q+ S + A AL R+S
Sbjct: 322 SNVRNFKSDLKKFKPHFLIVVPRLLETIWKGVQTQLEAKSKGAQKAAGALTRVSSLRMKA 381
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG 396
R + G + R+ K AL + ++ + PL L AEKLV+ KI+ +G
Sbjct: 382 ARRFSGTVI-RDSKPKGPEKAL-----SAVLMGVTLPLKLAAEKLVWGKIRDGVGGRVKV 435
Query: 397 VSGG-GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
V G SLP ++ F+E GV+V VGYGLTE+SPVIA R T N G+ G P+ +E+KI
Sbjct: 436 VVSGGSSLPSFLEDFFEMAGVRVLVGYGLTETSPVIANRVATENTKGTTGKPVPGSEVKI 495
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
D ET + + G G + +RG QVM GY NP AT +D+DG+ +TGD+G P
Sbjct: 496 ADQETGQQVAVGQTGKILIRGPQVMSGYQNNPEATAAVIDKDGYFDTGDLGRFNP----- 550
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-ALRSSLIRQIVVIGQDQRRPGAII 574
G L++ GRAKDTIVLS GENVEP LE+A + SLI Q+++ GQD+R GAI+
Sbjct: 551 ----ITGDLIVTGRAKDTIVLSNGENVEPQPLEDAISGACSLIDQVMLFGQDERFLGAIV 606
>gi|320538352|ref|ZP_08038230.1| AMP-binding enzyme [Treponema phagedenis F0421]
gi|320144796|gb|EFW36534.1| AMP-binding enzyme [Treponema phagedenis F0421]
Length = 643
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 213/580 (36%), Positives = 317/580 (54%), Gaps = 47/580 (8%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
+N F+ ++ + +FA GLRVIG K + + L SDN W+ A G++A GA ++
Sbjct: 27 QNGEFQPISYKEMFDCVSNFACGLRVIGCKRGDFIGLISDNRKEWMHASMGIMALGAADI 86
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL---------- 153
RGS + +++ I ES + VE+ +I + + ++ II+L
Sbjct: 87 PRGSDVTDSDIIQILGIVESSFVVVEDDIQTKKIFKNIKELPKIQTIIILDSSVDLESLK 146
Query: 154 --WGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYV 211
W + +E +F+YDEII G+E F N + DDIAT +
Sbjct: 147 TEWAQSEEAKTRSME---IFTYDEIILKGKE----FRVQNPDYVEKQIAETKPDDIATII 199
Query: 212 YTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG 271
+TSGTTG PKGVMLTHKN L Q+ L + G++ LS+LP WHV+ER C Y I
Sbjct: 200 FTSGTTGTPKGVMLTHKNFLSQLPELSKRIILYPGERALSVLPVWHVFERLCEYAIIHAA 259
Query: 272 IELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 329
+ Y+ L D + PH + SVP ++E ++ G+ KQ+ + + ++
Sbjct: 260 AGIAYSKPIGSILLADFAKINPHLLPSVPRIWEAVHDGVFKQLRKKGGISYALFKFFLKA 319
Query: 330 -SFAYTAFKRIYEGFCLT-RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
+ + +R+++ T + +K + +A I WL +L P+HLL + LV+ KI+
Sbjct: 320 GNLRFHYHRRLFKNVAYTSQAEKTVAPFLAFIPWL-------LLTPIHLLGDALVFSKIR 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G + +AGVSGGG+LP +ID F+ GV V GYGLTE++PV+A R + + G++G
Sbjct: 373 LKLGKNFRAGVSGGGALPGNIDEFFWTAGVTVVEGYGLTETAPVVAVRSVSHPIFGTIGT 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
P N+ ++K+VD +T + LP G +G+V VRG VM+GYFK P T+ +D+DGW NTGDIG
Sbjct: 433 PCNYNQVKVVD-DTGKTLPMGEQGVVYVRGDNVMKGYFKRPELTESVIDKDGWFNTGDIG 491
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
+I GG +VL GR KDTIVL GEN+EP+ +E S I VV+GQD
Sbjct: 492 YIC----------LGGEIVLRGRLKDTIVLRGGENIEPVPIEMRLQESQYISLAVVVGQD 541
Query: 567 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 606
QR GA+I+PD+ E+ AK I +E S EK I L
Sbjct: 542 QRYLGALILPDEAELQAWAKSQHI-----AEESMEKLIEL 576
>gi|123965699|ref|YP_001010780.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9515]
gi|123200065|gb|ABM71673.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9515]
Length = 641
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 219/587 (37%), Positives = 317/587 (54%), Gaps = 58/587 (9%)
Query: 31 CVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLV 90
C D +A R + S+L I + + G+ + +++ S+NS RWL+
Sbjct: 43 CGDTLAIN---DLRGKNKEKYSYSELANLITKVSLSFKTYGLVKGDVVTVISENSPRWLI 99
Query: 91 ADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFI 150
ADQG++ GAIN VRG S S EL +I +HS+SV L V++ E + ++ E K +FI
Sbjct: 100 ADQGLMRLGAINAVRGINSPSVELEYIIDHSKSVGLIVQSKEVWLKLNEKEKLKKRFKFI 159
Query: 151 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 210
I L + D++ ++ E I +G K + ++N K + +DIA+
Sbjct: 160 INL---EDEQFEDLI------NWQEFIKVGD---KGYFENNSFEK----DNNQINDIASI 203
Query: 211 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 270
+YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+ YF FS
Sbjct: 204 LYTSGTTGKPKGVPLTHANFLHQIINLAYIADPETGTSVLSVLPIWHSYERSAEYFFFSC 263
Query: 271 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
G YT + LKDD+++ +P M +VP ++E ++ G + + ++ + LI+ S
Sbjct: 264 GCTQFYTNPKFLKDDIKKVKPVVMATVPRLWEAIHDGFFLALKKMNPKKQKTIKFLIKNS 323
Query: 331 FAYTAFKRIYEGF-CLTRNQKQPSYLVALI-----DWLWARIICAILWP---LHLLAEKL 381
+ FKR + NQ + LI + +I LWP L EKL
Sbjct: 324 ---SIFKRNLRKIRNIEINQVSSLAKICLIISVLGRFFLHKISSTFLWPSILKQLCGEKL 380
Query: 382 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR NV
Sbjct: 381 ------------KFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVR 428
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
GS G P+ TEIKIV+ E +++L G + V+G QVM+GY N SATK L +DGW +
Sbjct: 429 GSSGQPLAFTEIKIVNEEKDKILEFREVGKILVKGPQVMKGYLNNDSATKDVLSKDGWFD 488
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD+G++ P+ G LV+ GRAKDTIVLS+GEN+EP LE L S I Q+
Sbjct: 489 TGDLGFLIPN----------GSLVITGRAKDTIVLSSGENIEPNPLETQILSSEFINQVQ 538
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
++GQD++ A++VP+ E V + D S L+ K I L +
Sbjct: 539 LVGQDKKFLTALVVPNIELV-----KNKFFANDLSTLNSNKNIGLFF 580
>gi|91070346|gb|ABE11263.1| putative long-chain-fatty-acid--CoA ligase [uncultured
Prochlorococcus marinus clone HF10-88F10]
Length = 647
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 218/599 (36%), Positives = 320/599 (53%), Gaps = 46/599 (7%)
Query: 13 ILSSLDYHRHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGV 72
+ +LD+ + C D +A R F S+L I + + G+
Sbjct: 25 FIKTLDHIDQIWEKLKFKCGDTLAV---CDLRGKYKEKFSYSELADLITKVSFSFKNYGL 81
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPE 132
+ +++ S+NS RWLV DQG++ GAIN VRG S S EL +I HS SV L V++ E
Sbjct: 82 VKGDVVTIISENSPRWLVVDQGLMRLGAINAVRGINSPSVELDYIIKHSNSVGLIVQSKE 141
Query: 133 FFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSND 192
+ ++ K ++FII L + E + S+++ I R + K S +N+
Sbjct: 142 IWLKLDNKEELKKRLKFIINLEDE---------EFESLISWNKFI---RVAEKENSQNNN 189
Query: 193 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 252
+K DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+
Sbjct: 190 LQKF----NPKIDDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTSVLSV 245
Query: 253 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 312
LP WH YER+ YF FS G YT + LKDD+ + +P M +VP ++E ++ G + +
Sbjct: 246 LPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQAL 305
Query: 313 FTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAIL 371
++ + + LI S + FKR + NQ + L+ + +R
Sbjct: 306 KKMPFKKQKLIKFLISNS---SVFKRSLRKIRNIDINQITFKSKIPLLGSVISR------ 356
Query: 372 WPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
+PLH L+ ++ I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SP
Sbjct: 357 YPLHKLSTIFLWPNILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSP 416
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 489
V+ RR NV GS G P+ TEIKIV+ + ++L G + V+G QVM+GY N A
Sbjct: 417 VLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKKILKFREVGKILVKGPQVMKGYLNNELA 476
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
TK L +DGW +TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE
Sbjct: 477 TKDVLSKDGWFDTGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLET 526
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
L S I QI ++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 527 EILSSEFINQIQLVGQDKKCLTALVVPNLELV-----KNKFLEEDLSKLNLNKNIGTFF 580
>gi|387192078|gb|AFJ68636.1| long-chain acyl-CoA synthetase [Nannochloropsis gaditana CCMP526]
Length = 671
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 222/638 (34%), Positives = 346/638 (54%), Gaps = 78/638 (12%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L ++I A + G+KP + +S+F++NS RWL+ADQ +L GA N VRG ++ +EL
Sbjct: 41 ELNRQIGALAAFFQHEGLKPGQCVSVFAENSHRWLIADQAILKAGACNAVRGVKAPVDEL 100
Query: 115 LHIYNHSESVALAVENPEFFNRIAET---LCSK-AAMRFIILLW-GKKSSVAPDIVEEIP 169
+IY +SESVA VE+ E + T L + RFI++L+ G++S + +P
Sbjct: 101 QYIYQNSESVASVVESVEQIEALMRTNGGLTGRYGPPRFILVLFPGERSGQEIRELANLP 160
Query: 170 ----VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSD--DIATYVYTSGTTGNPKGV 223
V ++DE + S + + + D +AT VYTSGTT PKGV
Sbjct: 161 PPTQVLTFDEAL------------SASLARPLTFRPVPKDVRSVATLVYTSGTTNKPKGV 208
Query: 224 MLTHKNLLHQIR--SLYDIV---PAEN---GDKFLSMLPPWHVYERACGYFIFSRGIELM 275
+L H NLLHQ+ S D PA N GD +S+LP WH++ER Y++FS+GI ++
Sbjct: 209 VLRHSNLLHQVNYNSFTDSPSKEPAYNPVLGDVLVSVLPCWHIFERTAEYWMFSKGIHVV 268
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
Y+ V+N K DL ++QP ++++VP + ET+Y G+ ++ T A++ + R+ A+
Sbjct: 269 YSNVKNFKADLAKHQPQFIVAVPRLLETIYRGVLQKFATEKGAKKKIIEFFTRVGSAWVK 328
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 394
R+ G L P I+ L A ++ +L PL + +KLV+ K+++ +G K
Sbjct: 329 AWRVARGLVLRSRAPNP------IERLLALVLALVLSPLAAVGDKLVWSKVRAGLGGRIK 382
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
V+GG S+P+ ++ F+E + V VGYG+TE+SPVI R N+ GSVG TE+K
Sbjct: 383 VLVAGGSSMPLVLEDFFELLRTPVIVGYGMTETSPVITNRVAEKNLAGSVGRTARDTEVK 442
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
IVD E+ LP G G+V +RG Q+M GY N A+K LD++G+L+TGD+G I P
Sbjct: 443 IVDPESGARLPEGQPGLVLMRGPQMMAGYKSNAEASKAVLDQEGFLDTGDLGRIHPLTKH 502
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAI 573
L++ GRAKDTIVLS GENVEP +E+ S+L+ Q++ +GQD++ G +
Sbjct: 503 ---------LIITGRAKDTIVLSNGENVEPQPIEDVVCANSALVDQVMCVGQDEKVLGML 553
Query: 574 IVPDKE-----------------EVL--------MAAKRLSIVHADASELSKEKTISLLY 608
+VP+ E+L +A R + +AS K++ L
Sbjct: 554 VVPNVRALARAGLVDRGLAERVAELLGGQVLTNGIAGSRAELEEVEASLREKKEVKKALL 613
Query: 609 GELRKWTSKC---SFQIGPIHVVDEPFTV--NFLCLAL 641
++ + K + ++G + VV EPF + FL L
Sbjct: 614 ADIARAMGKSFRETERVGAVEVVLEPFNMANGFLTQTL 651
>gi|15639139|ref|NP_218585.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025379|ref|YP_001933151.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408502048|ref|YP_006869492.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|3322408|gb|AAC65132.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189017954|gb|ACD70572.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408475411|gb|AFU66176.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 656
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 302/575 (52%), Gaps = 46/575 (8%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F + S + + FA GL IG + + L SDN WL A G+ A GA +V RGS
Sbjct: 44 FEITSFSSFYEHVCLFAAGLASIGCGRGDCIGLISDNRVEWLHASFGIQALGAADVPRGS 103
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIV 165
++ +L+ I E+ + VEN ++A + ++ I+LL G ++ + V
Sbjct: 104 DATERDLVQILGAVEARTVIVENDAQLKKLARCFDALPSVSQIVLLDAGGAYQAMKDEFV 163
Query: 166 E-------EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
+ + F+Y +I+ G + F + R + D+AT ++TSGTTG
Sbjct: 164 QNEDGSARKCSFFTYQDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTG 219
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
PKGV+L+H+N L Q+ + + GD LS+LP WHV+ER Y + S + Y+
Sbjct: 220 TPKGVVLSHENFLCQLIDISRRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSK 279
Query: 279 VRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
+ DL + PH++ SVP ++E ++ GI K + + + AY F
Sbjct: 280 PVGSVMLADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYF 339
Query: 337 KRIYEGF--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
R G TR + + L A + WL +L PLH L LV++K++ G S
Sbjct: 340 YRSVFGLRTHTTRRAQFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKKFGTSF 392
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
K +SGGG+LP ++D F AIGV+V GYGLTE++PVIA R V GSVG P + E+
Sbjct: 393 KTAISGGGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEV 452
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
KIVD +T LP G KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+
Sbjct: 453 KIVD-DTGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY------ 505
Query: 514 RGRSRRC-GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
RC GG +VL GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A
Sbjct: 506 -----RCVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAA 560
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 607
+IVPD+ E+ + A+A EL E LL
Sbjct: 561 LIVPDEAELRL--------WAEAQELRTECMEELL 587
>gi|123967990|ref|YP_001008848.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
AS9601]
gi|123198100|gb|ABM69741.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. AS9601]
Length = 647
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 312/602 (51%), Gaps = 52/602 (8%)
Query: 13 ILSSLDYHRHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGV 72
+ +LD+ + C D +A R F S+L I + G+
Sbjct: 25 FIKNLDHIDQIWEELKFKCGDTLAV---CDLRGKYKEKFSYSELADLITKVSFSFEKYGL 81
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPE 132
K + +++ S+NS RWL DQG++ GAIN VRG S S EL +I HS SV L V++ E
Sbjct: 82 KKGDVVTVISENSPRWLAVDQGLMRLGAINAVRGINSPSVELDYIIKHSNSVGLIVQSKE 141
Query: 133 FFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSND 192
+ ++ K ++FII L ++ + S+ + I S + + N+
Sbjct: 142 IWLKLNNKEELKKRLKFIINLEDEQFE---------SLISWSKFIS----SVEKENSQNN 188
Query: 193 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 252
+ + E DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+
Sbjct: 189 NLEKFNPEI---DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTCVLSV 245
Query: 253 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 312
LP WH YER+ YF FS G YT + LKDD+ + +P M +VP ++E ++ G + +
Sbjct: 246 LPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQAL 305
Query: 313 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR---NQKQPSYLVALIDWLWARIICA 369
+ ++ + + LI S + R F + + K P + + ++
Sbjct: 306 KKMPSKKQKLIKFLISNSSVFKRSLRKIRNFDINKITFKSKIPLLGSVISRYPLHKLSTI 365
Query: 370 ILWP---LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
LWP L EKL K ++GGG+LP H+DLF+E++GV V VGYGLTE
Sbjct: 366 FLWPNILRQLCGEKL------------KFPINGGGALPEHVDLFFESLGVDVLVGYGLTE 413
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
+SPV+ RR NV GS G P+ TEIKIV+ + +L G + VRG QVM+GY N
Sbjct: 414 TSPVLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKNILKFREVGKILVRGPQVMKGYLNN 473
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
AT + L +DGW +TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP
Sbjct: 474 EIATNEVLSKDGWFDTGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNP 523
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 606
LE L S I QI ++GQD++ A++VP+ E V + + D S+L+ K I
Sbjct: 524 LETEILSSEFINQIQLVGQDKKCLTALVVPNVELV-----KSKFLEEDISKLNLNKNIGT 578
Query: 607 LY 608
+
Sbjct: 579 FF 580
>gi|378974784|ref|YP_005223392.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
gi|384421695|ref|YP_005631054.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059561|gb|ADD72296.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374680182|gb|AEZ60472.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
Length = 668
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 302/575 (52%), Gaps = 46/575 (8%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F + S + + FA GL IG + + L SDN WL A G+ A GA +V RGS
Sbjct: 56 FEITSFSSFYEHVCLFAAGLASIGCGRGDCIGLISDNRVEWLHASFGIQALGAADVPRGS 115
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIV 165
++ +L+ I E+ + VEN ++A + ++ I+LL G ++ + V
Sbjct: 116 DATERDLVQILGAVEARTVIVENDAQLKKLARCFDALPSVSQIVLLDAGGAYQAMKDEFV 175
Query: 166 E-------EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
+ + F+Y +I+ G + F + R + D+AT ++TSGTTG
Sbjct: 176 QNEDGSARKCSFFTYQDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTG 231
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
PKGV+L+H+N L Q+ + + GD LS+LP WHV+ER Y + S + Y+
Sbjct: 232 TPKGVVLSHENFLCQLIDISRRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSK 291
Query: 279 VRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
+ DL + PH++ SVP ++E ++ GI K + + + AY F
Sbjct: 292 PVGSVMLADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYF 351
Query: 337 KRIYEGF--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
R G TR + + L A + WL +L PLH L LV++K++ G S
Sbjct: 352 YRSVFGLRTHTTRRAQFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKKFGTSF 404
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
K +SGGG+LP ++D F AIGV+V GYGLTE++PVIA R V GSVG P + E+
Sbjct: 405 KTAISGGGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEV 464
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
KIVD +T LP G KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+
Sbjct: 465 KIVD-DTGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY------ 517
Query: 514 RGRSRRC-GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
RC GG +VL GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A
Sbjct: 518 -----RCVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAA 572
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 607
+IVPD+ E+ + A+A EL E LL
Sbjct: 573 LIVPDEAELRL--------WAEAQELRTECMEELL 599
>gi|126695760|ref|YP_001090646.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9301]
gi|126542803|gb|ABO17045.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9301]
Length = 647
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 217/599 (36%), Positives = 317/599 (52%), Gaps = 46/599 (7%)
Query: 13 ILSSLDYHRHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGV 72
+ +LD+ + C D +A R F S+L I + G+
Sbjct: 25 FIKNLDHIDQIWEKLKFKCADTLAV---CDLRGKYKEKFSYSELADLITKVSFSFENYGL 81
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPE 132
K + +++ S+NS RWL DQG++ GAIN VRG S S EL +I HS SV L V++ E
Sbjct: 82 KKGDVVTVISENSPRWLAVDQGLMRLGAINAVRGINSPSVELDYIIGHSNSVGLIVQSKE 141
Query: 133 FFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSND 192
+ ++ K ++FII L ++ + S+ I K S +N+
Sbjct: 142 IWLKLNNKEELKKRLKFIINLEDEQFE---------SLISWSTFIS---SVEKENSQNNN 189
Query: 193 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 252
K + E DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+
Sbjct: 190 LEK-FNPEI---DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTSVLSV 245
Query: 253 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 312
LP WH YER+ YF FS G YT + LKDD+ + +P M +VP ++E ++ G + +
Sbjct: 246 LPIWHSYERSAEYFFFSCGCTQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQAL 305
Query: 313 FTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAIL 371
+ ++ + + LI S + FKR + NQ + L+ + +R
Sbjct: 306 KKMPSKKQKLIKFLISNS---SVFKRSLRKIRNIDINQITFKSKIPLLGSVISR------ 356
Query: 372 WPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
+PLH L+ ++ I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SP
Sbjct: 357 YPLHKLSTIFLWPNILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSP 416
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 489
V+ RR NV GS G P++ TEIKIV+ + ++L G + VRG QVM+GY N A
Sbjct: 417 VLTCRRRELNVRGSSGQPLSFTEIKIVNDDKKKILKFREVGKILVRGPQVMRGYLNNEIA 476
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T L +DGW +TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE
Sbjct: 477 TNDVLSKDGWFDTGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLET 526
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
L S I QI ++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 527 EILSSEFINQIQLVGQDKKCLTALVVPNVELV-----KSKFLEEDLSKLNLNKKIGTFF 580
>gi|408794606|ref|ZP_11206211.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461841|gb|EKJ85571.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 624
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 314/557 (56%), Gaps = 39/557 (7%)
Query: 62 DFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHS 121
+ A L +G++P +++ L +DN W +AD L GAINV RGS S+ +E+ +I +HS
Sbjct: 47 NLALSLLQMGIQPGDRIGLMADNRTEWAIADIATLLNGAINVPRGSDSTPQEIEYILSHS 106
Query: 122 ESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR 181
ES VE+ + ++ + L + + IIL G +S ++ S + +I+ G
Sbjct: 107 ESKYCFVEHEKLYDSLKPILSNTKVEKVIILDPGFRS-------KDTLAVSMETLINEGE 159
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
RK N + + + DD+ T +YTSGTTG PKGVMLTH+N+++ + + V
Sbjct: 160 TLRK-----NLPSLELRSKQVKPDDLFTIIYTSGTTGMPKGVMLTHQNMVYNVVKVPPRV 214
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 301
++ D+ LS+LP WH++ERA Y I + G + YT +R+L+DD Q+ +P +M S P ++
Sbjct: 215 GLKSSDRTLSILPVWHIFERAIDYAIIAEGASIAYTNIRDLRDDFQKIKPSFMASAPRLW 274
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALID 360
E LY GI++++ + +R + FAY K+ +G L N+ Q
Sbjct: 275 ENLYQGIKQKLEKAPENKRKL------FDFAYDICKKFKDGQDYLAGNKLQTKEESPFER 328
Query: 361 WLWARIICAILWPLHLLA---EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGV 416
+ + L LL+ + LV+ KI+ +G G +SGGG+LP H+D F+ IG+
Sbjct: 329 AKNTAVSLGYVLNLFLLSKVLDGLVFSKIRDVLGGHLTGTISGGGALPAHVDEFFNVIGI 388
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
V GYG+TE +P+I+ R V GSVG T +K+V+ + E +P G GI+ ++G
Sbjct: 389 PVYEGYGMTECAPIISVRSVGNVVQGSVGKWPEGTIVKVVN-DQGESVPKGKMGIIHIKG 447
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
QVM+GY+KN AT +A+ +DGW+NTGD+G+I+ + + L + GR KDTIVL
Sbjct: 448 PQVMKGYYKNEEATSKAI-QDGWMNTGDLGFISFNDT----------LSVRGRVKDTIVL 496
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GENVEP+ +E L ++LI Q++V+GQDQ+ A+I PDKE + K + +
Sbjct: 497 LGGENVEPVPIENLLLENALINQVIVVGQDQKSLTALIWPDKERM----KEAGLNPKEGE 552
Query: 597 ELSKEKTISLLYGELRK 613
+L++ K I L Y + K
Sbjct: 553 DLNQNKEIRLYYQNIVK 569
>gi|254525931|ref|ZP_05137983.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
gi|221537355|gb|EEE39808.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
Length = 647
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 209/561 (37%), Positives = 304/561 (54%), Gaps = 43/561 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F S+L I + + G+ + +++ S+NS RWLVADQG++ GAIN VRG S
Sbjct: 60 FSYSELADLITKVSFSFKSYGLVKGDVVTVISENSPRWLVADQGLMRLGAINAVRGINSP 119
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
S EL +I HS SV L V++ + + ++ K ++FII L + E +
Sbjct: 120 SVELDYIIEHSNSVGLIVQSKDIWLKLNNKEELKKRLKFIINLEDE---------EFESL 170
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
S+++ + A N + DD+AT +YTSGTTG PKGV L+H N
Sbjct: 171 ISWNQFLS-------AVEKENSQDNIIEKFNPKIDDVATILYTSGTTGKPKGVPLSHANF 223
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+ + +
Sbjct: 224 LHQIINLAYIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIK 283
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQ 349
P M +VP ++E ++ G + + ++ + + LI S + FKR L NQ
Sbjct: 284 PVVMATVPRLWEAIHDGFFQALKKMPFKKQKLIKFLISNS---SVFKRSLRKIRNLDINQ 340
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHI 407
+ L+ +IC +PLH L+ ++ I + K ++GGG+LP H+
Sbjct: 341 ITFESKIPLL----GSVICR--YPLHKLSNIFLWPNILRQLCGEKLKFPINGGGALPEHV 394
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
DLF+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + ++L
Sbjct: 395 DLFFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKKILKFR 454
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G + VRG QVM+GY N ATK L +DGW +TGD+G++ P+ G L +
Sbjct: 455 EVGKILVRGPQVMKGYLNNEIATKDVLSKDGWFDTGDLGFLIPN----------GSLFIT 504
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAKDTIVLS+GEN+EP LE L S I QI ++GQD++ A++VP+ E V +
Sbjct: 505 GRAKDTIVLSSGENIEPNPLETEILSSEFINQIQLVGQDKKCLTALVVPNVELV-----K 559
Query: 588 LSIVHADASELSKEKTISLLY 608
+ D S+L+ K I +
Sbjct: 560 SKFLEEDLSKLNLNKNIGTFF 580
>gi|157412815|ref|YP_001483681.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
gi|157387390|gb|ABV50095.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
Length = 647
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 306/561 (54%), Gaps = 43/561 (7%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F S+L I + + G+ + +++ S+NS RWL+ADQG++ GAIN VRG S
Sbjct: 60 FSYSELADLITKVSFSFKSYGLVKGDVVTVISENSPRWLIADQGLMRLGAINAVRGINSP 119
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
S EL +I HS SV L V++ + + R+ K ++FII L + E +
Sbjct: 120 SVELEYIIEHSNSVGLIVQSKDIWLRLNNKQELKKRLKFIINLEDE---------EFENL 170
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
S+++ + A N + DD+AT +YTSGTTG PKGV L+H N
Sbjct: 171 ISWNQFLS-------AVEKENSQDNIIEKFNPKIDDVATILYTSGTTGKPKGVPLSHANF 223
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQI +L I E G LS+LP WH YER+ YF FS G YT + LKDD+ + +
Sbjct: 224 LHQIINLAYIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCSQYYTIPKFLKDDITQIK 283
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY-TAFKRIYEGFCLTRNQ 349
P M +VP ++E ++ G + + ++ + + LI S + ++ ++I L NQ
Sbjct: 284 PVVMATVPRLWEAIHDGFFQVLKKMPFKKQKLIKFLIGNSSVFKSSLRKIRN---LDINQ 340
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHI 407
+ L+ +IC +PLH L+ ++ I + K ++GGG+LP H+
Sbjct: 341 ITFKSKIPLL----GSVICR--YPLHKLSNIFLWPNILRQLCGEKLKFPINGGGALPEHV 394
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
DLF+E++GV V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + ++L
Sbjct: 395 DLFFESLGVDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNDDKKKILKFR 454
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G + VRG QVM+GY N ATK L +DGW +TGD+G++ P+ G L +
Sbjct: 455 EVGKILVRGPQVMKGYLNNEIATKDVLSKDGWFDTGDLGFLIPN----------GSLFIT 504
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAKDTIVLS+GEN+EP LE L S I QI ++GQD++ A++VP+ E V +
Sbjct: 505 GRAKDTIVLSSGENIEPNPLETEILSSEFINQIQLVGQDKKCLTALVVPNIELV-----K 559
Query: 588 LSIVHADASELSKEKTISLLY 608
+ D S+L+ K I +
Sbjct: 560 SKFLEEDLSKLNLNKNIGTFF 580
>gi|378972655|ref|YP_005221259.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378973722|ref|YP_005222328.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378981631|ref|YP_005229936.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374676978|gb|AEZ57271.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678048|gb|AEZ58340.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679117|gb|AEZ59408.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
Length = 668
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 213/569 (37%), Positives = 300/569 (52%), Gaps = 46/569 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S + + FA GL IG + + L SDN WL A G+ A GA +V RGS ++ +
Sbjct: 62 SSFYEHVCLFAAGLASIGCGRGDCIGLISDNRVEWLHASFGIQALGAADVPRGSDATERD 121
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIVE----- 166
L+ I E+ + VEN ++A + ++ I+LL G ++ + V+
Sbjct: 122 LVQILGAVEARTVIVENDAQLKKLARCFDALPSVSQIVLLDAGGAYQAMKDEFVQNEDGS 181
Query: 167 --EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+ F+Y +I+ G + F + R + D+AT ++TSGTTG PKGV+
Sbjct: 182 ARKCSFFTYQDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTGTPKGVV 237
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--L 282
L+H+N L Q+ + + GD LS+LP WHV+ER Y + S + Y+ +
Sbjct: 238 LSHENFLCQLIDISRRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVM 297
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
DL + PH++ SVP ++E ++ GI K + + + AY F R G
Sbjct: 298 LADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFG 357
Query: 343 F--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
TR + + L A + WL +L PLH L LV++K++ G S K +SG
Sbjct: 358 LRTHTTRRAQFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKKFGTSFKTAISG 410
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
GG+LP ++D F AIGV+V GYGLTE++PVIA R V GSVG P + E+KIVD +
Sbjct: 411 GGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-D 469
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
T LP G KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+ R
Sbjct: 470 TGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY-----------R 518
Query: 520 C-GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
C GG +VL GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A+IVPD+
Sbjct: 519 CVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDE 578
Query: 579 EEVLMAAKRLSIVHADASELSKEKTISLL 607
E+ + A+A EL E LL
Sbjct: 579 AELRL--------WAEAQELRTECMEELL 599
>gi|78778783|ref|YP_396895.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9312]
gi|78712282|gb|ABB49459.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9312]
Length = 647
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 307/564 (54%), Gaps = 49/564 (8%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSS 110
F S+L I + + G+ + ++L S+NS RWL+ADQG++ GAIN VRG S
Sbjct: 60 FSYSELADLITKASFSFKNYGLVKGDVVTLISENSPRWLIADQGLMRLGAINAVRGINSP 119
Query: 111 SEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV 170
S EL +I HS SV L V++ E + ++ + K ++FII L ++ +
Sbjct: 120 SIELDYILEHSNSVGLIVQSKETWLKLNKKEELKKRLKFIINLEDEQFE---------SL 170
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
S+ + I E K +S + K + DD+AT +YTSGTTG PKGV LTH N
Sbjct: 171 ISWSQFIS---EGEKEYSQNKITEKC----NLSIDDVATILYTSGTTGKPKGVPLTHANF 223
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
LHQI +L I G LS+LP WH YER+ YF FS G YT + LKDD+ + +
Sbjct: 224 LHQIINLAHIADPGPGTSVLSVLPIWHSYERSAEYFFFSCGCTQYYTIPKFLKDDITQIK 283
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRI--YEGFCLTR 347
P M +VP ++E ++ G + + + ++ + + LI S + + ++I + F T
Sbjct: 284 PVVMATVPRLWEAIHDGFFQALKKMPSKKQKLIKFLISNSSVFKISLRKIRNLDIFQTTF 343
Query: 348 NQKQPSYLVALIDWLWARIICAILWP---LHLLAEKLVYKKIQSAIGISKAGVSGGGSLP 404
K P L + ++ LWP L EKL K ++GGG+LP
Sbjct: 344 IAKIPLLFSVLGRYPLHKLSSVFLWPNILRQLCGEKL------------KFPINGGGALP 391
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+DLF+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKIV+ + ++L
Sbjct: 392 EHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIVNEDKKKIL 451
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G + V+G QVM+GY N ATK L +DGW +TGD+G++ P+ G L
Sbjct: 452 KFREVGKILVKGPQVMKGYLNNDLATKDVLSKDGWFDTGDLGFLIPN----------GSL 501
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
+ GRAKDTIVLS+GEN+EP LE L S I Q+ ++GQD++ A++VP+ E V
Sbjct: 502 FITGRAKDTIVLSSGENIEPNPLETEILSSEFINQVQLVGQDKKCLTALVVPNVELV--- 558
Query: 585 AKRLSIVHADASELSKEKTISLLY 608
+ + D S+L+ K I + +
Sbjct: 559 --KNKFLEEDLSKLNLNKNIGIFF 580
>gi|33860959|ref|NP_892520.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639691|emb|CAE18861.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 641
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 307/564 (54%), Gaps = 55/564 (9%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L I + + G+ + ++L S+NS RWL+ADQG++ GAIN VRG S S E
Sbjct: 63 SELADLITKVSNSFKNYGLVKGDVVTLISENSPRWLIADQGLMRLGAINAVRGINSPSVE 122
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I HS SV L V++ E + ++ + K +FII L + D++ ++
Sbjct: 123 LEYIIEHSNSVGLIVQSKEVWLKLNKKNELKKRFKFIINL---EDEQFEDLI------NW 173
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
E I G E+ N++ + Y ++ +DIA+ +YTSGTTG PKGV LTH N LHQ
Sbjct: 174 PEFIKAGEENLL----KNNSFEKYNHQI---NDIASILYTSGTTGKPKGVPLTHANFLHQ 226
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
I +L +I E G LS+LP WH YER+ YF FS G YT + LKDD+++ +P
Sbjct: 227 IINLANIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCTQFYTNPKFLKDDIKQVKPVV 286
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQ--- 349
M +VP ++E ++ G + + + + FKR L NQ
Sbjct: 287 MATVPRLWEAIHDGF---FLALKKMPPKKQKIIKILIKNSSIFKRNLRKIRNLEINQVSS 343
Query: 350 -KQPSYLVALIDWLWA-RIICAILWP---LHLLAEKLVYKKIQSAIGISKAGVSGGGSLP 404
+ S +++I + +I LWP L EKL K ++GGG+LP
Sbjct: 344 LAKISLTISVIGRFFIHKISSTFLWPSILKQLCGEKL------------KFPINGGGALP 391
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+DLF+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKI++ E +++L
Sbjct: 392 EHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIMNEEKDKIL 451
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G + V+G QVM+GY N SATK L +DGW +TGD+G++ P+ G L
Sbjct: 452 KFKEIGKILVKGPQVMKGYLNNISATKDVLSKDGWFDTGDLGFLIPN----------GSL 501
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
V+ GRAKDTIVLS+GEN+EP LE L S I Q+ ++GQD++ A++ P+ E V
Sbjct: 502 VITGRAKDTIVLSSGENIEPNPLETEILSSEFINQVQLVGQDKKCLTALVAPNIELV--- 558
Query: 585 AKRLSIVHADASELSKEKTISLLY 608
D S+L+ K I L +
Sbjct: 559 --ENKFFENDISKLNSNKKIGLFF 580
>gi|338706124|ref|YP_004672892.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
gi|335344185|gb|AEH40101.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
Length = 668
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 297/560 (53%), Gaps = 46/560 (8%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
FA GL IG + + L SDN WL A G+ A GA +V RGS ++ +L+ I E
Sbjct: 71 FAAGLASIGCGRGDCIGLISDNRVEWLHASFGIQALGAADVPRGSDATERDLVQILGAVE 130
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIVE-------EIPVFSY 173
+ + VEN ++A + ++ I+LL G ++ + V+ + F+Y
Sbjct: 131 ARTVIVENDAQLKKLARCFDALPSVSQIVLLDAGGAYQAMKDEFVQNEDGSARKCSFFTY 190
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+I+ G + F + R + D+AT ++TSGTTG PKGV+L+H+N L Q
Sbjct: 191 QDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTGTPKGVVLSHENFLCQ 246
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQP 291
+ + + GD LS+LP WHV+ER Y + S + Y+ + DL + P
Sbjct: 247 LIDISHRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAKLNP 306
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLTRNQ 349
H++ SVP ++E ++ GI K + + + AY F R G TR
Sbjct: 307 HFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTTRRA 366
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ + L A + WL +L PLH L LV++K++ G S K +SGGG+LP ++D
Sbjct: 367 QFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKEFGTSFKTAISGGGALPPNVD 419
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F AIGV+V GYGLTE++PVIA R V GSVG P + E+KIVD +T LP G
Sbjct: 420 EFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLPVGY 478
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVLVLE 527
KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+ RC GG +VL
Sbjct: 479 KGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQIVLR 527
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ +
Sbjct: 528 GRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL---- 583
Query: 588 LSIVHADASELSKEKTISLL 607
A+A EL E LL
Sbjct: 584 ----WAEAQELRTECMEELL 599
>gi|194477166|ref|YP_002049345.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
gi|171192173|gb|ACB43135.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
Length = 645
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 329/599 (54%), Gaps = 51/599 (8%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+S ++ S+L + I + G+K + ++LF++NS RWLV DQG++ GA
Sbjct: 63 VSPHTYKSEKLSYSQLSERIEQASAAFIRFGIKDGDVVTLFAENSPRWLVIDQGLMRAGA 122
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
+ VRG + SEEL I S S+AL V++ I + L +A++ F+++L G+ S
Sbjct: 123 ADAVRGIAAPSEELEFIIKDSGSIALIVQSAN----ILKHLELEASLLFVLILEGEAPS- 177
Query: 161 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++E I G +++ S ND+R+ +AT +YTSGTT P
Sbjct: 178 --------NTIGWEEFISYGAKTQALPSFYNDSRR-----------LATLIYTSGTTSKP 218
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV LTH NLLHQIR+L +V + + LS+LP WH YER+ YF+ S G YT ++
Sbjct: 219 KGVALTHSNLLHQIRTLRVVVEPHSNENTLSILPIWHAYERSIEYFLLSCGCCQNYTNLK 278
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
L+ DLQ +P Y++SVP +++ L G + + + + R +++S + R
Sbjct: 279 KLRKDLQHIKPIYLVSVPRLWQALMEGFEDNLSNLPSHVNYLIRVFLKLSRYNRSRWRFA 338
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIG-ISKAGVS 398
+ + + +L A I I WP H+LA ++ K+ Q +G + +
Sbjct: 339 QNLSIQPVCNKARFL--------AGIEVLITWPSHVLASITIWPKVRQQLVGDLLTTAIC 390
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GGG+L +ID F+EAIG+++ VGYGLTE+SPV+ RR + N+ S G P+ T+++I+D+
Sbjct: 391 GGGALGAYIDSFFEAIGIELLVGYGLTETSPVLTCRRRSANIRESAGRPLPLTDLRIIDS 450
Query: 459 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 518
+ L G KG + RG QVM+GY++ + L+ + W +TGD+G++ P
Sbjct: 451 SSARPLGWGEKGRILARGPQVMKGYYRESDSNMTILNGESWFDTGDLGYLLPD------- 503
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
G L+L GRAK+TIVL+ GEN+EP+ LE S L+ QI++IGQDQR+ A+IVP
Sbjct: 504 ---GSLILTGRAKETIVLNNGENIEPVVLEVTLSASPLVEQIILIGQDQRQLAALIVPCF 560
Query: 579 EEVLMAAKRLSIVHADASELS---KEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 634
E + + +I++ D + KE+ +L G + S+ + ++ I +V EPF++
Sbjct: 561 EAIGNLMQVRNILNNDLPLIMNAIKEELNRILAGRI---GSRLNERLAGIALV-EPFSI 615
>gi|307718544|ref|YP_003874076.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
gi|306532269|gb|ADN01803.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
Length = 636
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/553 (34%), Positives = 311/553 (56%), Gaps = 32/553 (5%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
++ + A GL+ +G++ E + L SDN W+ D +L+ GA++V RGS S++EE+ +I
Sbjct: 46 KVKETAAGLKEMGIERGEHVGLISDNRWEWITLDMALLSLGAVDVPRGSDSTAEEIAYIL 105
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
+H+E + +ENP +++ + +IL+ G+ ++ E + ++ E+
Sbjct: 106 SHAECRRVIIENPALAHKVFSRKEKLGGVSQVILIEGEPEQC--ELPEGVACTTFAELAA 163
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
G+E + D + + DD+AT +YTSGTTG PKGVML H++ + QI L
Sbjct: 164 RGKEVLAQDPEMVDR----EIDQGTGDDLATIIYTSGTTGEPKGVMLPHRSFIFQIDKLK 219
Query: 239 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMIS 296
+ E GD FLS+LP WH +ERA Y + RG + Y+ + L +D+ + +P ++ +
Sbjct: 220 KPLNVEVGDIFLSILPIWHSFERAVDYILMERGGAVAYSKPVGKILLEDMTKVRPQWLAA 279
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC---LTRNQKQPS 353
VP V+E + + + + + A RV+ + + Y F ++ G L RN+
Sbjct: 280 VPRVFEGIRNAVYRNVNKGPAVSRVLFHFFVGVGELYAYFSNMFRGLLPDFLPRNR---- 335
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
++D + A + A+L P L E LV++K+++ +G K GVSGGG+LP H+D F++
Sbjct: 336 ----ILDKVVAFVPLALLAPFRGLGEVLVFRKLKAKLGGRFKTGVSGGGALPPHVDTFFQ 391
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
A+G++V GYGLTE+ PV+A R ++G+VG ++ E K++D N LP G KG++
Sbjct: 392 AVGIQVLEGYGLTETGPVLAVRDQKAPMVGTVGPLLDEVEYKVLDEHGNP-LPPGHKGVL 450
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+ QVM GY+K P AT + L +DGWLNTGD+ + GR + GRAKD
Sbjct: 451 WVKSPQVMLGYYKRPEATAEVL-KDGWLNTGDL----VRFTHGRE------FAIVGRAKD 499
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL GENVEP +EE S I VV+GQDQ+ GA+IVP++E + A+ + +
Sbjct: 500 TIVLRGGENVEPGPIEEKLKESEFIENAVVVGQDQKFLGALIVPNRERIEEYAREKGLSY 559
Query: 593 ADASELSKEKTIS 605
+ +L ++ +
Sbjct: 560 MEYEDLVEQAEVQ 572
>gi|386347051|ref|YP_006045300.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412018|gb|AEJ61583.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 636
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/548 (34%), Positives = 304/548 (55%), Gaps = 32/548 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL+ +G++ E + L SDN W+ D +L+ GA++V RGS S++EE+ +I +H+E
Sbjct: 51 AAGLKDMGIERGEHVGLISDNRWEWITLDMALLSLGAVDVPRGSDSTAEEIAYILSHAEC 110
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ +E P+ ++ + +IL+ G ++ E + ++ E+ RE
Sbjct: 111 TRVIIEKPDLVKKVFSRKEQLGGLSQVILIEGTPEEC--ELPEGVACTTFGEL----REK 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
KA + + + DD+AT +YTSGTTG PKGVML H++ + QI L +
Sbjct: 165 GKALLSQDPQLIDREIDQGTGDDLATIIYTSGTTGEPKGVMLPHRSFIFQIDKLKKPLDV 224
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVY 301
E GD FLS+LP WH +ERA Y + RG + Y+ + L +D+ + P ++ +VP V+
Sbjct: 225 EVGDIFLSILPIWHSFERAVDYVLMERGGAVAYSKPVGKILLEDMAKVSPQWLAAVPRVF 284
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC---LTRNQKQPSYLVAL 358
E + + + + + A RV+ + + Y F ++ G L RN+ +
Sbjct: 285 EGIRNAVYRNVNKGPAVSRVLFHFFVGVGQLYAYFSNMFRGLLPDFLPRNR--------I 336
Query: 359 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 417
+D + A + +L P L E LV++K+++ +G K GVSGGG+LP H+D F++A+G++
Sbjct: 337 LDKVVAFLPLVLLAPFRGLGEVLVFRKLKAKLGGRFKTGVSGGGALPPHVDTFFQAVGIQ 396
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
V GYGLTE+ PV+A R ++G+VG ++ E K+V E + LP G KG++ V+
Sbjct: 397 VLEGYGLTETGPVLAVRNQKAPMVGTVGPLLDEVEYKVV-GEHGDPLPPGHKGVLWVKSP 455
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
QVM GY+K P AT + L +DGWLNTGD+ + GR + GRAKDTIVL
Sbjct: 456 QVMLGYYKRPEATAEVL-KDGWLNTGDL----VRFTHGRE------FAIVGRAKDTIVLR 504
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GENVEP +EE S I +V+GQDQ+ GA+IVP++E + A+ + + + +
Sbjct: 505 GGENVEPGPIEEKLKESEFIENAMVVGQDQKFLGALIVPNRERIEEYAREKGLTYMEYED 564
Query: 598 LSKEKTIS 605
L ++ +
Sbjct: 565 LVEQAEVQ 572
>gi|392401663|ref|YP_006438275.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609617|gb|AFM10769.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 625
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 316/546 (57%), Gaps = 32/546 (5%)
Query: 62 DFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHS 121
+FA L +GV +++ +DN W+++D +L TGA NV RG+ + +E+ +I +H+
Sbjct: 46 NFAISLIDMGVAAGDRIGFLADNRVEWIISDIAVLLTGAANVPRGTDVTVDEIKYIMSHA 105
Query: 122 ESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR 181
E VEN ++ +++ ++ II+L K S A +I+ + ++ G
Sbjct: 106 ECKICIVENEATLKKL-QSVIKDTGVQTIIVLDPKYKSDAENIL------TLQNLLAKGA 158
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
+R + A + + + SDD+ T +YTSGTTG PKGVML+H N+++ I + +
Sbjct: 159 AAR----EEKLAGLKERCDAVKSDDLFTIIYTSGTTGLPKGVMLSHGNMVYNINEVPKAI 214
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 301
D LS+LP WH++ERA Y ++GI L YT VR+++DD + +P +M S P ++
Sbjct: 215 GLRPDDSMLSLLPVWHIFERAVDYGAIAKGIPLYYTNVRDVRDDFAKVKPTFMPSAPRLW 274
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E+LY GI ++I S AR+V+ RIS Y K+ + +QP +
Sbjct: 275 ESLYQGIMQRIEKSEPARKVMFETAYRISKEY---KKAVDYLAGNELMQQPESDADRLSR 331
Query: 362 LWARIICAI-LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
+ + A L+ LA+++V+ KI+ A+G + +SGGG+LP H+D F+ IG+ V
Sbjct: 332 TASSLFTAASLYIPARLADRVVFSKIREAMGGRFRGSISGGGALPAHVDEFFNVIGIPVY 391
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE +P+I+ R + GSVG N TE+ I++ + E + G KG++ VRG QV
Sbjct: 392 EGYGMTECAPIISVRTEGKIIQGSVGFVPNGTEVAILN-DKGERVRTGEKGVIHVRGPQV 450
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GY+KNP AT++ +++DGWLNTGDIG+ + +++ L + GRAK+TIVL G
Sbjct: 451 MKGYYKNPEATEKTINKDGWLNTGDIGFFSFNNT----------LSIRGRAKETIVLLGG 500
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASEL 598
ENVEP+ +E L + I QI+V+GQD++ A++ P+ E+V K ++ + AD S+L
Sbjct: 501 ENVEPVPIENKLLEDAQINQIIVVGQDKKTLTALVWPNLEKV----KEVAGISADPKSDL 556
Query: 599 SKEKTI 604
+ K +
Sbjct: 557 NANKEL 562
>gi|343127895|ref|YP_004777826.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222583|gb|AEL18761.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 645
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 329/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G I+V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCIDVPRGNDSSEDELTYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKMGNITVFSYKKLLELGAEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A + D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKAFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P +ISVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S +++V ++I Y K + G L+ K+ S ++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKLVFGGFLKIGIVYAKLKERFLG--LSPIYKKTSLFISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ + +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFIFVGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + N VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGFDGN-VLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MNGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PF++
Sbjct: 568 ANEDVNKLYSKHISDTINTKVGFKNFEKIAGFVLLQDPFSI 608
>gi|216264227|ref|ZP_03436219.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215980700|gb|EEC21507.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 645
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 329/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNITVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKTKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|221218169|ref|ZP_03589635.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226321899|ref|ZP_03797425.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|221192117|gb|EEE18338.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226233088|gb|EEH31841.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 645
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 329/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNISVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|218249826|ref|YP_002375101.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|218165014|gb|ACK75075.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
Length = 645
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 329/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNISVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQVIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|15594938|ref|NP_212727.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941726|ref|ZP_03087108.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|223888827|ref|ZP_03623418.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225549652|ref|ZP_03770618.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|387826230|ref|YP_005805683.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|2688524|gb|AAC66957.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|223885643|gb|EEF56742.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225369929|gb|EEG99376.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|312147979|gb|ADQ30638.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 645
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 329/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNITVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|225552232|ref|ZP_03773172.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225371230|gb|EEH00660.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 645
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 328/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELTYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNITVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P +ISVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRFKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKVKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|183221027|ref|YP_001839023.1| putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911121|ref|YP_001962676.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775797|gb|ABZ94098.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779449|gb|ABZ97747.1| Putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 644
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/596 (33%), Positives = 322/596 (54%), Gaps = 47/596 (7%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
++ AE L +GV +E ++L +DN W+V+D G+L +GA +V RG+ + E+++I NH
Sbjct: 44 INLAEALIDLGVSAKENVALLADNRLEWIVSDYGILMSGAADVPRGTDITDSEIVYILNH 103
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
E+ + +EN + + + + +I++ K ++ V ++I+ G
Sbjct: 104 CEAKVVFLENDKMLEKFQKNRSQLEFAKTLIVMDKKSTATG--------VLKLYDLIEKG 155
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYD 239
+E R S + R + I DD+ T +YTSGTTG PKGVML H N++HQ + L
Sbjct: 156 KELRAKGSKKAEER----MKAILPDDLFTIIYTSGTTGMPKGVMLKHSNMIHQTTAILGS 211
Query: 240 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 299
++ + ++ LS+LP WHV+ER Y + G YT VR+L+DD+++ +P +M S P
Sbjct: 212 MIDIKADERMLSILPVWHVFERVFEYLAIAAGCATYYTNVRDLRDDMKKAKPTFMASAPR 271
Query: 300 VYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
++E++Y+GI +I + A RR + S + A R +G + + P +V
Sbjct: 272 LWESIYNGIYTRINDPKQTPAIRRGLFNLAYFFSKHFNASMRFLKGNQVDYVGRNP--IV 329
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 415
+L ++ + +L + L + +V KI+ A G KA VSGGG+L H+D F+ IG
Sbjct: 330 SLFKGVYYLTVAIVLAVPYFLLDLVVLSKIREATGGELKASVSGGGALQRHVDAFFNDIG 389
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD--------AETNEVLPAG 467
+ V GYG+TE+SPVI+ R V GSVG T ++I D + N L +G
Sbjct: 390 INVLEGYGMTETSPVISVRTFKKLVQGSVGVITPETSVQIRDDLGKVLTHVDANNQLVSG 449
Query: 468 ---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
+G++ +RG QVM+GY+KNP T + L +DGW++TGDIG + L
Sbjct: 450 KYGQRGVIHIRGPQVMKGYYKNPETTAKVL-KDGWMDTGDIGMFNFKKT----------L 498
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
+ GRAKDT+VL GENVEP+ +E+ S I Q +VIGQDQ+ GAI++PD ++++
Sbjct: 499 TITGRAKDTVVLLGGENVEPVPIEDKLTESPFISQCMVIGQDQKNLGAIVIPDFDQLMAW 558
Query: 585 AKRLSIVHADASEL-SKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFTV 634
AK I D +L K + E++ +K F Q+ P ++ +PF V
Sbjct: 559 AKENGISETDKQKLIENPKVLDFYKKEIKALNNTKTGFKSFEQVTPFILITKPFEV 614
>gi|224533578|ref|ZP_03674167.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225548723|ref|ZP_03769770.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|224513251|gb|EEF83613.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225370753|gb|EEH00189.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 645
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 328/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNITVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNAFGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|224532749|ref|ZP_03673366.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512367|gb|EEF82751.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 645
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 329/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNITVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSISDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|51598846|ref|YP_073034.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51573417|gb|AAU07442.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 645
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 304/524 (58%), Gaps = 24/524 (4%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIAALGLGCVDVPRGNDSSEDELTYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
NHSES + VEN + ++ +++I+++ KS + + I VFSY +++
Sbjct: 102 INHSESTFIFVENNKQLQKVLSKKHDLRLVKYIVVIDDDKS--YEEKMGTITVFSYKKLL 159
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+LG E +A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ L
Sbjct: 160 ELGAEHLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRL 215
Query: 238 YDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYM 294
YD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L D P +
Sbjct: 216 YDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLLLNPQMI 275
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++E + GI K++ + S +++V ++I Y + GF ++P+
Sbjct: 276 ISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFSPV--YRKPNL 332
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A
Sbjct: 333 FISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKA 392
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+KV GYGLTE+ PV++ RR V +VG + E K+V + +VLP G KG +
Sbjct: 393 IGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYGEKGELW 451
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDT
Sbjct: 452 VKSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDT 501
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
IVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 502 IVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|226320819|ref|ZP_03796372.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233761|gb|EEH32489.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 645
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 328/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNISVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VLP G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+I P+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIAPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|408671205|ref|YP_006871276.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407241027|gb|AFT83910.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 645
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 306/527 (58%), Gaps = 30/527 (5%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIATLGLGCVDVPRGNDSSEDELTYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRF---IILLWGKKSSVAPDIVEEIPVFSYD 174
NHSES + VEN + ++ + L K +R I+++ KS + + I VFSY
Sbjct: 102 INHSESTFIFVENNK---QLQKVLSKKHDLRLVKCIVVIDDDKS--YEEKMGTITVFSYK 156
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+
Sbjct: 157 KLLELGAEYLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQL 212
Query: 235 RSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQP 291
LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L D P
Sbjct: 213 DRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLLLNP 272
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+ISVP ++E + GI K++ + S +++V ++I Y + GF K+
Sbjct: 273 QMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFSPV--YKK 329
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F
Sbjct: 330 PNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYF 389
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++A+G+KV GYGLTE+ PV++ RR V +VG + E K+V + +VLP G KG
Sbjct: 390 FKAVGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYGEKG 448
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+
Sbjct: 449 ELWVKSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE----------ISIVGRS 498
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 499 KDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|225619495|ref|YP_002720752.1| Long-chain acyl-CoA synthetase [Brachyspira hyodysenteriae WA1]
gi|225214314|gb|ACN83048.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hyodysenteriae WA1]
Length = 625
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 213/605 (35%), Positives = 323/605 (53%), Gaps = 51/605 (8%)
Query: 43 RRNHRFRV-FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
R N+ +V KL ++ A+ V G+ ++ +++FS+N W ++D +LA G+
Sbjct: 27 RDNNEEKVTITYKKLYDKVNAIAKAFDVKGLS-KKHVAIFSENRIEWFISDMALLALGSA 85
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
+V RG S+S+EL +I HSES A+ VEN F +I + + I+ L K
Sbjct: 86 DVPRGIDSTSDELNYIIEHSESEAVLVENEYVFKKIEK---HHKDLSLIVFLDSSKHD-- 140
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
PD ++S+++ ++LG ES D A K K + ++ IAT +YTSGTTG PK
Sbjct: 141 PDN----NIYSFEKFLELGEESLNG--DEEFAIK--KASKLTNESIATIIYTSGTTGKPK 192
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GV+LTH N+LH +R L DI+ G+K L++LP WH+YER Y G T R
Sbjct: 193 GVILTHGNILHNVRVLPDIIKLHPGEKLLTILPIWHIYERTISYVTAVTGCFTAITNKRY 252
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
LK+D +P ISVP ++ +Y+ + K I SA R +A+ I+ S Y R
Sbjct: 253 LKNDFTEEKPDIFISVPAIWVNIYNTVMKNIDRKSAFTRNLAKFFIKRSIKYIRSLRFQN 312
Query: 342 GFCL-----TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 395
+N K+ Y + + D ++ H +A K+VY KI+ G +
Sbjct: 313 DLIYLLGDENKNDKKAEYSIGMFDPIY-----------HKMATKMVYSKIRELTGGKMRL 361
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
+SGGG+LPM+I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I++
Sbjct: 362 TISGGGALPMYIEDFIEAVGINLIVGWGITETSPVVTLRSPYKNYRGTCGTPIPEVKIEV 421
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
D E N + G G+ ++G + + Y+K+P TKQA DG+ N+GD+G
Sbjct: 422 RDKEGN-ICKDGVMGVCYIKGPNIFKEYYKDPELTKQA-KIDGFFNSGDLGTYTQQ---- 475
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G +VL GRAK+TIVL TGENVEP +E AL S I QI+++GQD+ GAIIV
Sbjct: 476 ------GEIVLTGRAKETIVLLTGENVEPQPIENKALESPYISQIMLVGQDKASTGAIIV 529
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWTS-KCSFQ----IGPIHVVD 629
+KE + + I H D + L+ K + L+ EL + + F+ I + + D
Sbjct: 530 INKENIKEHFDKQKI-HYDENTLASSKDVYKLMREELDNLINYRNGFRPYEAIAKMIITD 588
Query: 630 EPFTV 634
E FT+
Sbjct: 589 EEFTI 593
>gi|332298944|ref|YP_004440866.1| o-succinylbenzoate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332182047|gb|AEE17735.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 635
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 214/587 (36%), Positives = 319/587 (54%), Gaps = 34/587 (5%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+ ILDFA GL +GV+ + + L +DN WL AD G++A GAI+V RG ++ ++L I
Sbjct: 41 RNILDFAGGLLSLGVRRGDHVGLIADNRKEWLQADMGIMAIGAIDVPRGCDATEKDLRFI 100
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE-EIPVFSYDEI 176
+ ++ + EN +I + +I L + E I + S+D++
Sbjct: 101 LSVTDCQTIIGENSAQLRKIIGLKADLPSFSRLICLEPLSDADKKLAAEASIELLSFDDV 160
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
G+ R A + +A + E DD+A ++TSGTTG PKGVMLTH N L Q+
Sbjct: 161 AAAGKAFRAAEPGAVEA----ELEAGQRDDLACIIFTSGTTGEPKGVMLTHGNFLTQLDE 216
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYM 294
L + + GDK L +LP WH ++R C Y I + L Y+ L D Q+ P +
Sbjct: 217 LQERIYLYPGDKALCVLPVWHAFQRLCEYVILCQAAALCYSKPVGSILLADFQKLNPQLL 276
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF-KRIYEGFCLTRNQKQ-P 352
+VP V+E++Y G+ + + + A + R + ++ +R++ N P
Sbjct: 277 PAVPRVFESVYEGVFRLMRKTGGAVYALFRFFTAAAILHSKIDRRLFRKTARFGNDFLIP 336
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
S++V ++ WL +L+P+ LL LV+KKI++ +G S + GVSGGG+LP ID F+
Sbjct: 337 SWIVLVLPWL-------LLYPIKLLGGVLVFKKIRAKLGNSFRGGVSGGGALPPQIDEFF 389
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
AIGV + GYGLTE++PV++ R V G+VG I E++IVDA+ N VLPAG KG+
Sbjct: 390 WAIGVNIVEGYGLTETAPVVSVRPLRKPVFGTVGSAIRGVEVRIVDAQGN-VLPAGKKGV 448
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V+VRG VM+GY++ T + + GW +TGDIG + G +VL GR K
Sbjct: 449 VQVRGGTVMKGYYRRDDLTANVMRDGGWFDTGDIGMLT----------VDGEIVLRGRMK 498
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
DTIVL GENVEPL +E S I Q VVIGQDQR GA+IVP +E+V A I
Sbjct: 499 DTIVLRGGENVEPLPIEMRLNESRYIAQSVVIGQDQRYLGALIVPSQEDVTAFADENCIR 558
Query: 592 HAD-ASELSKEKTISLLYGELR-KWTSKCSF----QIGPIHVVDEPF 632
+ D S L +++ I L E++ +K F +IG ++ +PF
Sbjct: 559 YTDYQSLLKQDEIIKLFDSEIQGAINAKNGFKLFEKIGRFALLAKPF 605
>gi|386853996|ref|YP_006203281.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365194030|gb|AEW68928.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 645
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 306/527 (58%), Gaps = 30/527 (5%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIATLGLGCVDVPRGNDSSEDELTYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRF---IILLWGKKSSVAPDIVEEIPVFSYD 174
NHSES + VEN + ++ + L K +R I+++ KS + + I VFSY
Sbjct: 102 INHSESTFIFVENNK---QLQKVLSKKHDLRLVNCIVVIDDDKS--YEEKMGTITVFSYK 156
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+
Sbjct: 157 KLLELGAEHLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQL 212
Query: 235 RSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQP 291
LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L D P
Sbjct: 213 DRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLLLNP 272
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+ISVP ++E + GI K++ + S +++V ++I Y + GF K+
Sbjct: 273 QMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFSPV--YKK 329
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F
Sbjct: 330 PNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYF 389
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++A+G+KV GYGLTE+ PV++ RR V +VG + E K+V + +VLP G KG
Sbjct: 390 FKAVGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYGEKG 448
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+
Sbjct: 449 ELWVKSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE----------ISIVGRS 498
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 499 KDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|183221263|ref|YP_001839259.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911354|ref|YP_001962909.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776030|gb|ABZ94331.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779685|gb|ABZ97983.1| Long-chain acyl-CoA synthetase, AMP-forming [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 624
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 199/575 (34%), Positives = 325/575 (56%), Gaps = 41/575 (7%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
+N + R F S + E + A L +G++P +++ L +DN W +AD L GA+NV
Sbjct: 31 KNFKGRTF--SDIFHEAENLALSLLQMGLQPGDRIGLMADNRTEWAIADIATLLNGAVNV 88
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
RGS S+++E+ +I +HSES VE+ + ++ + L + + IIL + P
Sbjct: 89 PRGSDSTAQEIEYILSHSESKYCFVEHEKLYDSLKPILSTTKVEKVIIL----DPTYVP- 143
Query: 164 IVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
++ V + ++ G RK N + + + DD+ T +YTSGTTG PKGV
Sbjct: 144 --KDSTVVNLQTLVRDGEALRK-----NLPSLELRSKQVKPDDLFTIIYTSGTTGMPKGV 196
Query: 224 MLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 283
MLTH+N+++ + + V ++ D+ LS+LP WH++ERA Y I + G + YT +R+L+
Sbjct: 197 MLTHQNMVYNVVKVPPRVGLKSTDRTLSILPVWHIFERAIDYAIITEGASIAYTNIRDLR 256
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
DD Q+ +P +M S P ++E LY GI++++ + ++ + FAY K+ +G
Sbjct: 257 DDFQKIKPSFMASAPRLWENLYLGIKQKLEKAPENKKKL------FDFAYDICKKFKDGQ 310
Query: 344 -CLTRNQ---KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VS 398
L N+ K+ S + + + L+ L L + LV+ KI+ +G G +S
Sbjct: 311 DYLAGNRLLTKEESPFERMKNTTVSIGYVLNLFLLAKLLDGLVFSKIRDVLGGHLTGTIS 370
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GGG+LP H+D F+ IG+ V GYG+TE +P+I+ R V GSVG T ++IV+
Sbjct: 371 GGGALPSHVDEFFNVIGIPVYEGYGMTECAPIISVRSVGHVVQGSVGKWPEGTAVRIVN- 429
Query: 459 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 518
E E +P G G++ ++G QVM+GY+KN ATK+A+ DGW+NTGD+G+I+ + +
Sbjct: 430 EQGESVPKGKMGVIHIKGPQVMKGYYKNEEATKKAI-VDGWMNTGDLGFISFNDT----- 483
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
L + GR KDTIVL GENVEP+ +E L ++LI Q++V+GQDQ+ A++ PDK
Sbjct: 484 -----LSVRGRVKDTIVLLGGENVEPVPIENLLLENALINQVIVVGQDQKSLTALVWPDK 538
Query: 579 EEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 613
E + K + + + +L++ K + L Y + K
Sbjct: 539 ERM----KEVGLQWKEGEDLNQNKDVRLYYQNIVK 569
>gi|216263481|ref|ZP_03435476.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
gi|215980325|gb|EEC21146.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
Length = 645
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/555 (35%), Positives = 310/555 (55%), Gaps = 24/555 (4%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRIASGLLHYGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
NHSES + VEN + ++ R I+++ KS + + I +FSY +++
Sbjct: 102 INHSESTFIFVENNKQLQKVLSKKHDLRLARCIVVIDDDKS--YEEKMGNITIFSYKKLL 159
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+LG E +A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ L
Sbjct: 160 ELGVEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRL 215
Query: 238 YDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYM 294
YD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D P +
Sbjct: 216 YDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFSLLNPQMI 275
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++E + GI K++ + S ++++ +RI Y K GF K+P+
Sbjct: 276 ISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFSPV--YKKPNL 332
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L ++D F++A
Sbjct: 333 FISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKA 392
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VL G KG +
Sbjct: 393 VGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-EKVLSYGEKGELW 451
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDT
Sbjct: 452 VRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDT 501
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A + +
Sbjct: 502 IVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFS 561
Query: 594 DASELSKEKTISLLY 608
+L + ++ LY
Sbjct: 562 SRGDLLANEDVNKLY 576
>gi|410679373|ref|YP_006931775.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536761|gb|AFU74892.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 651
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/555 (35%), Positives = 310/555 (55%), Gaps = 24/555 (4%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 48 NEVKRIASGLLHYGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYI 107
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
NHSES + VEN + ++ R I+++ KS + + I +FSY +++
Sbjct: 108 INHSESTFIFVENNKQLQKVLSKKHDLRLARCIVVIDDDKS--YEERMGNITIFSYKKLL 165
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+LG E +A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ L
Sbjct: 166 ELGAEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRL 221
Query: 238 YDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYM 294
YD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D P +
Sbjct: 222 YDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMI 281
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++E + GI K++ + S ++++ +RI Y K GF K+P+
Sbjct: 282 ISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFSPV--YKKPNL 338
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L ++D F++A
Sbjct: 339 FISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKA 398
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VL G KG +
Sbjct: 399 VGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-GKVLSYGEKGELW 457
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDT
Sbjct: 458 VRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDT 507
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A + +
Sbjct: 508 IVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFS 567
Query: 594 DASELSKEKTISLLY 608
+L + ++ LY
Sbjct: 568 SRGDLLANEDVNKLY 582
>gi|111115421|ref|YP_710039.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384207081|ref|YP_005592803.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890695|gb|ABH01863.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856965|gb|AEL69813.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 645
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/555 (35%), Positives = 310/555 (55%), Gaps = 24/555 (4%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRIASGLLHYGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
NHSES + VEN + ++ R I+++ KS + + I +FSY +++
Sbjct: 102 INHSESTFIFVENNKQLQKVLSKKHDLRLARCIVVIDDDKS--YEEKMGNITIFSYKKLL 159
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+LG E +A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ L
Sbjct: 160 ELGAEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRL 215
Query: 238 YDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYM 294
YD +P + G +S+LP WH +ERAC Y + +GI + Y+ L D P +
Sbjct: 216 YDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMI 275
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++E + GI K++ + S ++++ +RI Y K GF K+P+
Sbjct: 276 ISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFSPV--YKKPNL 332
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L ++D F++A
Sbjct: 333 FISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKA 392
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VL G KG +
Sbjct: 393 VGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-GKVLSYGEKGELW 451
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDT
Sbjct: 452 VRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDT 501
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A + +
Sbjct: 502 IVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFS 561
Query: 594 DASELSKEKTISLLY 608
+L + ++ LY
Sbjct: 562 SRGDLLANEDVNKLY 576
>gi|359689644|ref|ZP_09259645.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749983|ref|ZP_13306271.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
gi|418759344|ref|ZP_13315524.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113835|gb|EIE00100.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274868|gb|EJZ42186.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
Length = 679
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 214/644 (33%), Positives = 335/644 (52%), Gaps = 94/644 (14%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L + ++ AE L +G++ + ++L +DN W++AD G++ TGA +V RG+ + E
Sbjct: 37 SELYEAGVNLAEALIDLGIQSRDHVALLADNRVEWIIADYGIIMTGAADVPRGTDITDSE 96
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+++I +HSES + +EN + + ++ II++ K S AP +++ Y
Sbjct: 97 IVYIVSHSESEVVFIENDKMLEKFNRNKSQLGKVKTIIIM--DKESEAPGVLK-----MY 149
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
D I E K+ S + + I +D+ T +YTSGTTG PKGV L H N++HQ
Sbjct: 150 DLI-----EKGKSLRASGSRKVEDRVAAIKPEDLFTLIYTSGTTGLPKGVQLRHSNMMHQ 204
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+ ++ ++ K LS+LP WHV+ER Y S G YT VR+L+ DL +P +
Sbjct: 205 VLNVTPMLKINAEAKLLSILPVWHVFERVVEYVCISIGAATYYTNVRDLRQDLATVKPTF 264
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI-----------YEG 342
M S P ++E +Y+GI +I + + R L ++++ ++ K Y G
Sbjct: 265 MGSAPRLWENIYNGIYTRI-NDPSQTPAIRRGLFKLAYFFSDKKNAAVRFITGKEVDYHG 323
Query: 343 ----------------------FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA-- 378
F LT +YL+A ++ ++ PL+++A
Sbjct: 324 RNPIFSFFYGILMLFQLVLTGPFTLTVISSIAAYLLASTEF------SSLSLPLYIIAGL 377
Query: 379 ---------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 428
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+S
Sbjct: 378 GVFFNSATLDKIVLSKIRTATGGRLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETS 437
Query: 429 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRG 476
PV++ R ++GSVG + T ++I + + NEVL G KG+V V+G
Sbjct: 438 PVLSVRTFQKLIIGSVGSIVPKTNLQIRN-DNNEVLTEVDENGKVIKGRLGRKGVVFVKG 496
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
QVM+GYFKN AT +AL DGW+NTGD+G I H+ L L GRAKDT+VL
Sbjct: 497 PQVMKGYFKNDEATSKAL-VDGWMNTGDMGMINFKHT----------LTLTGRAKDTVVL 545
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GENVEP+ +E S+ I Q +VIGQDQ+ GAII+PD +++ AK + ++
Sbjct: 546 LGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIIIPDFDKLEEWAKENGVDTSNKD 605
Query: 597 EL-SKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFTV 634
L K + L E++ SK F Q+ P +V +PF V
Sbjct: 606 ALIENPKVVDLYRKEIKALNNSKNGFKSFEQVNPFFLVSKPFEV 649
>gi|219685238|ref|ZP_03540058.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219673334|gb|EED30353.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 645
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 318/558 (56%), Gaps = 30/558 (5%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIATLGLGCVDVPRGNDSSEDELAYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRF---IILLWGKKSSVAPDIVEEIPVFSYD 174
NHSES + VEN + ++ + L K +R I+++ KS + + I +FSY
Sbjct: 102 INHSESTFIFVENNK---QLQKVLSKKHDLRLVKCIVVIDDDKS--YEEKMGTIAIFSYK 156
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+
Sbjct: 157 KLLELGAEHLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQL 212
Query: 235 RSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQP 291
LYD +P + G +S+LP WH +ERAC Y + +G+ + Y+ L D P
Sbjct: 213 DRLYDYLPEIKPGKIMISILPLWHSFERACEYIVALKGVTIAYSKPIGPVLLKDFLLLNP 272
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+ISVP ++E + GI K++ + S +++V +++ Y + GF K+
Sbjct: 273 QMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKVGIIYAKLNEKFLGFSPV--YKK 329
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F
Sbjct: 330 PNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYF 389
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VLP G KG
Sbjct: 390 FKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYGEKG 448
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ VR Q+M GYFK+ + T + L EDGWL TGD+ + ++ + + GR+
Sbjct: 449 ELWVRSPQIMSGYFKDKAKTSEVLTEDGWLKTGDLVRLTINNE----------ISIVGRS 498
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A +
Sbjct: 499 KDTIVLRGGENIEPEPLERILGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSNGV 558
Query: 591 VHADASELSKEKTISLLY 608
+ S+L + ++ LY
Sbjct: 559 SFSSRSDLLVNEDVNKLY 576
>gi|224534678|ref|ZP_03675250.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224513926|gb|EEF84248.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 645
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/552 (35%), Positives = 314/552 (56%), Gaps = 30/552 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHYGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELTYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRF---IILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
+ VEN + ++ + L K +R I+++ KS + + I +FSY ++++LG
Sbjct: 108 TFIFVENNK---QLQKVLSKKHDLRLVKCIVVIDDDKS--YEEKMGNITIFSYKKLLELG 162
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
E + S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD
Sbjct: 163 AEYLRVNPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDY 218
Query: 241 VPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISV 297
+P + G +S+LP WH +ERAC Y + +GI + Y+ L D P +ISV
Sbjct: 219 LPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISV 278
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P ++E + GI K++ + S ++++ ++I Y K + GF K+P+ ++
Sbjct: 279 PRIWEGIRIGIIKKV-SESLIKKLMFGGFLKIGIVYAKLKEKFLGFSPV--YKKPNLFIS 335
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 416
L L+ + +++P+ LL + LV+KKI+ A+G + + GVSGGG+L ++D F++A+G+
Sbjct: 336 LFLKLFLFVGMILIFPVKLLGDILVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKAVGI 395
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
KV GYGLTE+ P+++ RR V +VG + E K+V + +VLP G KG + V+
Sbjct: 396 KVLEGYGLTETGPILSVRRFKGPVARTVGPILPDVEYKVVGID-GKVLPYGEKGELWVKS 454
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
QVM GYFK+ + T + L EDGW N+GD+ + ++ + + GR+KDTIVL
Sbjct: 455 PQVMSGYFKDKAKTSEVLTEDGWFNSGDLVRLTINNE----------ISIVGRSKDTIVL 504
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + + A + +
Sbjct: 505 RGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFSSRG 564
Query: 597 ELSKEKTISLLY 608
+L + ++ LY
Sbjct: 565 DLLANEDVNKLY 576
>gi|224531965|ref|ZP_03672597.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511430|gb|EEF81836.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 645
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 311/555 (56%), Gaps = 24/555 (4%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRVASGLLHYGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
NHSES + VEN + ++ +R I+++ KS + + I VFSY +++
Sbjct: 102 INHSESTFIFVENNKQLQKVLSKKHDLKLVRCIVVIDDDKS--YEEKMGNITVFSYKKLL 159
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+LG E KA S D + E S+DIAT +YTSGTTG PKGVML H++ + Q+ L
Sbjct: 160 ELGAEYLKANPKSFDM----EIEKGSSEDIATIIYTSGTTGMPKGVMLRHESFIFQLDRL 215
Query: 238 YDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYM 294
YD +P + G +S+LP WH +ERAC Y + +GI + Y L D P +
Sbjct: 216 YDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYXKPIGPVLLKDFLLLNPQMI 275
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++E + GI K++ + S ++++ ++ Y FK + GF K+ +
Sbjct: 276 ISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLKTGIVYEKFKEKFLGFSPV--YKKSNL 332
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+ L L+ +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A
Sbjct: 333 FIVLFSKLFLFGGIILIFPVKLLGDILVFKKIKNALGKNFEFGVSGGGALVDYVDYFFKA 392
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+KV GYGLTE+ P+++ RR V +VG + E K+V + EVL G KG +
Sbjct: 393 VGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GEVLSYGEKGELW 451
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VR Q+M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDT
Sbjct: 452 VRSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVKLTINNE----------ISIVGRSKDT 501
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
IVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A + +
Sbjct: 502 IVLRGGENIEPEPLERVLSKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFS 561
Query: 594 DASELSKEKTISLLY 608
+L + ++ LY
Sbjct: 562 SRDDLLINEEVNKLY 576
>gi|408794555|ref|ZP_11206160.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461790|gb|EKJ85520.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 644
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 201/596 (33%), Positives = 319/596 (53%), Gaps = 47/596 (7%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
++ AE L +GV +E ++L +DN W+V+D G+L GA +V RG+ + E+ +I NH
Sbjct: 44 INLAEALIDLGVAAKENVALLADNRLEWIVSDYGILMAGAADVPRGTDITDSEIAYILNH 103
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
E+ + +EN + + + + +I++ K ++ V ++I+ G
Sbjct: 104 CEAKVIFLENDKMLEKFQKNRSQLEFAKTLIVMDKKSTATG--------VLKLYDLIEKG 155
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYD 239
+E R S + R + I DD+ T +YTSGTTG PKGVML H N++HQ L
Sbjct: 156 KELRAKGSKKAEER----MKAIAPDDLFTIIYTSGTTGMPKGVMLKHSNMIHQTSVILGS 211
Query: 240 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 299
++ + ++ LS+LP WHV+ER Y + G YT VR+L+DD+++ +P +M S P
Sbjct: 212 MIEIKQDERMLSILPVWHVFERVFEYLAIAAGCATYYTNVRDLRDDMKKAKPTFMASAPR 271
Query: 300 VYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
++E++Y+GI +I + A RR + S + A R +G + + P +V
Sbjct: 272 LWESIYNGIYTRINDPKQTPALRRGLFNLAYFFSKHFNAATRFLKGNQVDYVGRNP--IV 329
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 415
+L + + IL + L + +V KI+ A G KA VSGGG+L H+D F+ IG
Sbjct: 330 SLFKGFYYLTVAIILAVPYFLLDLVVLSKIREATGGELKASVSGGGALQRHVDAFFNDIG 389
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD--------AETNEVLPAG 467
+ V GYG+TE+SPVI+ R V GSVG T ++I D + N+ L +G
Sbjct: 390 INVLEGYGMTETSPVISVRTFKKLVQGSVGVITPETSVQIRDDLGKVLTHVDANQKLISG 449
Query: 468 ---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
++G++ +RG QVM+GY+KNP T + L +DGW++TGDIG + L
Sbjct: 450 KYGARGVIHIRGPQVMKGYYKNPETTAKVL-KDGWMDTGDIGMFNFKKT----------L 498
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
+ GRAKDT+VL GENVEP+ +E+ S I Q++VIGQDQ+ GA++VPD +++
Sbjct: 499 TITGRAKDTVVLLGGENVEPVPIEDKLTESPYIAQVMVIGQDQKNLGALVVPDFDKLTEW 558
Query: 585 AKRLSIVHADASEL-SKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFTV 634
AK I D +L K + E++ +K F Q+ P ++ + F V
Sbjct: 559 AKENGISETDKQKLIENPKVLDFYKKEIKALNNTKTGFKSFEQVTPFILITKSFEV 614
>gi|224003691|ref|XP_002291517.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973293|gb|EED91624.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 792
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 327/649 (50%), Gaps = 98/649 (15%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
++E ++ A + +GVK +++ +NS WL+ D G+ G + VRG+ + +EL
Sbjct: 148 QMEDKVRRSAAAFKNLGVKKGVNVAVLGENSAMWLIVDHGIQLAGGASAVRGADAPLDEL 207
Query: 115 LHIYNHSESVALAV-ENPEFFNRIAETLCSKA------------AMRFIILLW-GKKSSV 160
+IY HS+S +AV ++ ++A+ +K A++ I+L+ GKK+
Sbjct: 208 RYIYEHSDSAGIAVLQDVNLLQKLAKDAKAKGLDSLGLRNDSSGAVKTIVLMHKGKKTD- 266
Query: 161 APDIVEEIPVFSYDEIIDLGR----ESR--KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
DEI LG E R DS + + I D++T VYTS
Sbjct: 267 -------------DEIKALGDANGVEVRVLSELLDSTTPLRDKELPAIDRSDLSTIVYTS 313
Query: 215 GTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF 268
GTTG PKGVMLTH NLLHQ YD G+ LS+LP WH+ ER F+
Sbjct: 314 GTTGRPKGVMLTHGNLLHQTGHRMAPTRPYDETEPLPGELMLSLLPVWHITERTFELFML 373
Query: 269 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 328
RG ++Y+ +R K+DL +YQP +M+ VP V E + G+Q + + AA + + +
Sbjct: 374 VRGCHVVYSGIRWFKNDLAKYQPQWMVLVPRVLEKVAFGVQDKFASGGAAVKALVKLFTA 433
Query: 329 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 388
S ++I +G + P +D + + II L PL+ L KLV+KK+Q
Sbjct: 434 TSTLKNKHQKIRKGLVVGDEPPTP------MDGIISTIIVKALAPLNFLGNKLVWKKVQD 487
Query: 389 AI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL--GSVG 445
G + +SGG +L ++ FYE G+ + VGYGLTE SP+++ RR N++ G VG
Sbjct: 488 GFGGRQRVIISGGSALAGSLETFYENCGIDILVGYGLTECSPLLSYRRTDSNLVTAGCVG 547
Query: 446 HPINHTEIKIVDAETN------EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 499
TE+++VD E N + LP G G+V RG QVM+GY+KNP AT +A+D+ GW
Sbjct: 548 FAATDTELRVVDPEANPENGERKALPDGLAGVVLGRGPQVMKGYYKNPEATGKAVDKWGW 607
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIR 558
+TGD+G I P G L+L GRAKDTIVLS GEN+EP +E+A + S L+
Sbjct: 608 FDTGDLGRINP---------ATGDLILTGRAKDTIVLSNGENIEPQPIEDAIMSESDLVE 658
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMA-------AKRL----------------------S 589
Q+++ GQD R AI V E++ A AK++
Sbjct: 659 QVMLSGQDGRSLIAITVLSPNELVNAGLLEESRAKQILKDHDIVNDPKCSEEECAEACER 718
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ A A +K + E+++ TS SF Q+ ++V EPF +
Sbjct: 719 LAKASAEIRAKGAVTKQVASEVKRATSSGSFRKWEQVSDVYVTLEPFAM 767
>gi|429124895|ref|ZP_19185427.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
gi|426279278|gb|EKV56304.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
Length = 625
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 323/617 (52%), Gaps = 50/617 (8%)
Query: 29 RNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
+N + A R R N KL ++ A+ V G+ ++ +++FS+N W
Sbjct: 16 KNMPQSPAYRYR--DNNEEKITITYKKLYDKVNAIAKAFDVKGLS-KKHVAIFSENRIEW 72
Query: 89 LVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMR 148
++D +LA G+ +V RG S+S+EL +I HSES A+ VEN FN+I + +
Sbjct: 73 FISDMALLALGSADVPRGIDSTSDELNYIIEHSESQAVLVENEYVFNKIKK---HHKDLS 129
Query: 149 FIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIA 208
I+ L K PD ++S+++ ++LG ES D A K K + ++ A
Sbjct: 130 LIVFLDSSKHD--PDN----NIYSFEKFLELGEESLNG--DEEFAVK--KASKLTNESTA 179
Query: 209 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF 268
T +YTSGTTG PKGV+LTH N+LH IR L DI+ + G+K L++LP WH+YER Y
Sbjct: 180 TIIYTSGTTGKPKGVILTHGNILHNIRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTA 239
Query: 269 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 328
G T R LK+D +P ISVP ++ +Y+ + K I R +A+ I+
Sbjct: 240 ITGCFTAITNKRYLKNDFTEEKPDIFISVPAIWVNIYNTVMKNIDRKGTIARNLAKFFIK 299
Query: 329 ISFAYTAFKRIYEGFCL-----TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
S Y R ++ K+ Y + + D ++ H +A+K+VY
Sbjct: 300 RSLKYIRSLRFQNDLVYLLGEESKAHKKSEYSIGMFDPIY-----------HKMAKKMVY 348
Query: 384 KKI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI + G + +SGGG+LPM+I+ F EA+G+ + VG+G+TE+SPV+ R P N G
Sbjct: 349 SKILELTGGKMRLTISGGGALPMYIEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRG 408
Query: 443 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 502
+ G PI +I+I D E N + G G+ ++G + + Y+K+P TKQA DG+ N+
Sbjct: 409 TCGAPIPEVKIEIRDKEGN-ICKDGVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNS 466
Query: 503 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 562
GD+G G +VL GRAK+TIVL TGENVEP +E AL S I QI++
Sbjct: 467 GDLGAYTQQ----------GEIVLTGRAKETIVLLTGENVEPQPIENKALESPYIYQIML 516
Query: 563 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ 621
IGQD+ GAIIV +KE + + I + + + S + L+ EL + K F+
Sbjct: 517 IGQDKASTGAIIVINKENIKEYFDKHKISYDENTLSSSKDVYKLIREELDNLINYKNGFR 576
Query: 622 ----IGPIHVVDEPFTV 634
I + + DE FT+
Sbjct: 577 PYEAIAKMIITDEEFTI 593
>gi|387827494|ref|YP_005806776.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149046|gb|ADQ29117.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 645
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 203/581 (34%), Positives = 327/581 (56%), Gaps = 30/581 (5%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I NHSES
Sbjct: 48 ASGLLHCGIKRGEKVVIISDSRREWIIIDVATLGLGCVDVPRGNDSSEDELAYIINHSES 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ VEN + +++ +R I+++ KS + + I VFSY ++++LG E
Sbjct: 108 TFIFVENNKQLHKVLSKKHDLRLVRCIVVIDDDKS--YEEKIGNITVFSYKKLLELGTEY 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+A S D + E S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P
Sbjct: 166 LRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPT 221
Query: 244 -ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
+ G +S+LP WH +ERAC Y + +GI + Y+ L D P ++SVP +
Sbjct: 222 LKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRI 281
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + GI K++ + S ++ V +++ Y K + G L+ K+ ++L++L
Sbjct: 282 WEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFS 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV
Sbjct: 339 KLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVL 398
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+ P+++ RR V +VG + E K+V + VL G KG + VR Q+
Sbjct: 399 EGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID-GRVLSYGEKGELWVRSPQI 457
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GYFK+ + T + L EDGW NTGD+ + ++ + + GR+KDTIVL G
Sbjct: 458 MSGYFKDRAKTSEVLTEDGWFNTGDLVRLTINNE----------ISIVGRSKDTIVLRGG 507
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
EN+EP LE +S I I+++GQDQ+ GA+I P+ + + A + + S+L
Sbjct: 508 ENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIAPNFDNLEKWANSSGVSFSSRSDLL 567
Query: 600 KEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 634
+ ++ LY + T +K F +I ++ +PFT+
Sbjct: 568 ANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|219684359|ref|ZP_03539303.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219672348|gb|EED29401.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 645
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 197/558 (35%), Positives = 317/558 (56%), Gaps = 30/558 (5%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A GL G+K EK+ + SD+ W++ D L G ++V RG+ SS +EL +I
Sbjct: 42 NEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIATLGLGCVDVPRGNDSSEDELAYI 101
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRF---IILLWGKKSSVAPDIVEEIPVFSYD 174
NHSES + VEN + ++ + L K +R I+++ KS + + I +FSY
Sbjct: 102 INHSESTFIFVENNK---QLQKVLSKKHDLRLVKCIVVIDDDKS--YEEKMGTITIFSYK 156
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++++LG E + S D + E S DIAT +YTSGTTG PKGVML H++ + Q+
Sbjct: 157 KLLELGAEHLRVNPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQL 212
Query: 235 RSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQP 291
LYD +P + G +S+LP WH +ERAC Y + +G+ + Y+ L D P
Sbjct: 213 DRLYDYLPEIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLKDFLLLNP 272
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+ISVP ++E + GI K++ + S +++V +++ Y + GF K+
Sbjct: 273 QMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKVGIIYAKLNEKFLGFSPV--YKK 329
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L ++D F
Sbjct: 330 PNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGALVDYVDYF 389
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +VLP G KG
Sbjct: 390 FKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GKVLPYGEKG 448
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ VR Q+M GYFK+ + T + L EDGWL TGD+ + ++ + + GR+
Sbjct: 449 ELWVRSPQIMSGYFKDKAKTSEVLTEDGWLKTGDLVRLTINNE----------ISIVGRS 498
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + + A +
Sbjct: 499 KDTIVLRGGENIEPEPLERILGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEKWANSNGV 558
Query: 591 VHADASELSKEKTISLLY 608
+ S+L + ++ LY
Sbjct: 559 SFSSRSDLLVNEDVNRLY 576
>gi|418667893|ref|ZP_13229298.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410756338|gb|EKR17963.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 681
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 219/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+I+ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELIEKGKALRAGGSKKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 353
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ P + +A +K+V KI++A G +A +SGGG+LP
Sbjct: 354 ALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 472
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+++E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVQIENKLQESAYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + I LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|418721482|ref|ZP_13280659.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418736583|ref|ZP_13292982.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410742174|gb|EKQ90924.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410747469|gb|EKR00374.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 681
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 215/668 (32%), Positives = 348/668 (52%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++++ LF+D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQKQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DSTSTSPGVLK------MQDLIEKGKKLRTGGSRKAEER----VSAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL------------ 362
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 294 RGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAG 353
Query: 363 ----------------WARIICAILWPLH-LLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ +I + L+ +K+V KI++A G KA +SGGG+LP
Sbjct: 354 GLGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I ++ N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNAVL 472
Query: 465 PA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ A+ I+ + +L + + LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|421109934|ref|ZP_15570441.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410004961|gb|EKO58765.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 681
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+++ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELVEKGKSLRAGGSKKAEER----IAAIH 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 353
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP
Sbjct: 354 ALGAYFAGTELYFLTSPLYTVSGLAFILNSFTLDKIVLAKIRAATGGQLKASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 472
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + + LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|456863005|gb|EMF81517.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 648
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 212/638 (33%), Positives = 335/638 (52%), Gaps = 82/638 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L ++ + AE L +GV+ +++ LF+DN W++AD G++ TGA++V RG+ + E
Sbjct: 4 SQLYEQGIQLAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAVDVPRGTDITDSE 63
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+++I NHSE + +EN + + ++ +I++ S +P V
Sbjct: 64 IVYILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMM--DPMSASPG------VLKM 115
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N++HQ
Sbjct: 116 QDLIEKGKKLRAGGSKKAEDR----ISAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQ 171
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
I+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL +P +
Sbjct: 172 IKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATVKPTF 231
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCLTRNQ 349
M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 232 MGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEVDYTG 290
Query: 350 KQP--SYLVALIDWLWARI------------------------ICAILWPLHLLA----- 378
+ P S+ ++ +L + + + L+ + LA
Sbjct: 291 RNPIGSFFYGILMFLQFLLTGPFTLTVFAGVLGVYFAGTELYYLTSFLYVIAGLALLLNS 350
Query: 379 ---EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 434
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 351 FTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPVISVR 410
Query: 435 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQG 482
++GSVG T+++I + + N VL G KG+V V+G QVM+G
Sbjct: 411 TFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVVFVKGPQVMKG 469
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
YFKN AT +A+ DGW+NTGD+G I + L L GRAKDTIVL GENV
Sbjct: 470 YFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTIVLLGGENV 518
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
EP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I + +L +
Sbjct: 519 EPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKDKLIENP 578
Query: 603 TISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 634
+ LY E++ +K F Q+ P ++ +PF V
Sbjct: 579 KVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 616
>gi|445061913|ref|ZP_21374382.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
gi|444506705|gb|ELV06998.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
Length = 625
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 316/591 (53%), Gaps = 48/591 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
KL +I A+ + G+ ++ +++FS+N W ++D +LA G+ +V RG S+S+EL
Sbjct: 40 KLYDKINAVAKAFDLKGLS-KKHVAIFSENRIEWFISDMALLALGSADVPRGIDSTSDEL 98
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I HSE+ A+ VEN FN+I + + I+ L K PD ++S++
Sbjct: 99 NYIIEHSEAQAVLVENEYVFNKIKK---HHKDLSLIVFLDSFKHD--PDN----NIYSFE 149
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++++LG ES D A K K + ++ AT +YTSGTTG PKGV+LTH N+LH I
Sbjct: 150 KLLELGEESLNG--DEEFAVK--KASKLTNESTATIIYTSGTTGKPKGVILTHGNILHNI 205
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R L DI+ + G+K L++LP WH+YER Y G T R LK+D +P
Sbjct: 206 RVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAITGCFTAITNKRYLKNDFTEEKPDIF 265
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT-----RNQ 349
ISVP ++ +Y+ + K I R +A+ I+ S Y R ++
Sbjct: 266 ISVPAIWVNIYNTVMKNIDRKGTIARNLAKFFIKRSLKYIRSLRFQNDLVYLLGDEYKSH 325
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHID 408
K+ Y + + D L+ H +A+K+VY KI + G + +SGGG+LPM+I+
Sbjct: 326 KKSEYSIGIFDPLY-----------HKMAKKMVYSKILELTGGKMRLTISGGGALPMYIE 374
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I D E N + G
Sbjct: 375 DFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEIRDKEGN-ICKDGV 433
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G+ ++G + + Y+K+P TKQA DG+ N+GD+G G +VL G
Sbjct: 434 MGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGAYTQQ----------GEIVLTG 482
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
RAK+TIVL TGENVEP +E AL S I QI++IGQD+ GAIIV +KE + +
Sbjct: 483 RAKETIVLLTGENVEPQPIENKALESPYIHQIMLIGQDKASTGAIIVINKENIKEYFDKH 542
Query: 589 SIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 634
I + + + S L+ EL + K F+ I + + DE FT+
Sbjct: 543 KISYDENTLSSSRDVYKLIREELDNLINYKNGFRPYEAIAKMIITDEEFTI 593
>gi|418696124|ref|ZP_13257133.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955653|gb|EKO14585.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 682
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 10 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 68 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+++ G+ R S + R I
Sbjct: 128 LTNVKTLIMM--DPTSNSPGVLK------MQELVEKGKSLRAGGSKKAEER----IAAIH 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 176 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 295 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 354
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP
Sbjct: 355 ALGAYFAGTELYFLTSPLYTVSGLAFILNSFTLDKIVLAKIRAATGGQLKASISGGGALP 414
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 415 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 473
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 474 TEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 532
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 533 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 582
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + + LY E++ +K F Q+ P
Sbjct: 583 IVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 642
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 643 LISKPFEV 650
>gi|410941204|ref|ZP_11373003.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783763|gb|EKR72755.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 682
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 220/668 (32%), Positives = 345/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + +L ++ + AE L +GV+ ++K+ L +D
Sbjct: 10 FRESVEKYRDLPAFFSKDSKKNYYPTTY--GQLYEQGIQLAEALIELGVQQKQKVGLLAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 68 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P V E+I+ G+ R S + R I
Sbjct: 128 LTNVKTLIMM--DPASNSPG------VLKMQELIERGKTLRAGGSKKAEER----IAAIH 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 176 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKVGARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 295 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAS 354
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ PL++++ +K+V KI++A G KA +SGGG+LP
Sbjct: 355 ALGAYFAGTELYFLTSPLYIVSGLALVLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 414
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T+++I + + N VL
Sbjct: 415 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTKLQIRN-DNNAVL 473
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 474 TEIDENGNIAQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIT-DGWMNTGDMGMINFKK 532
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDTIVL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 533 T----------LTLTGRAKDTIVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 582
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK + + +L + I LY E++ +K F Q+ P
Sbjct: 583 IVVPDFEKLQEWAKENGVNETNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFI 642
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 643 LISKPFEV 650
>gi|421089079|ref|ZP_15549894.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410002200|gb|EKO52722.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 682
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 10 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 68 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+++ G+ R S + R I
Sbjct: 128 LTNVKTLIMM--DPTSNSPGVLK------MQELLEKGKSLRAGGSKKAEER----IAAIH 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 176 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 295 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 354
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP
Sbjct: 355 ALGAYFAGTELYFLTSPLYTVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 414
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 415 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 473
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 474 TEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 532
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 533 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 582
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + + LY E++ +K F Q+ P
Sbjct: 583 IVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 642
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 643 LISKPFEV 650
>gi|421096224|ref|ZP_15556931.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361125|gb|EKP12171.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
Length = 681
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 215/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++++ LF+D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQKQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DSTSTSPGVLK------MQDLIEKGKKLRTGGSRKAEER----VSAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL------------ 362
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 294 RGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAG 353
Query: 363 ----------------WARIICAILWPLH-LLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ +I + L+ +K+V KI++A G KA +SGGG LP
Sbjct: 354 GLGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGGLP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I ++ N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNAVL 472
Query: 465 PA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ A+ I+ + +L + + LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|418688201|ref|ZP_13249357.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739660|ref|ZP_13296041.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737058|gb|EKQ81800.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752782|gb|EKR09754.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 682
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 10 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 68 NRIEWIIADYGVILTGAANVSRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+++ G+ R S + R I
Sbjct: 128 LTNVKTLIMM--DPTSNSPGVLK------MQELLEKGKSLRAGGSKKAEER----IAAIH 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 176 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 295 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 354
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP
Sbjct: 355 ALGAYFAGTELYFLTSPLYTVSGLAFVLNSFALDKIVLAKIRAATGGQLKASISGGGALP 414
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 415 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 473
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 474 TEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 532
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 533 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 582
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + + LY E++ +K F Q+ P
Sbjct: 583 IVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 642
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 643 LISKPFEV 650
>gi|421130910|ref|ZP_15591101.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357714|gb|EKP04934.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 682
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 10 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 68 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+++ G+ R S + R I
Sbjct: 128 LTNVKTLIMM--DPTSNSPGVLK------MQELLEKGKSLRAGGSKKAEER----IAAIH 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 176 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 295 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 354
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP
Sbjct: 355 ALGAYFAGTELYFLTSPLYTVSGLAFVLNSFALDKIVLAKIRAATGGQLKASISGGGALP 414
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 415 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 473
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 474 TEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 532
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 533 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 582
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + + LY E++ +K F Q+ P
Sbjct: 583 IVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 642
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 643 LISKPFEV 650
>gi|384107780|ref|ZP_10008678.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
gi|383870636|gb|EID86238.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
Length = 692
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/566 (34%), Positives = 305/566 (53%), Gaps = 29/566 (5%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F+ L +++L+FA GL +G K +++ +DN W V G++A G I++ RG+
Sbjct: 63 FQPVLYKDLSEQMLNFAGGLITLGTKKGDRIGHLADNRQEWQVVSLGIMAAGGIDIPRGT 122
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ +E+ +I + +E ++VENP ++ E + ++ II++ + ++ +
Sbjct: 123 DVTVKEMAYILSFTECETVSVENPFVLGKLCECMSQIPTLKNIIIIDTQNQALDKYELAG 182
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
++ YD+I+ +G+ R D + E I +D +A+ ++TSGTTG PKGV LTH
Sbjct: 183 RNLYRYDQILKMGQLWRNEHPTIIDQQIR---EEISADQVASIIFTSGTTGVPKGVQLTH 239
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDD 285
N L Q+ +L +I D+ + +LP WHVY+RA +++ L Y+ L D
Sbjct: 240 NNFLCQLPALSEIFDFHRADRSMCILPIWHVYQRAFEFYVMYFAGTLCYSKPVTSMLIQD 299
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
+ +P M VP V+E GI + I + A L ++ +A EG
Sbjct: 300 FAKVRPQLMPCVPRVWE----GIYQAISKKIKKQSKTAWLLFKLLSNASANALTLEGKIK 355
Query: 346 TRNQ--KQPSYLVALIDWLW-ARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGG 401
R+ KQP+YL + LW +C L PL L KL +K I+ G A G+SGGG
Sbjct: 356 GRHPLFKQPNYLQIGLSKLWYVPYVC--LLPLRALGNKLYFKNIREVTGGQFACGISGGG 413
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
LP +D FY +IG++V YGLTE++PV+A+R+ V+G++G + + ++KI+D E
Sbjct: 414 GLPPFLDRFYNSIGIRVVEAYGLTETAPVVASRKRFAPVMGTIGQALPYNQVKILDTEGK 473
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
+ P G KGI+ V+G VM+GY+K P T Q LD+DGW NTGD+ +
Sbjct: 474 PMAP-GQKGILYVKGENVMKGYYKQPELTAQVLDQDGWFNTGDLAM----------QTVK 522
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
G L+++GR KDTIVL +GENVEP +E S I +V+GQDQ GA+I+P E +
Sbjct: 523 GELMIKGRQKDTIVLKSGENVEPFPIEAKLAESPYITTAIVVGQDQNSLGALIIPAVEAI 582
Query: 582 LMAAKRLSIVHADASELSKEKTISLL 607
AAK+ S H D E+ + T LL
Sbjct: 583 RNAAKQGS--HPD-EEIKIDNTQKLL 605
>gi|359726629|ref|ZP_09265325.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
Length = 681
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 216/668 (32%), Positives = 348/668 (52%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR + D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 9 FRESSEKYRDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQRQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DPMSASPGVLK------MQDLIEKGKKLRAGGSKKAEDR----ISAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARI----------- 366
R L R+++ ++ K R +G + + P S+ ++ +L +
Sbjct: 294 RGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFLQFLLTGPFTLTVFAG 353
Query: 367 -------------ICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ + L+ + LA +K+V KI++A G KA +SGGG+LP
Sbjct: 354 VLGVYFAGTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVL 472
Query: 465 PA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ A+ I + +L + + LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAQENGISETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|421117548|ref|ZP_15577908.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410010882|gb|EKO69013.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
Length = 681
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 221/672 (32%), Positives = 345/672 (51%), Gaps = 92/672 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+I+ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELIEKGKALRAGGSKKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEG-----------------------FCLTRNQKQPSYLV 356
R L ++++ ++ K R +G F LT P L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYAGRNPIVSFFYGILMFFQFLLT----GPFTLT 349
Query: 357 ALIDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGG 400
L L A L+ P + +A +K+V KI++A G +A +SGG
Sbjct: 350 VLAGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGG 409
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
G+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + +
Sbjct: 410 GALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DN 468
Query: 461 NEVL------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 508
N VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 469 NAVLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMI 527
Query: 509 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 568
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 528 NFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQK 577
Query: 569 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QI 622
GAI+VPD E++ AK I ++ +L + I LY E++ +K F Q+
Sbjct: 578 NLGAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQV 637
Query: 623 GPIHVVDEPFTV 634
P ++ +PF V
Sbjct: 638 TPFILISKPFEV 649
>gi|418676760|ref|ZP_13238038.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|400322660|gb|EJO70516.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
Length = 682
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 10 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 68 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+++ G+ R S + R I
Sbjct: 128 LTNVKTLIMM--DPTSNSPGVLK------MQELLEKGKSLRAGGSKKAEER----IAAIH 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 176 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 295 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 354
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+LP
Sbjct: 355 ALGAYFAGTELYFLTSPLYSVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 414
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 415 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 473
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 474 TEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 532
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 533 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 582
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + + LY E++ +K F Q+ P
Sbjct: 583 IVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 642
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 643 LISKPFEV 650
>gi|24215009|ref|NP_712490.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|417762662|ref|ZP_12410650.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417772209|ref|ZP_12420098.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417777581|ref|ZP_12425398.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418671706|ref|ZP_13233055.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680951|ref|ZP_13242188.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692704|ref|ZP_13253782.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418704164|ref|ZP_13265043.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418730633|ref|ZP_13289127.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421120870|ref|ZP_15581175.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24196054|gb|AAN49508.1|AE011400_13 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|400327389|gb|EJO79641.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400357937|gb|EJP14057.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941407|gb|EKN87036.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409945580|gb|EKN95595.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410346208|gb|EKO97218.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410572568|gb|EKQ35633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581404|gb|EKQ49216.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410766144|gb|EKR36832.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410774842|gb|EKR54846.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|455667422|gb|EMF32743.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 681
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 219/668 (32%), Positives = 346/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+I+ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELIEKGKALRAGGSKKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 353
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ P + +A +K+V KI++A G +A +SGGG+LP
Sbjct: 354 ALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 472
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + I LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|418698153|ref|ZP_13259132.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418711864|ref|ZP_13272616.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418717129|ref|ZP_13276966.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726085|ref|ZP_13284696.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421123845|ref|ZP_15584115.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135046|ref|ZP_15595176.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|409959995|gb|EKO23749.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410020929|gb|EKO87724.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438332|gb|EKP87418.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410762857|gb|EKR29016.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410767830|gb|EKR43091.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410787196|gb|EKR80930.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|456969848|gb|EMG10764.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 681
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 219/668 (32%), Positives = 346/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+I+ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELIEKGKALRAGGSKKAEER----IAAIH 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 353
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ P + +A +K+V KI++A G +A +SGGG+LP
Sbjct: 354 ALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 472
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + I LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|45657502|ref|YP_001588.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417765801|ref|ZP_12413757.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417782883|ref|ZP_12430606.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|421086152|ref|ZP_15547003.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102594|ref|ZP_15563198.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600741|gb|AAS70225.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400351740|gb|EJP03953.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409953584|gb|EKO08080.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410367708|gb|EKP23092.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431717|gb|EKP76077.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 681
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 219/668 (32%), Positives = 346/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+I+ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELIEKGKALRAGGSKKAEER----ITAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 353
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ P + +A +K+V KI++A G +A +SGGG+LP
Sbjct: 354 ALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 472
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + I LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|374586232|ref|ZP_09659324.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875093|gb|EHQ07087.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 637
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 322/590 (54%), Gaps = 47/590 (7%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
++ A L +GV+ + + L +DN W++AD G+L TGA +V RG+ + ++ +I H
Sbjct: 50 INLATALIDLGVQARDHIGLLADNRLEWIIADYGVLLTGAADVPRGTDVTDADITYILPH 109
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
S++ VEN +I + ++ II++ +++ V+ V S ++I+ G
Sbjct: 110 SDAKVCFVENKAVLEKIKKNQSQLPNLKTIIMM-DRETPVSGG------VLSMYDLIEKG 162
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
++ R + D R + + DD+ T +YTSGTTG PKGVMLTH N++ Q+ ++
Sbjct: 163 KKLR----EQGDRRAEERIAQVKEDDLFTLIYTSGTTGAPKGVMLTHANMVSQVLNMPSD 218
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
+ D+ +S+LP WHV+ER SRG+ YT +RN+++DL +P +M S P +
Sbjct: 219 INLTPSDRIVSILPVWHVFERVFEMLAISRGVCTYYTNIRNIREDLAIVRPTFMASAPRL 278
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E +Y GI ++ A RR + A S + R L + + P + L
Sbjct: 279 WENIYQGILAKVEGGPAVRRALFNAAYYCSRNFKGAVRFLSSRQLDTHGRNPGLSLLLGL 338
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQ 419
W R+ + L P +LL + +V KKI++A G+ + VSGGG+LP+H+D F+ IG+ V
Sbjct: 339 WNILRLF-SFLIP-NLLLDLIVLKKIRAATGGVLRGSVSGGGALPIHVDEFFNNIGIPVL 396
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA---------GSKG 470
GYG+TE+SPV+A R V G+VG +TE++++D +VL + G KG
Sbjct: 397 EGYGMTETSPVLAVRTYKRLVPGTVGPIWPNTELRLIDIANGQVLYSTEAGSPQRRGVKG 456
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ VRG QVM+GY+KNP AT + L +DGW+NTGD+G I ++ C L + GR+
Sbjct: 457 EIHVRGPQVMKGYYKNPEATNKVL-KDGWMNTGDLGMITFNN-------C---LKIVGRS 505
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
K+T+VL GENVEP+ +E L S I Q +V+GQD++ AI+VP + L
Sbjct: 506 KETVVLLGGENVEPVPIENRLLESPFIAQCMVVGQDKKYLSAIVVP-------SVDHLKD 558
Query: 591 VHADASELSKEKTIS-LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
A +L+K + L+ E++K S K +I + ++ +PF V
Sbjct: 559 YGASTEDLAKNAEVQRLIRDEVKKLISNEAGFKSFEKIVDVRILPKPFEV 608
>gi|434381721|ref|YP_006703504.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
gi|404430370|emb|CCG56416.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
Length = 628
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 325/593 (54%), Gaps = 52/593 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
K+ +I A+ V G+ + +++FS+N W + D +LA G+ +V RG+ S+SEEL
Sbjct: 45 KIYDKINAIAKAFDVKGLSGKH-VAIFSENRIEWFICDMALLAIGSADVPRGNDSTSEEL 103
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I HS+S+A+ VEN N+I + S ++ II+L +I +S+
Sbjct: 104 NYIIEHSDSLAVIVENQYVLNKIDK---SSKKIQLIIVLDNSIHEPRNNI------YSFS 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N+LH +
Sbjct: 155 KFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNV 210
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 211 RVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIF 270
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN + +
Sbjct: 271 ISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSIRY------------IRNLRYQNN 318
Query: 355 LVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM+I
Sbjct: 319 MVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYI 378
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N + G
Sbjct: 379 EDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDG 437
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G +VL
Sbjct: 438 ELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------GEIVLT 486
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V +
Sbjct: 487 GRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDK 546
Query: 588 LSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 634
I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 547 HKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|455792690|gb|EMF44430.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 681
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 346/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+I+ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELIEKGKALRAGGSKKAEER----IAAIH 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 353
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ P + +A +K+V KI++A G +A +SGGG+LP
Sbjct: 354 ALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 472
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q ++IGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMIIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + I LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|431807605|ref|YP_007234503.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
gi|430780964|gb|AGA66248.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
Length = 623
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 325/593 (54%), Gaps = 52/593 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
K+ +I A+ V G+ + +++FS+N W + D +LA G+ +V RG+ S+SEEL
Sbjct: 40 KIYDKINAIAKAFDVKGLSGKH-VAIFSENRIEWFICDMALLAIGSADVPRGNDSTSEEL 98
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I HS+S+A+ VEN N+I + S ++ II+L +I +S+
Sbjct: 99 NYIIEHSDSLAVIVENQYVLNKIDK---SSKKIQLIIVLDNSIHEPRNNI------YSFS 149
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N+LH +
Sbjct: 150 KFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNV 205
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 206 RVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIF 265
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN + +
Sbjct: 266 ISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSVRY------------IRNLRYQNN 313
Query: 355 LVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM+I
Sbjct: 314 MVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYI 373
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N + G
Sbjct: 374 EDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDG 432
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G +VL
Sbjct: 433 ELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------GEIVLT 481
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V +
Sbjct: 482 GRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDK 541
Query: 588 LSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 634
I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 542 HKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 593
>gi|417777979|ref|ZP_12425791.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410781949|gb|EKR66516.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 682
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR + D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 10 FRESSEKYRDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQRQRVGLFAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + +EN + +
Sbjct: 68 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ S +P +++ ++I+ G++ R S + R I
Sbjct: 128 LTNVKTLIMM--DPMSASPGVLK------MQDLIEKGKKLRAGGSKKAEDR----ISAID 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 176 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWL--------------- 362
R L R+++ ++ K R +G + + P S+ ++ ++
Sbjct: 295 RGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFVQFLLTGPFTLTVFAG 354
Query: 363 ----------------WARIICAILWPLH-LLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ +I + + L+ +K+V KI++A G KA +SGGG+LP
Sbjct: 355 VLGVYFAGTELYYLTSFLYVIAGLAFLLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 414
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 415 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVL 473
Query: 465 PA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 474 TEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKK 532
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 533 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGA 582
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ A+ I + +L + + LY E++ +K F Q+ P
Sbjct: 583 IVVPDFEKLQEWAQENGISETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 642
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 643 LISKPFEV 650
>gi|300871650|ref|YP_003786523.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
gi|300689351|gb|ADK32022.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
Length = 628
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 325/593 (54%), Gaps = 52/593 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
K+ +I A+ V G+ + +++FS+N W + D +LA G+ +V RG+ S+SEEL
Sbjct: 45 KIYDKINAIAKAFDVKGLSGKH-VAIFSENRIEWFICDMALLAIGSADVPRGNDSTSEEL 103
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I HS+S+A+ VEN N+I + S ++ II+L +I +S+
Sbjct: 104 NYIIEHSDSLAVIVENQYVLNKIDK---SSKKIQLIIVLDNSIHEPRNNI------YSFS 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N+LH +
Sbjct: 155 KFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNV 210
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 211 RVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIF 270
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN + +
Sbjct: 271 ISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSVRY------------IRNLRYQNN 318
Query: 355 LVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM+I
Sbjct: 319 MVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYI 378
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N + G
Sbjct: 379 EDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDG 437
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G +VL
Sbjct: 438 ELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------GEIVLT 486
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V +
Sbjct: 487 GRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDK 546
Query: 588 LSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 634
I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 547 HKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|116330937|ref|YP_800655.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116124626|gb|ABJ75897.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 681
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 213/668 (31%), Positives = 348/668 (52%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++++ LF+D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQKQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DSTSTSPGVLK------MQDLIEKGKKLRTDGSRKAEER----VSAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPVWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL------------ 362
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 294 RGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAG 353
Query: 363 ----------------WARIICAILWPLH-LLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ +I + L+ +K+V KI++A G KA +SGGG+LP
Sbjct: 354 ALGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVL 472
Query: 465 PA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG++ ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEMDENGKITQGKLGLKGVLFIKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ A+ I+ + +L + + LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|116328213|ref|YP_797933.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116120957|gb|ABJ79000.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
Length = 681
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 213/668 (31%), Positives = 348/668 (52%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++++ LF+D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQKQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DSTSTSPGVLK------MQDLIEKGKKLRTDGSRKAEER----VSAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL------------ 362
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 294 RGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAG 353
Query: 363 ----------------WARIICAILWPLH-LLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ +I + L+ +K+V KI++A G KA +SGGG+LP
Sbjct: 354 ALGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVL 472
Query: 465 PA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG++ ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEMDENGKITQGKLGLKGVLFIKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ A+ I+ + +L + + LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|404476437|ref|YP_006707868.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
gi|404437926|gb|AFR71120.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
Length = 628
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 324/593 (54%), Gaps = 52/593 (8%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
K+ +I A+ V G+ + +++FS+N W + D +LA G+ +V RG+ S+SEEL
Sbjct: 45 KIYDKINAIAKAFDVKGLSGKH-VAIFSENRIEWFICDMALLAIGSADVPRGNDSTSEEL 103
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I HS+S+A+ VEN N+I + S ++ II+L +I +S+
Sbjct: 104 NYIIEHSDSLAVIVENQYVLNKIDK---SSKKIQLIIVLDNSIHEPRNNI------YSFS 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N+LH +
Sbjct: 155 KFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNV 210
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
R L DI+ + G+K L++LP WH+YER Y G T R+LK+D +P
Sbjct: 211 RVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIF 270
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN + +
Sbjct: 271 ISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSIRY------------IRNLRYQNN 318
Query: 355 LVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+LPM+I
Sbjct: 319 MVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYI 378
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N + G
Sbjct: 379 EDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDG 437
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G+ ++G + + Y+K+ T+QA +DG N+GD+G G +VL
Sbjct: 438 ELGVCYIKGPNIFKEYYKDKELTRQA-KKDGLFNSGDLGAYTKQ----------GEIVLT 486
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V +
Sbjct: 487 GRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDK 546
Query: 588 LSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 634
I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 547 HKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|386074346|ref|YP_005988663.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|353458135|gb|AER02680.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 681
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 345/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ ++K+ L +D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPTTY--SQLYEQGIQLAEALIELGVQQKQKVGLLAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA NV RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ E+I+ G+ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MQELIEKGKALRAGGSKKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+D+ +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 175 PEDLFALIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A +
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVALID 360
R L ++++ ++ K R +G + + P S+ L L
Sbjct: 294 RGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAG 353
Query: 361 WLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
L A L+ P + +A +K+V KI++A G +A +SGGG+LP
Sbjct: 354 ALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVL 472
Query: 465 ------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ AK I ++ +L + I LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|398347129|ref|ZP_10531832.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 679
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 216/631 (34%), Positives = 337/631 (53%), Gaps = 82/631 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
L+ AE L +GVK E + L +DN W++AD G++ TGA +V RG+ + E+++I +H
Sbjct: 44 LNLAEALIDLGVKAREHVGLLADNRIEWIIADYGIILTGAADVPRGTDITDSEIVYIVSH 103
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SES + +EN + + A ++ II++ K S +P +++ YD +I+ G
Sbjct: 104 SESEVVFIENDKMLEKFNRNKSQLAKVKTIIIM--DKDSNSPGVLK-----LYD-LIEKG 155
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
++ R S + R I +D+ T +YTSGTTG PKGV L H N++HQ+ ++ +
Sbjct: 156 KQLRAGGSRKVEER----VAGIKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQVLNVTPM 211
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
+ K LS+LP WHV+ER Y S G YT VR+L+ DL +P +M S P +
Sbjct: 212 LKINAEAKLLSILPVWHVFERVVEYVCISIGAATYYTNVRDLRQDLATVKPTFMGSAPRL 271
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYT----AFKRIYEGFCLTRNQKQP--SY 354
+E +Y+GI +I + + R L ++++ ++ A R G + + + P S+
Sbjct: 272 WENIYNGIYTRI-NDPSQTPTIRRTLFKLAYFFSDKNNASTRFLSGNEVDYHGRNPISSF 330
Query: 355 ---LVALIDWLWA-----RIICAIL-------------WPLHLLA-----------EKLV 382
++ +I +L II AI PL++++ +K+V
Sbjct: 331 FYGILMVIQYLLTGPFTLSIITAIAAYMLAPTSFGYLSLPLYVVSGLGLFLNSATLDKVV 390
Query: 383 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
KI++A G + +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV++ R ++
Sbjct: 391 LSKIRTATGGNLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLII 450
Query: 442 GSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSA 489
GSVG + T ++I + + N+VL G KG+V V+G QVM+GYFKN A
Sbjct: 451 GSVGSIVPKTRLQIRN-DNNDVLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGYFKNDEA 509
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T + L DGW+NTGD+G I + L L GRAKDT+VL GENVEP+ +E
Sbjct: 510 TAKTL-VDGWMNTGDMGMINFKRT----------LTLTGRAKDTVVLLGGENVEPVPIEN 558
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY- 608
S I Q +VIGQDQ+ GAII+PD E++ AK I +D +L + I Y
Sbjct: 559 KLQESPYISQCMVIGQDQKNLGAIIIPDFEKLGEWAKENGIDISDREKLIENPKIVDFYR 618
Query: 609 GELRKW-TSKCSF----QIGPIHVVDEPFTV 634
E++ +K F Q+ P ++ +PF V
Sbjct: 619 KEIKNLNNAKNGFKSFEQVTPFFLITKPFEV 649
>gi|384208744|ref|YP_005594464.1| long-chain acyl-CoA synthetase [Brachyspira intermedia PWS/A]
gi|343386394|gb|AEM21884.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
intermedia PWS/A]
Length = 625
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 321/604 (53%), Gaps = 49/604 (8%)
Query: 43 RRNHRFRV-FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
R N+ +V KL ++ A+ V G+ ++ +++FS+N W ++D +LA G+
Sbjct: 27 RDNNEEKVTITYKKLYDKVNAIAKAFDVKGLS-KKHVAIFSENRIEWFISDMALLALGSA 85
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
+V RG S+S+EL +I HSE+ A+ VEN F +I + + I+ L K
Sbjct: 86 DVPRGIDSTSDELNYIIEHSEAEAVLVENEYVFKKIEK---HHKDLSLIVFLDSSKHD-- 140
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
PD ++S+++ ++LG ES D A K K + ++ AT +YTSGTTG PK
Sbjct: 141 PDN----NIYSFEKFLELGEESLNG--DEEFAIK--KASKLTNESTATIIYTSGTTGKPK 192
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GV+LTH N+LH +R L DI+ + G+K L++LP WH+YER Y G T R
Sbjct: 193 GVILTHGNILHNVRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAIIGCFTAITNKRY 252
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
LK+D +P ISVP ++ +Y+ + K I S R +A+ LI+ S Y R
Sbjct: 253 LKNDFTEERPDIFISVPAIWVNIYNTVMKNIDRKSTFARNLAKFLIKRSIKYIRSVRFQN 312
Query: 342 GFCLT-----RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 395
++ K+ Y + + D ++ H +A K+VY KI+ G +
Sbjct: 313 DLVYLLGDEHKSDKKSEYSIGIFDPIY-----------HKMATKMVYSKIKELTGGKMRL 361
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
+SGGG+LPM+I+ F EA+G+ + VG+G+TE++PV+ R P N G+ G P+ +I++
Sbjct: 362 TISGGGALPMYIEDFIEAVGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVKIEV 421
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
D E N + G G+ ++G + + Y+K+P TKQA DG+ N+GD+G
Sbjct: 422 RDKEGN-ICKDGVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGTYTQQ---- 475
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G +VL GRAK+TIVL TGENVEP +E AL S I QI+++GQD+ GAIIV
Sbjct: 476 ------GEIVLTGRAKETIVLLTGENVEPQPIENKALESPYISQIMLVGQDKASTGAIIV 529
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDE 630
+KE + + I + + + S + L+ EL + + F+ I + + DE
Sbjct: 530 INKENIKEHFDKQKISYDEKTLASSKDVYKLMREELDNLINYRNGFRPYEAIAKMIITDE 589
Query: 631 PFTV 634
FT+
Sbjct: 590 EFTI 593
>gi|296125112|ref|YP_003632364.1| AMP-dependent synthetase/ligase [Brachyspira murdochii DSM 12563]
gi|296016928|gb|ADG70165.1| AMP-dependent synthetase and ligase [Brachyspira murdochii DSM
12563]
Length = 625
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/604 (34%), Positives = 322/604 (53%), Gaps = 49/604 (8%)
Query: 43 RRNHRFRV-FCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
R N+ +V KL ++ A+ V G+ ++ +++FS+N W V+D +LA G+
Sbjct: 27 RNNNDEKVTITYKKLYDKVNAIAKAFEVKGL-AQKHVAIFSENRIEWFVSDMALLALGSA 85
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
+V RG S+S+EL +I HSE+ A+ VEN F +I + + I+LL S
Sbjct: 86 DVPRGIDSTSDELNYIIEHSEAQAVLVENKYVFEKIKK---HHKDLSLIVLL--DSSMHD 140
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
P E ++++D+ +LG E K D A K K + ++ IAT +YTSGTTG PK
Sbjct: 141 P----ENNIYAFDKFEELGEEHLKG--DEEFAVK--KAAKLTNESIATIIYTSGTTGKPK 192
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GV+LTH N+LH +R L DI+ + G+K L++LP WH+YER Y G T R
Sbjct: 193 GVILTHGNILHNVRVLPDIIKLKAGEKLLTILPIWHIYERTISYVTAIIGCFTAITNKRY 252
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
LK+D +P ISVP ++ +Y+ + K I +A + + +I+ S +Y R
Sbjct: 253 LKNDFTEEKPDIFISVPAIWVNIYNTVMKNIDRKNAFLKKFIKFIIKRSISYIRSVRYQN 312
Query: 342 GFCL-----TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 395
R K+ Y + + D L+ H +A+K+VY KI G +
Sbjct: 313 DLVYLIGDEKREDKKAEYSIGMFDPLF-----------HKMAKKMVYSKIMELTGGKIRL 361
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
+SGGG+LPM+I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I
Sbjct: 362 TISGGGALPMYIEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEI 421
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
D + N G G+ ++G + + Y+K+P T QA DG+ N+GD+G
Sbjct: 422 RDKDGNSC-KDGVMGVCWIKGPNIFKEYYKDPELTAQA-KIDGFFNSGDLGTYTQE---- 475
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G +VL GRAK+TIVL TGENVEP +E A+ SS I QI+++GQD+ GAI+V
Sbjct: 476 ------GEIVLTGRAKETIVLLTGENVEPQPIENKAMESSYISQIMLVGQDKASTGAIVV 529
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDE 630
+KE + + I + + + S ++ L+ EL + + K F+ I I + DE
Sbjct: 530 INKENIKYYFDKEKIAYDEKNLASSKEVYKLIREELDRLINYKNGFRPYEAIAKIIITDE 589
Query: 631 PFTV 634
FT+
Sbjct: 590 EFTI 593
>gi|456821979|gb|EMF70485.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 643
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 212/631 (33%), Positives = 328/631 (51%), Gaps = 82/631 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
+ AE L +GV+ ++K+ L +DN W++AD G++ TGA NV RG+ + E+++I NH
Sbjct: 6 IQLAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNH 65
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SE + +EN + + ++ +I++ +S +P V E+I+ G
Sbjct: 66 SEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMM--DPTSNSPG------VLKMQELIEKG 117
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
+ R S + R I +D+ T +YTSGTTG PKGVML H N++HQ+ + +
Sbjct: 118 KALRAGGSKKAEER----IAAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPM 173
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
+ + G + LS+LP WHV+ER Y G YT VR+L+ DL +P +M S P +
Sbjct: 174 LDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRL 233
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY 354
+E +Y+GI +I A + R L ++++ ++ K R +G + + P S+
Sbjct: 234 WENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSF 292
Query: 355 -----------------LVALIDWLWARIICAILW----PLHLLA-----------EKLV 382
L L L A L+ P + +A +K+V
Sbjct: 293 FYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVV 352
Query: 383 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++
Sbjct: 353 LAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLII 412
Query: 442 GSVGHPINHTEIKIVDAETNEVL------------PAGSKGIVKVRGSQVMQGYFKNPSA 489
GSVG + T ++I + + N VL G KG+V ++G QVM+GYFKN A
Sbjct: 413 GSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEA 471
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T +A+ DGW+NTGD+G I + L L GRAKDT+VL GENVEP+ +E
Sbjct: 472 TSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLGGENVEPVPIEN 520
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY- 608
S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L + I LY
Sbjct: 521 KLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYR 580
Query: 609 GELRKW-TSKCSF----QIGPIHVVDEPFTV 634
E++ +K F Q+ P ++ +PF V
Sbjct: 581 KEIKALNNTKNGFKSFEQVTPFILISKPFEV 611
>gi|359685931|ref|ZP_09255932.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 681
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 348/670 (51%), Gaps = 88/670 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 9 FRESAEKYPDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQRQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + VEN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFVENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MRDLIEKGKKLRANGSQKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLL 377
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L +L
Sbjct: 294 RGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVL 351
Query: 378 A----------------------------------EKLVYKKIQSAIGIS-KAGVSGGGS 402
A +K+V KI++A G KA +SGGG+
Sbjct: 352 AGVFGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKIVLSKIRAATGGQLKASISGGGA 411
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 463 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINF 529
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGP 624
GAI+VPD E++ A+ I + +L + + + LY E++ +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 625 IHVVDEPFTV 634
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|418746716|ref|ZP_13303036.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792425|gb|EKR90360.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 682
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 348/670 (51%), Gaps = 88/670 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 10 FRESAEKYPDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQRQRVGLFAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + VEN + +
Sbjct: 68 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFVENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 128 LTNVKTLIMM--DPTSNSPGVLK------MRDLIEKGKKLRANGSQKAEER----IAAID 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 176 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLL 377
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L +L
Sbjct: 295 RGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVL 352
Query: 378 A----------------------------------EKLVYKKIQSAIGIS-KAGVSGGGS 402
A +K+V KI++A G KA +SGGG+
Sbjct: 353 AGVFGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGGGA 412
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 471
Query: 463 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINF 530
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 580
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGP 624
GAI+VPD E++ A+ I + +L + + + LY E++ +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 625 IHVVDEPFTV 634
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|421097955|ref|ZP_15558632.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799027|gb|EKS01110.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 681
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 217/668 (32%), Positives = 347/668 (51%), Gaps = 84/668 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + + L ++ + AE L +GV+ +++ LF+D
Sbjct: 9 FRESAEKYRDLPAFFSKDSKKNYYPMTYFQ--LYEQGIQLAEALIELGVQQRQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + +EN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFIENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
A ++ +I++ S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LANVKTLIMM--DPMSTSPGVLK------MQDLIEKGKKLRAGGSRKAEER----VSAIN 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIIYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWL--------------- 362
R L R+++ ++ K R +G + + P S+ ++ ++
Sbjct: 294 RGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFIQFLLTGPFTLTIFAG 353
Query: 363 -----WARI----ICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGSLP 404
AR + + L+ + LA +K+V KI++A G KA +SGGG+LP
Sbjct: 354 VLGVYLARTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGALP 413
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N VL
Sbjct: 414 RHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVL 472
Query: 465 PA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 473 TEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKK 531
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GA
Sbjct: 532 T----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGA 581
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIH 626
I+VPD E++ A+ I + +L + + LY E++ +K F Q+ P
Sbjct: 582 IVVPDFEKLQEWAQENGINETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFI 641
Query: 627 VVDEPFTV 634
++ +PF V
Sbjct: 642 LISKPFEV 649
>gi|456986311|gb|EMG21907.1| AMP-binding enzyme [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 646
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 212/631 (33%), Positives = 328/631 (51%), Gaps = 82/631 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
+ AE L +GV+ ++K+ L +DN W++AD G++ TGA NV RG+ + E+++I NH
Sbjct: 6 IQLAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNH 65
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SE + +EN + + ++ +I++ +S +P V E+I+ G
Sbjct: 66 SEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMM--DPTSNSPG------VLKMQELIEKG 117
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
+ R S + R I +D+ T +YTSGTTG PKGVML H N++HQ+ + +
Sbjct: 118 KALRAGGSKKAEER----ITAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPM 173
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
+ + G + LS+LP WHV+ER Y G YT VR+L+ DL +P +M S P +
Sbjct: 174 LDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRL 233
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY 354
+E +Y+GI +I A + R L ++++ ++ K R +G + + P S+
Sbjct: 234 WENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSF 292
Query: 355 -----------------LVALIDWLWARIICAILW----PLHLLA-----------EKLV 382
L L L A L+ P + +A +K+V
Sbjct: 293 FYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVV 352
Query: 383 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++
Sbjct: 353 LAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLII 412
Query: 442 GSVGHPINHTEIKIVDAETNEVL------------PAGSKGIVKVRGSQVMQGYFKNPSA 489
GSVG + T ++I + + N VL G KG+V ++G QVM+GYFKN A
Sbjct: 413 GSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEA 471
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T +A+ DGW+NTGD+G I + L L GRAKDT+VL GENVEP+ +E
Sbjct: 472 TSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLGGENVEPVPIEN 520
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY- 608
S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L + I LY
Sbjct: 521 KLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYR 580
Query: 609 GELRKW-TSKCSF----QIGPIHVVDEPFTV 634
E++ +K F Q+ P ++ +PF V
Sbjct: 581 KEIKALNNTKNGFKSFEQVTPFILISKPFEV 611
>gi|422004329|ref|ZP_16351549.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256998|gb|EKT86406.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 681
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 348/670 (51%), Gaps = 88/670 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 9 FRESAEKYPDLPAFFSKDSKKNYYPMTY--SQLYEQGVQLAEALIELGVQQRQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + VEN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFVENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MRDLIEKGKKLRANGSQKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLL 377
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L +L
Sbjct: 294 RGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVL 351
Query: 378 A----------------------------------EKLVYKKIQSAIGIS-KAGVSGGGS 402
A +K+V KI++A G KA +SGGG+
Sbjct: 352 AGVFGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKIVLSKIRAATGGQLKASISGGGA 411
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 463 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINF 529
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGP 624
GAI+VPD E++ A+ I + +L + + + LY E++ +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 625 IHVVDEPFTV 634
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|421113459|ref|ZP_15573903.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410801233|gb|EKS07407.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 681
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 348/670 (51%), Gaps = 88/670 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 9 FRESAEKYPDLPAFFSKDSKKNYYPMTY--SQLYEQGIQLAEALIELGVQQRQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + VEN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFVENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MRDLIEKGKKLRANGSQKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLL 377
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L +L
Sbjct: 294 RGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVL 351
Query: 378 A----------------------------------EKLVYKKIQSAIGIS-KAGVSGGGS 402
A +K+V KI++A G KA +SGGG+
Sbjct: 352 AGVFGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKVVLSKIRAATGGQLKASISGGGA 411
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 463 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINF 529
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGP 624
GAI+VPD E++ A+ I + +L + + + LY E++ +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 625 IHVVDEPFTV 634
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|398345147|ref|ZP_10529850.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 679
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 216/631 (34%), Positives = 335/631 (53%), Gaps = 82/631 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
L+ AE L +GVK E + L +DN W++AD G++ +GA +V RG+ + E+++I +H
Sbjct: 44 LNLAEALIDLGVKAREHVGLLADNRIEWIIADYGIILSGAADVPRGTDITDSEIVYIVSH 103
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SES + +EN + + A ++ II++ K S +P +++ YD +I G
Sbjct: 104 SESEIVFIENDKMLEKFNRNKSQLAKVKTIIIM--DKDSNSPGVLK-----LYD-LIAKG 155
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
++ R S + R I +D+ T +YTSGTTG PKGV L H N++HQ+ ++ +
Sbjct: 156 KQLRAGGSRKVEER----VAGIKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQVLNVTPM 211
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
+ + LS+LP WHV+ER Y S G YT VR+L+ DL +P +M S P +
Sbjct: 212 LKINAEARLLSILPVWHVFERVVEYVCISIGATTYYTNVRDLRQDLATVKPTFMGSAPRL 271
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYT----AFKRIYEGFCLTRNQKQP--SY 354
+E +Y+GI +I RAL ++++ ++ A R G + + + P S+
Sbjct: 272 WENIYNGIYTRI-NDPGQTPAFRRALFKLAYFFSDKNNASTRFLSGNEVDYHGRNPVKSF 330
Query: 355 ---LVALIDWLWA-----RIICAIL-------------WPLHLLA-----------EKLV 382
++ +I +L II AI +PL++++ +K+V
Sbjct: 331 FYGILMVIQYLLTGPFTLSIITAIAAYTLAPTSFGYLSFPLYIVSGLALFLNSVALDKVV 390
Query: 383 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
KI++A G + +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV++ R ++
Sbjct: 391 LSKIRTATGGNLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLII 450
Query: 442 GSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSA 489
GSVG + T ++I + + N+VL G KG+V V+G QVM+GYFKN A
Sbjct: 451 GSVGSIVPKTRLQIRN-DNNDVLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGYFKNDEA 509
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T + L DGW+NTGD+G I + L L GRAKDT+VL GENVEP+ +E
Sbjct: 510 TAKTL-VDGWMNTGDMGMINFKRT----------LTLTGRAKDTVVLLGGENVEPVPIEN 558
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLY 608
S I Q +VIGQDQ+ GAII+PD E++ AK I AD +L K I
Sbjct: 559 KLQESPYISQCMVIGQDQKNLGAIIIPDFEKLGEWAKENGIDVADREKLIENPKIIDFYR 618
Query: 609 GELRKW-TSKCSF----QIGPIHVVDEPFTV 634
E++ +K F Q+ P ++ +PF V
Sbjct: 619 KEIKNLNNAKNGFKSFEQVTPFFLITKPFEV 649
>gi|410450361|ref|ZP_11304402.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410015874|gb|EKO77965.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|456875112|gb|EMF90343.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 682
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 348/670 (51%), Gaps = 88/670 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 10 FRESAEKYPDLPAFFSKDSKKNYYPMTY--SQLYEQGVQLAEALIELGVQQRQRVGLFAD 67
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + VEN + +
Sbjct: 68 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFVENDKMLEKFNRNKSQ 127
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 128 LTNVKTLIMM--DPTSNSPGVLK------MRDLIEKGKKLRANGSQKAEER----IAAID 175
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 176 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 235
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 236 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 294
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLL 377
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L +L
Sbjct: 295 RGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVL 352
Query: 378 A----------------------------------EKLVYKKIQSAIGIS-KAGVSGGGS 402
A +K+V KI++A G KA +SGGG+
Sbjct: 353 AGVFGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGGGA 412
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 471
Query: 463 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINF 530
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 580
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGP 624
GAI+VPD E++ A+ I + +L + + + LY E++ +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 625 IHVVDEPFTV 634
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|418755411|ref|ZP_13311616.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409964206|gb|EKO32098.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
Length = 681
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 348/670 (51%), Gaps = 88/670 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A + S++N+ + S+L ++ + AE L +GV+ +++ LF+D
Sbjct: 9 FRESAEKYPDLPAFFSKDSKKNYYPMTY--SQLYEQGVQLAEALIELGVQQRQRVGLFAD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++AD G++ TGA +V RG+ + E+++I NHSE + VEN + +
Sbjct: 67 NRIEWIIADYGVILTGAADVPRGTDITDSEIVYILNHSEVEVVFVENDKMLEKFNRNKSQ 126
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ +I++ +S +P +++ ++I+ G++ R S + R I
Sbjct: 127 LTNVKTLIMM--DPTSNSPGVLK------MRDLIEKGKKLRANGSQKAEER----IAAID 174
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 175 SEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFERVV 234
Query: 264 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 235 EYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFR 293
Query: 324 RALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLHLL 377
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L +L
Sbjct: 294 RGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVL 351
Query: 378 A----------------------------------EKLVYKKIQSAIGIS-KAGVSGGGS 402
A +K+V KI++A G KA +SGGG+
Sbjct: 352 AGAFGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGGGA 411
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 463 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMINF 529
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----QIGP 624
GAI+VPD E++ A+ I + +L + + + LY E++ +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 625 IHVVDEPFTV 634
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|374584914|ref|ZP_09658006.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373873775|gb|EHQ05769.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 640
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 306/570 (53%), Gaps = 45/570 (7%)
Query: 42 SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
+R F++ ++L ++ A L +G+KP + + +F++N W+ AD +L GA
Sbjct: 42 TREGGHFQMTTYAQLREQAESLATALIDLGLKPRDHVGIFAENRLEWIQADLAVLLAGAA 101
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAE--TLCSKAAMRFIILLWGKKSS 159
+V RG+ + ++ HI HS L VEN ++ L + IL+ G+ +
Sbjct: 102 DVPRGADVTDPDIRHIVPHSGMRFLFVENTTVLEKMRRHPDLIKGVTL---ILMSGQDAD 158
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
V ++ ++I GRE R D R + SDD+ T +YTSGTTG
Sbjct: 159 V----------YAQADLIRRGRELRH----QGDRRVEEHMAGLSSDDLFTLIYTSGTTGA 204
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
PKGVMLTH N++ Q+ + VP D+ LS+LP WH++ER RG Y+ V
Sbjct: 205 PKGVMLTHANMISQLERIP--VPIRTDDRVLSILPVWHIFERVFEMIALGRGCCTYYSNV 262
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
R+L+DD++ P +M S P ++E++Y+GI + +S RR + + +S + R
Sbjct: 263 RSLRDDMKNVAPTFMASAPRLWESVYAGILTNLEKASPVRRGLFALTLSVSRRFRGALRF 322
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-S 398
+G L + S +++ LW+ + +L L +++V KKI++A G + G S
Sbjct: 323 LKGNELDITGR--SSFLSMFRALWSIVEVLLLAVPFFLLDRIVLKKIRAATGGALRGTCS 380
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GGG+LP H+DLF+ G+ V GYGLTE+SPV++ R P V G+VG T+++I D
Sbjct: 381 GGGALPYHVDLFFNDAGIPVLEGYGLTETSPVLSVRTPDLLVPGTVGPIYPDTDLRITDL 440
Query: 459 ETNEVL-------PA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
T E+L P G KG + VRG Q+M+GY+K+ +AT + L +DGW NTGD+G +
Sbjct: 441 NTGELLFTTEAGGPKRRGVKGEIHVRGPQIMKGYYKDQAATDKVL-KDGWFNTGDLGMMT 499
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
L + GR+K+TIVL GENVEP+ +E L+S IRQ++V+GQD++
Sbjct: 500 ----------YNDCLKITGRSKETIVLLNGENVEPVPIENTLLQSPYIRQLIVVGQDKKY 549
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHADASELS 599
A+IVP+ E+ K + + D LS
Sbjct: 550 LTALIVPEIEK-FPGHKEFTTLAIDPEALS 578
>gi|398335373|ref|ZP_10520078.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 635
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 305/523 (58%), Gaps = 45/523 (8%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G+KP+E +++ +DN W++ D +L +GA +V RGS ++ +++ +I +H++ + +EN
Sbjct: 62 GLKPQENVAIIADNRLEWILTDLAVLFSGAADVPRGSDATVQDMEYILSHADCRIVFIEN 121
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
F ++ + ++IL+ G P+I +E V ++ ++++ GR K +
Sbjct: 122 ANVFKKLNSIREKLTGLEYLILMDG-----TPEIFKEGKVLNFRKVLEEGRTLSKEMVLA 176
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 250
R I +D+ T +YTSGTTGNPKGVMLTH+N+L QIR++ + + D+ L
Sbjct: 177 RADR-------IEPNDLLTLIYTSGTTGNPKGVMLTHENILSQIRNIP--LGLQKEDRIL 227
Query: 251 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 310
S+LP WH++ER F+ G + YT +R+LK+D+Q +P +M S P ++E+++ GIQ
Sbjct: 228 SILPVWHIFERIFEIVSFTFGCKTYYTNIRSLKEDMQIVKPTFMASAPRLWESIFQGIQT 287
Query: 311 QIFTSSAARRVVARALIRISFAYTAFKRI-YEGFCLTRNQK---QPSYL-VALIDWLWAR 365
++ +++ + ++ + RI Y + +N++ P + V + L +
Sbjct: 288 KLQGMKGISKILFQGALKTN-------RIRYRHLAVLKNRELKLNPEFWPVTIFKKLISF 340
Query: 366 IICA-ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
II I+ P LL + +V KK++ A G + KA VSGGG+LP+H+D + AIG+ V GYG
Sbjct: 341 IILTWIVLPAKLL-DLIVLKKVRMATGGNLKASVSGGGALPLHVDELFNAIGIPVLEGYG 399
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-----PAGSKGIVKVRGSQ 478
LTE+SP+++ R P ++G+VG T+++IVD T + + P G KG + V+G Q
Sbjct: 400 LTETSPILSMRTPEELIVGTVGKIFPETQVRIVDVATGKNIYPSSNPFGKKGELIVKGPQ 459
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
VM+GY+KN AT++ L +DGW TGD+ + L + GR K+TIVLS
Sbjct: 460 VMKGYYKNAEATEKVL-QDGWFKTGDLAVLT----------ANSYLKIVGRIKETIVLSN 508
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GEN+EP+ +E S LI +V+GQD++ PG ++VP+ E +
Sbjct: 509 GENLEPVPIEAKLQESPLIEACMVVGQDKKFPGVLVVPNLENL 551
>gi|257456081|ref|ZP_05621284.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
gi|257446539|gb|EEV21579.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
Length = 640
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 305/567 (53%), Gaps = 37/567 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S++ +L FA GL +G+ +++ L +DN W A G++A GA +V RG ++ ++
Sbjct: 38 SQVFDRVLSFAGGLLSLGIVRGDRVGLIADNRKEWYHASMGIMAIGAADVPRGCDATEQD 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL-----LWGKKSSVAPDIVEEI 168
L+ I + +E + +EN + F +I + ++ +I+ + ++ DI
Sbjct: 98 LVRILSFAECTSAVIENRDQFIKILKNQQQFPLLKTLIVFDPFDIQDEELKTKGDI-SRF 156
Query: 169 PVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
++SYDEII+ G R+ D+ + +T ++AT ++TSGTTG PKGVMLTHK
Sbjct: 157 AMYSYDEIIERGTAYRQEHPDAVERELEKGADT----EVATIIFTSGTTGEPKGVMLTHK 212
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDL 286
N Q+ L V G+K + +LP WH +ER C Y I + ++Y+ L D+
Sbjct: 213 NFAVQLDDLKTRVILHPGEKAIVVLPVWHSFERLCEYVILASAAGMVYSKPVGSILLADI 272
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG---- 342
+ P SVP ++E++Y+G+ K + + ++ + + + + R G
Sbjct: 273 AKTNPALFPSVPRIWESVYTGVFKAMKQAGGIKQKLFSFFVAVGLFHAHHARNVRGQNPH 332
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 401
F +P +++ I +L + P + L LV+KKI++ +G + GVSGGG
Sbjct: 333 FAFYTKITRP--IISFIPFLLSA-------PFYALGNVLVFKKIRTKLGTGFRQGVSGGG 383
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
+LP +ID F+ AIGV V GYGLTE++PV++ R V G++G P++ T++KIVD N
Sbjct: 384 ALPPNIDAFFWAIGVSVTEGYGLTETAPVVSVRPLGHPVFGTIGKPLSCTKVKIVDDSGN 443
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
E LPAG G V +RG+ VM+GY+K T +D+DGW ++GD+G +
Sbjct: 444 E-LPAGKLGTVMIRGTSVMKGYYKRQDLTDAVIDKDGWFDSGDLGM----------KTID 492
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
G L+L GR KDTIVL GEN+EP+ +E S I Q VV+GQDQR GA+IV D+ EV
Sbjct: 493 GELILRGRKKDTIVLRGGENIEPVPIEMKLQESPFIAQAVVLGQDQRFLGALIVADEAEV 552
Query: 582 LMAAKRLSIVHADASELSKEKTISLLY 608
A I A EL + I L+
Sbjct: 553 KNYAAEQGISAASFEELLAKPEIKKLF 579
>gi|398339044|ref|ZP_10523747.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
Length = 629
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 327/622 (52%), Gaps = 82/622 (13%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+GV+ ++K+ L +DN W++AD G++ TGA NV RG+ + E+++I NHSE + +E
Sbjct: 1 MGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIE 60
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSD 189
N + + ++ +I++ +S +P +++ E+++ G+ R S
Sbjct: 61 NDKMLEKFNRNKSQLTNVKTLIMM--DPTSNSPGVLK------MQELLEKGKSLRAGGSK 112
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 249
+ R I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G +
Sbjct: 113 KAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARL 168
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LS+LP WHV+ER Y G YT VR+L+ DL +P +M S P ++E +Y+GI
Sbjct: 169 LSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIY 228
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY--------- 354
+I A + R L ++++ ++ K R +G + + P S+
Sbjct: 229 TRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQ 287
Query: 355 --------LVALIDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIG 391
L L L A L+ PL+ ++ +K+V KI++A G
Sbjct: 288 FLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYTVSGLAFVLNSFTLDKIVLAKIRAATG 347
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG +
Sbjct: 348 GQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPK 407
Query: 451 TEIKIVDAETNEVL------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
T ++I + + N VL G KG+V ++G QVM+GYFKN AT +A+ DG
Sbjct: 408 TRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DG 465
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
W+NTGD+G I + L L GRAKDT+VL GENVEP+ +E S+ I
Sbjct: 466 WMNTGDMGMINFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYIS 515
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TS 616
Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L + + LY E++ +
Sbjct: 516 QCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNT 575
Query: 617 KCSF----QIGPIHVVDEPFTV 634
K F Q+ P ++ +PF V
Sbjct: 576 KNGFKSFEQVTPFILISKPFEV 597
>gi|455790029|gb|EMF41919.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 683
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 320/629 (50%), Gaps = 78/629 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA+NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIQLGLKAREHVGVLADNRLEWILTDYAVQFSGAVNVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K SS + +I YD +++ GR
Sbjct: 106 AKIVFIENDKMLEKYNK-VKSKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLL 215
Query: 243 AE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
E D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V
Sbjct: 216 TEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRV 275
Query: 301 YETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------ 351
+E +Y+ I ++ + RRV+ + S Y A +R G + +
Sbjct: 276 WENVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLV 335
Query: 352 ----------------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
P Y + L +WL+ ++ L + +V
Sbjct: 336 IGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVL 395
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++G
Sbjct: 396 SKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIG 455
Query: 443 SVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATK 491
SVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP TK
Sbjct: 456 SVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTK 515
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 516 KTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKM 564
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGE 610
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E
Sbjct: 565 DESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKE 624
Query: 611 LRKWTS-KCSF----QIGPIHVVDEPFTV 634
+R + S K F Q+ + + +PF V
Sbjct: 625 VRSYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|183222283|ref|YP_001840279.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912333|ref|YP_001963888.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777009|gb|ABZ95310.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780705|gb|ABZ99003.1| Long-chain acyl-CoA synthetase (AMP-forming) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 629
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 202/557 (36%), Positives = 310/557 (55%), Gaps = 40/557 (7%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
+A ATR+ ++F+ + E L + + A GL + +K+++F+DNS W+
Sbjct: 19 NAFATRM--GSGVYQFKTYNE--LLTDAKNLASGLTEF-LSERDKVAIFADNSYEWIQTS 73
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
GAI+V R S + +++L+I NHSES L VEN F ++ ++ IIL
Sbjct: 74 IATTLLGAIDVPRASDVTDQDILYILNHSESKVLFVENDSVFEKVIRLEKDLEFLKEIIL 133
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKH-YKYETIGSDDIATYV 211
+ K++ ++I +F+ E++ G E RK D H ++ TI D+ T +
Sbjct: 134 FYPPKANKELK-SKKIRIFTLQELVAKGSEKRK-----EDPSDHLFQNNTIIESDLFTMI 187
Query: 212 YTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG 271
YTSGTTG PKGVMLTH N+L Q+ +L + GDK LS+LP WH++ER F S G
Sbjct: 188 YTSGTTGTPKGVMLTHGNILFQLHNL--PIRLNKGDKTLSILPIWHIFERIFEIFSLSYG 245
Query: 272 IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
Y++VR LK+DL+ +P++M S P ++E++YSGI + SS ++ + + + +
Sbjct: 246 ACTYYSSVRTLKEDLRFVKPNFMASAPRLWESIYSGILGTLNKSSRLKQKMFQVSMFFAK 305
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVAL-IDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
+ ++I G L P I +++ I ++W +L+ + LV KI+ A
Sbjct: 306 IFFHSRQIITGNVL---DIHPIVFWKFSIRYVFHLIRFFLVWIPYLVFDFLVLSKIRKAT 362
Query: 391 GISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G G VSGGG+LP H+D F+ IG+ V GYG+TE++PV+A R + GSVG
Sbjct: 363 GGELRGSVSGGGALPFHVDEFFNMIGIPVLEGYGMTETAPVLAMRTFEEIIPGSVGKIFP 422
Query: 450 HTEIKIVDAETNEV--------LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
T++++VD +T EV G KG + V+G+QVM GY+KNP AT + L DGWLN
Sbjct: 423 KTQLRLVDLQTGEVFLDTEIGKFVYGRKGEIHVKGNQVMAGYYKNPDATNKVL-VDGWLN 481
Query: 502 TGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 560
TGD+G + + HH R + GR+K+TIVL GENVEP+ +E L S I Q
Sbjct: 482 TGDLGIFTSNHHLR-----------IVGRSKETIVLLGGENVEPVPIESKILESEWIDQC 530
Query: 561 VVIGQDQRRPGAIIVPD 577
+V+GQDQ+ A++ P+
Sbjct: 531 MVVGQDQKFLSALVYPN 547
>gi|219119029|ref|XP_002180281.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408538|gb|EEC48472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 633
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 201/642 (31%), Positives = 335/642 (52%), Gaps = 90/642 (14%)
Query: 27 FTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDF-------AEGLRVIGVKPEEKLS 79
+RNC D +R C+ K++ + A + +GVKP ++
Sbjct: 22 LSRNCGD---------KRALLDEHMCDDKVDVTFAEMNTIVRKSAAVFQSLGVKPGVNVA 72
Query: 80 LFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAV-ENPEFFNRIA 138
+ +NS RWL+ D G+ G + VRG+ + +EL +IY S+S + V + P+ ++A
Sbjct: 73 ILGENSARWLMVDHGIQMAGGASAVRGADAPLDELRYIYEQSDSAGIVVVQGPKLLEKLA 132
Query: 139 ETLCSKAAMRF------IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSND 192
+K R ++ +G V D++EE+ + ++I LGR
Sbjct: 133 SDASAKGMHRLGEELTKMVDKYGLTVRVFADLLEEVQPVTDEQIPVLGR----------- 181
Query: 193 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENG 246
DD+AT VYTSGTTG PKGVMLTH NL+HQI + YD
Sbjct: 182 ------------DDLATIVYTSGTTGRPKGVMLTHGNLIHQIGHRVGTETRYDESEPLPD 229
Query: 247 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 306
+ LS+LP WH+ ER+ ++ +RG ++Y+++R K+DL +++P + + VP V E + +
Sbjct: 230 ETMLSLLPVWHITERSFELWMLARGCNVVYSSIRTFKNDLAKHRPEWAVLVPRVLEKIAT 289
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
G+Q + + S +++++ S A ++I +G+ + +QP ++ L ++
Sbjct: 290 GVQDKFSSGSLPVKLLSKLFTSTSKAAAKHRKITQGYVVG---EQPP---GAMEKLASKA 343
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 425
+ L PL+ + K+V+ K+Q+ G + +SGG +L ++ FYEA G+ + V YGLT
Sbjct: 344 LLVALSPLNAVGNKIVWSKVQNGFGGRMRTIMSGGSALSGSLEEFYEAAGLTIIVAYGLT 403
Query: 426 ESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETN------EVLPAGSKGIVKVRGS 477
E +P+I+ RR N++ G VG TE+++V E+ LPAG G+V RG
Sbjct: 404 ECAPLISHRRRDANLVTGGCVGTACIDTELRVVSPESKASTTPRPALPAGEVGVVIARGP 463
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
Q+M+GY+K+ + TK+A+D+ G+ +TGD+G + P G L+L GRAKDTIVLS
Sbjct: 464 QIMKGYYKDVAETKKAIDQFGFFDTGDLGRVNP---------ATGDLILTGRAKDTIVLS 514
Query: 538 TGENVEPLELEEAALRS-SLIRQIVVIGQDQRRPGAIIVPDKEEV----LMAAKRLSIVH 592
GENVEP LE+A L SLI Q+++ GQD R+ AI+V E+ ++ +++
Sbjct: 515 NGENVEPGPLEDAILGELSLIEQVMLTGQDGRKLTAIVVLSPSELANEGFLSKDEGALMQ 574
Query: 593 ADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 634
+++ K+ +KW Q+ ++V EPF +
Sbjct: 575 KRNEQVNDPKSTK----RFQKWE-----QVKDVYVTLEPFAM 607
>gi|294827577|ref|NP_710287.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386072580|ref|YP_005986897.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|293385420|gb|AAN47305.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353456369|gb|AER00914.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 683
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 218/629 (34%), Positives = 319/629 (50%), Gaps = 78/629 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIQLGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K SS + +I YD +++ GR
Sbjct: 106 AKIVFIENDKMLEKYNK-VKSKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLL 215
Query: 243 AE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
E D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V
Sbjct: 216 TEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRV 275
Query: 301 YETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------ 351
+E +Y+ I +I + RRV+ + S Y A +R G + +
Sbjct: 276 WENVYANIYNKINDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLV 335
Query: 352 ----------------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
P Y + L +WL+ ++ L + +V
Sbjct: 336 IGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVL 395
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++G
Sbjct: 396 SKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIG 455
Query: 443 SVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATK 491
SVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP TK
Sbjct: 456 SVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTK 515
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 516 KTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKM 564
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGE 610
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E
Sbjct: 565 DESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKE 624
Query: 611 LRKWTS-KCSF----QIGPIHVVDEPFTV 634
+R + S K F Q+ + + +PF V
Sbjct: 625 VRSYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|421124587|ref|ZP_15584844.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133743|ref|ZP_15593889.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022188|gb|EKO88967.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437718|gb|EKP86817.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 683
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 319/629 (50%), Gaps = 78/629 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIQVGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K SS + +I YD +++ GR
Sbjct: 106 AKIVFIENDKMLEKYNK-VKSKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLL 215
Query: 243 AE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
E D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V
Sbjct: 216 TEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRV 275
Query: 301 YETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------ 351
+E +Y+ I ++ + RRV+ + S Y A +R G + +
Sbjct: 276 WENVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLV 335
Query: 352 ----------------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
P Y + L +WL+ ++ L + +V
Sbjct: 336 IGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVL 395
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++G
Sbjct: 396 SKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIG 455
Query: 443 SVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATK 491
SVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP TK
Sbjct: 456 SVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTK 515
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 516 KTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKM 564
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGE 610
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E
Sbjct: 565 DESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKE 624
Query: 611 LRKWTS-KCSF----QIGPIHVVDEPFTV 634
+R + S K F Q+ + + +PF V
Sbjct: 625 VRSYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|417767938|ref|ZP_12415873.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400349383|gb|EJP01676.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
Length = 683
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 319/629 (50%), Gaps = 78/629 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIQLGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K SS + +I YD +++ GR
Sbjct: 106 AKIVFIENDKMLEKYNK-VKSKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLL 215
Query: 243 AE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
E D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V
Sbjct: 216 TEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRV 275
Query: 301 YETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------ 351
+E +Y+ I ++ + RRV+ + S Y A +R G + +
Sbjct: 276 WENVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLV 335
Query: 352 ----------------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
P Y + L +WL+ ++ L + +V
Sbjct: 336 IGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLIFNAKTLDTIVL 395
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++G
Sbjct: 396 SKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIG 455
Query: 443 SVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATK 491
SVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP TK
Sbjct: 456 SVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTK 515
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 516 KTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKM 564
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGE 610
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E
Sbjct: 565 DESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKE 624
Query: 611 LRKWTS-KCSF----QIGPIHVVDEPFTV 634
+R + S K F Q+ + + +PF V
Sbjct: 625 VRSYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|410938814|ref|ZP_11370654.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410786015|gb|EKR74966.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 683
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 222/635 (34%), Positives = 319/635 (50%), Gaps = 90/635 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIQLGLKAREHVGVLADNRLEWILTDYAIQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENP---EFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL 179
+ + +EN E +N+I L + I++ K S+ + +I YD +++
Sbjct: 106 AKIVFIENDKMLEKYNKIKSKLPNVET----IIIMDKSSAAKGKHIHKI----YD-LVEE 156
Query: 180 GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS--- 236
GR R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 157 GRSLRAKGSKKAEKR----IEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVP 212
Query: 237 --LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
L DI P D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M
Sbjct: 213 MLLTDIKPT---DSMLSILPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFM 269
Query: 295 ISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
S P V+E +Y+ I ++ + RR++ + S Y A +R G + ++
Sbjct: 270 ASAPRVWENVYANIYNKVNDPKQTPPIRRILFKLAYFFSKHYNASRRFLNGLEVDYEKRN 329
Query: 352 ----------------------------------PSYLVALIDWLWARIICAILWPLHLL 377
P Y V L +WL+ + L
Sbjct: 330 ILKSLAIGIKSLIILLLTGPFTLSAISILAYLTLPVYRVHLPNWLFFSLAGLGLVFNAKT 389
Query: 378 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
+ +V KI+ A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 390 LDTIVLSKIRGATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPF 449
Query: 437 TCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFK 485
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+K
Sbjct: 450 VKPIIGSVGFLVPKSELIIKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYK 509
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
NP TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+
Sbjct: 510 NPEVTKKTII-DGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPV 558
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTI 604
+E S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I
Sbjct: 559 PIENKMDESPFIKQSMVIGQDQKVLGAIIVPDIEHLAVWCKENGIDSSKIDEIIKNPKVI 618
Query: 605 SLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ I + +PF V
Sbjct: 619 DFYKKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|417763141|ref|ZP_12411124.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417770357|ref|ZP_12418267.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417774734|ref|ZP_12422598.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417785227|ref|ZP_12432932.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418669903|ref|ZP_13231277.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418674006|ref|ZP_13235316.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680806|ref|ZP_13242044.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418689298|ref|ZP_13250420.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418698387|ref|ZP_13259364.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418705067|ref|ZP_13265932.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418707727|ref|ZP_13268547.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418713238|ref|ZP_13273965.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726949|ref|ZP_13285548.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|418730735|ref|ZP_13289211.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421117442|ref|ZP_15577805.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421123073|ref|ZP_15583355.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|400327456|gb|EJO79707.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400361443|gb|EJP17409.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941197|gb|EKN86831.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409947911|gb|EKN97905.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409952016|gb|EKO06530.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409959696|gb|EKO23462.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410011153|gb|EKO69281.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410343817|gb|EKO95012.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410575576|gb|EKQ38594.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410578989|gb|EKQ46840.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410754193|gb|EKR15848.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410762530|gb|EKR28691.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410764918|gb|EKR35620.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410772148|gb|EKR47342.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774297|gb|EKR54305.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410790321|gb|EKR84015.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455666916|gb|EMF32288.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|456824239|gb|EMF72676.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 683
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 319/629 (50%), Gaps = 78/629 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIQLGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K SS + +I YD +++ GR
Sbjct: 106 AKIVFIENDKMLEKYNK-VKSKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLL 215
Query: 243 AE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
E D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V
Sbjct: 216 TEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRV 275
Query: 301 YETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------ 351
+E +Y+ I ++ + RRV+ + S Y A +R G + +
Sbjct: 276 WENVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLV 335
Query: 352 ----------------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
P Y + L +WL+ ++ L + +V
Sbjct: 336 IGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVL 395
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++G
Sbjct: 396 SKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIG 455
Query: 443 SVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATK 491
SVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP TK
Sbjct: 456 SVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTK 515
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 516 KTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKM 564
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGE 610
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E
Sbjct: 565 DESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKE 624
Query: 611 LRKWTS-KCSF----QIGPIHVVDEPFTV 634
+R + S K F Q+ + + +PF V
Sbjct: 625 VRSYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|374621808|ref|ZP_09694338.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373940939|gb|EHQ51484.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 629
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 324/601 (53%), Gaps = 44/601 (7%)
Query: 24 FRVFTRNCV---DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSL 80
F F +C D +A R+ FRV E K +++L A + ++ +K+ L
Sbjct: 8 FHTFLDSCEHFNDRLAFIYRVG--EEEFRVTYE-KFFEDVLLLARAFKAGKIRRGDKVFL 64
Query: 81 FSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAET 140
SDN W+V D + A GA++V RG + + E+ +I NHS + + VE + +
Sbjct: 65 LSDNRYAWIVTDMALQALGAVSVPRGCDTPASEIEYIINHSGAEFVIVETDAVYEAHQDL 124
Query: 141 LCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII-DLGRESRKAFSDSNDARKHYKY 199
L S +++ +K + +V SY EI+ D E R A
Sbjct: 125 LHSLKPRGVFVMVGAEKHTWFHKVV------SYTEILADRTIEPRDIEWFKGLA------ 172
Query: 200 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 259
E I ++D+ T +YTSGTTG PKGVML H N++H IR+L ++ D ++S+LP WH++
Sbjct: 173 EPIQTEDLLTIIYTSGTTGTPKGVMLDHGNIMHNIRTLPPLIALNETDVWVSILPSWHIF 232
Query: 260 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 319
ER Y +RG L+Y+++R DL+ Y+P + +VP V+E LY+ I ++ +
Sbjct: 233 ERTAEYIGIARGSCLVYSSIRTFAQDLETYRPTLVATVPRVWEALYTRITTELKKKDPKK 292
Query: 320 RVVARALIRISFAYTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICAILWPLH 375
V L+R+S Y +RI R+Q +P L D A + +L+ +
Sbjct: 293 ARVFSLLVRVSATYRRNQRIL------RDQLPVFAKPPVLRRAGDKTRAALTNVLLFLPN 346
Query: 376 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 434
LLA K ++ +Q G KA +SGGGSLP ++D + +AIG+++ YG+TE SP IA R
Sbjct: 347 LLARK-KFRLVQEKFGGRLKAAISGGGSLPPYLDEWIDAIGIRIINAYGMTECSPGIAGR 405
Query: 435 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 494
C+V G++G + TE++IVDA T++ LP G++G ++VRG+QV +GY+ N A QA
Sbjct: 406 GLGCHVFGTLGPAVGETELRIVDA-TDQPLPPGTEGEIQVRGAQVFKGYYDNDIANAQAF 464
Query: 495 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 554
DG+L TGD+G + G LV+ GRAKD IVL++GENV+P +E
Sbjct: 465 TNDGFLRTGDLGRMT----------LTGELVITGRAKDIIVLASGENVDPTNIEATLSMF 514
Query: 555 SLIRQIVVIGQDQRRPGAIIVPDKEEVL-MAAKRLSIVHADASELSKEK-TISLLYGELR 612
++ V++GQD++ GA+IVPD E++ ++ + + +A E K+K + L GE+
Sbjct: 515 PFVKDAVLVGQDKKGLGALIVPDMEKLREFVQEKYNQIVGEADEALKDKHLLDRLRGEMN 574
Query: 613 K 613
K
Sbjct: 575 K 575
>gi|456864747|gb|EMF83139.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 683
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 218/632 (34%), Positives = 313/632 (49%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L IG+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIQIGLKAREYVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYILQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + F + + + SK I++ K S+ + +I YD + E
Sbjct: 106 AKIIFIENDKMFEKYNK-VKSKLPKVETIVIMDKASTAKGKNIHKI----YDLV-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
KA + + E I +D+ T +YTSGTTG PKGVMLTH N++HQ + +VP
Sbjct: 156 EGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLTHSNMVHQ---MVHVVP 212
Query: 243 A-----ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
+ D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 213 MLLTDIKTTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLSGLEVDYENRNILK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P+Y + L W + I L +
Sbjct: 333 SIAIGTKSLIVLLLTGPFTLSAMTILAYLALPTYGIRLPSWFFLMIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 VVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E + + K I + EL K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTLWCKENGIDSSKIDELIKNPKVIEFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ I + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHIILTKKPFEV 653
>gi|397645678|gb|EJK76946.1| hypothetical protein THAOC_01260 [Thalassiosira oceanica]
Length = 777
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 309/587 (52%), Gaps = 65/587 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S++E ++ A+ + +GV +++ +NS WL+AD G+ G + VRG+ + EE
Sbjct: 133 SEVELKVRKSAQVFKELGVTKGVNVAILGENSAMWLLADHGIQLAGGASAVRGADAPLEE 192
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP----------- 162
L +IY HS+S +AV ++ + L + A R + L + S P
Sbjct: 193 LRYIYEHSDSAGVAVVQDI---KLVQKLATDAKARGVGSLGLQNESHGPIKTVILMHRGK 249
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETI---GSDDIATYVYTSGTTGN 219
E+I +D+ + SD D+ Y + D++T VYTSGTTG
Sbjct: 250 ATDEDIKAIGTANNVDI-----RVLSDLMDSTSPAIYNELPPMAKSDLSTIVYTSGTTGK 304
Query: 220 PKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIE 273
PKGVML+H NLLHQ YD G+ LS+LP WH+ ER F+ SRG
Sbjct: 305 PKGVMLSHGNLLHQTGHRLAPTKPYDESEPLPGELMLSLLPVWHITERTFELFMLSRGCY 364
Query: 274 LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 333
++++ +R K+DL +++P +++ VP V E + G+Q + AA VV + L+++
Sbjct: 365 VVFSGIRWFKNDLAKHRPQWLVLVPRVLEKVALGVQDKF----AAGSVVVKGLVKLFTKT 420
Query: 334 TAFK----RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 389
+ K +I G + + P D + + +I L PL+ + KLV+ K+Q
Sbjct: 421 STLKNKHSKIRNGLVVGSDAPTP------FDGIVSSLIVKALAPLNFVGNKLVWSKVQDG 474
Query: 390 I-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL--GSVGH 446
G K+ +SGG +L ++ FYE +G+ + VGYGLTE +P++A RR CN++ G VG
Sbjct: 475 FGGRQKSIISGGSALAGSLETFYENVGIDILVGYGLTECAPLLAHRRSDCNLVTAGCVGF 534
Query: 447 PINHTEIKIVDAETNE------VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 500
P + TE+++VD E+ LP G G+V RG QVM+GY+KN AT A+D G+
Sbjct: 535 PCSDTELRVVDPESKAEDGERISLPIGQAGVVIGRGPQVMKGYYKNAEATSNAIDRFGFF 594
Query: 501 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQ 559
+TGD+G I P G L+L GRAKDTIVLS GEN+EP +E+A L SSL+ Q
Sbjct: 595 DTGDLGRINP---------LTGDLILTGRAKDTIVLSNGENIEPQPIEDAILSHSSLVEQ 645
Query: 560 IVVIGQDQRRPGAIIV--PDK--EEVLMAAKRLSIVHADASELSKEK 602
+++ GQD R AI V P+ E L+ A RL + D ++ K
Sbjct: 646 VMLSGQDGRSLLAITVLNPNALVEAGLLDASRLKAIMNDYDAVNNPK 692
>gi|392403501|ref|YP_006440113.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611455|gb|AFM12607.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 645
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 204/611 (33%), Positives = 336/611 (54%), Gaps = 43/611 (7%)
Query: 39 IRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT 98
+R + F+ ++LE+E+ A GL IGVKP++ + L +D S W+ A+ +
Sbjct: 28 VRFREGSEEFKTLTYAQLEKEVNLVAAGLAAIGVKPKDHIGLIADVSHYWITANLAIQLN 87
Query: 99 GAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRI-AETLCSKAAMRFIILLWGKK 157
GA +V RG+ S+ E+ +I +HS S + V N + +I K ++ I+L +K
Sbjct: 88 GAADVPRGTDSTGPEIAYILDHSGSNVVFVHNADQVKKIETALKKFKLKVKKYIVLNDQK 147
Query: 158 SSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTT 217
++ +++ + + E L ++ KA +D + + D++ VYTSGTT
Sbjct: 148 TAKGSNVMTLSELKAEGE--KLVKKGGKALADFES-----RAGKVAPSDLSCLVYTSGTT 200
Query: 218 GNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT 277
G PKGVML+H N Q+R++ +++ D L++LPPWHV+ R + G + YT
Sbjct: 201 GEPKGVMLSHGNFASQMRTIPEVLKIGPTDSGLTLLPPWHVFGRITEMMFIAIGASITYT 260
Query: 278 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
++++ DD++ +P Y+ +VP ++E +Y+ I + A + + + Y F
Sbjct: 261 DIKHIGDDMRSIKPTYVPAVPRIWEGIYNKIIGNV--KKAGKEPIFNKFKAAALKYNHFV 318
Query: 338 RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPL-HLLAEKLVYKKIQSAIGIS- 393
+ LT +K P +V+ I + AI+W + L + LV+KK+ +A G +
Sbjct: 319 SM-----LTGKEKLPIGRNIVSAIGARIVGLFGAIVWFIPKKLGDILVFKKVLAATGGNL 373
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
KA +SGGG+LP +ID F+ AIGV++ GYGLTE+SPV++ RR + G+VG I HTE
Sbjct: 374 KASLSGGGALPSYIDDFFRAIGVRILEGYGLTETSPVLSVRRMERLIPGTVGPLIAHTEY 433
Query: 454 KIVDAETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
K++D E +V +P G+KG + VRG QVMQGY+KNP T L DGW NTGD+ + +
Sbjct: 434 KLIDLEGRDVTRIP-GAKGTLHVRGPQVMQGYYKNPKKTADVLTPDGWFNTGDL--VVFN 490
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI----GQDQ 567
HS G + + GR+KDT+VL GENVEP +EE S I ++++ G+DQ
Sbjct: 491 HS--------GEISIVGRSKDTLVLVGGENVEPTPIEEKMKESEFIDHVMLVSRAFGEDQ 542
Query: 568 RRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSF----Q 621
+ GA+IVP+ + + AK+ + V D + L K+ + +Y E+ K+ S+ F +
Sbjct: 543 KVLGALIVPNADNLADWAKK-NGVSGDFAALIKDPKVHAMYRHEINKYINSENGFKNFEK 601
Query: 622 IGPIHVVDEPF 632
+G ++ +PF
Sbjct: 602 VGVFTLLKKPF 612
>gi|398340726|ref|ZP_10525429.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
gi|418678481|ref|ZP_13239755.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421088407|ref|ZP_15549232.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|421129505|ref|ZP_15589705.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400321671|gb|EJO69531.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003038|gb|EKO53487.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410358880|gb|EKP05989.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 683
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 221/634 (34%), Positives = 321/634 (50%), Gaps = 88/634 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIELGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + II++ K SS + +I YD +I+ GR
Sbjct: 106 AKIVFIENDKMLEKYNKVKSKLPKVETIIIM-DKSSSAKGKHIHKI----YD-LIEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----L 237
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ L
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLL 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
DI P D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S
Sbjct: 216 TDIKPT---DSMLSILPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
P V+E +Y+ I ++ + RR++ + S Y A +R G L + + +
Sbjct: 273 PRVWENVYANIYNKVNDPKQTPTIRRILFKLAYFFSKHYNASRRFLNG--LEVDYENRNI 330
Query: 355 LVALIDWLWARIICAILWPLHLLA------------------------------------ 378
L +L+ + + II + P L A
Sbjct: 331 LKSLVIGIKSLIILLLTGPFTLSAISILAYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTL 390
Query: 379 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 437
+ +V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 391 DTIVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFV 450
Query: 438 CNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKN 486
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+KN
Sbjct: 451 KPIIGSVGFLVPKSELIIKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKN 510
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
P TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+
Sbjct: 511 PEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVP 559
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTIS 605
+E S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I
Sbjct: 560 IENKMDESPFIKQSMVIGQDQKVLGAIIVPDIEHLSVWCKENGIDPSKTDEIIKNPKVID 619
Query: 606 LLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ + + +PF V
Sbjct: 620 FYKKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|418693568|ref|ZP_13254618.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421106608|ref|ZP_15567172.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409958594|gb|EKO17485.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410008074|gb|EKO61749.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 683
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 218/632 (34%), Positives = 316/632 (50%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIELGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + II++ K SS + +I YD +I+ GR
Sbjct: 106 AKIVFIENDKMLEKYNKVKSKLPKVETIIIM-DKSSSAKGKHIHKI----YD-LIEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----L 237
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ L
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLL 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
DI P D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S
Sbjct: 216 TDIKPT---DSMLSILPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + RR++ + S Y A +R G + +
Sbjct: 273 PRVWENVYANIYNKVNDPKQTPTIRRILFKLAYFFSKHYNASRRFLNGLEVDYENRNIFK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P Y L +W++ + L +
Sbjct: 333 SLVIGIKSLIILLLTGPFTLSAISILAYLTLPVYGARLPNWIFFSLAGLGLVFNAKTLDT 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELIIKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDQKVLGAIIVPDIEHLSVWCKENGIDPSKTDEIIKNPKVIDFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ + + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|421087474|ref|ZP_15548310.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104138|ref|ZP_15564733.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410365590|gb|EKP20983.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429723|gb|EKP74098.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 683
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 318/629 (50%), Gaps = 78/629 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIQLGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K SS + +I YD +++ GR
Sbjct: 106 AKIVFIENDKMLEKYNK-VKSKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLL 215
Query: 243 AE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
E D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M P V
Sbjct: 216 TEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMAFAPRV 275
Query: 301 YETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------ 351
+E +Y+ I ++ + RRV+ + S Y A +R G + +
Sbjct: 276 WENVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLV 335
Query: 352 ----------------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
P Y + L +WL+ ++ L + +V
Sbjct: 336 IGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVL 395
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++G
Sbjct: 396 SKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIG 455
Query: 443 SVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATK 491
SVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP TK
Sbjct: 456 SVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTK 515
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 516 KTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKM 564
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGE 610
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E
Sbjct: 565 DESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKE 624
Query: 611 LRKWTS-KCSF----QIGPIHVVDEPFTV 634
+R + S K F Q+ + + +PF V
Sbjct: 625 VRSYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|384108995|ref|ZP_10009881.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383869439|gb|EID85052.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 643
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/604 (31%), Positives = 322/604 (53%), Gaps = 35/604 (5%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
+N F + Q LDF GL +G+K E + L SDN W AD G+++ GA++V
Sbjct: 31 KNGDFEPITYRTMYQTGLDFGAGLLDLGLKRTEPIGLISDNCPEWQQADIGVISIGAVDV 90
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
RG ++ +L I +E +N +I A++ II L D
Sbjct: 91 PRGCDATLIDLEQILAITECKFCIAQNNSQVKKIMSLKEKLPALKIIIALEDDIKDEVRD 150
Query: 164 IVE--EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
+ E+ ++++ ++++ G++ R D +A + E +D+AT ++TSGTTG PK
Sbjct: 151 ACKSGEVELYTFTQLVNSGKKWRVEHKDEIEA----EVEKGTGEDLATIIFTSGTTGTPK 206
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GVMLTHKN L Q+ + + + GD+ LS+LP WHV+ER Y I +G + Y+
Sbjct: 207 GVMLTHKNFLAQLDEIPERIYINPGDRALSVLPVWHVFEREVEYVILIQGGAICYSKPIG 266
Query: 282 --LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR- 338
L D ++ PH + +VP V+E +Y G+ K++ + + + ++ + A +R
Sbjct: 267 SILLADFKKLNPHLLPAVPRVFEAVYDGVTKKMRKTGGLVLKLFNFFVGVAKIHKAMQRK 326
Query: 339 -IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
+ C T + +++ ++ W +++WPL+ L + L+++KI+ +G + + G
Sbjct: 327 MFNQNPCFTAYRPVLWWILFILPW-------SLMWPLYWLGDLLIFRKIKVMLGSNFRVG 379
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
++GGG+ P +ID F+ AIGV++ GYGLTE++P++A R + ++G PI + +IV
Sbjct: 380 IAGGGAYPKNIDEFFWAIGVEIVEGYGLTETAPIVAVRPIAAPIYRTIGSPIRGVQARIV 439
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
D + VL G +GI++++G VM+GY+K P T++ + DGWL+TGD+ H+
Sbjct: 440 DMD-GYVLERGQQGILQIKGPTVMKGYYKRPDLTEKVMTVDGWLDTGDLAVFTIHNE--- 495
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
L ++GR KDTIVL GEN+EPL +E S I+Q VV+GQD+R A+I+
Sbjct: 496 -------LQIKGRIKDTIVLRGGENLEPLPIEMKLSESRFIKQAVVLGQDKRYLAALILV 548
Query: 577 DKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSFQ----IGPIHVVDE 630
D++E+ A I + L I LY GE+ +SK F+ I ++ +
Sbjct: 549 DEDEIKNYAAENGIQYDTYENLLASNGIQSLYEGEIANLISSKNGFKMFERINKFTLITK 608
Query: 631 PFTV 634
PF V
Sbjct: 609 PFEV 612
>gi|398336768|ref|ZP_10521473.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 681
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 210/637 (32%), Positives = 330/637 (51%), Gaps = 82/637 (12%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L ++ + AE L +GV+ +++ L +DN W+VAD G++ TGA +V RG+ + E+
Sbjct: 38 QLYEQGIQLAEALIELGVQQRQRVGLLADNRIEWIVADYGVILTGAADVPRGTDITDSEI 97
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++I NHSE + +EN + + ++ +I++ +S AP V
Sbjct: 98 VYILNHSEVEVVFIENDKMLEKFNRNKSQLNNVKTLIMM--DPASSAPG------VLKMQ 149
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 150 DLIEKGKSLRAGGSKKAEER----IAAIQPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQV 205
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
++ ++ + + LS+LP WHV+ER Y G YT VR+L+ DL +P +M
Sbjct: 206 NNVSPMLKIKADARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATVKPTFM 265
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGF---CLTR 347
S P ++E +Y+GI +I A + R L ++++ +++ K R +G + R
Sbjct: 266 GSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSSKKNQAVRFLKGIEVDYIGR 324
Query: 348 NQ----------------KQPSYLVALIDWLWA-------RIICAILWPLHLLA------ 378
N P L L L A + + L+ + LA
Sbjct: 325 NPIGSLFYGILMFVQLLLTGPFTLTVLAGALGAYFAGTELHFLTSPLYTISGLAVLLNSF 384
Query: 379 --EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 435
+++V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 385 TLDRIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPVISVRT 444
Query: 436 PTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGY 483
++GSVG + T ++I + + N VL G KG+V ++G QVM+GY
Sbjct: 445 FEKLIIGSVGVIVPKTRLQIRN-DNNGVLTEIDETGNITQGKLGLKGVVFIKGPQVMKGY 503
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
FKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL GENVE
Sbjct: 504 FKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLGGENVE 552
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 603
P+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK + +L +
Sbjct: 553 PVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGVNETSNEKLIENPK 612
Query: 604 ISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 634
+ LY E++ +K F Q+ P ++ +PF V
Sbjct: 613 VYDLYRKEIKALNNTKNGFKSFEQVTPFILIAKPFEV 649
>gi|45656005|ref|YP_000091.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599238|gb|AAS68728.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 685
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 318/629 (50%), Gaps = 78/629 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 48 LAEALIQLGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 107
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K SS + +I YD +++ GR
Sbjct: 108 AKIVFIENDKMLEKYNK-VKSKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRS 161
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++
Sbjct: 162 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLL 217
Query: 243 AE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
E D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M P V
Sbjct: 218 TEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMAFAPRV 277
Query: 301 YETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------ 351
+E +Y+ I ++ + RRV+ + S Y A +R G + +
Sbjct: 278 WENVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLV 337
Query: 352 ----------------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
P Y + L +WL+ ++ L + +V
Sbjct: 338 IGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVL 397
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++G
Sbjct: 398 SKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIG 457
Query: 443 SVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATK 491
SVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP TK
Sbjct: 458 SVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTK 517
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 518 KTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKM 566
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGE 610
S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K K I E
Sbjct: 567 DESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKE 626
Query: 611 LRKWTS-KCSF----QIGPIHVVDEPFTV 634
+R + S K F Q+ + + +PF V
Sbjct: 627 VRSYNSTKTGFKSFEQVQHVILAKKPFEV 655
>gi|408792234|ref|ZP_11203844.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463644|gb|EKJ87369.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 682
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 332/642 (51%), Gaps = 75/642 (11%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ +L ++ L AE L +GVK E + + +DN W++AD +L GA NV RGS
Sbjct: 31 YQALTYKELYEDGLALAEALIELGVKAREHVGVLADNRMEWIIADCAVLTAGAANVPRGS 90
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ E+++I NHSE+ + VEN + + + +++ +I++ K + +
Sbjct: 91 DITDSEIVYILNHSEAKVVFVENDKVYEKYKNNKSQVKSVKTVIIM-DKDTKLKSGA--- 146
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ + ++++ GR+ R + R I DD+ T +YTSGTTG PKGVML H
Sbjct: 147 -GILHFYDLLEQGRDMRAKGKREAEKR----MAGIKPDDLYTLIYTSGTTGMPKGVMLMH 201
Query: 228 KNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 286
N++HQ+ + + D+ LS+LP WH++ER YF G YT V L++D+
Sbjct: 202 SNMIHQMHYVVPRVAKVSPDDRMLSILPVWHIFERVVEYFAIINGGSTYYTKVTELRNDI 261
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRI---- 339
Q+ +P +M S P V+E++Y+GI +I + RR + + S Y A R
Sbjct: 262 QKARPTFMASAPRVWESIYNGIYTRINDPKQTPPVRRFLFKVAYFFSKHYHAAVRFLKGW 321
Query: 340 ---YEG-----------FCLTRNQKQPSYLVALIDWLWARII----CAILWPLHLLA--- 378
YEG F + + + V+++ L + + + PL+++A
Sbjct: 322 EVDYEGRNIIQSLGLSLFSIIKLLLTGPFTVSILSILAVQFVLPEESSFKTPLYVVAGLG 381
Query: 379 --------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
+++V KI+ A G +A +SGGG+L H+D F+ IG+ V GYG+TE+ P
Sbjct: 382 VLFNSFTLDRIVLAKIRQATGGHLRATLSGGGALQKHVDAFFMDIGITVLEGYGMTETGP 441
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKI----------VDAETNEVL-PAGSKGIVKVRGSQ 478
VI+AR ++GSVG + ++++I +D + N + G KG+V ++G Q
Sbjct: 442 VISARTFDRPIMGSVGDIVPLSQVQIRDDAGNVLCHIDDKKNIIFGKLGVKGVVHIKGPQ 501
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
VM+GY+KNP TK+ + D W+NTGDIG I L L GRAKDTIVL
Sbjct: 502 VMKGYYKNPETTKKTI-VDNWMNTGDIGMI----------NFKKTLTLTGRAKDTIVLLG 550
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
GENVEP+ +E S+ I+Q +++GQDQ+ GAIIVPD + ++ A+ I + +L
Sbjct: 551 GENVEPVPIENKIDESTYIKQSMIVGQDQKVLGAIIVPDFDALIPWAEENGISEKNPEKL 610
Query: 599 -SKEKTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
+ K + E+R + S K F Q+ + ++ +PF V
Sbjct: 611 ITNPKVVDFYKKEVRNFNSVKTGFKNFEQVQYVTLITKPFEV 652
>gi|418744637|ref|ZP_13300990.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|418753073|ref|ZP_13309329.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409966756|gb|EKO34597.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410794519|gb|EKR92421.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 683
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 313/632 (49%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L IG+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIDIGLKAREHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYILQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + ++ + + II++ K S+ + +I YD I E
Sbjct: 106 AKIVFIENDKMLDKFNKVKSKLPKVETIIVM-DKASAAKGKNIHKI----YDLI-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP
Sbjct: 156 EGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVP 212
Query: 243 -----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
+ D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 213 MLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P+Y V L +WL+ I L +
Sbjct: 333 SVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRLPNWLFFTIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N E+L G KG+V V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ I + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|390940643|ref|YP_006404380.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
gi|390193750|gb|AFL68805.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
Length = 629
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 328/622 (52%), Gaps = 40/622 (6%)
Query: 24 FRVFTRNCVDAVATRIRI-SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFS 82
F +F R C + + I + F V E KL +++L A + + + K+
Sbjct: 9 FHMFLRTCEENREKKAFIYTVAQTEFEVSYE-KLFEDVLVLARAFKAKKITKKSKVMFVC 67
Query: 83 DNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLC 142
DN W+V D +++ GAI + RG + S+EL I NHS + VEN + + R L
Sbjct: 68 DNRYEWMVTDLALVSLGAIGIPRGCDTPSQELAFILNHSGAEFFIVENEQMYQRYEAILP 127
Query: 143 SKAAMRFIILLWGKKSSVAPDIVEEIP-VFSYDEIIDLGRESRKAFSDSNDARKHYKYET 201
+ FI+ AP + + ++SY +I+ + R +D +A + E
Sbjct: 128 ASLEAIFIV--------EAPSVHSFLSNLYSYQDIL----KDRAIHTDEIEAFIQSQ-EA 174
Query: 202 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 261
+ ++DI T +YTSGTTG PKGV L+H+N+++ +R + ++ ++ D ++S+LP WH++ER
Sbjct: 175 LDAEDIVTIIYTSGTTGTPKGVPLSHENIMYNVREIPPLIALQSTDMWVSILPSWHIFER 234
Query: 262 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 321
A Y SRG +Y++++ DL++Y+P + +VP ++E++Y+ I + + A +
Sbjct: 235 AAEYVALSRGCCTVYSSIKTFAADLEQYKPTIVATVPRLWESMYTKINTTLEKTDAKKAK 294
Query: 322 VARALIRISFAYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 379
+ + LI IS AY KR+ E C K+PS+ V + + A + C L+P + +A+
Sbjct: 295 IFKKLIAISIAYKRAKRVIDDELPCF----KKPSFFVTCKEKIVAYLTCFFLYPFYSIAQ 350
Query: 380 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
K + + G + VSGGG+LP +D + +AIG+++ YG++E +PVI+ R CN
Sbjct: 351 KKLALVQEKFGGRLRLAVSGGGALPDFLDAWIDAIGIRIVNAYGMSECAPVISGRALQCN 410
Query: 440 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 499
++G P+ T +KIV E L AG G + V+G QVM GY+ NP ++ EDG+
Sbjct: 411 TFSTLGLPVKGTTLKIVTKE-GASLDAGEIGEIWVKGEQVMHGYYNNPEENAKSFSEDGF 469
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 559
TGD+G + G L++ GR+K+ IVL+ GENV+P +E I
Sbjct: 470 FKTGDLGKLT----------LKGELIITGRSKEIIVLANGENVDPSRIESTLSMLPFISD 519
Query: 560 IVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTISLLYGEL-----R 612
+++G ++ GA+IVPD E++ +A +VH + + ++ L E+ +
Sbjct: 520 AILVGHTKKGLGALIVPDFEKLKEYVAVNFDKVVHTIEQVMEDQHIVAKLKSEMNAMLHQ 579
Query: 613 KWTSKCSFQIGPIHVVDEPFTV 634
K K ++ IH +D+ FTV
Sbjct: 580 KEGFKPFEKLQNIHFLDQEFTV 601
>gi|359684409|ref|ZP_09254410.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
gi|421112436|ref|ZP_15572893.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410802081|gb|EKS08242.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|456875451|gb|EMF90652.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 683
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 316/632 (50%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L IG+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIDIGLKAREHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYILQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + ++ + + II++ K S+ + +I YD I E
Sbjct: 106 AKIVFIENDKMLDKFNKVKSKLPKVETIIVM-DKASAAKGKNIHKI----YDLI-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP
Sbjct: 156 EGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVP 212
Query: 243 -----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
+ D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 213 MLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILK 332
Query: 352 ------PSYLVALIDWLWARIICAIL--------------WPLHLLA-----------EK 380
S +V L+ + AIL WP ++A +
Sbjct: 333 SVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRLPGWPFLMIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N E+L G KG+V V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ I + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|422005407|ref|ZP_16352593.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417255906|gb|EKT85355.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 683
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 213/632 (33%), Positives = 313/632 (49%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L IG+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIDIGLKAREHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYILQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + ++ + + II++ K S+ + +I YD + E
Sbjct: 106 AKIVFIENDKMLDKFNKVKSKLPKVETIIVM-DKASAAKGKNIHKI----YDLV-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP
Sbjct: 156 EGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVP 212
Query: 243 -----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
+ D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 213 MLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P+Y V L +WL+ I L +
Sbjct: 333 SVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRLPNWLFFTIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N E+L G KG+V V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ I + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|449111695|ref|ZP_21748264.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|449113498|ref|ZP_21750003.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
gi|448956966|gb|EMB37719.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|448959708|gb|EMB40427.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
Length = 616
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 302/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 6 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 65
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 66 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHLAEIPLLESIISIDNVDFKKLEEE 125
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 126 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 181
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 182 KGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 241
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 242 GSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKR 301
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ ++C + PL+ + + L+Y+ I+ G +A
Sbjct: 302 RVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLYYIGDLLIYRAIRKKFGKCFRA 354
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 355 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 414
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
+D E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 415 IDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 465
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 466 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIV 523
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 524 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|410448177|ref|ZP_11302263.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410018076|gb|EKO80122.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
Length = 683
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 316/632 (50%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L IG+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIDIGLKAREHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYILQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + ++ + + II++ K S+ + +I YD + E
Sbjct: 106 AKIVFIENDKMLDKFNKVKSKLPKVETIIVM-DKASAAKGKNIHKI----YDLV-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP
Sbjct: 156 EGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVP 212
Query: 243 -----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
+ D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 213 MLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILK 332
Query: 352 ------PSYLVALIDWLWARIICAIL--------------WPLHLLA-----------EK 380
S +V L+ + AIL WP ++A +
Sbjct: 333 SVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRFPGWPFLIIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N E+L G KG+V V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ I + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|449102428|ref|ZP_21739177.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
gi|448966400|gb|EMB47056.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
Length = 616
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 302/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 6 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 65
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 66 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHLAEIPLLESIISIDNVDFKKLEEE 125
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 126 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 181
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 182 KGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 241
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 242 GSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKR 301
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ ++C + PL+ + + L+Y+ I+ G +A
Sbjct: 302 RVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLYYIGDLLIYRAIRKKFGKCFRA 354
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 355 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 414
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
+D E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 415 IDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 465
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 466 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIV 523
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 524 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|42527248|ref|NP_972346.1| AMP-binding protein [Treponema denticola ATCC 35405]
gi|41817672|gb|AAS12257.1| AMP-binding enzyme family protein [Treponema denticola ATCC 35405]
Length = 641
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 302/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 31 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 90
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 91 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHLAEIPLLESIISIDNVDFKKLEEE 150
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 151 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 206
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 207 KGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 266
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 267 GSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKR 326
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ ++C + PL+ + + L+Y+ I+ G +A
Sbjct: 327 RVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLYYIGDLLIYRAIRKKFGKCFRA 379
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 380 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 439
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
+D E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 440 IDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 490
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 491 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIV 548
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 549 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 581
>gi|449123801|ref|ZP_21760123.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
gi|448944054|gb|EMB24936.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
Length = 641
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 304/571 (53%), Gaps = 27/571 (4%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG KP++ + L +DN WL A G++ GA +V
Sbjct: 31 DKEFKSLSYKELYEISLDFAAGLLSIGAKPKDHIGLIADNRKEWLHASFGIMNIGAADVP 90
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ + + II + KK
Sbjct: 91 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHMAEIPLLESIISIDNVDFKKLEEE 150
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 151 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 206
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV ++H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 207 KGVTMSHRNFMTQLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 266
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + + + KR
Sbjct: 267 GSILLADMLKINPTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFVDVGIKTMRLKR 326
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGV 397
G C QK+ ++ ++ L ++C + P++ + + L+Y+ I+ G KAGV
Sbjct: 327 RVTGQC-PHFQKRSKFIYPILAIL--PLLC--IAPMYYIGDLLIYRTIRKKFGKCFKAGV 381
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGGG+LP ++D F+ A+ + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 382 SGGGALPPNVDEFFWAVRINVMEGYGITETAPVISVRPMPRPVFGTLGKPLACFESKIID 441
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
NE LP KG++ V+G V +GY+K+P T + +D+DGW +TGD+
Sbjct: 442 KNGNE-LPHNRKGLLLVKGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI---------- 490
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 491 KTIDGELILKGRRKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVH 550
Query: 578 KEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + SEL + + +Y
Sbjct: 551 KENLQAWAANNGLRNVPVSELVHDSNVQKMY 581
>gi|449109188|ref|ZP_21745826.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
gi|449119875|ref|ZP_21756266.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|449122271|ref|ZP_21758615.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948751|gb|EMB29584.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948874|gb|EMB29704.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|448959834|gb|EMB40552.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
Length = 616
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 302/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 6 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 65
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 66 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLAHLAEIPLLESIISIDNVDFKKLEEE 125
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 126 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 181
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 182 KGVTMTHRNFMTQLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 241
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 242 GSVLLADMVKINPTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFIEVGIKTMRLKR 301
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ ++C + PL+ + + L+Y+ I+ G +A
Sbjct: 302 RVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLYYIGDILIYRAIRKKFGKCFRA 354
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 355 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 414
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
+D E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 415 IDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 465
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 466 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIV 523
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 524 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|449107587|ref|ZP_21744240.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451969280|ref|ZP_21922509.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
gi|448961541|gb|EMB42241.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451701884|gb|EMD56329.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
Length = 616
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 302/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 6 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 65
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 66 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHLAEIPLLESIISIDDVDFKKLEEE 125
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 126 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 181
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 182 KGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 241
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 242 GSVLLADMVKINPTLFPSVPRIWEAVYGGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKR 301
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ ++C + PL+ + + L+Y+ I+ G +A
Sbjct: 302 RVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLYYIGDLLIYRAIRKKFGKCFRA 354
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 355 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 414
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
+D E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 415 IDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 465
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 466 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIV 523
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 524 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|398348984|ref|ZP_10533687.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 214/635 (33%), Positives = 326/635 (51%), Gaps = 82/635 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
L+ AE L +GVK E + + +DN W++ D +L TG+ NV RG+ + E+ HI NH
Sbjct: 44 LNLAEALIDLGVKAREHVGVIADNRLEWIIVDAAVLFTGSANVPRGTDVTDAEMDHILNH 103
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SE+ + +E + + + ++ ++ +I++ + A ++ YD +I+ G
Sbjct: 104 SEAEVVFLETDKVYEKYSKNKSKLKGVKTVIIMDKDSKTKAKGVLH-----LYD-LIEKG 157
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
RE R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+ + +
Sbjct: 158 RELRAHGGKKTEKR----IEAIKPDDLFTLIYTSGTTGMPKGVMLMHSNMIHQMEHVVPL 213
Query: 241 VPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 296
+ + + D LS+LP WH++ER Y S GI YT V +L++DL + +P +M S
Sbjct: 214 ILKKSMIKDDDSMLSILPVWHIFERVVEYSAISLGIATFYTKVSDLRNDLAKAKPSFMAS 273
Query: 297 VPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRI-------YEG---- 342
P V+E++Y+GI +I + R+ + S Y A R YEG
Sbjct: 274 APRVWESIYTGIYNRINDPKQTPPVRKFLFNTAYLFSKNYHAAIRFLSGREVDYEGRNII 333
Query: 343 --FCL-----TRNQKQPSYLVALI---DWLWAR-------IICAILWPLHLLA------- 378
F L R + V+LI + + + +I +L + +L
Sbjct: 334 QSFILGIRAVIRLVLTGPFTVSLIAGASYFYVKTAHPNLPLIPGLLLTVAILGLIFNYKT 393
Query: 379 -EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TE++PVI+ R
Sbjct: 394 LDAIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTETAPVISVRHY 453
Query: 437 TCNVLGSVGHPINHTEIKIVD---------AETNEVLPA--GSKGIVKVRGSQVMQGYFK 485
++GSVG+ + TE++I D + EVL G KGIV ++G QVM+GY+K
Sbjct: 454 DYPIIGSVGYIVPKTELQIRDDSGKVLTHINDNKEVLAGRIGLKGIVHIKGPQVMKGYYK 513
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
NP ATK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+
Sbjct: 514 NPEATKKTI-SDGWINTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPV 562
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTI 604
+E S I+Q +V GQDQ+ GAIIVPD E + + I D +L K +
Sbjct: 563 PIENKMDESPYIKQSMVFGQDQKVLGAIIVPDFENLKPWLEENGISAHDIKDLIDHPKVL 622
Query: 605 SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 634
E+R++ S K F+ + I + +PF +
Sbjct: 623 EFYKREVREYNSTKEGFKSFELVQHIVIAPKPFEI 657
>gi|359729105|ref|ZP_09267801.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
gi|417780351|ref|ZP_12428115.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779590|gb|EKR64204.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 683
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 213/632 (33%), Positives = 309/632 (48%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIQMGLKAREHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYILQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + F + + + I+++ ++ +I +I DL E
Sbjct: 106 AKIVFIENDKMFEKYNKVKSKLPKVETIVIMDKAATAKGKNI---------HKIYDLVEE 156
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP
Sbjct: 157 G-KALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVP 212
Query: 243 A-----ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
+ D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 213 MLLTDIKTTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLSGLEVDYENRNILK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P+Y V L W + I L +
Sbjct: 333 SIAIGTKSLIVLLLTGPFTLSAMTVLAYLALPTYGVHLPSWFFLMIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 VVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E + + K I + EL K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTLWCKENGIDSSKIDELIKNPKVIEFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ I + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHIILTKKPFEV 653
>gi|449116076|ref|ZP_21752529.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
gi|448954596|gb|EMB35373.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
Length = 616
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 302/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 6 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 65
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 66 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHLAEIPLLESIISIDNVDFKKLEEE 125
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 126 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 181
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 182 KGVTMTHRNFMIQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 241
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 242 GSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKR 301
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ ++C + PL+ + + L+Y+ I+ G +A
Sbjct: 302 RVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLYYIGDLLIYRAIRKKFGKCFRA 354
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 355 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 414
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
+D E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 415 IDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 465
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 466 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIV 523
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 524 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|422342229|ref|ZP_16423169.1| AMP-binding enzyme family protein [Treponema denticola F0402]
gi|325474297|gb|EGC77485.1| AMP-binding enzyme family protein [Treponema denticola F0402]
Length = 641
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 301/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 31 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 90
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 91 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHLAEIPLLESIISIDNVDFKKLEEE 150
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 151 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 206
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 207 KGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 266
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 267 GSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKR 326
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ L C + PL+ + + L+Y+ I+ G +A
Sbjct: 327 RVTGQCPHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRA 379
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 380 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 439
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
+D E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 440 IDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 490
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 491 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIV 548
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 549 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 581
>gi|398343962|ref|ZP_10528665.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 685
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 213/635 (33%), Positives = 325/635 (51%), Gaps = 82/635 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
L+ AE L +GVK E + + +DN W++ D +L TG+ NV RG+ + E+ HI NH
Sbjct: 44 LNLAEALIDLGVKAREHIGVIADNRLEWIIVDAAVLFTGSANVPRGTDVTDAEMDHILNH 103
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SE+ + +E + + + + ++ +I++ + A ++ YD +I+ G
Sbjct: 104 SEAEVVFLETDKVYEKYTKNKSKLKGVKTVIIMDKDSKTKAKGVLH-----LYD-LIEKG 157
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
RE R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+ + +
Sbjct: 158 RELRAHGGKKAEKR----IEAIKPDDLFTLIYTSGTTGMPKGVMLMHSNMIHQMEHVVPL 213
Query: 241 VPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 296
+ + + D LS+LP WH++ER Y S GI YT V +L++DL + +P +M S
Sbjct: 214 ILKKSMIKDDDSMLSILPVWHIFERVVEYSAISLGIATFYTKVSDLRNDLAKAKPSFMAS 273
Query: 297 VPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRI-------YEG---- 342
P V+E++Y+GI +I + R+ + S Y A R YEG
Sbjct: 274 APRVWESIYTGIYNRINDPKQTPPVRKFLFNTAYLFSKNYHAAIRFLSGREVDYEGRNII 333
Query: 343 --FCL-----TRNQKQPSYLVALI---DWLWAR-------IICAILWPLHLLA------- 378
F L R + V+LI + + + +I +L + +L
Sbjct: 334 QSFVLGVQAVIRLVLTGPFTVSLIAGASYFYIKTAHPNLPLIPGLLLAVAILGLIFNYKT 393
Query: 379 -EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TE++PVI+ R
Sbjct: 394 LDAIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTETAPVISVRHF 453
Query: 437 TCNVLGSVGHPINHTEIKIVD---------AETNEVLPA--GSKGIVKVRGSQVMQGYFK 485
++GSVG+ + TE++I D + EVL G KG+V ++G QVM+GY+K
Sbjct: 454 DYPIIGSVGYVVPKTELQIRDDSGKVLTHINDNKEVLAGRIGLKGVVHIKGPQVMKGYYK 513
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
NP ATK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+
Sbjct: 514 NPEATKKTI-SDGWINTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPV 562
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTI 604
+E S I+Q +V GQDQ+ GAIIVPD E + + I D +L K +
Sbjct: 563 PIENKMDESPYIKQSMVFGQDQKVLGAIIVPDFENLKPWLEENGISARDIKDLIDHPKVL 622
Query: 605 SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 634
E+R++ S K F+ + I + +PF +
Sbjct: 623 EFYKKEVREYNSTKEGFKSFELVQHIVIASKPFEI 657
>gi|386859826|ref|YP_006272532.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934707|gb|AFI31380.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 643
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 309/576 (53%), Gaps = 37/576 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S +E+ GL G++ +K++L SD+ W++ D +++ G I+V RG+ SS +E
Sbjct: 38 SDFWKEVKSVGSGLLHYGMRKGDKVALISDSRREWIIIDIAVMSLGCIDVPRGNDSSEDE 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I NHSES + VEN + +I +++++++ K + D + I + SY
Sbjct: 98 LTYIINHSESSFIFVENAKQLQKIIAKKHDLKFVKYVVVIDDDK--LYEDKLGNITIISY 155
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++ LG K + D + E + D+AT +YTSGTTG PKGV+L H++ + Q
Sbjct: 156 RQLLSLGHNYLKDYPKMFDL----ELEKVSGKDVATIIYTSGTTGFPKGVVLRHESFIFQ 211
Query: 234 IRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 290
+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 212 LDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVGPILLKDFAALN 271
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PH +ISVP ++E + +GI K++ + S ++++ +++ Y + G L +
Sbjct: 272 PHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLKVGIFYVKLMEKFLG--LVPLYR 328
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDL 409
+ ++L++ + I +++P L LV+KKI+ A+G G+SGGG+L ++D
Sbjct: 329 KSNFLISFFVKIIYLIGLILVFPFKFLGHILVFKKIKKALGKRFIFGISGGGALVDYVDY 388
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD N VLP G K
Sbjct: 389 FFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDHNGN-VLPPGEK 447
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV---LVL 526
G + V+ QVM GYFK+ + T++ L DGW TGD+ C + + +
Sbjct: 448 GELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDL-------------VCATINDEISI 494
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 495 VGRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAI 554
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 622
I + +L + ++ K+ SKC I
Sbjct: 555 SSGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|392401755|ref|YP_006438367.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609709|gb|AFM10861.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 628
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 197/565 (34%), Positives = 308/565 (54%), Gaps = 48/565 (8%)
Query: 61 LDFAEGL-RVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
LD + L V ++P+E +++ +DN W++AD ++ GA +V RG+ ++ ++ +I N
Sbjct: 48 LDLSAALIEVCRLQPKEHVAILADNRIEWMIADYAVILAGAADVPRGTDATEHDIEYIVN 107
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFIILL----WGKKSSVAPDIVEEIPVFSYDE 175
H+ + VEN + + A L + ++ + + K +I + I E
Sbjct: 108 HAGCRIVVVENQSIWEKFASLLDKLPGVEHVVFINQFSYQKTRLECHNIHDLIAAGKAIE 167
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I++ R + I DD+ T +YTSGTTG PKGVMLTH N++ QIR
Sbjct: 168 KIEIER----------------RVAEIKPDDLFTLIYTSGTTGAPKGVMLTHGNIISQIR 211
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMI 295
+L + D LS+LP WH++ERA + G + +YT V++LK D+Q +P +M
Sbjct: 212 NLP--LGFNRHDVMLSILPIWHIFERAFEIISIASGAKTVYTNVKHLKADMQSVKPTFMA 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
S P ++E++Y+GI ++ S +R + A I ++ Y R G L Q P +
Sbjct: 270 SAPRLWESIYNGILTKVAEGSPIKRALFHAAISVNHVYRQALREMRGQNL---QILPQNI 326
Query: 356 VALIDWLWAR--IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + + +I A + P LL + +V KI++A G +A +SGGG+LP+HID F+
Sbjct: 327 FMRMAAILSSTLVIIATVVP-ALLLDAVVLSKIRAATGGRLRATISGGGALPLHIDEFFN 385
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-PA----G 467
IG+ V GYG+TE+SP+I+ R P V+GSVG + TEI++VD T + P G
Sbjct: 386 DIGIAVLEGYGMTETSPIISVRLPENAVIGSVGPLYSETEIRLVDIATGATIYPGRDYFG 445
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
KG + V+G QVM GY+KNP AT + L ++GW+NTGD+ + G L +
Sbjct: 446 RKGELHVKGPQVMAGYYKNPEATAKVL-KNGWMNTGDLAIMT----------ANGCLKIV 494
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GR+K+TIVL GENVEP+ +E L S LI Q +V+GQDQ+ A+IVP E +
Sbjct: 495 GRSKETIVLMNGENVEPVPIESKLLESPLIEQCMVVGQDQKFLAALIVPRTEALKQFGTD 554
Query: 588 LSIV--HADASELSKEKTISLLYGE 610
L + +A+ +L K +T L+ GE
Sbjct: 555 LQTLAQNAEVKKLLKAETHRLISGE 579
>gi|183219760|ref|YP_001837756.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909895|ref|YP_001961450.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774571|gb|ABZ92872.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778182|gb|ABZ96480.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 682
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 206/642 (32%), Positives = 331/642 (51%), Gaps = 75/642 (11%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ +L ++ + AE L +GVK E + + +DN W++AD +L GA NV RGS
Sbjct: 31 YQALTYKQLYEDGIALAEALIDLGVKAREHVGVLADNRVEWIIADCAVLTAGAANVPRGS 90
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ E+++I NHSE+ + +EN + + + +++ +I++ K + +
Sbjct: 91 DITDSEIVYILNHSEAKIVFLENDKVYEKFKNNKSQVKSVKTVIIM-DKDTKLKSGA--- 146
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ + ++++ GRE R + R I DD+ T +YTSGTTG PKGVML H
Sbjct: 147 -GILHFYDLLEKGRELRSKGKREAEKR----MSGIKPDDLYTLIYTSGTTGMPKGVMLMH 201
Query: 228 KNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 286
N++HQ+ + + D+ LS+LP WH++ER YF G YT V L++D+
Sbjct: 202 SNMIHQMHYVVPRVAKVTPDDRMLSILPVWHIFERVVEYFAIINGGSTYYTKVTELRNDI 261
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGF 343
Q+ +P +M S P V+E++Y+GI +I + RR + + S Y A R +G+
Sbjct: 262 QKARPTFMASAPRVWESIYNGIYTRINDPKQTPPVRRFLFKVAYFFSKHYHAAIRFLKGW 321
Query: 344 CLT---RNQKQPSYL--VALIDWLWARIICAILW-----------------PLHLLA--- 378
+ RN Q L V+++ L+ + PL++LA
Sbjct: 322 EVDYEGRNILQSLVLSIVSIVKLLFTGPFTLTILSLVASQFLVPEESPLKTPLYVLAGLG 381
Query: 379 --------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
+++V KI+ A G +A +SGGG+L H+D F+ IG+ V GYG+TE+ P
Sbjct: 382 VLFNSFTLDRIVLSKIRQATGGHLRATLSGGGALQKHVDAFFMDIGITVLEGYGMTETGP 441
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKI----------VDAETNEVL-PAGSKGIVKVRGSQ 478
VI+AR ++GSVG + ++++I +D + N + G KG+V ++G Q
Sbjct: 442 VISARTFDRPIMGSVGDIVPLSQVQIRDDAGNVLCHIDDKRNIIFGKLGVKGVVHLKGPQ 501
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
VM+GY+KNP TK+ + D W+NTGDIG I L L GRAKDTIVL
Sbjct: 502 VMKGYYKNPETTKKTI-VDNWMNTGDIGMI----------NFKKTLTLTGRAKDTIVLLG 550
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
GENVEP+ +E S I+Q +V+GQDQ+ G+IIVPD + ++ A+ I + +L
Sbjct: 551 GENVEPVPIENKIDESPYIKQSMVVGQDQKVLGSIIVPDFDALIPWAEENGITEKNPEKL 610
Query: 599 -SKEKTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
+ K I E+R + S K F Q+ + ++ +PF V
Sbjct: 611 ITHPKVIEFYKKEVRNFNSVKTGFKNFEQVQYVTLITKPFEV 652
>gi|203288031|ref|YP_002223046.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201085251|gb|ACH94825.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 643
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 310/576 (53%), Gaps = 37/576 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S +E+ GL G++ +K++L SD+ W++ D +++ G I+V RG+ SS +E
Sbjct: 38 SDFWKEVKSVGSGLLHYGMRKGDKVALISDSRREWIIIDIAVMSLGCIDVPRGNDSSEDE 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I NHSES + VEN + +I +++++++ K + D + I + SY
Sbjct: 98 LTYIINHSESSFIFVENAKQLQKIISKKHDLKFVKYVVVIDDDK--LYEDKLGNITIISY 155
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++ LG + K + D + E + D+AT +YTSGTTG PKGV+L H++ + Q
Sbjct: 156 RQLLSLGHDYLKDYPKMFDL----ELEKVSGKDVATIIYTSGTTGFPKGVVLRHESFIFQ 211
Query: 234 IRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 290
+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 212 LDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVGPILLKDFAALN 271
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PH +ISVP ++E + +GI K++ + S ++++ + + Y F + G L +
Sbjct: 272 PHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLNVGIFYVKFMEKFLG--LVPIYR 328
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDL 409
+ ++L++ + I +++P L LV+KKI+ A+G G+SGGG+L ++D
Sbjct: 329 KSNFLISFFMKIIYLIGLILIFPFKFLGHILVFKKIKKALGKRFIFGISGGGALVDYVDY 388
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD N VLP G K
Sbjct: 389 FFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDHNGN-VLPPGEK 447
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV---LVL 526
G + V+ QVM GYFK+ + T++ L DGW TGD+ C + + +
Sbjct: 448 GELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDL-------------VCATINDEISI 494
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 495 VGRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAI 554
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 622
I + +L + ++ K+ SKC I
Sbjct: 555 SSGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|339498933|ref|YP_004696968.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338833282|gb|AEJ18460.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 637
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 195/565 (34%), Positives = 300/565 (53%), Gaps = 46/565 (8%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+E+ A GL +G + + L SDN WLV D +L+ GA +V RG S+ +E+ +I
Sbjct: 43 KEVQIIAAGLLELGEQRGSHIGLISDNRQEWLVTDIAVLSIGAADVPRGCDSTDKEIAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE---------- 167
SE ENP+ ++ + L KA M + K+ V D ++E
Sbjct: 103 LGFSECTLSFAENPK---QVEKILSQKAQMPLL------KTLVVYDKIDEALKNKASSCG 153
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ + + E+ +LG++ R + R+ K + DD+AT ++TSGTTG PKGVML+H
Sbjct: 154 VQLLHFFELHELGKK-RLGKNPDEILREIDKGQ---RDDLATIIFTSGTTGEPKGVMLSH 209
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLKDD 285
N LHQ+ SL I + GD +LS+LP WH +ER Y + GI + D
Sbjct: 210 GNFLHQLPSLPLIADLKPGDVWLSVLPVWHSFERIMQYVAPCYYNGIAYSKPVGSIMLAD 269
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC- 344
+ +P +M SVP ++E++ GI + I ++++ + + A+ + + G
Sbjct: 270 FKAVRPQWMASVPRIWESVRDGIYRNIRQHGGIKKILFTFFVSVGTAHAYMRNMTLGLLP 329
Query: 345 -LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 402
R + ++ I W+ +L PL L LV+ K+++ +G KAG+SGGG+
Sbjct: 330 NFHRRMRALDTVLGCIPWM-------LLTPLKALGNVLVFNKLKALLGGRFKAGISGGGA 382
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP +D F+ A+G+ + GYGLTE++PVIA RR G VG I +TE+KIVD + N
Sbjct: 383 LPSQVDKFFSAVGITLLEGYGLTETAPVIACRRMNNARPGCVGQIILNTEVKIVDEKGNS 442
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
LP G +G++ VRG QVM+GY+K P T + L DGW NTGD+G + +
Sbjct: 443 -LPPGHQGLIMVRGGQVMKGYYKKPDLTAKVLAPDGWFNTGDLGMLTYDNE--------- 492
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
+ + GRAKDTIVL GENVEP +E S I Q +V+GQDQ+ A+IVP ++ ++
Sbjct: 493 -IKITGRAKDTIVLRGGENVEPAPIEAKINESEWISQCMVVGQDQKYLAALIVPKQDALM 551
Query: 583 MAAKRLSIVHADASELSKEKTISLL 607
A+ +I D L ++ I+ L
Sbjct: 552 AFAQENNIPIVDYETLLQQPEINEL 576
>gi|449131475|ref|ZP_21767689.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
gi|448939175|gb|EMB20093.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
Length = 616
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 302/573 (52%), Gaps = 31/573 (5%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG +P++ + L +DN WL A G++ GA +V
Sbjct: 6 DKEFKSLSYKELYETALDFAAGLLSIGARPKDHIGLIADNRKEWLHASFGIMNIGAADVP 65
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ L + II + KK
Sbjct: 66 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHLAEIPLLESIISIDNVDFKKLEEE 125
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 126 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 181
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV +TH+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 182 KGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 241
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + I + KR
Sbjct: 242 GSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKR 301
Query: 339 IYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKA 395
G C R K ++A++ ++C + PL+ + + L+Y+ I+ G +A
Sbjct: 302 RVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLYYIGDILIYRAIRKKFGKCFRA 354
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
GVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI
Sbjct: 355 GVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKI 414
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
++ E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+
Sbjct: 415 INKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI-------- 465
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 466 --KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIV 523
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + +EL + + +Y
Sbjct: 524 VHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|256829470|ref|YP_003158198.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
gi|256578646|gb|ACU89782.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
Length = 629
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 199/632 (31%), Positives = 333/632 (52%), Gaps = 59/632 (9%)
Query: 24 FRVFTRNC---VDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSL 80
F F C D +A R+ FRV E K +++L A + V+ +K+ +
Sbjct: 8 FHTFLETCDRHRDNLAFIYRVGE--DEFRVTYE-KFFEDVLILARAFKANKVRKGDKVFI 64
Query: 81 FSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAET 140
SDN W+V D + A GA++V RG+ + E+ I NHS++ L VE + + + +
Sbjct: 65 LSDNRYSWIVTDMALQALGAVSVPRGTDTPPSEIEFIVNHSDAEFLIVETDKIY-KDCQA 123
Query: 141 LCSKAAMRFIILL-------WGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDA 193
L ++ + + W +K++ +++E + EI E K +DS
Sbjct: 124 LIKSLKLKGVFICASSEKHSWFEKATSYAELLENRSI-EPKEI-----EWFKGLADS--- 174
Query: 194 RKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 253
I +D+ T +YTSGTTG PKGVML H N++H +R+L ++ ++ D ++S+L
Sbjct: 175 --------ISPEDVLTIIYTSGTTGTPKGVMLDHSNIMHNVRTLPPLIRLQSDDVWVSIL 226
Query: 254 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
P WH++ER Y + G L+Y+++R DL+ Y+P + +VP ++E+LYS I +
Sbjct: 227 PTWHIFERTAEYIGIANGSCLVYSSIRTFAADLESYKPTLVATVPRIWESLYSKITTGLK 286
Query: 314 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICA 369
+ + L+R+S AY R+ R+Q ++ S V D + A +
Sbjct: 287 KKDPKKAKIFNLLVRVSAAYRRNARVL------RDQLPVFQKKSLPVRFADKVQALVSNI 340
Query: 370 ILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
L+ +LLA+K + + G K +SGGGSLP ++D + +AIG+++ YG+TE SP
Sbjct: 341 FLFLPNLLAKKKLVLVQEKFGGRLKGAISGGGSLPPYLDEWIDAIGIRIINAYGMTECSP 400
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 489
IA R C+V G++G P+ TE++IV+ + E +P G +G ++VRG+QV +GY+KN A
Sbjct: 401 GIAGRGFNCDVFGTIGPPVGETELRIVN-DQGEPVPNGIEGEIQVRGAQVFKGYYKNDEA 459
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
A DG+L TGD+G + G LV+ GRAK+ IVL++GENV+P +E
Sbjct: 460 NAGAFTSDGFLRTGDLGRLT----------LTGELVITGRAKEIIVLASGENVDPTNIEA 509
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTISLL 607
++ V++GQD++ GA+IVPD E++ + K ++ L ++ + L
Sbjct: 510 TLSMFPFVQDAVLVGQDKKGLGALIVPDLEKLREFVLEKYNQVLEETEGALRDKQLLDRL 569
Query: 608 YGELRK-WTSKCSF----QIGPIHVVDEPFTV 634
E+ K +K F ++ IH +D+ FT+
Sbjct: 570 REEMNKLLNAKKGFKPYEKLQNIHFLDKEFTL 601
>gi|398335133|ref|ZP_10519838.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 683
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 316/632 (50%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I +HSE
Sbjct: 46 LAEALIDMGLKAREHVGVLADNRLEWMITDYAVQFSGAANVPRGTDVTESELEYILHHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + II++ K S+ + +I YD I E
Sbjct: 106 AKIVFIENDKMLEKYNKVKSKLPKVETIIVM-DKASTAKGKNIHKI----YDLI-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSL 237
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+ L
Sbjct: 156 EGKALRAKGGKKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMIHVVPMLL 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
DI P D LS+LP WH++ER Y S GI+ YT V +LK+DL + +P +M S
Sbjct: 216 TDIKPT---DSMLSILPIWHIFERVNEYGAISSGIQTYYTKVSDLKNDLAKAKPSFMASA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E++Y+GI ++ + RR + + S Y A +R G + +
Sbjct: 273 PRVWESVYTGIYNKVNDPKQTPPLRRGLFKLAYFFSKHYNASRRFLNGLEVDYENRNILK 332
Query: 352 ------PSYLVALIDWLWARIICAILWPLHLLA-------------------------EK 380
S +V L+ + AIL L L A +
Sbjct: 333 SLAIGTKSLIVLLLTGPFTVSAMAILAYLALPAYGVHLPNALFFTIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKGSMSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKP 452
Query: 440 VLGSVGHPINHTEIKIVD---------AETNEVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D + EVL G KG+V V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDDNGHVLTHINDKYEVLAGKLGQKGVVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQDQ+ GAIIVPD +++ K I + EL K K I
Sbjct: 562 NKMDESPYIKQSMVIGQDQKVLGAIIVPDVDQLAAWCKENGIDPSKVEELIKNPKVIDFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ + + +PF V
Sbjct: 622 KKEVRSYNSTKTGFKSFEQVQHVILTKKPFEV 653
>gi|203284497|ref|YP_002222237.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083940|gb|ACH93531.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 643
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 310/576 (53%), Gaps = 37/576 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S +E+ GL G++ +K++L SD+ W++ D +++ G I+V RG+ SS +E
Sbjct: 38 SDFWKEVKSVGSGLLHYGMRKGDKVALISDSRREWIIIDIAVMSLGCIDVPRGNDSSEDE 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I NHSES + VEN + +I +++++++ K + D + I + SY
Sbjct: 98 LTYIINHSESSFIFVENAKQLQKIISKKHDLKFVKYVVVIDDDK--LYEDKLGNITIISY 155
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++ LG + K + D + E + D+AT +YTSGTTG PKGV+L H++ + Q
Sbjct: 156 RQLLSLGHDYLKDYPKMFDL----ELEKVSGKDVATIIYTSGTTGFPKGVVLRHESFIFQ 211
Query: 234 IRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 290
+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 212 LDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVGPILLKDFAALN 271
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PH +ISVP ++E + +GI K++ + S ++++ +++ Y + G L +
Sbjct: 272 PHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLKVGIFYVKLMEKFLG--LVPIYR 328
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDL 409
+ ++L++ + I +++P L LV+KKI+ A+G G+SGGG+L ++D
Sbjct: 329 KSNFLISFFVKIIYLIGLILIFPFKFLGHILVFKKIKKALGKRFIFGISGGGALVDYVDY 388
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD N VLP G K
Sbjct: 389 FFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDHNGN-VLPPGEK 447
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV---LVL 526
G + V+ QVM GYFK+ + T++ L DGW TGD+ C + + +
Sbjct: 448 GELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDL-------------VCATINDEISI 494
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 495 VGRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAI 554
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 622
I + +L + ++ K+ SKC I
Sbjct: 555 SSGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|449128811|ref|ZP_21765057.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
gi|448941219|gb|EMB22123.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
Length = 641
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 302/571 (52%), Gaps = 27/571 (4%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ F+ +L + LDFA GL IG KP++ + L +DN WL A G++ GA +V
Sbjct: 31 DKEFKSLSYKELYEISLDFAAGLLSIGAKPKDHIGLIADNRKEWLHASFGIMNIGAADVP 90
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG---KKSSVA 161
RG ++ +E+ HI + SE +EN ++ + + II + KK
Sbjct: 91 RGCDATEQEITHILSFSECKFAVLENEAQIRKVLVHMAEIPLLESIISIDNVDFKKLEEE 150
Query: 162 PDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
++ E +I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNP
Sbjct: 151 FNLKERKIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNP 206
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGV ++H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+
Sbjct: 207 KGVTMSHRNFMTQLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPI 266
Query: 281 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L D+ + P SVP ++E +Y GI K + + + + KR
Sbjct: 267 GSILLADMLKINPTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFVDVGIKTMRLKR 326
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGV 397
G C Q++ L ++ L ++C + P++ + + L+Y+ I+ G KAGV
Sbjct: 327 RVTGQC-PHFQRRTKVLYPILAVL--PLLC--IAPMYYIGDLLIYRTIRKKFGKCFKAGV 381
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGGG+LP ++D F+ A+ + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 382 SGGGALPPNVDEFFWAVRINVMEGYGITETAPVISVRPMPRPVFGTLGKPLACFESKIID 441
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
NE LP KG++ V+G V +GY+K P T + +D+DGW +TGD+
Sbjct: 442 KNGNE-LPHNRKGLLLVKGDAVTKGYYKEPERTAEVIDKDGWFDTGDLAI---------- 490
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
+ G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV
Sbjct: 491 KTIDGELILKGRRKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVH 550
Query: 578 KEEVLMAAKRLSIVHADASELSKEKTISLLY 608
KE + A + + SEL + + +Y
Sbjct: 551 KENLQAWAANNGLRNVPVSELVHDSNVQKMY 581
>gi|421099382|ref|ZP_15560036.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410797584|gb|EKR99689.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 683
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 309/632 (48%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K +E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIQMGLKAKEHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYILQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + SK I++ K S+ + +I YD + E
Sbjct: 106 AKIVFIENDKMLEKYNK-VKSKLPKVETIVIMDKASTTKGKNIHKI----YDLV-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----L 237
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+ L
Sbjct: 156 EGKALRAKGSRKAEKRIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLL 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
D P D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 216 TDTKPT---DSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P+Y V L W + I L +
Sbjct: 333 SIAIGTKSLIVLLLTGPFTLSAMAILAYLALPTYGVRLPSWFFFMIAGLGLVFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 VVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+KNP
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E + K I + EL K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIKNPKVIEFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ + + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|258404180|ref|YP_003196922.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
gi|257796407|gb|ACV67344.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
Length = 630
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 306/561 (54%), Gaps = 45/561 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+KL ++ L A+ R G+ +K+ L SDN W+V D ++A GA++V RGS + S E
Sbjct: 41 AKLFEDALLLAKAFRGQGIVKGDKVFLLSDNRYAWIVTDLALMALGAVSVPRGSDTPSSE 100
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L +I +HSE L +E FN+ E + +A + +A + E + +Y
Sbjct: 101 LAYILDHSECAYLILETEGLFNQHRELIEQRALQGVFV--------IASEHPAEPGMLTY 152
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++ + ++ S + + +G DD+ T +YTSGTTG PKGV LTH N++H
Sbjct: 153 SQLL-----ANRSLSLEDLRQLMQVKRQVGGDDLVTIIYTSGTTGTPKGVKLTHANIMHN 207
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+++L D++ + D++LS+LP WH++ER Y SRG ++Y+++R DL+R++P
Sbjct: 208 VQNLPDLIRLTSEDRWLSILPTWHIFERTVEYVALSRGSCIVYSSIRTFAADLERFKPTL 267
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++E+LY + + S + + + L+ +S ++ R G L R + +P
Sbjct: 268 VATVPRIWESLYGKVNAALKKESPRKARLFQFLVSVSSSFRLNSRRISG-RLPRFEHEP- 325
Query: 354 YLVALIDWLWARII--------CAI-LWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLP 404
W R++ C + L PL+ +A + + G + +SGGGSLP
Sbjct: 326 ---------WWRVLPRKARALACVVALAPLYAVARAKLAPVKKKFGGRLRLAISGGGSLP 376
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+D + +AIG+++ YG+TE SP IA R C G++G P +TE++I + EV
Sbjct: 377 PFLDEWIDAIGIRITNAYGMTECSPGIAGRGLDCRTFGTLGPPFPYTEVRIAGQDDIEV- 435
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
P G++G ++VRG QV GY+ N A ++ DG+ TGD+G + G L
Sbjct: 436 PTGTEGEIQVRGPQVFHGYYHNNEANAESFTPDGFFRTGDLG----------KKTLNGEL 485
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM- 583
V+ GRAK+ IVL++GEN++P +E ++ V++GQD++ GA+IVPD E++
Sbjct: 486 VITGRAKEIIVLASGENIDPTNIEATISTFPFVQDAVLVGQDKKGLGALIVPDLEKLRQY 545
Query: 584 AAKRLSIVHADASELSKEKTI 604
A++ + V +A ++ ++K I
Sbjct: 546 VAEQYNHVVNEAGDVLQDKQI 566
>gi|268680079|ref|YP_003304510.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
gi|268618110|gb|ACZ12475.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
Length = 629
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 291/528 (55%), Gaps = 27/528 (5%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
KL +++L L+ + K+ DN W+V D +++ GAI + RG + ++EL
Sbjct: 40 KLFEDVLVLTRALKAKKITQHSKVMFVCDNRYEWMVTDLALVSLGAIGIPRGCDTPAQEL 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP-VFSY 173
I NHSE+ L VEN E ++R L + F++ AP+I + ++SY
Sbjct: 100 EFILNHSEASFLIVENEEMYHRYEAILPTSLEAIFVV--------EAPNIHSFLNNLYSY 151
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+I+ + R +D +A K K E + ++DI T +YTSGTTG PKGV L+H+N+++
Sbjct: 152 QDIL----KDRTIHTDELEAFKRRK-EALHTEDIVTIIYTSGTTGTPKGVPLSHQNIMYN 206
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
+R + ++ E+ D ++S+LP WH++ERA Y S G +Y+ ++ DL+ Y+P
Sbjct: 207 VREIPPLIALESADVWVSILPSWHIFERAAEYVALSGGCCTVYSTIKTFAADLEHYKPTI 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++E++Y+ I + + + + + LI IS AY +RI + L QK+ +
Sbjct: 267 VATVPRLWESMYTKINTTLEKTDPKKAKIFKKLIAISVAYKRAERILKD-ELPCFQKRSA 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEA 413
+L D A + L+P H A+K + + G + VSGGG+LP +D + +A
Sbjct: 326 FLTCK-DKSIAFVSRFALYPFHAFAQKKLSLVQEKFGGRLRLAVSGGGALPDFLDAWIDA 384
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+++ YG++E +PVIA R CN ++G P+ T +KIV E L AG G +
Sbjct: 385 IGIRIVNAYGMSECAPVIAGRALQCNTFSTLGLPVQGTMLKIVSKE-GVALEAGEIGEIW 443
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
V+G QVMQGY+KNP ++ E+G+ TGD+G + G LV+ GR+K+
Sbjct: 444 VKGEQVMQGYYKNPQENTKSFSEEGFFKTGDLGKVT----------LNGELVITGRSKEI 493
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
IVL+ GENV+P +E I+ +++G ++ GA+IVPD E++
Sbjct: 494 IVLANGENVDPSRIESTLSMLPFIQDAILVGHSKKGLGALIVPDFEKL 541
>gi|116326895|ref|YP_796615.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116329874|ref|YP_799592.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116119639|gb|ABJ77682.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116123563|gb|ABJ74834.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 683
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 309/632 (48%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIQMGLKAREHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYIIQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + F + + + SK I++ K S+ + +I YD + E
Sbjct: 106 AKIIFIENDKMFEKFNK-VKSKLPKVETIVIMDKSSTAKGKNIHKI----YDLV-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSL 237
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+ L
Sbjct: 156 EGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQMIHVVPMLL 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
D P + LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 216 TDTKPT---NSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRSILK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P+Y V L W + I L +
Sbjct: 333 SIAIGTKSLIVLLLTGPFTLSAIAILAYLALPTYGVRLPGWFFFTIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+K+P
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNILTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKDPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E + K I + EL K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIKNPKVIEFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ + + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|418720213|ref|ZP_13279411.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418735548|ref|ZP_13291958.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|421095199|ref|ZP_15555912.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361909|gb|EKP12949.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410743191|gb|EKQ91934.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410748682|gb|EKR01576.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456886947|gb|EMF98051.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 683
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 309/632 (48%), Gaps = 84/632 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + GA NV RG + EL +I HSE
Sbjct: 46 LAEALIQMGLKAREHVGVLADNRLEWMITDYAVQFCGAANVPRGVDVTESELEYIIQHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + F + + + SK I++ K S+ + +I YD + E
Sbjct: 106 AKIVFIENDKMFEKFNK-VKSKLPKVETIVIMDKSSTAKGKNIHKI----YDLV-----E 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSL 237
KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+ L
Sbjct: 156 EGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQMIHVVPMLL 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
D P + LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 216 TDTKPT---NSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--- 351
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 273 PRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRSILK 332
Query: 352 -------------------------------PSYLVALIDWLWARIICAILWPLHLLAEK 380
P+Y V L W + I L +
Sbjct: 333 SIAIGTKSLIVLLLTGPFTLSAIAILAYLALPTYGVRLPGWFFFTIAGLGLIFNAKTLDA 392
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 393 IVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKP 452
Query: 440 VLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPS 488
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+K+P
Sbjct: 453 IIGSVGFLVPKSELMIKDENGNILTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKDPE 512
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +E
Sbjct: 513 VTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIE 561
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 607
S I+Q +VIGQD++ GAIIVPD E + K I + EL K K I
Sbjct: 562 NKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIKNPKVIEFY 621
Query: 608 YGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+R + S K F Q+ + + +PF V
Sbjct: 622 KKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|374812610|ref|ZP_09716347.1| AMP-binding domain-containing protein [Treponema primitia ZAS-1]
Length = 636
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 296/559 (52%), Gaps = 36/559 (6%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
EIL A GL +G K + L + SDN W+V D +L+ GA +V RG S +E+ +I
Sbjct: 42 EILYTASGLLELGTKRGDHLGIISDNRQEWIVTDFAILSIGAADVPRGCDSMEQEITYIL 101
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE-----IPVFSY 173
+E VEN + ++I + I+ SV +E I V +
Sbjct: 102 GITECPLCFVENQKQISKILARRVDLPLLSIIV----SYDSVDQHTLEAARDAGIKVLGF 157
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
E+++LG K N + E +D+AT ++TSGTTG PKGVML+H N L Q
Sbjct: 158 GELLELG----KGRCSLNHGEIETEMEKGREEDLATIIFTSGTTGEPKGVMLSHNNFLVQ 213
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQP 291
S + + GD +LS+LP WHV+ER+ Y IF + GI L D Q +P
Sbjct: 214 QPSWRLVFEVKTGDIWLSVLPVWHVFERSIEYIIFYLNSGIAYSKPVSSILLADFQSIRP 273
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
H+M+SVP V+E++ + + + + + Y F+ + G +
Sbjct: 274 HWMVSVPRVWESIMDWSNRHVKKQGWIFKNGFEFFMTVGIMYNYFRDLTFG-------RI 326
Query: 352 PSY--LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P++ V L D+ + +L P+ L +V++ I+ +G KAG+SGGG+LP+ +D
Sbjct: 327 PNFHGRVRLFDFFMGILPLILLCPVQCLTALIVFQPIKKRLGGRFKAGLSGGGALPLKVD 386
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
LF+ AIG+++Q GYGLTE++P++AARR +VG + +TE +IVD +T +LP G
Sbjct: 387 LFFNAIGIRLQEGYGLTEAAPIVAARRYKAPRRTTVGQLLLNTEARIVD-DTGTILPPGH 445
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G ++VRG QVMQGY++ P T +AL DGWL TGDI + + + + G
Sbjct: 446 NGHLQVRGGQVMQGYYRKPELTAKALSPDGWLETGDIAMMTYDNE----------VRITG 495
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
RAKDTIVL GENVEP+ +E S + +++GQ+Q+ A++VP +E +++ A+
Sbjct: 496 RAKDTIVLLGGENVEPVPIENKIRESPWVSHCMIVGQNQKYIAALVVPVQEALMIFAEEN 555
Query: 589 SIVHADASELSKEKTISLL 607
+I D L ++ I+ L
Sbjct: 556 NIPIVDYESLLQQAEINEL 574
>gi|336324216|ref|YP_004604183.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336107797|gb|AEI15615.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 633
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 298/551 (54%), Gaps = 43/551 (7%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+KL +++L A V K+S+ SDN W+V D ++A GA++V RGS + +E
Sbjct: 41 NKLFEDVLLLANAFMDKKVTKNSKVSIISDNRYSWIVTDLALVAIGAVSVPRGSDTPGDE 100
Query: 114 LLHIYNHSESVALAVENPEFF-NRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
I NHSES + E P N +++++ K M+ I ++ G + +++
Sbjct: 101 FEFIINHSESDFIVFETPGLMKNTLSDSIAKK--MKNIFVMEGNSEHRFFN-----KIYA 153
Query: 173 YDEIIDLGRESRKAFSDSND----ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
Y+EII RE +++ + A KH DD T +YTSGTTG PKGV+L+++
Sbjct: 154 YNEIIKKDREI--TYNEIEEFISLADKH------KIDDPFTLIYTSGTTGTPKGVLLSNR 205
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 288
N L + + D+V + D +LS+LP WH++ER + +G +Y+ ++ DDL++
Sbjct: 206 NFLANLSRIPDMVDLSSDDVWLSILPSWHIFERLAEHLSVMQGCTTVYSNIKTFSDDLKK 265
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE----GFC 344
Y P + +VP ++E LY+ + + S + + L+ S AY KR+ + GF
Sbjct: 266 YSPTIVATVPRLWEALYTKVNATLKKESEKKAKIFNLLVNASAAYRRNKRLLKNNLPGF- 324
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLP 404
K+ + + A + +L P+ + A K + G + VSGGGSLP
Sbjct: 325 -----KKKGFFENIFSKGLALVKMILLKPVEMYAGKKFVLLREKFGGRLRLAVSGGGSLP 379
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+D + +AIG+++ YG+TE +P IA R C V G++G PI +TEI+IVD + N +L
Sbjct: 380 QFVDEWIDAIGIRIVTAYGMTECAPGIAGRDLHCEVFGTLGPPIKNTEIRIVDEDGN-IL 438
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
PAG +G ++V+G QV GY+KN +++ EDG+ TGD+G G L
Sbjct: 439 PAGEEGEIQVKGEQVFSGYYKNEEENEKSFTEDGFFKTGDLGKFT----------LTGEL 488
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--L 582
V+ GRAK+ IVL+ GEN++P ++E ++ V++GQD++ GA+IVPD E++
Sbjct: 489 VITGRAKEIIVLANGENIDPTKIESTISMFPFVKDAVLVGQDKKGLGALIVPDFEQMKDY 548
Query: 583 MAAKRLSIVHA 593
++ K ++H+
Sbjct: 549 VSEKYNKLIHS 559
>gi|408792933|ref|ZP_11204543.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464343|gb|EKJ88068.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 632
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 305/558 (54%), Gaps = 41/558 (7%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
+A ATR+ ++F+ + L + D A GL+ + EK+++F+DN+ W+
Sbjct: 19 NAFATRMGAGV--YQFKTY--DNLLSDAKDLAFGLKG-SLSEREKVAIFADNAYEWIQTS 73
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
+ GA++V R S + ++L+I NHSES L VEN F ++ ++ I++
Sbjct: 74 IAVTLLGAVDVPRASDVTEHDILYILNHSESKILFVENEVLFKKVIRLESELEFLKEIVI 133
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
++ K +I + + E++ G+E RK DS D + TI D+ T +Y
Sbjct: 134 IYPPKDGNKEISSRKIRISTLQELVAKGKELRKV--DSTDTV--FLNNTIKESDLFTMIY 189
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGI 272
TSGTTG PKGVMLT N+L Q+++L + + GD+ LS+LP WH++ER F G
Sbjct: 190 TSGTTGTPKGVMLTQGNILFQLQNL--PIRLQKGDRTLSILPIWHIFERIFEIFSLYYGA 247
Query: 273 ELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
Y++VR LK+DL+ +PH+M S P ++E++YSGI + SS ++ + + + +
Sbjct: 248 CTYYSSVRTLKEDLRFVKPHFMASAPRLWESIYSGILGTLAKSSPVKQKMFQLAMFFAKR 307
Query: 333 YTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 388
+ +++ G L + KQ + + L+ + +I P HL+ + LV KI+
Sbjct: 308 FFISRQVITGNVLDIHPVVFWKQS---IRFVYHLYRFFLVSI--P-HLVFDFLVLSKIRK 361
Query: 389 AIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
A G G SGGG+LP H+D F+ IG+ V GYG+TE++PV+A R + GSVG
Sbjct: 362 ATGGELRGSCSGGGALPYHVDEFFNTIGIPVLEGYGMTETAPVLAMRTFEEIIPGSVGKI 421
Query: 448 INHTEIKIVDAETNEV--------LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 499
T++++VD T EV G KG + V+G QVM GY+KNP AT + L DGW
Sbjct: 422 FPKTKLRLVDLHTGEVFLDTEVGKFVFGRKGEIHVKGKQVMAGYYKNPDATNRVL-VDGW 480
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 559
LNTGD+G +H+ L + GR+K+TIVL GENVEP+ +E L S I Q
Sbjct: 481 LNTGDLGIFTANHN----------LRIVGRSKETIVLLGGENVEPVPIESKILESEWIDQ 530
Query: 560 IVVIGQDQRRPGAIIVPD 577
+V+GQDQ+ ++ P+
Sbjct: 531 CMVVGQDQKYLSVLVYPN 548
>gi|408794088|ref|ZP_11205693.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461323|gb|EKJ85053.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 650
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 304/555 (54%), Gaps = 46/555 (8%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
+ +F L + + A GL IG+K + +++ S+N W++++ G++ GA +V
Sbjct: 32 KERQFSTISFRDLYEAGVALATGLIEIGLKLHDHVAVLSENRKEWIISNYGIILCGAADV 91
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL------LWGKK 157
RG+ + ++ +I +HS++ + VEN ++ + + + II+ L
Sbjct: 92 PRGTDVTDGDIQYILSHSDAKIVFVENEVTLRKVKKNIHKLQNITHIIVMDDDIDLLNTT 151
Query: 158 SSVAPDIV-----EEIP-VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYV 211
+ +A + + ++ P V S ++++ G+ RK D + + + I DD+ T +
Sbjct: 152 AGIADEDLLDSETKKYPKVLSINDLLIKGKNLRKL----GDRKVEERVQAIQPDDLFTII 207
Query: 212 YTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPPWHVYERACGYFIFS 269
YTSGTTG PKGVMLTH N++ Q+R+ +P E G D+FLS+LP WH +ER +
Sbjct: 208 YTSGTTGEPKGVMLTHANMISQLRN----IPIEIGPKDRFLSILPVWHSFERVFQMGTIA 263
Query: 270 RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 329
G YT VRN+++DL +P +M S P ++E++Y GIQ +I T S ++V+ +
Sbjct: 264 VGATQYYTNVRNIREDLLIVKPTFMASAPRLWESIYQGIQSKIQTGSIMKKVLFK----- 318
Query: 330 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC----AILWPLHLLAEKLVYKK 385
AY +I + + Y L + II +L+ + + +V K
Sbjct: 319 -LAYGCALQIQSSIQFLKGNRLDLYGRNLFQSITLGIISLVSITVLFVPFFILDLIVLSK 377
Query: 386 IQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 444
++ A G G VSGGGSLP HID F+ I + V GYGLTE+SP +A R V+GSV
Sbjct: 378 LRHATGGKLRGTVSGGGSLPFHIDEFFNTIRIPVFEGYGLTETSPGLAFRTAKHLVVGSV 437
Query: 445 GHPINHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
G TEI + D ET V+ G KG + VRG Q+M+GY+K P AT + L +DGWLN
Sbjct: 438 GPIFPGTEILLKDIETGVVIYPPKKGIKGEIYVRGPQIMKGYYKRPEATSKVLSDDGWLN 497
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD+G + +++ L + GR K+T+VL GEN+EP+ +E ++S+LI Q++
Sbjct: 498 TGDLGVMTFNNT----------LKIVGRTKETVVLLNGENIEPVPIENKLIQSTLIEQVM 547
Query: 562 VIGQDQRRPGAIIVP 576
++GQDQ+ GA+I+P
Sbjct: 548 IVGQDQKYLGALILP 562
>gi|398346500|ref|ZP_10531203.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 326/634 (51%), Gaps = 86/634 (13%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
L AE L G++ +E +++FSDN W++ D ++ + A++V RGS + E+ +I NH
Sbjct: 43 LSLAEALIEFGLEAKENVAIFSDNRAEWMITDCAIILSAAVSVPRGSDITDSEITYIINH 102
Query: 121 SESVALAVENPEFFNRIAETLC-SKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL 179
S+S + VEN NR+ E + K + I L +S P+ E + ++ E++
Sbjct: 103 SQSKIIFVEN----NRVLEKVIKQKKNIDHEITLILMQSD--PERKEALDMY---ELLSK 153
Query: 180 GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 239
GR+ R+ S + + R ++ SDD+ T +YTSGTTG PKGV LTH N++ Q+RS+
Sbjct: 154 GRKLREQGSRNVEER----VLSLKSDDLFTIIYTSGTTGQPKGVQLTHSNMIFQVRSVSP 209
Query: 240 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 299
I+ D+ +S+LP WH++ER Y G Y+ V++LK +L ++P + + P
Sbjct: 210 ILEITEKDRAISILPIWHIFERFLEYCFLHVGGTTYYSNVQDLKQNLTDFKPTFFGAAPR 269
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN---QKQPSYLV 356
V+E + +GI ++ R+ R L ++++ Y+ K + F L + + S+
Sbjct: 270 VWEMICNGILARMTDPDRTSRL-GRILFKLAYTYSEKKNEAKAFFLGNELDLKGRSSFAT 328
Query: 357 AL------IDWLW--------ARIICAILWPLHLLAE----------------------K 380
L ++L+ +CA L P AE +
Sbjct: 329 FLKGLRMAFEYLFFGPFTLSAISFLCAALIPFGYAAEEIKILLYTIGVIGLLFNSFMLDQ 388
Query: 381 LVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
LV KI+ I G K VSGGG+LP +D +G+++ GYG+TE+SPVI+ RR
Sbjct: 389 LVLSKIRKDIVGGFLKTSVSGGGALPNRVDRTLNHLGIRLLEGYGMTETSPVISIRRTDK 448
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVL------------PAGSKGIVKVRGSQVMQGYFKN 486
V+GSVGH + T ++I E NEVL G KG+V G +M+GY+KN
Sbjct: 449 FVIGSVGHILPKTRLQI-RTEKNEVLSEIDENGKFTKGKPGQKGVVFASGPHIMKGYYKN 507
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
P T AL+ GW+NTGDIG ++ + + L L GRAK+TIVL GENVEP+
Sbjct: 508 PDITADALNA-GWMNTGDIGIVSYNRT----------LTLAGRAKETIVLRGGENVEPVP 556
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTIS 605
+E S I Q +VIGQDQ+ GAIIVPD E ++ AK I V + L + + I
Sbjct: 557 IEAKLQVSKYISQCMVIGQDQKNLGAIIVPDFESLIGWAKENYIPVDSIQELLQRRQVID 616
Query: 606 LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
L E++ + K Q+ P ++ +PF V
Sbjct: 617 LYRSEIKALNNARSGFKSFEQVTPFLLIVKPFEV 650
>gi|381180251|ref|ZP_09889093.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380767812|gb|EIC01809.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 636
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 308/570 (54%), Gaps = 40/570 (7%)
Query: 25 RVFTRNCVDAVATRIRISR-RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
R+F + + ++SR ++ F + + + FA GL GV EE + L SD
Sbjct: 7 RLFRKRASEHPELAFQMSRCKDGHFEPTTYKEAYENAVAFAGGLLAHGVAREEHIGLVSD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W AD G+L GAI+V RG ++S +L +I + SE + VEN ++ + +
Sbjct: 67 NRKEWEQADMGLLMLGAIDVPRGCDATSGDLEYILSFSECRRVIVENSA---QVEKIIAL 123
Query: 144 KAAMRFIILLWGKKSSVAPDIVEE----IPVFSYDEIIDLGRESRKAFSDSNDARKHYKY 199
K + + L + DI + +FS+++I+ GRE F+ +N + +
Sbjct: 124 KEKLPLVTELIMFDNPGDKDIESAKNAGLSLFSFEQILSEGRE----FNAANPGKVEDEM 179
Query: 200 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 259
+ DD+AT ++TSGTTG PKGVML+H N + Q+ + + + GD+ + +LP WH +
Sbjct: 180 DKGKWDDLATIIFTSGTTGKPKGVMLSHGNFITQLDEVCERIYLYPGDRGMMVLPVWHAF 239
Query: 260 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIF-TSS 316
+RA Y + ++ + Y+ L DL+ P + +VP V+E +Y GI + + T
Sbjct: 240 QRAVEYVVLNQSATICYSKPVGPVLLADLKALNPQVLPAVPRVFEAVYDGIYRNMRKTGG 299
Query: 317 AARRV----VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 372
R+ VA AL F R R + P+++ I WL +C +
Sbjct: 300 IVLRLFNFFVAIALFHSKLDRVLFDRTTRYGMDKRWLQWPAFV---IPWL----VC---Y 349
Query: 373 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 431
P+ LL ++++KI+ +G + ++GV+GGG+LP +D F+ AIG+K+ GYGLTE++P+I
Sbjct: 350 PIKLLGGAMIFRKIRKMLGTNFRSGVAGGGALPPAVDKFFWAIGIKLVEGYGLTETAPII 409
Query: 432 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 491
+ R VLG+VG + ++VD T + L G KG+++V+G VM+GY+K P T
Sbjct: 410 SVRPIDRPVLGNVGSAVRGISARVVDPLTRKPLKRGKKGVLEVKGGTVMKGYYKQPELTA 469
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+A+DE+GW +TGD+ + ++ +VL GR KDTIV + GENVEPL +E
Sbjct: 470 KAIDENGWFDTGDLARLTANNE----------IVLCGRVKDTIVQTGGENVEPLPIEMKM 519
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
S I+ VV+GQDQR A++VP++ EV
Sbjct: 520 QESRFIKTAVVLGQDQRYLAALVVPEQSEV 549
>gi|187918454|ref|YP_001884017.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119861302|gb|AAX17097.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 643
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 310/573 (54%), Gaps = 39/573 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S E+ GL G+K ++++L SD+ W++ D +++ G I+V RG+ SS +E
Sbjct: 38 SDFWNEVKRAGSGLLHYGIKKGDRVALISDSRREWIIIDIAVMSLGCIDVPRGNDSSDDE 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFII-LLWGKKSSVAPDIVEEIPVFS 172
L +I NHSES + VEN + +I + K ++F+ ++ + D + I + S
Sbjct: 98 LAYIINHSESSFVFVENAKQLQKI---IAKKHELKFVKHVVVIDDDKLYEDKLGNITIIS 154
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
Y +++ +G + K N + E + DIAT +YTSGTTG PKGV+L H++ +
Sbjct: 155 YKKLLSVGYDYLK----DNPKMFDSELEKVSGKDIATIIYTSGTTGLPKGVVLRHESFIF 210
Query: 233 QIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRY 289
Q+ + + +P E G +S+LP WH +ER+C Y + GI + Y+ L D
Sbjct: 211 QLDRISNYLPTLEPGKIMISILPLWHSFERSCEYIVTLNGIAVAYSKPIGPILLKDFATL 270
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
PH +ISVP ++E + GI K++ + S +R++ +++ Y K + GF
Sbjct: 271 NPHAIISVPRIWEGIRIGIIKRV-SESFLKRILFNVFLKVGIIYVKLKEKFLGFVPV--Y 327
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
K+ +++V+ + ++ P L LV++KI+ A+G + G+SGGG+L ++D
Sbjct: 328 KKSNFVVSFFMKVIYLAGLILILPFKFLGYVLVFRKIKKALGKRFEFGISGGGALVDYVD 387
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAAR---RPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
F++A+G+ V GYGLTE+ PV++ R RP N +VG + E ++VD++ N LP
Sbjct: 388 YFFKAVGIVVLEGYGLTETGPVLSVRCLRRPVAN---TVGPLLPDVEYRVVDSDGN-ALP 443
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G KG + VR QVM GYFK+ + T++ L DGW TGD+ ++ +
Sbjct: 444 PGEKGELWVRSPQVMSGYFKDEATTREVLTRDGWFKTGDLVCATMNNE----------IS 493
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ GR KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 494 IVGRTKDTIVLRGGENIEPEPIERALSKSVFIESVVVVGQDQKFLGAIIVPNFEVLEKWA 553
Query: 586 KRLSIVHADASELSKEKTISLLYGELRKWTSKC 618
++ + +L ++++ LY SKC
Sbjct: 554 GSNGVLFSSRDDLLSNESVNKLY-------SKC 579
>gi|359688978|ref|ZP_09258979.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418756346|ref|ZP_13312534.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384116017|gb|EIE02274.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
Length = 685
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 317/635 (49%), Gaps = 82/635 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
L +E L +GVK E + + +DN W++ D G+L +G NV RG+ + E+ +I H
Sbjct: 44 LSLSEALIDLGVKAREHIGVLADNRLEWIIVDAGVLLSGCANVPRGTDVTDSEMEYILTH 103
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SE+ + +EN + + + + + +I++ + A ++ YD +I G
Sbjct: 104 SEASVVFLENDKMYEKFIKNKAKLKGVETVIIMDKDSKTKAKGVLH-----LYD-LIATG 157
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
+E R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+ + +
Sbjct: 158 KELRAKGGHKTEKR----IEGIKPDDLFTLIYTSGTTGMPKGVMLMHSNMVHQMEYVVPL 213
Query: 241 VPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 296
+ + + D LS+LP WH++ER Y S GI YT V +L++DL + +P +M S
Sbjct: 214 ILKKSLLRDDDSMLSILPVWHIFERVVEYSAISLGISTFYTKVADLRNDLAKARPSFMAS 273
Query: 297 VPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-- 351
P V+E++Y+GI +I + R+ + S Y A R G + +
Sbjct: 274 APRVWESIYTGIYNKINDPKQTPPVRKFLFNTAYLFSKNYNAGIRFLTGKEVDYENRSIF 333
Query: 352 ----------------PSYLVALIDWLWARII------CAILWPLHLLA----------- 378
+ V+LI + I A L P+ L
Sbjct: 334 KSLALGIKAIGQVVLFGPFTVSLISAVGYSYIKMYKPELAFLAPVLLTIAILGLIFNFKT 393
Query: 379 -EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TES+PVI+ R
Sbjct: 394 LDTIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTESAPVISVRHY 453
Query: 437 TCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFK 485
++GSVG+ + TE+++ D N ++L G KGIV ++G QVM+GY+K
Sbjct: 454 DHPIIGSVGYIVPKTELQLRDDHGNVLTHINDQRQLLAGKLGVKGIVHIKGPQVMKGYYK 513
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
NP TK+ + DGWLNTGDIG+I H+ L L GRAK+T+VL GENVEP+
Sbjct: 514 NPEVTKKTI-VDGWLNTGDIGFINFKHT----------LTLTGRAKETVVLLGGENVEPV 562
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTI 604
+E S I+Q +V GQDQ+ GAIIVPD E + + I D +L K I
Sbjct: 563 PIENRMDESPYIKQSMVFGQDQKVLGAIIVPDLEVLQPWLAQNGIQAKDIKDLIDNPKVI 622
Query: 605 SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 634
E+R++ S K F+ I + + +PF +
Sbjct: 623 EFFKKEIREYNSTKHGFKSFELIQHVVIAQKPFEI 657
>gi|418748591|ref|ZP_13304883.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|404275660|gb|EJZ42974.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 678
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 317/635 (49%), Gaps = 82/635 (12%)
Query: 61 LDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNH 120
L +E L +GVK E + + +DN W++ D G+L +G NV RG+ + E+ +I H
Sbjct: 37 LSLSEALIDLGVKAREHIGVLADNRLEWIIVDAGVLLSGCANVPRGTDVTDSEMEYILTH 96
Query: 121 SESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
SE+ + +EN + + + + + +I++ + A ++ YD +I G
Sbjct: 97 SEASVVFLENDKMYEKFIKNKAKLKGVETVIIMDKDSKTKAKGVLH-----LYD-LIATG 150
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
+E R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+ + +
Sbjct: 151 KELRAKGGHKTEKR----IEGIKPDDLFTLIYTSGTTGMPKGVMLMHSNMVHQMEYVVPL 206
Query: 241 VPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 296
+ + + D LS+LP WH++ER Y S GI YT V +L++DL + +P +M S
Sbjct: 207 ILKKSLLRDDDSMLSILPVWHIFERVVEYSAISLGISTFYTKVADLRNDLAKARPSFMAS 266
Query: 297 VPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-- 351
P V+E++Y+GI +I + R+ + S Y A R G + +
Sbjct: 267 APRVWESIYTGIYNKINDPKQTPPVRKFLFNTAYLFSKNYNAGIRFLTGKEVDYENRSIF 326
Query: 352 ----------------PSYLVALIDWLWARII------CAILWPLHLLA----------- 378
+ V+LI + I A L P+ L
Sbjct: 327 KSLALGIKAIGQVVLFGPFTVSLISAVGYSYIKMYKPELAFLAPVLLTIAILGLIFNFKT 386
Query: 379 -EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TES+PVI+ R
Sbjct: 387 LDTIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTESAPVISVRHY 446
Query: 437 TCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFK 485
++GSVG+ + TE+++ D N ++L G KGIV ++G QVM+GY+K
Sbjct: 447 DHPIIGSVGYIVPKTELQLRDDHGNVLTHINDQRQLLAGKLGVKGIVHIKGPQVMKGYYK 506
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
NP TK+ + DGWLNTGDIG+I H+ L L GRAK+T+VL GENVEP+
Sbjct: 507 NPEVTKKTI-VDGWLNTGDIGFINFKHT----------LTLTGRAKETVVLLGGENVEPV 555
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTI 604
+E S I+Q +V GQDQ+ GAIIVPD E + + I D +L K I
Sbjct: 556 PIENRMDESPYIKQSMVFGQDQKVLGAIIVPDLEVLQPWLAQNGIQAKDIKDLIDNPKVI 615
Query: 605 SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 634
E+R++ S K F+ I + + +PF +
Sbjct: 616 EFFKKEIREYNSTKHGFKSFELIQHVVIAQKPFEI 650
>gi|51245185|ref|YP_065069.1| long-chain-fatty-acid--CoA ligase [Desulfotalea psychrophila LSv54]
gi|50876222|emb|CAG36062.1| related to long-chain-fatty-acid--CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 649
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 309/570 (54%), Gaps = 45/570 (7%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
SKL +++L + + G+ +K+ L SDN W+V D +L+ GA+NV RGS + ++E
Sbjct: 57 SKLFEDVLLLSRAFKRRGLGRGDKVMLLSDNRYSWIVTDLALLSLGAVNVPRGSDTPTQE 116
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETL--CSKAAMRFIIL------LWGKKSSVAPDIV 165
L I HSESV L VE+ + + A+ + C + FI++ L+G+
Sbjct: 117 LEFIVEHSESVHLIVESSKLLDLHADYIKRCRQIKDIFIMVAGEVHTLFGR--------- 167
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
+SY +++ + S K D N+ + T DD T +YTSGTTG PKGV L
Sbjct: 168 ----TYSYQDLLANRQYSEK---DVNNFLEEGYSST--EDDFVTIIYTSGTTGVPKGVQL 218
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
++KN++H + L I+ D +LS+LP WH++ER Y + G L+Y+ VR L D
Sbjct: 219 SNKNIMHNVDCLPGIIRLTEEDLWLSILPSWHIFERTAEYVALAAGTTLVYSTVRTLVQD 278
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L+RY+P + +VP V+E+LYS + + A + +LI S Y +R + L
Sbjct: 279 LERYKPTLLATVPRVWESLYSKVDSGVRKKGAMAYRIFTSLIWCSSTYRRNRREF----L 334
Query: 346 TRNQ--KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL 403
R +P+ LV A + L+ +L AEK + Q G + +SGGGSL
Sbjct: 335 DRLPVFAKPNSLVRFGQKGVALVKMLFLYLPYLFAEKKLNVVRQRFGGRLRLAISGGGSL 394
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+++ + +A+G+++ YG+TE SP IA R C V G+VG + +T I++VD + EV
Sbjct: 395 ADYLEEWVDAVGIRIVNAYGMTECSPAIAGRGLDCRVYGTVGAGVTNTRIRLVDDDGLEV 454
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
G +G+++V G QVM GY+KN ++ +DG+ TGD+G R G
Sbjct: 455 -SQGKEGLIEVVGDQVMGGYYKNDVGNIESFTDDGFFRTGDLG----------RRTISGD 503
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL- 582
LVL GRAKD IVLS+GEN++P +E A ++ +++GQD++ GA++V D+EE+L
Sbjct: 504 LVLTGRAKDIIVLSSGENIDPSRIESAISVFPFVQDAILVGQDKKGLGALLVADREELLK 563
Query: 583 MAAKRLSIVHADASELSKE-KTISLLYGEL 611
A R S + + EL K+ K + L+ E+
Sbjct: 564 YADSRFSHLRKASQELLKDNKVLELIRKEM 593
>gi|333993405|ref|YP_004526018.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
gi|333737141|gb|AEF83090.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
Length = 644
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 295/550 (53%), Gaps = 33/550 (6%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL +G K + + L SDN WL AD G+ A GA +V RGS + ++EL +I + +
Sbjct: 55 AAGLLELGAKRGDLVGLISDNRQEWLAADFGIQAIGAADVPRGSDTLNQELSYILSFTGC 114
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIID 178
EN + ++ ++ I+ +V +I E I ++SY E+++
Sbjct: 115 GISFAENQKLAVKLLSCKADLPELKIIVTF----ETVGAEIKAEAESLGITIYSYRELLN 170
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
LG+ R+ + DA + DD T ++TSGTTG PKGVMLTHK L Q+ +
Sbjct: 171 LGKNRREIYPGEVDA----EIAKGKGDDTVTVIFTSGTTGEPKGVMLTHKTFLCQVPRFH 226
Query: 239 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMIS 296
+ + G+ +LS+LP WHV+ERA Y + Y+ + L D +PH+M++
Sbjct: 227 LVFDTKPGEIWLSVLPVWHVFERAIEYVALYHKNAIAYSKPISSVLMADFANIKPHWMVA 286
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP V+E + GI + + + + Y F+ + G + + V
Sbjct: 287 VPRVWEAVMDGIYRSVKLMGKFQEFFFNFFVSFGLMYAYFRDLAFGLIPNFHGR-----V 341
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 415
+D + +L P+ LA +V+++++ +G +AG+SGGG+LP +D F+ A+G
Sbjct: 342 RAVDAVLGFFPWLLLAPVRGLAYLIVFRRLKLRLGGRFRAGISGGGALPARVDHFFNAVG 401
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGH-PINHTEIKIVDAETNEVLPAGSKGIVKV 474
+++Q GYGLTE+SP+++ R+ + G++G ++ TE +I+D + E LP GS GI+ V
Sbjct: 402 LRLQEGYGLTETSPIVSVRQYRKSRRGTIGQILVDDTEFRILDDKGRE-LPPGSSGILYV 460
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG QVM+GY+K P T + L DGWLNTGDI H+R G L L GRAKDTI
Sbjct: 461 RGPQVMKGYYKKPELTAEVLSADGWLNTGDIA----MHTR------DGELRLTGRAKDTI 510
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
VL GENVEP+ +E S I Q VV+GQDQ+ A+IVP ++ V+ A+ +I D
Sbjct: 511 VLRGGENVEPVPIENKLKESPRIGQCVVLGQDQKYLAALIVPVQDAVMAFAEENNIPIVD 570
Query: 595 ASELSKEKTI 604
L ++ I
Sbjct: 571 YELLLQQPEI 580
>gi|254443628|ref|ZP_05057104.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
gi|198257936|gb|EDY82244.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
Length = 638
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 209/624 (33%), Positives = 318/624 (50%), Gaps = 64/624 (10%)
Query: 34 AVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQ 93
A ATRI+ + F+ L L L +GV+ + +++ SDN W +AD
Sbjct: 27 AFATRIK----SGVFKPVSYRDLYDFGLFLGTALIELGVEARDHVAILSDNRVEWNIADY 82
Query: 94 GMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL 153
+L GA +V RG+ +++E+ +I HS+S + VE+ R+ + + ++L+
Sbjct: 83 AVLMCGAADVPRGADVTNQEIEYILAHSDSKVVFVESARLLERVIRVMPKLDKVEHLVLM 142
Query: 154 WGKKSSVAPDIVEEIP--VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYV 211
D E P V E++D G+E R + D R + I DD+ T +
Sbjct: 143 ---------DPKAEPPKGVRGLYELVDWGKELR----EQGDRRVEERMAQIRPDDLFTLI 189
Query: 212 YTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG 271
YTSGTTG PKGV LTH N+ Q+R+L + E D+ LS+LP WH YER S G
Sbjct: 190 YTSGTTGTPKGVQLTHSNMASQVRNLPFCL--EQDDRMLSILPVWHSYERVFHMIAVSNG 247
Query: 272 IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+T++R + DDL+ +P M S P ++E LY I K + S RR + RA
Sbjct: 248 CCTYFTSLRTIADDLKTVKPTIMASAPRLWENLYLRIMKNVKESHWIRRGLFRA------ 301
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL-----WPLHLLAEKLVYKKI 386
AY + R+ +G +K+ I +++ + PL++ +V +K+
Sbjct: 302 AYFS-SRMVKGSTFFFQRKEMDLTGRSIGETLGKVLSGVFKIMLFLPLYVALNAVVLEKL 360
Query: 387 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
+ +G S K VSGGG+L H+D F+ IGV V+ GYGLTE+SPV A R V+G+VG
Sbjct: 361 RQIVGGSFKGTVSGGGALQPHVDEFFNYIGVPVKEGYGLTETSPVAAVRTVPKLVIGTVG 420
Query: 446 HPINHTEIKIVDAETNEVL---------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 496
TE++I+D T E+L G KG + ++G QVM+GY+KNP AT + L E
Sbjct: 421 PLYPETELRILDLNTGEILYPNTKYRANGRGQKGEIHLKGPQVMKGYYKNPEATDRVLKE 480
Query: 497 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 556
GW NTGDIG L + GR+KDTIVL GEN+EP+ +E S L
Sbjct: 481 -GWFNTGDIGMYT----------FNDCLKIMGRSKDTIVLLNGENLEPIPIEAKLCESPL 529
Query: 557 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK-TISLLYGELRKWT 615
I Q +V+GQD++ GA++VP E A + + +EL+ K + L++ E +++
Sbjct: 530 IDQCMVVGQDKKHLGALVVPSLEGFAAAGIKAETL----TELAGSKEAVRLIHEEAKRFI 585
Query: 616 S-----KCSFQIGPIHVVDEPFTV 634
S K + + ++D+PF V
Sbjct: 586 SFDNGFKKYEHVHSLKLLDKPFEV 609
>gi|392403578|ref|YP_006440190.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611532|gb|AFM12684.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 297/559 (53%), Gaps = 42/559 (7%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
GL IG+K +K+ +D WL G+ + G ++V RG+ +++ EL +I+ H++
Sbjct: 52 GLDSIGLKRGDKVGFIADVGQTWLPVSIGINSIGGVDVPRGTDATAAELTYIFKHADCPV 111
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
+ ++N + + IA +L + ++ II + G K P + I V+S +EII+ G +
Sbjct: 112 IILDNEKVYQSIASSLSAFEHLKTIIFVNGAK----PQVPSNITVYSLNEIIEKGNAAHA 167
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 245
A N +R + DD+ T +YTSGTTGNPKGVM T K+L +I + D +P +
Sbjct: 168 A----NPSRFADLGGRVAEDDLVTIIYTSGTTGNPKGVMHTQKSLAWEIWHVADGLPLIS 223
Query: 246 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY 305
G + LPPWHV ER ++G+ + +T+V L DLQ +P +++SVP V+E+ Y
Sbjct: 224 GGVTMGFLPPWHVAERLIESVALTKGVAIAFTSVATLAKDLQEARPTFLLSVPRVWESFY 283
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ---KQPSYLVALIDWL 362
+ + + +S VA+ + + ++A E L+ + ++PS L L
Sbjct: 284 NKVIDGVKKASP----VAQKIFHFA-RWSAMHFSLEKDILSNTKYRLEKPSILFHLFRRP 338
Query: 363 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGY 422
A + +L+ +LLA+ ++ K + G + +SG G+LP HID F+ +IG+ + Y
Sbjct: 339 AALVNLVLLFIPNLLAQVILAKVRRGLGGRVQFALSGAGALPEHIDRFFYSIGIAIVETY 398
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE+ V R V+G+VG PI T +K++D NEV +KG+ G +M+G
Sbjct: 399 GMTETGGVTCRRTYPATVIGTVGKPIKGTRVKLLDDHGNEVTKPNTKGVCWHTGPHIMKG 458
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K T + L +DGWLN+GDI G L GRAKDTIVL GENV
Sbjct: 459 YYKEDQKTSEVL-KDGWLNSGDI----------LVYTANGELKFAGRAKDTIVLFGGENV 507
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
EP +E+ ++S I QIVV+GQD++ GA+IVP KE VL +A+ ++L
Sbjct: 508 EPQPIEDTLIQSEYIHQIVVVGQDKKTLGALIVPAKEAVLK--------YAEENKLQ--- 556
Query: 603 TISLLYGELRKWTSKCSFQ 621
L E+R W Q
Sbjct: 557 ----LPAEMRDWPVNADIQ 571
>gi|392405230|ref|YP_006441842.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613184|gb|AFM14336.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 292/530 (55%), Gaps = 46/530 (8%)
Query: 72 VKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENP 131
VKP +++++F DNS WLV D + GAI V RGS S+ +EL I NH E+ VE+
Sbjct: 60 VKPGDRVAIFGDNSAEWLVTDMAIQMAGAIVVPRGSDSTPQELEFILNHCEAEICFVEHL 119
Query: 132 EFFNRIAETLCSKAAMRFII-LLWGKKSS------VAPDIVEEIPVFSYDEIIDLGRESR 184
F +I L + +I+ L+ +K++ V P ++ ++P+ + +E+ +L +
Sbjct: 120 RLFKKIGGVLKKRGTKVYIMDPLFPEKTAADEKLNVLPRLLHDLPLATDEELKELEALRQ 179
Query: 185 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
K I D+ T +YTSGTTG PKGVML+H N+L+Q+ I+
Sbjct: 180 K----------------ILQGDLFTIIYTSGTTGEPKGVMLSHANMLYQLEIAPKILQMS 223
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
D+ LS+LP WH+YER Y + G Y+ ++L +D R +P M S P ++E +
Sbjct: 224 PRDRILSILPVWHIYERFMLYSVIFSGAHYYYSNKKDLMEDFIRAKPTIMASAPRLWEQI 283
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK----QPSYLVALID 360
Y ++++I + A R + +Y +R++ + Q + ++L L +
Sbjct: 284 YQKLRERIDKTEAFNREL------FDLSYGIKQRLHRAQNVVAGQSAETGEKNFLSNLFE 337
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQ 419
+ A L + + + ++++ +G G +SGGG+LP+HID F+ AIG+ V
Sbjct: 338 KAVSVFSLAGLKGPDVYMDSIFLVRVRAMLGGELRGTISGGGALPLHIDEFFNAIGIPVY 397
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE+SP+I+ R+P ++G+VG + T ++I E ++P G G++ V+G V
Sbjct: 398 EGYGMTETSPLISMRQPGKVIMGTVGFVPDRTTVEI-RGEDGRIMPPGEPGVIFVKGPGV 456
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
MQGY+KN AT + L ++GW+NTGDIG RS G L + GRAKDTIVL +G
Sbjct: 457 MQGYYKNGDATLKVL-QNGWMNTGDIGVFT------RS----GALSIRGRAKDTIVLRSG 505
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
EN+EP+ +E + LI Q VV+GQDQ+ G +I PD + +L A ++S
Sbjct: 506 ENLEPVPMETLLAQHPLIEQAVVVGQDQKNLGVLIWPDYDRLLDAGYQVS 555
>gi|224004188|ref|XP_002295745.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
gi|209585777|gb|ACI64462.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
Length = 658
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 292/533 (54%), Gaps = 59/533 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +G+K + +++F +NS WL D G+ G VVRG+ S +EL +IY++S++
Sbjct: 50 AAAFTALGIKEGDHVAVFGENSAHWLFVDHGIQRCGGATVVRGAESPIDELRYIYDNSDA 109
Query: 124 VALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ V + P ++AE K + I L K V V + F+ +
Sbjct: 110 HQVVVLQGPSLLKKLAEA-ARKDGSQGIGL---KNKHVRSSEVHAL-CFANQQFF----- 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR------S 236
R F ++ + DD+AT VYTSGTTG PKGVMLTH NLLHQI+
Sbjct: 160 LRNVF---------FQLPKLKKDDLATIVYTSGTTGRPKGVMLTHGNLLHQIQLRFAPTK 210
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 296
YD+ G+ +S+LP WH+ ERA IFSRG L+Y+ V++LK+DL ++PH+M+
Sbjct: 211 KYDVSEPLPGEVMVSILPVWHITERAAELCIFSRGCTLVYSNVKHLKNDLALHKPHWMML 270
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIR----ISFAYTAFKRIYEGFCLTRNQKQP 352
VP V E + G++ + + + ++ARA+I ++ + ++ G + K+P
Sbjct: 271 VPRVLEKVALGVKDKF----SKKNMIARAMIHFFTLVASTKSKLLKVARGQVIA--AKKP 324
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFY 411
+ L +++R + +L PL + LV+ K+++A+ G K VSGG +L ++ FY
Sbjct: 325 N----LFRRVFSRCLATLLTPLDAIGHALVWNKVKAALGGRQKLIVSGGSALNGSLEEFY 380
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETN------EV 463
E GV + VGYGLTE SP+I RR N++ G VG P+ TEI++VD
Sbjct: 381 ETCGVLLIVGYGLTECSPLICHRRSDSNLVAGGCVGLPVTSTEIRVVDVNAKAGDAERTS 440
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
+ G G+V +G QVM+GY+ N AT +++D+ GWL+TGD+G+I P +
Sbjct: 441 IEKGQIGLVLAKGPQVMKGYYNNQKATNKSIDKYGWLDTGDLGYINPATND--------- 491
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI-VVIGQDQRRPGAIIV 575
L + GRAKDTIVLS GENVEP LE+ L ++I Q+ + QD+++ AI V
Sbjct: 492 LFITGRAKDTIVLSNGENVEPSPLEDVLLGCNMIDQVTITTSQDEKQLHAIAV 544
>gi|307719093|ref|YP_003874625.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
gi|306532818|gb|ADN02352.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
Length = 630
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 194/568 (34%), Positives = 300/568 (52%), Gaps = 41/568 (7%)
Query: 22 HGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLF 81
H +V +++A +R + F +L +++L A G +G+ + ++L
Sbjct: 7 HLLKVQAETHPESIAQYVR--QPEGGFTPITYRQLLEDVLTCAAGFAALGIGKGDLVALI 64
Query: 82 SDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETL 141
S+N WL+ D G+L GA +V RG + +EL HI +E EN ++ + L
Sbjct: 65 SENRREWLLVDMGLLFLGAADVPRGCDVTEKELEHILLTAECSIGVFEN---LVQLKKAL 121
Query: 142 CSKAAMRFIILLWGKKSSVAPDIV-------EEIPVFSYDEIIDLGRESRKAFSDSNDAR 194
S+ + K++V D+ E + V S+ ++++ G ++ D A
Sbjct: 122 ASERIRHRL------KTAVLFDMPPRIEGEREGLTVLSFHQLMERGAQALPGMRDHILAA 175
Query: 195 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 254
E + + +AT ++TSGTTG PKGVML+H N LHQ++ + ++ GD +LS+LP
Sbjct: 176 A----EELPASTLATVIFTSGTTGLPKGVMLSHGNFLHQVKGVPILLKVGPGDIWLSVLP 231
Query: 255 PWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 312
WH +ER Y S + Y+ R + D+ +P +M SVP ++E + GI + I
Sbjct: 232 VWHSFERMMQYVALSSASAIAYSKPIGRIMLQDMATLKPTWMASVPRIWEGIRKGILQTI 291
Query: 313 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 372
+ + +A + + AY F + +G L R + +P ++D + I +LW
Sbjct: 292 KKEPPLVQAIFQASLVVGRAYAFFAHMVKG-ELPRFRWRPR----ILDRMAGLIPFLLLW 346
Query: 373 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 431
P LA LV++K+ +G AG+SGGG+LP +D F++AIG+ V GYGLTE++PV+
Sbjct: 347 PFKQLAHLLVFRKLHRKLGGRFVAGISGGGALPPEVDGFFDAIGITVLEGYGLTEAAPVL 406
Query: 432 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 491
A R V +VG TEI+I D E N VLP G +G V RG QVM GY K P T+
Sbjct: 407 AVRSYYHPVPHTVGPVFPDTEIQIRDEEGN-VLPPGRQGTVFARGGQVMLGYLKAPEETR 465
Query: 492 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 551
+ LDE+GWLNTGD+G + + L + GRAKDTIVL GENVEP LE+A
Sbjct: 466 KVLDEEGWLNTGDLGMLTWDNE----------LAITGRAKDTIVLRGGENVEPAPLEQAL 515
Query: 552 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L+ +V+GQD++ GA+I D+E
Sbjct: 516 KEHPLVAHAMVVGQDEKYLGALIFVDQE 543
>gi|384107950|ref|ZP_10008847.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383870334|gb|EID85937.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 652
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 292/565 (51%), Gaps = 26/565 (4%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
+N ++ + ++ ++ FA LR IGVK + ++L SDN W + D +L GA +V
Sbjct: 34 KNGVYQYYTYAQFYDSVIAFAHALRSIGVKRGDNIALMSDNRREWFIMDYAILCLGAADV 93
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
RG S E+ I + ++ V EN + +I E + ++ +IL + S
Sbjct: 94 PRGCDSMGTEMRFITSFADCVTGVFENEKQLGKILEKIEEVPLLKTVIL-FDHMSQEGES 152
Query: 164 IVEE--IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
E + VF +++++ G E D+ A + E DD+AT ++TSGTTG PK
Sbjct: 153 RASEAGLTVFYFEDLMKKGLEIVGESPDAKKAEIEAEMEATSPDDVATMIFTSGTTGTPK 212
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AV 279
GVMLTH N + Q+ ++D + + GD ++++LP WHV+ER Y L Y+ A
Sbjct: 213 GVMLTHNNYISQLSVIHDFITCKQGDWWMTILPVWHVFERLIQYVAVHMKCGLAYSKPAA 272
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
L D+ +P ++ VP ++E L SG+ + + + + I Y +
Sbjct: 273 PVLLPDMAVIRPQWICGVPRLWEALASGVIRTMKKTGGLTLKLFNFFIGAGSLYAKMRDY 332
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 398
G N Q L+D + I +LWPLH L + LV++KI++ +G +S
Sbjct: 333 VFG-----NIPQFKKRCRLLDSIIGFIPWILLWPLHKLGDILVFRKIRAKMGGRINIAIS 387
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GGG+L ID FY AIG+ + GYG++E++PV++ R G VG E++IV
Sbjct: 388 GGGALQKDIDDFYRAIGLNLLEGYGMSETAPVVSFRDYRHPRPGVVGVIFPTMEVRIVAE 447
Query: 459 E-----TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
E + E L G +G++ +R QVM+GY+K P T++ LD GWLNTGD+G + +
Sbjct: 448 EHGSIVSMEHLGPGRQGLIVLRSPQVMKGYYKRPDLTEKVLDRAGWLNTGDLGMMTLDNE 507
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
+ + GRAKDTIVL GENVEP+ +E A L S+ I I+V GQD++ GA+
Sbjct: 508 ----------IKITGRAKDTIVLLDGENVEPVIIESALLESNYIESIMVTGQDKKYLGAL 557
Query: 574 IVPDKEEVLMAAKRLSIVHADASEL 598
IVP K+ ++ A ++ + L
Sbjct: 558 IVPVKDALIAFASENNLAYTSYENL 582
>gi|333996558|ref|YP_004529170.1| AMP-binding domain-containing protein [Treponema primitia ZAS-2]
gi|333740669|gb|AEF86159.1| AMP-binding enzyme family protein [Treponema primitia ZAS-2]
Length = 637
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 301/562 (53%), Gaps = 42/562 (7%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
EI A GL +G K + + + SDN WLV+D +L+ GA +V RG S +E+ +I
Sbjct: 42 EIRHVAAGLLELGAKRGDHIGIISDNRQEWLVSDFAVLSIGAADVPRGCDSLEQEIAYIL 101
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE----------I 168
++ VEN + +I + L + + + K+ ++ D V+E +
Sbjct: 102 GFTDCTISFVENQK---QITKILARREELPLL------KTLISYDTVDEKTLEAVKAGGL 152
Query: 169 PVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
V Y+E++ +G + + DA + +D+AT ++TSGTTG PKGVMLTH+
Sbjct: 153 SVCLYEELLKMGEKRHSQNPEEIDAEMNKGQ----GEDLATIIFTSGTTGIPKGVMLTHR 208
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDL 286
N L Q S + + GD +LS+LP WHV+ER+ Y IF G + Y+ + L D
Sbjct: 209 NFLVQQPSFRLVFETKTGDIWLSVLPVWHVFERSIEYVIFYLGNGIAYSKPISSVLLPDF 268
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
Q +P +M+SVP V+E++ + + + + + Y F+ + G L
Sbjct: 269 QNIRPQWMVSVPRVWESIMDWTNRNVKQQGWFWKNWFNFFVNLGIMYNYFRDLTFGL-LP 327
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
+ L A+I + ++C P LA LV+++++ +G +AG+SGGGSLP+
Sbjct: 328 NFHGRIRVLDAIIGFFPWVLLC----PARGLAWLLVFRRVKKRLGGRFRAGISGGGSLPV 383
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
+DLF+ A+G+++Q GYGLTE+SP++A RR +VG + TE +IVD + +L
Sbjct: 384 KVDLFFNAVGLRLQEGYGLTETSPIVAVRRYKAARRNTVGQVLLDTECRIVDNK-GAILQ 442
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G+ G ++VRG QVM+GY++ P T + L +DGW+ TGDI + + +
Sbjct: 443 PGNNGHLQVRGGQVMKGYYRKPEETAKVLFDDGWIETGDIAMMTYDNE----------VR 492
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ GRAKDTIVL GENVEP+ +E S + Q +V+GQDQ+ A+IVP +E ++ A
Sbjct: 493 ITGRAKDTIVLRGGENVEPIPIELKIQESPWVAQCMVVGQDQKYLAALIVPVQEAIMGFA 552
Query: 586 KRLSIVHADASELSKEKTISLL 607
+ +I D L ++ I+ L
Sbjct: 553 EENNIPIVDYDLLLQQPEINEL 574
>gi|325971583|ref|YP_004247774.1| long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
gi|324026821|gb|ADY13580.1| Long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
Length = 639
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 199/574 (34%), Positives = 310/574 (54%), Gaps = 45/574 (7%)
Query: 25 RVFTRNCVDAVATRIRISR-RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
+ F + A +++S+ +N F +L E+ A L GVK + + L SD
Sbjct: 7 QTFEQIVAQYPAYAVQMSKDKNGVFSSTSYLELSSEVNSLAASLSKRGVKRGDLVGLISD 66
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N WL D +L+ GA +V RG + E+ I +E+ VEN ++ L
Sbjct: 67 NRSEWLAGDLAILSLGAADVPRGRDAMPYEISFILGVTEARFCFVENAVQLRKLVNLLDK 126
Query: 144 KAAMRFIILLWGK-KSSVAPDIV--EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYE 200
++ +I++ + +A ++ E++ + Y DL +E R D N AR
Sbjct: 127 LPLLKHLIVMDQEFDMQMAAEVAKPEDVQILFYR---DLVKEGRTLLDDRNVARYIENER 183
Query: 201 TIGS-DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----PAENGDKFLSMLPP 255
G+ D++AT ++TSGTTG+PKGVMLTHKN +Q+ ++ ++ PA+ ++LS+LP
Sbjct: 184 KKGTIDEVATIIFTSGTTGDPKGVMLTHKNFAYQLEAVPKLIQKFAPAQ---RWLSVLPV 240
Query: 256 WHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
WH +ER Y I S + Y+ L DL PH+M SVP ++E + +G+ F
Sbjct: 241 WHSFERILQYVIISNASTIAYSKPLGSILLADLAVVNPHWMGSVPRIWEAVKAGV----F 296
Query: 314 TSSAARRVVARAL----IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
S + +A+ L ++I+ Y+ K + G T ++ ++D L + +
Sbjct: 297 ASMKNKSPIAKGLFAFFVQIARLYSHNKDLLLGEVATFQKRN-----RVLDVLVSFLPTV 351
Query: 370 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 428
+L+PL+ L KLV+ K++ +G + AGVSGGGSL +DLF+ +IG+K+ GYGLTES+
Sbjct: 352 LLYPLYKLGNKLVFSKVKHKLGKNFIAGVSGGGSLSEGVDLFFASIGIKLLDGYGLTESA 411
Query: 429 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 488
PV+A R P + + + TE++IVD EV P G KG+++VRG QVM+GY+K
Sbjct: 412 PVVAVR-PLSHGVKRTITALEGTEVRIVDETGIEVKP-GQKGVIQVRGPQVMKGYYKRQD 469
Query: 489 ATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T + L +DGWL+TGD+G W H G + GRAKDTIVLS GEN+EP+ +
Sbjct: 470 LTDRVLSKDGWLDTGDLGMWT--HK---------GEFAIRGRAKDTIVLSGGENLEPVPI 518
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
E S I VV+GQDQ+ GA+IV +K+ +
Sbjct: 519 EAKLCESEFIESAVVLGQDQKYLGALIVLNKKRI 552
>gi|374317585|ref|YP_005064013.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
gi|359353229|gb|AEV31003.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
Length = 639
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 306/574 (53%), Gaps = 35/574 (6%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F+ S++ ++ A L G+K + + L SDN WLV D +L GA +V RG
Sbjct: 31 FQSIPYSQVFADVDALAASLSRRGIKRGDLVGLVSDNRSEWLVTDLAILTLGAADVPRGR 90
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK------KSSVA 161
+ E+ I + +E+ VEN +I ++ +I++ + +++
Sbjct: 91 DAMPYEISFILSTTEAAYCFVENAVQLRKILNLKEKLPLLKHLIVMDKEFIFESLENTAV 150
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG-SDDIATYVYTSGTTGNP 220
P VE + +FS DL E R +DS R + G D++AT ++TSGTTG+P
Sbjct: 151 PAGVE-VLLFS-----DLLSEGRLLLNDSAQKRHIAEERKKGRGDEVATVIFTSGTTGDP 204
Query: 221 KGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
KGV+LTH+N Q+ L I+ G ++LS+LP WH +ER Y I S+ + Y+
Sbjct: 205 KGVVLTHENFAFQLEELPKIITRFAPGQRWLSVLPVWHSFERILQYTIVSQASAIAYSKP 264
Query: 280 RN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
L DLQ PH+M SVP ++E + +G+ + S + + + + ++ Y K
Sbjct: 265 LGSILLADLQAVNPHWMGSVPRIWEAVKAGVFGSMKNKSPVSQKLFKFFVSVANLYDTNK 324
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
+ G + ++ ID L + + +L+PL+ L + LVY K++ +G + AG
Sbjct: 325 DLLVGDVPSFKKRN-----RFIDVLRSFLPTVLLFPLYKLGDHLVYAKVKEKLGKNFLAG 379
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
VSGGGSL +D F+ +IG+K+ GYGLTESSPVIA R ++ +V P+ +TE+KIV
Sbjct: 380 VSGGGSLSESVDRFFSSIGIKLLDGYGLTESSPVIAVRYFDHSIKRTVS-PLGNTEVKIV 438
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
D N V P G KG++ VRG QVM+GY+K P T + L DGWLNTGD+G I H
Sbjct: 439 DENGNSVAP-GVKGLLMVRGKQVMKGYYKRPDLTAKVLSPDGWLNTGDLG-IWTHD---- 492
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
G + GRAKDTIVLS GEN+EP+ +E +I Q VV+GQD + GA++V
Sbjct: 493 -----GQFSIAGRAKDTIVLSGGENLEPVPIEAKLCECEMIEQAVVVGQDMKYLGALVVL 547
Query: 577 DKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 610
+K+ V I + S LSK K ++ L E
Sbjct: 548 NKKLVEEYLTEQHIPYLSDS-LSKMKEVNELIAE 580
>gi|386347279|ref|YP_006045528.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412246|gb|AEJ61811.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 630
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 286/540 (52%), Gaps = 31/540 (5%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F +L +++L A G +GV + ++L S+N WL+AD G+L GA +V RG
Sbjct: 31 FTPITYRQLLEDVLTCAAGFAALGVGKGDLVALISENRREWLLADMGLLFLGAADVPRGC 90
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ +EL HI +E EN + + + ++ IL + I E
Sbjct: 91 DVTEKELEHILLTAECSIGVFENISQLKKALASERIRTQLKTAILF-----DMPAQIERE 145
Query: 168 ---IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
I V S+ +++ G ++ D E + ++ +AT ++TSGTTG PKGVM
Sbjct: 146 TAGITVLSFSALMERGTQALPGMRDHILT----AVEELPAEALATVIFTSGTTGLPKGVM 201
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNL 282
L+H N LHQ++ + ++ GD +LS+LP WH +ER Y S + Y+ R +
Sbjct: 202 LSHGNFLHQVKGVPILLKVGPGDIWLSVLPVWHSFERMMQYVALSSASAIAYSKPIGRIM 261
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
D+ +P +M SVP ++E + GI + I S + + +A + + AY F + +G
Sbjct: 262 LQDMATLKPTWMASVPRIWEGIRKGILQTIKKESPLVQAIFQASLVVGRAYAFFTHMVKG 321
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 401
L R + +P ++D + I +LWP LA LV++K+ +G AG+SGGG
Sbjct: 322 -ELPRFKWRPR----ILDRVIGIIPFLLLWPFKQLAHLLVFRKLHRKLGGRFVAGISGGG 376
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
+LP +D F++AI + V GYGLTE++PV+A R V +VG TEI+I D E N
Sbjct: 377 ALPPEVDGFFDAIRITVLEGYGLTEAAPVLAVRSYYHPVPHTVGPVFPDTEIQIRDEEGN 436
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
VLP G +G + RG QVM GY K P T++ LDE+GWLNTGD+G + +
Sbjct: 437 -VLPPGRQGTIFARGGQVMLGYLKAPEETRKVLDEEGWLNTGDLGMLTWDNE-------- 487
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
L + GRAKDTIVL GENVEP LE+A L+ +V+GQD++ G +I D++ +
Sbjct: 488 --LAITGRAKDTIVLRGGENVEPAPLEQALKEHPLVAHAMVVGQDEKYLGVLIFVDQDSL 545
>gi|119953377|ref|YP_945586.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119862148|gb|AAX17916.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 643
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 306/573 (53%), Gaps = 39/573 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S E+ GL +K ++++L SD+ W++ D +++ G I+V +G+ SS +E
Sbjct: 38 SDFWNEVKSIGSGLLHYRIKKGDRVALISDSRKEWIIIDIAVMSLGCIDVPKGNDSSEDE 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L++I NHSES + VEN + +I ++ ++++ K + D + I + SY
Sbjct: 98 LVYIINHSESSFVFVENAKQLQKIISKKHELKFVKHVVVIDDDK--LYEDKLGNITIISY 155
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++ LG + K N + E + DIAT +YTSGTTG PKGV+L H++ + Q
Sbjct: 156 KKLLSLGYDYLK----DNPKMFDSELEKVSGKDIATIIYTSGTTGLPKGVVLRHESFIFQ 211
Query: 234 IRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 290
+ + D +P + G +S+LP WH +ER C Y + G+ + Y+ L D
Sbjct: 212 VDRIGDYLPTIKPGKIMISILPLWHSFERTCEYIVALNGMAIAYSKPIGPVLLKDFAALN 271
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PH +ISVP ++E + GI K++ + S +R + ++I Y K + G L K
Sbjct: 272 PHAIISVPRIWEGIRIGIMKRV-SESFFKRFLFNFFLKIGILYIKLKEKFLG--LVPVYK 328
Query: 351 QPSYLVALIDWLWARIIC----AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
+ ++LV++ + ++ C + P L LV++KI+ A+G + GVSGGG+L
Sbjct: 329 RSNFLVSI----FIKVACLTGLIFILPFKFLGHVLVFRKIKKALGKRFEFGVSGGGALVN 384
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
++D F++A+G+ V GYGLTE+ PV++ RR V +VG E ++V + N + P
Sbjct: 385 YVDYFFKAVGIMVLEGYGLTETGPVLSVRRFKSPVANTVGPLFPDIEYRVVGNDGNFLSP 444
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G KG + VR QVM GYFK+ + T++ L DGW TGD+ ++ +
Sbjct: 445 -GEKGELWVRSPQVMSGYFKDDTTTREVLTRDGWFKTGDLVCATINNE----------IS 493
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+ E + A
Sbjct: 494 IVGRSKDTIVLRGGENIEPESIERALSKSLFIENVVVVGQDQKFLGAIIVPNFEVLEKWA 553
Query: 586 KRLSIVHADASELSKEKTISLLYGELRKWTSKC 618
I+ +L ++++ LY SKC
Sbjct: 554 GSNEIIFDSHDDLLSNESVNKLY-------SKC 579
>gi|418696753|ref|ZP_13257757.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421105762|ref|ZP_15566340.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409955363|gb|EKO14300.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410009156|gb|EKO62814.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 287/554 (51%), Gaps = 32/554 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G ++V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCVDVPRGTDSTSDDLRYILNHAECSIAFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
S +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 ------SDQKGTLEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T+V L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSVSTLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G + +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-I 505
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD +
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLL 492
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
W G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G
Sbjct: 493 AWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGH 541
Query: 566 DQRRPGAIIVPDKE 579
DQ+ GA+IVPDKE
Sbjct: 542 DQKTLGALIVPDKE 555
>gi|398341584|ref|ZP_10526287.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 644
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 289/536 (53%), Gaps = 25/536 (4%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R +L Q +L GL IGV +E ++L +D+ RWL G+ G ++V RG+
Sbjct: 40 YRAVSYGELYQIVLRIGLGLTSIGVNRKENVALIADSGHRWLWVSMGITNIGCVDVPRGT 99
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
S+ E+L++I NHSE+ VEN +IA S ++ +++L+ S + P++
Sbjct: 100 DSTPEDLIYILNHSEARVAFVENSVVLRKIASNPDSFPYLK-VVILFEPSSHIGPNL--P 156
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ D++I LG + D + H + E++ D++AT VYTSGTTG PKGVML+H
Sbjct: 157 FKLLHLDDLISLGD---RWIQDKGEMEFHKRGESVSEDELATIVYTSGTTGRPKGVMLSH 213
Query: 228 KNLLHQI-RSL-YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
KN+L + SL D + D+ ++ LPPWH+ ER G +T++ +L D
Sbjct: 214 KNILFNVDMSLSIDDIQFNADDRTMAYLPPWHIAERLIETGCIRIGASEAFTSISSLAQD 273
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
LQ +P +++SVP V+E+ Y+ I + +S R + + +F + +K +G L
Sbjct: 274 LQEIRPTFLLSVPRVWESFYNKIHDKSREASPLARFLFKIFQGAAFTFHKYKSRLQG--L 331
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
++ S A ++ A L+P +LLA + +I++ +G K +SG G+LP
Sbjct: 332 EYMLERISIFREFARRAVALLVVAFLFPANLLA-MAAFSRIRNGLGGRLKFALSGAGALP 390
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+ID F+ +IG+ + GYG+TE V RR +G++G I EIK++D E+
Sbjct: 391 EYIDRFFNSIGIPILEGYGMTELGGVSTRRRLNSITVGTLGRCIPGVEIKLIDERGKEIH 450
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGV 523
G KGI +G VM GY+K+P T + + DGWLN+GD + W G
Sbjct: 451 EPGVKGIAWHKGPHVMMGYYKDPEKTAEII-VDGWLNSGDLLLWT-----------VQGE 498
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L GRAKDTIVLS GEN+EP +E A +S LI Q +++G D++ A++VPD E
Sbjct: 499 LKYAGRAKDTIVLSGGENLEPEPIEFALTQSELILQAMIVGHDKKALSALLVPDWE 554
>gi|418733739|ref|ZP_13290850.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410772920|gb|EKR52952.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 645
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 288/553 (52%), Gaps = 30/553 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G +V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCADVPRGTDSTSDDLRYILNHAECSITFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 FDQKGT------LEDTKSFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD+
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDL- 491
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
+ G L GRAKDTIVL GEN+EP +E A +RS I+Q +VIG D
Sbjct: 492 ---------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIGHD 542
Query: 567 QRRPGAIIVPDKE 579
Q+ GA+IVPD+E
Sbjct: 543 QKTLGALIVPDRE 555
>gi|417772634|ref|ZP_12420522.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681870|ref|ZP_13243092.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418704770|ref|ZP_13265637.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418712874|ref|ZP_13273603.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|421115985|ref|ZP_15576378.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400326387|gb|EJO78654.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409945311|gb|EKN95327.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410012481|gb|EKO70579.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410765383|gb|EKR36083.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410790643|gb|EKR84335.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455669836|gb|EMF34894.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 645
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 288/553 (52%), Gaps = 30/553 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G +V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCADVPRGTDSTSDDLRYILNHAECSITFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 FDQKGT------LEDTKPFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD+
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDL- 491
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
+ G L GRAKDTIVL GEN+EP +E A +RS I+Q +VIG D
Sbjct: 492 ---------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIGHD 542
Query: 567 QRRPGAIIVPDKE 579
Q+ GA+IVPD+E
Sbjct: 543 QKTLGALIVPDRE 555
>gi|24217154|ref|NP_714637.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45655657|ref|YP_003466.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386076113|ref|YP_005990302.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|417759668|ref|ZP_12407702.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417766351|ref|ZP_12414303.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417776506|ref|ZP_12424343.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417786919|ref|ZP_12434604.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418666198|ref|ZP_13227629.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671279|ref|ZP_13232631.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418690921|ref|ZP_13252028.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418725531|ref|ZP_13284149.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421086594|ref|ZP_15547442.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104017|ref|ZP_15564613.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421119509|ref|ZP_15579829.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24202192|gb|AAN51652.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45602628|gb|AAS72103.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353459775|gb|AER04319.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|400351178|gb|EJP03418.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400359957|gb|EJP15938.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409944416|gb|EKN89999.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409949771|gb|EKO04304.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409961168|gb|EKO24915.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410347660|gb|EKO98533.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410366498|gb|EKP21890.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430623|gb|EKP74986.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410573715|gb|EKQ36760.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581540|gb|EKQ49349.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410758145|gb|EKR19744.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 645
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 288/553 (52%), Gaps = 30/553 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G +V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCADVPRGTDSTSDDLRYILNHAECSITFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 FDQKGT------LEDTKSFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD+
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDL- 491
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
+ G L GRAKDTIVL GEN+EP +E A +RS I+Q +VIG D
Sbjct: 492 ---------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIGHD 542
Query: 567 QRRPGAIIVPDKE 579
Q+ GA+IVPD+E
Sbjct: 543 QKTLGALIVPDRE 555
>gi|418699116|ref|ZP_13260083.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|421128285|ref|ZP_15588500.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135813|ref|ZP_15595933.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410020118|gb|EKO86923.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434010|gb|EKP83151.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410761976|gb|EKR28147.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|455793442|gb|EMF45140.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 645
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 288/553 (52%), Gaps = 30/553 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G +V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCADVPRGTDSTSDDLRYILNHAECSITFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 FDQKGT------LEDTKPFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD+
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDL- 491
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
+ G L GRAKDTIVL GEN+EP +E A +RS I+Q +VIG D
Sbjct: 492 ---------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIGHD 542
Query: 567 QRRPGAIIVPDKE 579
Q+ GA+IVPD+E
Sbjct: 543 QKTLGALIVPDRE 555
>gi|328949040|ref|YP_004366377.1| long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
gi|328449364|gb|AEB15080.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
Length = 645
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 314/598 (52%), Gaps = 43/598 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L + +DFA L IGVK +++ L +DN W AD G+L+ GAI+ RG ++ +L
Sbjct: 43 LFENAMDFAGALLDIGVKRGDRVGLIADNREEWEQADVGLLSIGAIDTPRGLDATETDLA 102
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI-VEEIPVFSYD 174
+I + SE VEN ++ S ++ II D +++ +
Sbjct: 103 YILSFSEVEITIVENETQVKKLLNIKKSIPTLKTIISFEEVSEDAKSDCEKQKVTCLWFR 162
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++ G E RK D+ + + E DD+AT ++TSGTTG PKGVML+H N+L Q+
Sbjct: 163 DLQKSGHEWRKQHPDAVEQ----ELEKGKPDDLATIIFTSGTTGTPKGVMLSHGNILCQL 218
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPH 292
+ + + G++ L +LP WH ++RA Y I ++G L Y+ L DLQ+ P+
Sbjct: 219 DEVTERIFLNPGERALLVLPVWHAFQRAVEYVIIAQGGTLCYSKPIGSVLLQDLQKLDPY 278
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRIYEGFCLTRNQKQ 351
+ +VP V+ +Y GI +++ + +A AL R A + +I +
Sbjct: 279 LLPAVPRVWSAVYEGIWRKMRKTGG----IAFALFRFFVAEALLWSKIDRKLRRKNTRFS 334
Query: 352 PSYL---VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
P YL ++ W W +L+P+ LL LV++KI++ +G + ++G++GGG+ P ++
Sbjct: 335 PDYLGFWWPVLVWPW-----LLLYPIKLLGNLLVFRKIRAMVGKNFRSGIAGGGAFPKNV 389
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
D F+ AIGV +Q GYGLTE+SP+I+ R + G+VG P+ E+++VD + +L
Sbjct: 390 DEFFWAIGVNIQEGYGLTETSPIISVRPIADPIFGNVGTPLRGMEVRVVD-DDGIILGRC 448
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
KG ++++G VMQGY+K P T + + DGW +TGDI ++ ++ + L
Sbjct: 449 KKGTLQIKGDCVMQGYYKRPDLTDKVMTVDGWFDTGDIAILSVNNE----------IQLR 498
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ-----DQRRPGAIIVPDKEEVL 582
GR KDTIVL GEN+EPL +E S I VV G DQ+ A+I+PD++ +
Sbjct: 499 GRKKDTIVLQGGENIEPLPIEAKINESRFISTSVVFGTNEKGIDQKYLVALILPDQDAIE 558
Query: 583 MAAKRLSIVHADASELSKEKTIS-LLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 634
A I EL++ + I LL GE+ ++K F+ I I V+ +PF V
Sbjct: 559 TYATENGINFNSYDELAETEAIQKLLEGEVFESISAKNGFKSFERINKIAVITKPFEV 616
>gi|418710506|ref|ZP_13271276.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410769095|gb|EKR44338.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|456966688|gb|EMG08222.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 645
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 287/553 (51%), Gaps = 30/553 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G +V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCADVPRGTDSTSDDLRYILNHAECSITFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E F + DL + + + H + I +D+AT VY
Sbjct: 145 FDQKGT------LENTKPFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD+
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDL- 491
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
+ G L GRAKDTIVL GEN+EP +E A +RS I+Q +VIG D
Sbjct: 492 ---------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIGHD 542
Query: 567 QRRPGAIIVPDKE 579
Q+ GA+IVPD+E
Sbjct: 543 QKTLGALIVPDRE 555
>gi|398334342|ref|ZP_10519047.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 583
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 301/553 (54%), Gaps = 34/553 (6%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRV-IGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+N F ++ + + A GL + +K E +++ S+N W++A+ G+L +GA +
Sbjct: 32 KNKEFVTVTFREVYESGVALATGLIADLDLKAREHVAVLSENRKEWIIANYGILLSGAAD 91
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V RG+ + ++ +I HS++ + VEN ++ L + I+L+ +++ +
Sbjct: 92 VPRGTDVTDGDIRYILPHSDAKIVFVENEVILKKVRNNLSHLPNVTHIVLM-DEEARITD 150
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D + ++I G+E R + + + + R I DD+ T +YTSGTTG PKG
Sbjct: 151 D-----NIIRMADLIAKGKELRASGNRNVEER----VAAIRPDDLFTIIYTSGTTGEPKG 201
Query: 223 VMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
VMLTH N++ Q+R+ +P E G D+FLS+LP WH +ER + G YT +R
Sbjct: 202 VMLTHANMISQLRN----IPIEIGPKDRFLSILPVWHSFERVFQMGTIATGAGQYYTNIR 257
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
N+K+DL +P +M S P ++E ++ GIQ +I + S +R++ ++ + +
Sbjct: 258 NIKEDLLIVKPTFMASAPRLWENIFHGIQSKIQSGSTLKRILFKSAYFCALKVQRALNFF 317
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSG 399
+G L + + L +L + + + I +++ + +V KKI+ A G G VSG
Sbjct: 318 KGNELDLEGR--NILKSLCMFGQSVLNIVIFSIPYMILDLIVLKKIRQATGGKLRGTVSG 375
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
GG+LP HID F+ IG+ + GYGLTE+SP +A R P V+GSVG EI + D E
Sbjct: 376 GGALPFHIDEFFNVIGIPLFEGYGLTETSPGLAFRTPDHLVIGSVGPLFPEVEILLKDVE 435
Query: 460 TNEVL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
+L G KG V VRG Q+M+GY+K P T + + +DGW NTGD+G I +++
Sbjct: 436 NGNILYPPQKGVKGEVHVRGPQIMKGYYKRPDVTAKVI-QDGWFNTGDLGLITYNNT--- 491
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
L + GR K+T+VL GEN+EP+ +E +S I Q++V+GQDQ+ A+++P
Sbjct: 492 -------LKIVGRTKETVVLLNGENIEPVPIENKLAQSPFIDQVMVVGQDQKFLTALVLP 544
Query: 577 DKEEVLMAAKRLS 589
+ L + LS
Sbjct: 545 VLDRFLGLRENLS 557
>gi|408793900|ref|ZP_11205505.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461135|gb|EKJ84865.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 671
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 180/586 (30%), Positives = 307/586 (52%), Gaps = 33/586 (5%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+Q + + G +GV+ +++ F D + WL D +L +GA+ V RG+ EE+L
Sbjct: 80 LKQFVDHLSLGFIELGVEVGDRIGFFCDATVNWLRTDISILTSGAVVVPRGTDIVREEIL 139
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I NHSE+ L V+ P+ RI + L ++ I +L + + +
Sbjct: 140 YILNHSEAKFLVVQKPKDKKRIDDLLGELPHLKQIFILENDQGDLYT---------GENS 190
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I+ + + + + + + D ++T +YTSGTTGNPKGVML+ K + I+
Sbjct: 191 ILSIAEKGNERWGQNGKQTLENRIRQTDPDALSTLIYTSGTTGNPKGVMLSQKGWITAIQ 250
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMI 295
+ + + D +S+LPPWH +ERA Y GI+ + + + +LKDDL+ ++P
Sbjct: 251 NTISRLDMNSNDNAVSLLPPWHAFERAIEYAGIFLGIDFLVSNMSSLKDDLRDFRPTIFP 310
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
SVP ++E++Y+GI ++ + + +R + + + GF K+P+++
Sbjct: 311 SVPRIWESVYNGIIAKVAKEGGFKEKLFHFFLRFGSTWAHYYAMCFGFEF--EIKKPNFI 368
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
V+L+ +A +I L PL L++ + ++ I A+G + +S G +LP +D F AI
Sbjct: 369 VSLVKRTYAFLILVFLSPLKLISIQ-IFSAIHKALGGRIRICISAGSALPSVVDGFLSAI 427
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+KV GYG+TE+S V++ R T G+VG PI +I++ D + G+KG + +
Sbjct: 428 GLKVLEGYGMTETSAVVSIRSNTKPTKGTVGIPIAGYQIRLKDDTGKILTDVGAKGTLWI 487
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+ Q+++GY+K P + D DG+ +TGD+ I+ + LV GR+KDTI
Sbjct: 488 KSKQILKGYYKRPELNQVVFDTDGFFDTGDLMMISHRNE----------LVFAGRSKDTI 537
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
L GENVEP+ +E+ L SS I Q++V+G D++ GA+IVP+ E V K I
Sbjct: 538 ALIGGENVEPIPIEDKLLTSSFIDQVMVVGHDKKTLGALIVPNFEAV--ETKIPGISKEK 595
Query: 595 ASELSKEKTISLLY-GELRKWTSKCS----FQIGP---IHVVDEPF 632
A E + + LY E+ + S+ + F++ P +VV PF
Sbjct: 596 ADEWNANPKVRELYRAEISRIISRENGFKGFEMIPANNFYVVPRPF 641
>gi|187918016|ref|YP_001883579.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119860864|gb|AAX16659.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 631
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 320/601 (53%), Gaps = 56/601 (9%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L FA L+ +G+ ++K+ + S+N W V D +LA GA++V +GS + E
Sbjct: 37 LKNNVLKFAAFLKKMGLGYQDKVFICSENRIEWSVIDFAILALGAVDVPKGSDVTLFEAE 96
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I N+ + VEN + + + + II ++ + V++Y E
Sbjct: 97 VIINNIFPNIIIVENLNLLDLVVQVNFEIKPVVVIIDDLDERDKIR---FSNFQVYTYKE 153
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I +G +SR+ D + I DD+AT +YTSGTTGNPKGVML+H N L+Q+
Sbjct: 154 CISIGDKSRR------DEEIIETFNNINPDDMATIIYTSGTTGNPKGVMLSHANFLYQVS 207
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S ++ G F+ +LP WH ++R+ Y IF +G+ +++++ RN+ DD++ PHY
Sbjct: 208 SFSRMISTSEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSSIVPRNMLDDIKNINPHY 267
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--------SFAYTAFKRIY--EGF 343
+ +VP L+ I++ IF A + +AR L ++ Y +Y GF
Sbjct: 268 IAAVP----RLWIAIKQNIFKEVAKKPFLARLLFKVFVKAACLNDICYRIISGLYPDNGF 323
Query: 344 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 402
L K+ ++ L+ IL+PL +L + +V+KKI+ +G + G++GGGS
Sbjct: 324 DLLMPMKKILGILGLV----------ILFPLKILGDLIVFKKIKKVLGDNFVVGITGGGS 373
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
+ + + F+ +IG+++ YGLTE+SP +A+ +LG+ G + T +I D N+
Sbjct: 374 MSLFVVRFFNSIGIELANAYGLTEASPGVASDEHGKIMLGTCGKILPGTVAEIRDENGNK 433
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
+ G KG++ ++G QVM GY+++ AT+Q + +DG+LNTGDI ++ +
Sbjct: 434 LKKPG-KGVLFIKGPQVMLGYYQDEDATRQVIGDDGFLNTGDIVKLSKDN---------- 482
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
V+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VVRIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEIN 542
Query: 583 M----AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFT 633
+++ H ++ + + E+RK +K + QI ++++PF
Sbjct: 543 KYLESMGQKIFDAHNRQQIIANNIVLKAINDEIRKLINKANGFKPFEQILRFVLLEKPFE 602
Query: 634 V 634
V
Sbjct: 603 V 603
>gi|421131450|ref|ZP_15591632.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357233|gb|EKP04500.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 286/554 (51%), Gaps = 32/554 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G ++V RG+ S+ ++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCVDVPRGTDSTLDDLRYILNHAECSIAFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
S +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 ------SDQKGTLEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQDLEYSLMEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G + +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-I 505
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD +
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLL 492
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
W G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G
Sbjct: 493 AWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGH 541
Query: 566 DQRRPGAIIVPDKE 579
DQ+ GA+IVPDKE
Sbjct: 542 DQKTLGALIVPDKE 555
>gi|398346067|ref|ZP_10530770.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 644
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 288/536 (53%), Gaps = 25/536 (4%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R +L Q +L GL IGV +E ++L +D+ RWL G+ G ++V RG+
Sbjct: 40 YRAVSYGELYQIVLRIGLGLTSIGVNRKENVALIADSGHRWLWVSMGITNIGCVDVPRGT 99
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
S+SE+L++I NHSE+ VEN +IA S ++ +++L+ S + P++
Sbjct: 100 DSTSEDLIYILNHSEARVAFVENSVVLRKIASNPDSFPYLK-VVILFEPSSHIGPNL--P 156
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ D++I LG + D + H + E++ D++AT VYTSGTTG PKGVML+H
Sbjct: 157 FKLLHLDDLISLGD---RWIQDKGEMEFHKRGESVSEDELATIVYTSGTTGRPKGVMLSH 213
Query: 228 KNLLHQI-RSL-YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
KN+L + SL D + D+ ++ LPPWH+ ER G +T++ +L D
Sbjct: 214 KNILFNVDMSLSIDDIQFNADDRTMAYLPPWHIAERLIETGCIRIGASEAFTSISSLGQD 273
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
LQ +P +++SVP V+E+ Y+ I ++ +S R + + + + +K G L
Sbjct: 274 LQEIRPTFLLSVPRVWESFYNKIHDKLREASPFGRFLFKIFQGTASTFHKYKSRLLG--L 331
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
++ S A ++ A L+P +LLA + KI+ +G K +SG G+LP
Sbjct: 332 EYMLERISIFREFARRAVALLVVAFLFPANLLA-MTAFSKIRKGLGGKLKFALSGAGALP 390
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+ID F+ +IG+ + GYG+TE V RR +G++G I EIK++D + E+
Sbjct: 391 EYIDRFFNSIGIPILEGYGMTELGGVSTRRRLNSITVGTLGRCIPGVEIKLIDEQGKEIH 450
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGV 523
G KGI +G VM GY+K+P T + + DGWLN+GD + W G
Sbjct: 451 EPGVKGIAWHKGPHVMMGYYKDPEKTAEII-VDGWLNSGDLLLWT-----------VQGE 498
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L GRAKDTIVL GEN+EP +E A +S LI Q +++G D++ A++VPD E
Sbjct: 499 LKYAGRAKDTIVLLGGENLEPEPIEFALTQSELILQAMIVGHDKKALSALLVPDWE 554
>gi|418679673|ref|ZP_13240934.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418684543|ref|ZP_13245727.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740250|ref|ZP_13296628.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421088000|ref|ZP_15548829.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|400320115|gb|EJO67988.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003256|gb|EKO53701.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410740743|gb|EKQ85457.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752254|gb|EKR09229.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 286/554 (51%), Gaps = 32/554 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G ++V RG+ S+ ++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCVDVPRGTDSTLDDLRYILNHAECSIAFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
S +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 ------SDQKGTLEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G + +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-I 505
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD +
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLL 492
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
W G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G
Sbjct: 493 AWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGH 541
Query: 566 DQRRPGAIIVPDKE 579
DQ+ GA+IVPDKE
Sbjct: 542 DQKTLGALIVPDKE 555
>gi|384252453|gb|EIE25929.1| long-chain-fatty-acid CoA ligase [Coccomyxa subellipsoidea C-169]
Length = 476
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 214/356 (60%), Gaps = 42/356 (11%)
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GVMLTH NL +Q+ +L + + G++ LS+LPPWH+YER+CGY++FSR +YT +R
Sbjct: 95 GVMLTHGNLKYQMDNLSFFLKPKPGERSLSLLPPWHIYERSCGYYLFSRACTQVYTNIRK 154
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
++DL Y PH+ + VP+V +TLY +Q+QI SS +R +AR I AY +RI +
Sbjct: 155 FREDLSAYPPHHFVCVPMVLDTLYGRVQQQIKKSSLVKRTIARLFFAIGAAYIRARRILD 214
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGG 401
G LV+ KI++A+GI +SGGG
Sbjct: 215 GV-------------------------------------LVFGKIRAALGIMSTVISGGG 237
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAE 459
SL H+D FYE + + V G+GLTE+SPV++ RR NV GSVG PI T +++VD E
Sbjct: 238 SLARHLDDFYETLALPVLNGWGLTETSPVLSCRRDATRENVRGSVGLPIPGTVVRVVDPE 297
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA-LDEDGWLNTGDIGWIAPHHSRGRSR 518
T +P G +G++ +G VM+GYF + +AT +A + DGW +TGD+GW AP G +
Sbjct: 298 TLRPVPEGQQGLLLAKGPGVMKGYFNDEAATAKAFVAGDGWFDTGDLGWRAPTGVAGSN- 356
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G +VL GRAKDTIVLS+GENVEP +E+A S I+ +V++GQD R GA++
Sbjct: 357 -MAGHIVLTGRAKDTIVLSSGENVEPAPIEDACAVSPFIQHLVLVGQDHRMLGALV 411
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+LE +I+ FA GLR + +KP +K++LFS+NS RWLVADQ ++ GA + VRG+ S +EE+
Sbjct: 32 ELESQIIQFAAGLRALSLKPGDKVALFSENSSRWLVADQAVMTLGAADAVRGASSPAEEM 91
Query: 115 LHI 117
+I
Sbjct: 92 AYI 94
>gi|381181399|ref|ZP_09890233.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380766619|gb|EIC00624.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 652
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 296/583 (50%), Gaps = 39/583 (6%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ ++ F + S++ Q +++ A R +G+K + + L +DN WL+ D +L+ GA
Sbjct: 34 VKNKSGVFVRYSYSQVYQHVIEMASSFRKLGIKKGDNVGLMADNRREWLITDFALLSLGA 93
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
++V RG S E+ I N +E EN + ++ E ++ +L + SV
Sbjct: 94 VDVPRGCDSMGVEMRFILNFAECRVCFFENSKQLEKVLEKAEEVPLLKTAVLFDYFEDSV 153
Query: 161 APDI-VEEIPVFSY----DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
D I V +Y E +++ R+ D I DD+AT ++TSG
Sbjct: 154 VRDARARGIEVVNYHFLESEGVNVTRDEWLEIERGMDE--------ISPDDVATIIFTSG 205
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVP-AENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
TTG PKGV LTH N + Q + ++ + GD +L++LP WH +ERA Y + +
Sbjct: 206 TTGLPKGVQLTHDNYIAQCEVAHSVLGLMQPGDIWLTVLPIWHSFERAFCYMVVALEGGF 265
Query: 275 MYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
Y+ + D+ QP +M VP ++E + G+ +++ S ++ I +
Sbjct: 266 AYSKPIASVMLQDMNLIQPQWMNVVPRLFEAVAQGLFREVKKQSGMQQFFFHNAIIVGKM 325
Query: 333 YTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y K G C R + ++D LW + +LWPLH++ E +YKK+++ G
Sbjct: 326 YYKMKERVLGLRCRYR------WYPRVLDVLWGIVPFVLLWPLHMIGEVTLYKKLRARFG 379
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
+ +A +SGGG+L + FY AIG + GYG+TE +PVI+ R +VG
Sbjct: 380 GNFRAVISGGGALQPGTEAFYHAIGFNLLEGYGMTECAPVISVRNSKKPRSNNVGWVFPS 439
Query: 451 TEIKIV-----DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
++KIV E+ E L G +GI+ VRG QVM+GY+K P T+ +D +GWLNTGD+
Sbjct: 440 FDVKIVAEKDGKVESGEPLKPGRRGIIMVRGRQVMKGYYKRPDLTEGVVDSEGWLNTGDL 499
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G I+ L + GR KDTIVL GEN+EP +E+A S I + VV+GQ
Sbjct: 500 GMISYDEE----------LKIVGRTKDTIVLLGGENIEPQVIEKAVNSSPYIERTVVVGQ 549
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
D+R GA+IVPD+ VL A+ +I++ + L + I L+
Sbjct: 550 DKRYLGALIVPDQHSVLSYAEENNILYDNYEALLETNEIQNLF 592
>gi|386826469|ref|ZP_10113576.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
gi|386427353|gb|EIJ41181.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
Length = 640
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 201/615 (32%), Positives = 313/615 (50%), Gaps = 52/615 (8%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ ++N + L + L+ A GL +GV+ + L +DN W+ AD + GA
Sbjct: 27 VYKKNKEWTPVSFQDLYESGLNLATGLISVGVEARSHVGLLADNRIEWIYADCAVQLCGA 86
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
+V RGS S ++ +I H+E + VE+ ++ ++ IIL+ + +
Sbjct: 87 ADVPRGSDVSQADIAYILQHAEVSVVFVEDVALLKKVQA--VELPLIKIIILMDNQGYTE 144
Query: 161 APDIVEEIP-VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
D P V S +++LG++ R D + + I D+ T +YTSGTTG
Sbjct: 145 GSD-----PRVQSLYTLMELGKQRRA----QGDRQVEERVAGILPSDLFTLIYTSGTTGT 195
Query: 220 PKGVMLTHKNLLHQIRSLYD----IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
PKGVML H N++ QI S+ D +VP D+FLS+LP WH++ER G
Sbjct: 196 PKGVMLPHSNMIAQIASVQDLPIQVVPE---DRFLSILPVWHIFERVIEMVAVYYGAPTY 252
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
YT VR L +DL+ +P M S P ++E++Y I + +S R+ + + +
Sbjct: 253 YTNVRQLAEDLKTVRPTLMASAPRLWESIYQRILATLKNASPIRKTLFNLAYACARQFHL 312
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISK 394
+ +G L + + L R+ AI + + L + +V K+++ G +
Sbjct: 313 AQDFLKGNQLDITGRSAAESAGLTVLNLGRL--AIFFLPYKLLDTIVLSKLRAVTGGCFR 370
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
VSGGG+LP HID F+ IG+ + GYGLTE V++ R V+G+VG T I+
Sbjct: 371 GTVSGGGALPRHIDEFFNFIGIPILEGYGLTEGM-VLSVRTFGQRVIGTVGVLFPITTIR 429
Query: 455 IVDAETNEVL---PA------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
IVD TNEVL PA G +G + V+G QVM Y+KN AT +A EDGWLNTGD+
Sbjct: 430 IVDINTNEVLYPNPAKKGEGRGLQGEIHVKGEQVMHSYYKNDEATAKAFKEDGWLNTGDL 489
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G ++S L + GR+KDTIVL GENVEP+ +E +S LI Q +++GQ
Sbjct: 490 GIFTFNNS----------LKITGRSKDTIVLLGGENVEPVPIETRLCQSDLIEQCMLVGQ 539
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS--LLYGELRKWTSKCSFQ-- 621
D++ G ++VP L K+L I + +ELS++ + L+ ++K F+
Sbjct: 540 DKKTIGVLLVP----ALEGFKKLGITAENVAELSQQPAVREHLVQAVKTLISTKQGFKPF 595
Query: 622 --IGPIHVVDEPFTV 634
I ++V+D+PF V
Sbjct: 596 EVIQDVYVLDKPFEV 610
>gi|410942242|ref|ZP_11374029.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410782497|gb|EKR71501.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 286/554 (51%), Gaps = 32/554 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGPRWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G ++V RG+ S++++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCVDVPRGTDSTADDLRYILNHAECSIAFLENEIALKKVLSQKSEFPHLKRIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
S +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 ------SDQKGTLEDTKTFEIILLNDLIEKGKTWIQNKGRDEFHKRGSAILEEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y ++ + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YRHLSRLQDLEYSLVEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-I 505
I +IK++D + NE+ G KGI +G VM+GY+K P TK L DGWLN+GD +
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKDILSSDGWLNSGDLL 492
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
W G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G
Sbjct: 493 AWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGH 541
Query: 566 DQRRPGAIIVPDKE 579
DQ+ GA+IVPDKE
Sbjct: 542 DQKTLGALIVPDKE 555
>gi|398338188|ref|ZP_10522891.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
Length = 645
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 285/554 (51%), Gaps = 32/554 (5%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G ++V RG+ S+ ++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCVDVPRGTDSTLDDLRYILNHAECSIAFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
S +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 ------SDQKGTLEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDGALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G + +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-I 505
I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD +
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLL 492
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
W G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G
Sbjct: 493 AWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGH 541
Query: 566 DQRRPGAIIVPDKE 579
DQ+ GA+IVPDKE
Sbjct: 542 DQKTLGALIVPDKE 555
>gi|219684804|ref|ZP_03539746.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219671749|gb|EED28804.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 630
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 291/535 (54%), Gaps = 39/535 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LRNNVLKLASFLKSINVKHQDKIFICSENRAEWAVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + + +EN N + + + II K+ + + +++Y +
Sbjct: 96 IIFNSALPSVVVLENLNLLNMFVQIKFTVKPIFIIIENLNKEDRLK---YSDFEIYTYGD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTGNPKGVML+H NLL+Q+
Sbjct: 153 CISFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGNPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFGLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F Y +Y GF L
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRTVMGLYPDNGFNLFC 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ + L IC L+P L L++ K+ +G + G++GGGS+P+
Sbjct: 327 PIKKILGIFGL--------IC--LFPFKALGNILIFNKLNKILGNNFVVGITGGGSMPLS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 377 VARFFNSIGIELANAYGLTETSPGVASNKHKKLIIGTCGKILPGTVAEIRDADGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT++ + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATRRIIGPDGFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 486 IGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|119952940|ref|YP_945149.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119861711|gb|AAX17479.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 630
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 291/545 (53%), Gaps = 27/545 (4%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
+I R N + L+ +L FA L+ +G+ ++K+ + S+N W V D +LA G
Sbjct: 20 QIYRSNKDYFNVTYEDLKNNVLKFAAFLKKMGLGYQDKVFICSENRIEWSVIDFAILALG 79
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
A++V +G+ + E I N+ + VEN + + + + II +K
Sbjct: 80 AVDVPKGADVTLFEAEVIINNVLPNIIIVENLNLLDSVVQINFKVDPIIVIIDDLDEKDK 139
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ +++Y E I +G +SR+ D I DD+AT +YTSGTTGN
Sbjct: 140 IQ---FGNFKIYTYKECISIGDKSRR------DEEIIEILSNINPDDMATIIYTSGTTGN 190
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
PKGVML+H N L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++++
Sbjct: 191 PKGVMLSHANFLYQVSSFSRMINTSEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSSI 250
Query: 280 --RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
RN+ DD++ PHY+ +VP L+ I++ IF A + ++ L +I
Sbjct: 251 VPRNMLDDMKNVNPHYIAAVP----RLWIAIKQNIFKEVAKKPFFSKLLFKIFVKSACLN 306
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
I L L+ + L + +PL +L + +V+KKI+ +G + G
Sbjct: 307 DICYRIILGLYPDNGFDLLFPMKKLLGILGLIFFFPLRVLGDLIVFKKIKKVLGNNFVVG 366
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
++GGGS+ + + F+ +IG+++ YGLTE+SP +A+ ++G+ G + T +I
Sbjct: 367 ITGGGSMSLSVVRFFNSIGIELANAYGLTEASPGVASNEHEKIMIGTCGRILPETVAEIR 426
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
D N++ G KGI+ ++G QVM GY+++ AT+Q + DG+LNTGDI ++ +
Sbjct: 427 DENGNKLKTPG-KGILFIKGPQVMIGYYQDEDATRQVIGSDGFLNTGDIVKLSKDN---- 481
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
V+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P
Sbjct: 482 ------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILP 535
Query: 577 DKEEV 581
+ EE+
Sbjct: 536 NFEEI 540
>gi|51598401|ref|YP_072589.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51572972|gb|AAU06997.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 630
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 313/597 (52%), Gaps = 48/597 (8%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWAVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II K+ + + +++Y +
Sbjct: 96 IIFNSVLPSVVVLENLNLLNMFVQIQFAVKPIFIIIENLNKEDRLK---YSDFEIYTYGD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK + A K + S+D+AT +YTSGTTGNPKGVML+H NLL+Q+
Sbjct: 153 CISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGNPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY------EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F RI GF L
Sbjct: 267 IAAVPRLWIAIRQNINKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLYPDNGFNLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ + LI L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGITGGGSMPLS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 377 VSRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATCRIIGPDSFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+ +
Sbjct: 486 IGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEINKYLE 545
Query: 587 RLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
+ DA+ +S + + E++K ++ + QI ++++PF V
Sbjct: 546 SVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|302338016|ref|YP_003803222.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
gi|301635201|gb|ADK80628.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
Length = 634
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 292/542 (53%), Gaps = 31/542 (5%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
F+ L IGV+ + + SDN W++AD ML G ++V RGS S+++E+ +I H+E
Sbjct: 48 FSCALNDIGVERGAHVGIISDNRKEWILADLAMLGLGVVDVPRGSDSTADEIAYILGHAE 107
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
EN ++I ++ IIL +S + + + + S+DE++ G E
Sbjct: 108 CEIAFAENGAQADKIIANAHDLPLLKRIILFDASRSP-SKKLPSSLELSSFDEMMKRGSE 166
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
D D + + +D+AT +YTSGTTG PKGVML H++ + Q+ +YD +
Sbjct: 167 LLPQKQDFFDK----EIDKGSLNDLATIIYTSGTTGEPKGVMLPHRSFIFQLDRVYDHIQ 222
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLV 300
G LS+LP WH +ERA Y + +RG + Y+ + D+Q+ +P ++ SVP +
Sbjct: 223 IVPGHILLSVLPVWHSFERAVEYIMLARGAAIAYSKPIGAVMLPDMQKVKPQWLASVPRI 282
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E + + I K I ++++ + + ++A F + ++K P + V
Sbjct: 283 WEGVRAAIFKNISKEGKVKQLLFSFFVTVGELHSAM------FNMVTDRK-PDF-VGRHR 334
Query: 361 WLWARIICAILW---PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 416
WL + L P LL LV+ K+++ +G AG+SGGG+LP ++D F++A G+
Sbjct: 335 WLDILLAIIPLILLTPFQLLGSLLVFGKLKARLGGKFIAGISGGGALPPYVDRFFQAAGI 394
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYGLTE+ PV+A R+ V G+VG + E ++VD E VLP G KG++ V+
Sbjct: 395 LLLEGYGLTETGPVLAVRKQKHPVHGTVGPLLADIEHRVVDRE-GVVLPPGRKGVLYVKS 453
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
QVM GY+K AT+ L DGWLNTGDI R G +L GRAK+TIVL
Sbjct: 454 PQVMDGYYKREEATEAVL-HDGWLNTGDITLFT---------RQGEFKIL-GRAKETIVL 502
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GEN+EP+ +EE S I Q +V+GQD++ A+IVP+ E++ A+ I + A
Sbjct: 503 LGGENIEPVPIEEHLCASDAIAQAMVVGQDKKFLAALIVPEMEKLQQYAQEKGISYIQAE 562
Query: 597 EL 598
EL
Sbjct: 563 EL 564
>gi|219685905|ref|ZP_03540709.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219672547|gb|EED29582.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 630
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 290/535 (54%), Gaps = 39/535 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LRNNVLKLASFLKSINVKHQDKIFICSENRAEWAVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + + +EN N + + + II K+ + + + +Y +
Sbjct: 96 IIFNSALPSVVVLENLNLLNMFVQIKFTVKPIFIIIENLSKEDRLK---YSDFEIHTYGD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTGNPKGVML+H NLL+Q+
Sbjct: 153 CISFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGNPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFGLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F Y +Y GF L
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRTVMGLYPDNGFNLFC 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ + L IC L+P L L++ K+ +G + G++GGGS+P+
Sbjct: 327 PIKKILGIFGL--------IC--LFPFKALGNILIFNKLNKILGNNFVVGITGGGSMPLS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 377 VARFFNSIGIELANAYGLTETSPGVASNKHKKLIIGTCGKILPGTVAEIRDADGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT++ + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATRRIIGPDGFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 486 IGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|224532255|ref|ZP_03672887.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511720|gb|EEF82126.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 630
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 315/597 (52%), Gaps = 48/597 (8%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWAVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN + + + + II K+ + + +++Y +
Sbjct: 96 IIFNSVLPCVVILENLNLLDMFVQIQFTVKPIFIIIENLNKEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK + A K + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTQLGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F Y A Y GF L
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRAVMGFYPDSGFSLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ + LI L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PIKKILGMFGLI----------FLFPFKALGNILIFNKINKILGNNFVVGITGGGSMPIS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ AIG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 377 VVRFFNAIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATCRIIGSDGFLNTGDIVKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+ +
Sbjct: 486 IGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEINKYLE 545
Query: 587 RLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
+ DAS ++ + + E++K ++ + QI ++++PF V
Sbjct: 546 SVGQKIFDASNRRQIIANNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|408670769|ref|YP_006870840.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407240591|gb|AFT83474.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 630
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 183/597 (30%), Positives = 312/597 (52%), Gaps = 48/597 (8%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GAI++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWAVIDFAILSLGAIDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II K+ + + +++Y +
Sbjct: 96 IIFNSVLPSVVVLENLNLLNMFVQIQFTVKPIFIIIENLNKEDRLK---YSDFEIYTYGD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK + A K + S+D+AT +YTSGTTGNPKGVML+H N L+Q+
Sbjct: 153 CISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGNPKGVMLSHANFLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKSINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY------EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F RI GF L
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLYPDNGFNLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ + LI L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGITGGGSMPLS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 377 VARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATCRIIGADSFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR KDTIVL+ GENVEP +E S LI + +V+GQDQ+ GA+I+P+ EE+ +
Sbjct: 486 IGREKDTIVLNNGENVEPAPIEIKLEESILIEKAIVVGQDQKFLGALILPNFEEINKYLE 545
Query: 587 RLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
+ DA+ +S + + E++K ++ + QI ++++PF V
Sbjct: 546 SVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|203287602|ref|YP_002222617.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201084822|gb|ACH94396.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 629
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 292/545 (53%), Gaps = 27/545 (4%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
+I + N + + L++ +L FA LR I ++ ++K+ + S+N W V D +L+ G
Sbjct: 20 QIYKNNKDYFKVTYADLKENVLKFASFLRKINLRYQDKVFICSENRIEWSVIDFAILSLG 79
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
A++V +G + E I N+ + VEN + + I + +I +K
Sbjct: 80 AVDVPKGIDITLFEAEIIINNIVPNVIIVENVDLLDLIIKLKFQIKPTVIVIDDLYEKDK 139
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ E V++Y E I +G +R+ D I +D+AT +YTSGTTGN
Sbjct: 140 LR---FSEFEVYTYKECILIGENARQ------DEEIIETVNNISLNDMATIIYTSGTTGN 190
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
PKGVML+H N L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ +
Sbjct: 191 PKGVMLSHANFLYQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNI 250
Query: 280 --RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
RN+ DD++ PHY+ +VP L+ I++ I + + R L RI +
Sbjct: 251 VPRNMLDDIRNINPHYIAAVP----RLWIAIKQNIVKEISKKNFFVRLLFRIFVKFACIS 306
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
I L L+ + + + +L+PL++L +V+KKI+ +G + G
Sbjct: 307 DICRRIILGLYPDNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVG 366
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
+SGGGS+P+++ F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I
Sbjct: 367 ISGGGSIPLYVVRFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIR 426
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
D E L KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ +
Sbjct: 427 D-ENGVKLKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN---- 481
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
V+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P
Sbjct: 482 ------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILP 535
Query: 577 DKEEV 581
+ EE+
Sbjct: 536 NFEEI 540
>gi|359688035|ref|ZP_09258036.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418747832|ref|ZP_13304127.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418758109|ref|ZP_13314293.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384114816|gb|EIE01077.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404276682|gb|EJZ43993.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 644
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 284/521 (54%), Gaps = 31/521 (5%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
GL IGVK E + L +D+ RW+ A G+ G+++V RG+ S+ E+L++I NHS++
Sbjct: 58 GLVSIGVKKGENVGLIADSGHRWIWASMGITNIGSVDVPRGTDSTLEDLIYILNHSKAEV 117
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
N E +++ + S ++ +IL +SS + + DE+I LG +
Sbjct: 118 CFAGNSEVVRKLSSSSASFPHLKTVILF---ESSHHSEQRHPFKLLHLDELISLGD---R 171
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR---SLYD--I 240
+ + H + E+I D+AT VYTSGTTG PKGVML+H+N++ + SL D I
Sbjct: 172 WIQEKGELEFHSRGESIQESDLATIVYTSGTTGRPKGVMLSHRNIVFNVNMSLSLDDVRI 231
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
P D+ ++ LPPWH+ ER G +T++ +L DLQ +P +++SVP V
Sbjct: 232 TPE---DRTMAYLPPWHIAERLIETACVRAGASEAFTSISSLGQDLQDIKPTFLLSVPRV 288
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E+ Y+ +Q ++ +S + + ++ + +Y +K G L + K S+
Sbjct: 289 WESFYNKVQDKLKDASPVAKFIFKSFQSAANSYYKYKSRLLG--LEFSLKPRSFFGEFFH 346
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
+ + + W + + +L++ KI+ ++G K +SG G+LP +ID F+ +IG+ +
Sbjct: 347 RM-SGLFGTFFWFVPNILAQLLFSKIRKSLGGRLKFAISGAGALPEYIDRFFNSIGIPIL 405
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE+S RR +G++G I EIKI+D + E+ G KGI +G +
Sbjct: 406 EGYGMTETSGASTRRRLDRITVGTLGKCIPGVEIKILDEKGEEIHEPGVKGIAWHKGGHI 465
Query: 480 MQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
MQGY+ +P T + + +DGWLN+GD + W A G L GRAKDTIVL
Sbjct: 466 MQGYYLDPEKTAETM-KDGWLNSGDLLLWTAQ-----------GELKYAGRAKDTIVLLG 513
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
GEN+EP +E A +S LI Q +++G DQ+ A++VPD E
Sbjct: 514 GENLEPEPIEFALTQSELILQAMIVGHDQKTLSALLVPDWE 554
>gi|386853545|ref|YP_006202830.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365193579|gb|AEW68477.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 630
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 312/597 (52%), Gaps = 48/597 (8%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWAVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II K+ + + +++Y +
Sbjct: 96 IIFNSVLPSVVVLENLNLLNMFVQIQFTVKPIFIIIENLNKEDRLK---YSDFEIYTYGD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK + A K + S+D+AT +YTSGTTGNPKGVML+H N L+Q+
Sbjct: 153 CISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGNPKGVMLSHANFLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY------EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F RI GF L
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLYPDNGFNLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ + LI L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGITGGGSMPLS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 377 VARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATCRIIGTDSFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR KDTIVL+ GENVEP +E S LI + +V+GQDQ+ GA+I+P+ EE+ +
Sbjct: 486 IGREKDTIVLNNGENVEPAPIEIKLEESILIEKAIVVGQDQKFLGALILPNFEEINKYLE 545
Query: 587 RLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
+ DA+ +S + + E++K ++ + QI ++++PF V
Sbjct: 546 SVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|398334435|ref|ZP_10519140.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 628
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 285/559 (50%), Gaps = 24/559 (4%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 10 DHTAQYYKPDGKNYQANSF--KNLYETVQQIGSGLISLGLEPGTPIGLIADSGARWLWCS 67
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G ++V RG+ S+ E+L +I NH+E +EN ++ ++ I+L
Sbjct: 68 MGITNIGCVDVPRGTDSTGEDLRYILNHAECSIAFLENEVALKKVLAQKSEFPHLKKIVL 127
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E F + DL ++ + H + I +D+AT VY
Sbjct: 128 FDQKGT------LENTEPFEIILLNDLIQKGKAWIQSKGKDEFHKRGSAIREEDLATIVY 181
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRS--LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 270
TSGTTG PKGVML+H+N++ + S L D + D+ ++ LPPWH+ ER
Sbjct: 182 TSGTTGKPKGVMLSHRNIVFNVDSALLGDDLNVYPTDRSMAYLPPWHIAERLVETICVRA 241
Query: 271 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
G +T++ L DL +P ++SVP V+E+LY+ I ++ +S ++ + A I+
Sbjct: 242 GGAEAFTSISTLSQDLSDIKPTLLLSVPRVWESLYNKIHDKVRGASPVQQALFGAFKEIA 301
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
Y +K I L + + S +L + I +LW + +A+ L + KI+ +
Sbjct: 302 ITY--YKHISRLQGLEYSLTEESTFASLWQKFISLWIVILLWIPNQIAQ-LAFNKIKQGL 358
Query: 391 GIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G + +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G I
Sbjct: 359 GGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGRCIP 418
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
+IK++D + E+ G KGI +G VM+GY+K P TK+ L DGWLN+GD+
Sbjct: 419 GVQIKLMDEKGKEITKPGVKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDL---- 474
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
+ G L GRAKDTIVL GEN+EP +E A +RS I Q +V+G DQ+
Sbjct: 475 ------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSQFIHQAMVVGHDQKT 528
Query: 570 PGAIIVPDKEEVLMAAKRL 588
GA+IVP++E + K L
Sbjct: 529 LGALIVPNEEALEKYLKEL 547
>gi|386859368|ref|YP_006272074.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934249|gb|AFI30922.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 629
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 291/545 (53%), Gaps = 27/545 (4%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
+I + N + + L++ +L FA LR I + ++K+ + S+N W V D +L+ G
Sbjct: 20 QIYKNNKDYFKVTYADLKENVLKFASFLRKINLGYQDKVFICSENRIEWSVIDFAILSLG 79
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
A++V +G + E I N+ + VEN + + I + +I +K
Sbjct: 80 AVDVPKGIDITLFEAEIIINNIVPNVIIVENVDLLDLIIKLKFQVKPTVIVIDDLYEKDK 139
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ E V++Y E I +G +R+ D I +D+AT +YTSGTTGN
Sbjct: 140 LR---FSEFEVYTYKECILIGENARQ------DEEIIETVNNISLNDMATIIYTSGTTGN 190
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
PKGVML+H N L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ +
Sbjct: 191 PKGVMLSHANFLYQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNI 250
Query: 280 --RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
RN+ DD++ PHY+ +VP L+ I++ I + + R L RI +
Sbjct: 251 VPRNMLDDIRNINPHYIAAVP----RLWIAIKQNIVKEVSKKNFFVRLLFRIFVKFACIN 306
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
I L L+ + + + +L+PL++L +V+KKI+ +G + G
Sbjct: 307 DICRRIILGLYPDNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVG 366
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
+SGGGS+P+++ F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I
Sbjct: 367 ISGGGSIPLYVVRFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIR 426
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
D E L KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ +
Sbjct: 427 D-ENGVKLKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN---- 481
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
V+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P
Sbjct: 482 ------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILP 535
Query: 577 DKEEV 581
+ EE+
Sbjct: 536 NFEEI 540
>gi|203284063|ref|YP_002221803.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083506|gb|ACH93097.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 629
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 291/545 (53%), Gaps = 27/545 (4%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
+I + N + + L++ +L FA LR I + ++K+ + S+N W V D +L+ G
Sbjct: 20 QIYKNNKDYFKVTYADLKENVLKFASFLRKINLGYQDKVFICSENRIEWSVIDFAILSLG 79
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
A++V +G + E I N+ + VEN + + I + +I +K
Sbjct: 80 AVDVPKGIDITLFEAEIIINNIVPNVIIVENVDLLDLIIKLKFQIKPTVIVIDDLYEKDK 139
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ E V++Y E I +G +R+ D I +D+AT +YTSGTTGN
Sbjct: 140 LR---FSEFEVYTYKECILIGENARQ------DEEIIETVNNISLNDMATIIYTSGTTGN 190
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
PKGVML+H N L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ +
Sbjct: 191 PKGVMLSHANFLYQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNI 250
Query: 280 --RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
RN+ DD++ PHY+ +VP L+ I++ I + + R L RI +
Sbjct: 251 VPRNMLDDIRNINPHYIAAVP----RLWIAIKQNIVKEISKKNFFVRLLFRIFVKFACIN 306
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
I L L+ + + + +L+PL++L +V+KKI+ +G + G
Sbjct: 307 DICRRIILGLYPDNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVG 366
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
+SGGGS+P+++ F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I
Sbjct: 367 ISGGGSIPLYVVRFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIR 426
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
D E L KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ +
Sbjct: 427 D-ENGVKLKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN---- 481
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
V+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P
Sbjct: 482 ------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILP 535
Query: 577 DKEEV 581
+ EE+
Sbjct: 536 NFEEI 540
>gi|291288156|ref|YP_003504972.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
gi|290885316|gb|ADD69016.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
Length = 627
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 291/563 (51%), Gaps = 27/563 (4%)
Query: 20 HRHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLS 79
+R F VF C I R + KL +++ + + G+K K+
Sbjct: 5 NRTVFSVFLDACKKYSTNIAYIYRVGEKELEVTYQKLLEDVFILSRTFKKHGIKRGTKVL 64
Query: 80 LFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAE 139
SDN W+V D + + GAI + RGS + +E +I HS S A+ E A
Sbjct: 65 FISDNRYAWIVTDLAIASLGAILIPRGSDTPLDETRYIAEHSGS-KYAIFETETALETAN 123
Query: 140 TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY 199
+ + I L+ G + V +Y+EI+ + ++++ + K
Sbjct: 124 PVIDDLKFKEIFLVEGDGTKRLFS-----KVHTYNEIM-----GDRKYTET-ELDNFMKA 172
Query: 200 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 259
+ G DDI T +YTSGTTG PKGVMLT++N++H + + D++ ++ D +LS+LP WH++
Sbjct: 173 DVGGIDDIFTIIYTSGTTGYPKGVMLTNRNIMHNLDIIPDLIALKDDDIWLSILPAWHIF 232
Query: 260 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 319
E + G L+Y+ V+ DL+ Y+P + +VP V+E LYS + + +
Sbjct: 233 EHTVELVAMANGCRLVYSGVKTFSADLEHYKPTIVATVPRVWEALYSKVIATLDKQGGRK 292
Query: 320 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 379
+ L R S +Y R +G L +KQ + + I A + A L PL ++A
Sbjct: 293 LSLFLMLCRASASYNRQLRRLKGH-LPEFRKQ-NIFIKFIKNTGAALKLAALTPLKIIAM 350
Query: 380 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
K +K +Q G + VSGGGSLP +++ + +AIG+++ YG+TE +P IA R C
Sbjct: 351 K-KFKAVQDKFGGRLRLAVSGGGSLPAYLESWLDAIGLRIVNAYGMTECAPAIAGRALNC 409
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
+V G++G + TEI+IV+ E ++LPAG +G ++++G QV GY++ P + A +DG
Sbjct: 410 DVFGTLGPAVPGTEIRIVN-EDGDILPAGEEGEIQIQGPQVFPGYYELPEENEHAFTDDG 468
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
+ TGD+G + G L + GR KD IVL+ GEN++P +E A ++
Sbjct: 469 FFRTGDLGMLT----------LTGELKITGRMKDIIVLANGENIDPTRIESAITMLPFVK 518
Query: 559 QIVVIGQDQRRPGAIIVPDKEEV 581
V++GQDQ+ A+I+PD E++
Sbjct: 519 DAVLVGQDQKSLAALIIPDFEKM 541
>gi|410678889|ref|YP_006931291.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536277|gb|AFU74408.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 630
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 289/535 (54%), Gaps = 39/535 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDLAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN + + + II K+ + + +++Y +
Sbjct: 96 IIFNSILPGVVILENLNLLDMFVRIQFTVKPIFIIIENLNKEDKLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK N A K + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRKDSEIINIASK------VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIRNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F Y A +Y GF L
Sbjct: 267 IAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLYPDNGFSLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ L IC L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PMKKILGTFGL--------IC--LFPFKALGNILIFNKINKILGNNFVVGITGGGSMPVS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 377 VVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDVDGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 486 IGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|216263809|ref|ZP_03435803.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
gi|215979853|gb|EEC20675.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
Length = 630
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 289/535 (54%), Gaps = 39/535 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDLAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN + + + II K+ + + +++Y +
Sbjct: 96 IIFNSILPGVVILENLNLLDMFVRIQFTVKPIFIIIENLNKEDKLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK N A K + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRKDSEIINIASK------VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIRNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F Y A +Y GF L
Sbjct: 267 IAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLYPDNGFSLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ L IC L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PIKKILGTFGL--------IC--LFPFKALGNILIFNKINKILGNNFVVGITGGGSMPVS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 377 VVRFFNSIGIELANAYGLTETSPGVASNKHKRVIIGTCGKILPGTVAEIRDVDGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 486 IGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|343127459|ref|YP_004777390.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222147|gb|AEL18325.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 630
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 183/597 (30%), Positives = 317/597 (53%), Gaps = 48/597 (8%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ G +++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGVVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN + + + + II ++ + + E +++Y++
Sbjct: 96 IIFNSVLPSVVILENLNLLDMFVQIKFTAKPIFIIIENLSQEDRLKYNDFE---IYTYND 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I LG RK A K + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILLGDNLRKNSEIIEIANK------VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGFCLTR 347
+ +VP ++ + I K++ R++ ++ +F Y +Y GF L
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKSAFLSDICYRVVMGLYPDNGFSLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ ++ L IC L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PIKKILGILGL--------IC--LFPFKALGNILIFNKINKILGNNFVVGITGGGSMPLS 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 377 AARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDKEATCRIIGPDGFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ +
Sbjct: 486 IGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLE 545
Query: 587 RLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
+ DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 546 SVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKTNGFKPFEQILKFTLLEKPFEV 602
>gi|111114960|ref|YP_709578.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384206637|ref|YP_005592358.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890234|gb|ABH01402.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856520|gb|AEL69368.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 630
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 289/535 (54%), Gaps = 39/535 (7%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDLAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN + + + II K+ + + +++Y +
Sbjct: 96 IIFNSILPGVVILENLNLLDMFVRIQFTVKPIFIIIENLNKEDKLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK N A K + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRKDSEIINIASK------VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIRNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY--EGFCLTR 347
+ +VP ++ + I K++ R++ I+++F Y A +Y GF L
Sbjct: 267 IAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLYPDNGFSLFF 326
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
K+ L IC L+P L L++ KI +G + G++GGGS+P+
Sbjct: 327 PIKKILGTFGL--------IC--LFPFKALGNILIFNKINKILGNNFVVGITGGGSMPVP 376
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 377 VVRFFNSIGIELANAYGLTETSPGVASNKHKRVIIGTCGKILPGTVAEIRDVDGNKLKKP 436
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN----------VVQI 485
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 486 IGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|183220510|ref|YP_001838506.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910619|ref|YP_001962174.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775295|gb|ABZ93596.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778932|gb|ABZ97230.1| Long-chain acyl-CoA synthetase, AMP-forming (Acyl-CoA synthetase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 639
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 308/577 (53%), Gaps = 35/577 (6%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
G +GV+ +++ F D S WL D +L GA+ V RG+ EE+L+I NHSE+
Sbjct: 58 GFIELGVEVGDRIGFFCDASVNWLRTDLSILTAGAVVVPRGTDIVREEILYILNHSEAKY 117
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
L V+ P+ RI + L ++ I +L ++ + + D I+ L +
Sbjct: 118 LVVQKPKDKKRIEDLLGELPHLKQIFVLENEQGEL---------ISGPDSILFLVERGKS 168
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 245
S + + I D +AT +YTSGTTGNPKGVML+ K + I++ + +
Sbjct: 169 IGKSSGLLNLTNRIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNS 228
Query: 246 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY 305
D +S+LPPWH +ERA Y G++ + + + +LKDDL+ ++P SVP ++E++Y
Sbjct: 229 NDNAVSLLPPWHAFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVY 288
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
+GI ++ + + +++ + F ++ GF ++P++LV++ +A
Sbjct: 289 NGIMAKVAKEGGFKEKLFHFFLKVGATWARFFAMFMGFEF--EIQKPNFLVSICKRTYAL 346
Query: 366 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
+I +L PL LL+ K ++ I A+G + +S G +LP +D F AIG+KV GYG+
Sbjct: 347 VILILLSPLKLLSIK-IFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYGM 405
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA-GSKGIVKVRGSQVMQGY 483
TE+S V++ R T G+VG PI+ I++ D ET +VL G KG + ++ Q+++GY
Sbjct: 406 TETSAVVSIRSNTKPTKGTVGIPIDGYSIRLKD-ETGKVLTKIGEKGTLWIKSKQILKGY 464
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P + D DG+ +TGD+ I+ + LV GR+KDTI L GENVE
Sbjct: 465 YKRPELNQVVFDADGFFDTGDLMMISHRNE----------LVFAGRSKDTIALIGGENVE 514
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 603
P+ +E+ L S I Q++V+G D++ A+IVP+ E V +K I+ A E +
Sbjct: 515 PIPIEDKLLTSPYIDQVMVVGHDKKTLAALIVPNFEAV--ESKIQGILKEKAIEWNTNPK 572
Query: 604 ISLLY-GELRKWTSK----CSFQIGP---IHVVDEPF 632
+ L+ E+ K S+ SF++ P +VV PF
Sbjct: 573 VRELFRSEISKIISRDNGFKSFEMIPANNFYVVPRPF 609
>gi|359689681|ref|ZP_09259682.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749980|ref|ZP_13306268.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418759027|ref|ZP_13315207.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113518|gb|EID99782.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274865|gb|EJZ42183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 283/518 (54%), Gaps = 50/518 (9%)
Query: 79 SLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIA 138
++ +DN W++AD ++ G +V RG+ + +L HI HS + + EN ++
Sbjct: 61 AILADNRLEWIIADYAIVMAGGADVPRGTDVTDSDLNHILPHSGATIVFAENDSVLKKLY 120
Query: 139 ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYK 198
+ + + IIL+ ++ + +++ G+E R + + +
Sbjct: 121 QNQSAIQNVHTIILIDRNAKGTGKEL-------RFWDLVQRGKELR----EKGNREMENR 169
Query: 199 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 258
I +D+ T +YT+GTTG PKGV LTHKN++ QI + + A G++ LS+LP WH
Sbjct: 170 ISQIQEEDLFTLIYTAGTTGRPKGVPLTHKNIMSQINRIPIKLAA--GERILSILPVWHS 227
Query: 259 YER----ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 314
+ER C YF G Y++VR LK+DL++ +P +M S P ++E++Y GI +
Sbjct: 228 FERMFEMVCIYF----GAGTYYSSVRTLKEDLKKVKPTFMASAPRLWESVYQGIYATVAK 283
Query: 315 SSAARRVVARALIRISFAYTAFKRIYEGF---CLTRNQKQPSYLVALIDWLWARIICAIL 371
SS+ ++ + A + S + KR + GF LT S V + L + I I+
Sbjct: 284 SSSVKQSLFHAALFFSSNIESAKR-WLGFRELDLTGRSAIVSLFVGIFKVL--QYILNII 340
Query: 372 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 430
P LL + +V KKI+ A G K VSGGG+LP+H+D F+ AIG++V GYGLTE+SPV
Sbjct: 341 -PATLL-DLIVLKKIRQATGGRLKGTVSGGGALPIHVDKFFNAIGIQVLEGYGLTETSPV 398
Query: 431 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-------PAG--SKGIVKVRGSQVMQ 481
I+ R V+G+VG T +++VD T+++L P G KG + V+G QVM
Sbjct: 399 ISVRILNEAVMGTVGPLYKGTSLRVVDPNTSKILWTTEEGGPKGYAVKGEIHVKGDQVMS 458
Query: 482 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 541
GY+ +P T++ ++ DGW NTGD+G + + C L + GR K+TIVL GEN
Sbjct: 459 GYYHDPENTRKVMN-DGWFNTGDLGMMTYND-------C---LKIVGRTKETIVLLGGEN 507
Query: 542 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
VEP+ +E +S I Q +VIGQDQ+ A+IVP+ E
Sbjct: 508 VEPVPIENILSQSEFILQCMVIGQDQKYLSALIVPNPE 545
>gi|374585933|ref|ZP_09659025.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373874794|gb|EHQ06788.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 638
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 315/625 (50%), Gaps = 56/625 (8%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A ++ S++ + F E E L ++ L +G K +++ + +D RWL
Sbjct: 21 DSPAQYVKSSKKEYSPFSFREFTAESRSL--SKALLTLGAKHGDRIGIIADVGPRWLRVS 78
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
+ + G ++V RGS ++++++ +I NH+E L VEN + + + S A +R IIL
Sbjct: 79 MAITSIGCVDVPRGSDATADDITYILNHAECTMLFVENEKVLAKFLPVIKSIATIREIIL 138
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
G +S ++ V + +E+I A DS + + E + DD+AT +Y
Sbjct: 139 FSGNAAS------GDLKVRTIEELI-----QSVATDDSLEKEYARRGEAVKPDDLATIIY 187
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTH ++L ++ +L+ V GD + LPPWH ER
Sbjct: 188 TSGTTGVPKGVMLTHGSMLWEVATLHKEFVKTGVTVGRGDITMGFLPPWHSGERMFETIC 247
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
F G + +T V L DL+ +P ++ +VP V+E Y I Q+ S+A R + + +
Sbjct: 248 FYSGAAVAFTTVAELARDLKAIRPTFLFTVPRVWENFYGKILDQLKGSAAFSRFLFQLFV 307
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSY--LVALIDWLWARIICAILWPLHLLAEKLVYKK 385
+ + ++ R L R + + L L+ A +I L P+ L+A +L +K
Sbjct: 308 KTACSF----RAALDTVLDRQVRLTASRSLSELVKIPVAALIVLALLPVALIA-RLFLRK 362
Query: 386 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 444
I + +G + +G G+L +D F+ +IG+ + YG+TE+S V R V G+V
Sbjct: 363 ILAVLGGRVRFAFAGAGALQPEVDRFFHSIGLPLLEVYGMTENSGVSTIRHLNRFVTGTV 422
Query: 445 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 504
G P+ EI++V+ + G KG+ RG M+GY++ P T +D +GWLN+GD
Sbjct: 423 GRPLTGVEIRLVNDRKETITEPGIKGVALHRGPHNMKGYYREPEKTAAIIDAEGWLNSGD 482
Query: 505 -IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 563
+ W A G L GRAKDTIVLS GENVEP +E + +S +VV+
Sbjct: 483 LLMWTAQ-----------GDLKFAGRAKDTIVLSGGENVEPEPIENSLKQSEYFTHVVVV 531
Query: 564 GQDQRRPGAIIVPDKEEVL--------MAAKRLSIVHADASELSKEKTISLLYGELRKWT 615
GQD++ GA+IVP +E++L +RL + E++K L+ E++K+
Sbjct: 532 GQDRKTLGALIVPKREKLLPLLNGSAPSDPERLEEALNQSEEIAK-----LVREEIKKYV 586
Query: 616 S-----KCSFQIGPIHVVDEPFTVN 635
S K ++ H++ FTVN
Sbjct: 587 SQETGYKAFERVTTFHILGGDFTVN 611
>gi|221217462|ref|ZP_03588933.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224533985|ref|ZP_03674569.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225549859|ref|ZP_03770821.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|221192740|gb|EEE18956.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224512821|gb|EEF83188.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225369550|gb|EEG99001.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
Length = 630
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFVQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|387827058|ref|YP_005806340.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149486|gb|ADQ29557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 630
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDTLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDTDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|224532780|ref|ZP_03673396.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512268|gb|EEF82653.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 617
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 168/529 (31%), Positives = 287/529 (54%), Gaps = 27/529 (5%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDTLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDTDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|225551923|ref|ZP_03772863.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225370921|gb|EEH00351.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 630
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRSEWTVIDFAILSLGAVDIPKGSDVTLLEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNILIFNKINKILGNNFVVGITGGGSMPLSAFRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTLAEIRDTDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|226320671|ref|ZP_03796229.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233887|gb|EEH32610.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 630
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFVQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDALRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|397689178|ref|YP_006526432.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
gi|395810670|gb|AFN73419.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
Length = 607
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 295/575 (51%), Gaps = 62/575 (10%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
GL +GVK ++K+++ S+N W+ AD +L GAI+V S+S+ + I N+SE+V
Sbjct: 56 GLASMGVKKDDKVAIISENRPEWVYADMAILGLGAIDVPLYPISTSDSIEFILNNSEAVG 115
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
+ V N N+I + ++F+I++ + S PD V+S+++I+++G+E RK
Sbjct: 116 IFVSNKFHLNKILKIKDKCKHLKFVIVMNNAEKS--PDK----GVYSFEDILNMGKEFRK 169
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 245
N K E + + + T +YTSGTTG PKGVMLTHKN++ I++ ++I +
Sbjct: 170 ----ENPGYFKDKSELVEENQLCTIIYTSGTTGEPKGVMLTHKNIVSNIKAAHEIFDIDE 225
Query: 246 GDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 303
D FLS LP H++ER GY+ FS G + Y ++ + ++ +P M +VP ++E
Sbjct: 226 TDTFLSFLPLCHIFERMAGYYTAFSCGGTIAYAESIEKIASNMLEIRPTIMTAVPRLFER 285
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+Y+ I++ I + S ++ + I Y L R QP
Sbjct: 286 MYTKIKRNIESQSEKKQKIFNWAIETGKEYQ----------LARKSGQP----------- 324
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGY 422
I L H LA+KLV K++ G + +SGG +L + +F+EA G+ + GY
Sbjct: 325 ---IPVSLTLKHKLADKLVLSKLRERTGGRMRFFISGGAALARELGIFFEAAGILIIEGY 381
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTESSPVIAA R G+VG P+ E+KI A+ E+L G +MQG
Sbjct: 382 GLTESSPVIAANRLNDYKFGTVGKPMPGVEVKI--AKDGEIL---------AHGPNIMQG 430
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+KN T++ + +DGWL+TGDIG G L++ R K S G+ V
Sbjct: 431 YYKNKKETEETI-KDGWLHTGDIGVFDAE----------GFLIITDRKKHLFKTSQGKYV 479
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E L S I Q V+IG + A+IVPD E + A I + D EL K K
Sbjct: 480 APTPIESMFLASKYIEQFVIIGDRRMFITALIVPDFEALKEYADANRIQYKDEKELVKMK 539
Query: 603 TI-SLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
I LL EL ++ K S ++ ++D+PFT+
Sbjct: 540 QIYELLDKELEQFQKKLSSFEKVRKFTLLDKPFTI 574
>gi|387825795|ref|YP_005805248.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|312147986|gb|ADQ30645.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 630
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGSVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|225549259|ref|ZP_03770232.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|225370117|gb|EEG99557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 630
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVFPSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|15594482|ref|NP_212271.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941874|ref|ZP_03087256.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942358|ref|ZP_03087740.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942377|ref|ZP_03087759.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942400|ref|ZP_03087782.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|218249890|ref|YP_002374665.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223889090|ref|ZP_03623679.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226321952|ref|ZP_03797477.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|2688028|gb|AAC66529.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|218165078|gb|ACK75139.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223885339|gb|EEF56440.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226232542|gb|EEH31296.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 630
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDTLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|332297617|ref|YP_004439539.1| 4-coumarate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332180720|gb|AEE16408.1| Long-chain-fatty-acid--CoA ligase., 4-coumarate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 653
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 284/549 (51%), Gaps = 29/549 (5%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F +F ++ +++++FA L+ G+ + ++L SDN W + D +L+ GA +V RG
Sbjct: 42 FELFSYKQVYEKVIEFAHALKEFGIVRGDAVALISDNRREWFITDMALLSLGAADVPRGC 101
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
S E+ I +++E E ++ E + IL + A E
Sbjct: 102 DSMGSEIRFIISYAECRTGFFETERQLCKVLEKREEVPLLENAILFEPVSAETAVRAQES 161
Query: 168 -IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
I VFS+ E+ G + SD+ + + D+IAT ++TSGTTG PKGVMLT
Sbjct: 162 GIRVFSFAELEAKGARA----SDAERTAIEAEMDKTSPDEIATIIFTSGTTGVPKGVMLT 217
Query: 227 HKNLLHQIRSLYDIVP-AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLK 283
H N + Q+ + ++ E+GD +LS+LP WH +ER Y + L Y+ +
Sbjct: 218 HDNFIAQVEVVKSVLTNTEDGDLWLSVLPVWHSFERVFQYLVMGLNSGLAYSKPVAAVML 277
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
D+ +P M VP ++E+L G+ + + + + I + ++ + G
Sbjct: 278 ADMATLRPQAMCGVPRLWESLAQGVFRTMRKTGGVPYKLFLFFISVGKKFSWAREHVRGL 337
Query: 344 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 402
+++ ++D L + +L PL+ L LVY+KI++ +G + +SGGG+
Sbjct: 338 VCRLHRRS-----RILDALVGILPLILLSPLYALGNLLVYRKIRAKLGGRMECAISGGGA 392
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE--- 459
L D FY AIG K+ GYG+TE++PV++ R P+ G VG +IK+V E
Sbjct: 393 LQSETDAFYRAIGFKLLEGYGITEAAPVLSVRWPSKPRSGCVGQVYPCAQIKVVAEEHGR 452
Query: 460 --TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
+ E LP G G+V RG Q+M+GY+K P T+Q +D+DGWLNTGD+G ++ +
Sbjct: 453 IVSGEPLPPGKSGLVLARGRQIMKGYYKRPDLTEQVVDKDGWLNTGDLGVLSYDNE---- 508
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
+ + GRAKDTIVL GEN+EPL +E A S I V+ GQD++ GA+IVP
Sbjct: 509 ------IKITGRAKDTIVLLGGENIEPLVIESALCGSPYIESAVIQGQDKKYLGALIVPV 562
Query: 578 KEEVLMAAK 586
KE +L A+
Sbjct: 563 KEAILTFAQ 571
>gi|216264699|ref|ZP_03436691.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215981172|gb|EEC21979.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 630
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/591 (29%), Positives = 312/591 (52%), Gaps = 36/591 (6%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ ++ A L+ I VK ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVIKLASFLKSINVKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN N + + + II ++ + + +++Y +
Sbjct: 96 IIFNSVLPSVVILENLNLLNMFIQIKFTVKPIFIIIENLNQEDRLK---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + DD++ PHY
Sbjct: 207 SFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++ +F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I ++ +ICA +P L L++ KI +G + G++GGGS+P+ F+
Sbjct: 326 FPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSMPLSAVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
TIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+ + +
Sbjct: 492 TIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKI 551
Query: 593 ADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 634
DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 552 FDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|398335017|ref|ZP_10519722.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 631
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 284/529 (53%), Gaps = 31/529 (5%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L++++ + GL G+ E+K+ D+S W +AD ++++GA+ V RG+ ++
Sbjct: 39 SRLKEQVDEMTAGLIAEGITKEDKILYLCDSSVNWFLADLAIISSGAVCVPRGTDVVDDD 98
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSK-AAMRFIILLWGKKSSV--APDIVEEIPV 170
+L+I NHSES V+ + R+ TL SK +++ I +L + P+
Sbjct: 99 ILYIVNHSESRYAVVQKEKDKQRLL-TLASKIPSIKTIFVLEDDSGELKSGPE------- 150
Query: 171 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
S +I GRE K ++ R + K D++AT +YTSGTTG PKGVML
Sbjct: 151 -SVSSLIQSGREYLKKNPNAIRTRLNEK----SPDELATLIYTSGTTGAPKGVMLNQSGW 205
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
+ + + V + D +S+LPPWH +ERA Y + G+ + + + +L+DDL+ ++
Sbjct: 206 ISAVEKVIRFVGLTSKDSGVSLLPPWHAFERAIEYCTVALGVTFLISNITSLRDDLKEFR 265
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P SVP ++E+LY+GI ++ SA +R + +++ ++ K I G+ +
Sbjct: 266 PTLFPSVPRIWESLYNGIMTKVSKESALKRNLFHFFLKVGMIWSHNKSILFGYDF--QLE 323
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P +L L A I +L+PL L A +++ + A+G + VS G +LP +D
Sbjct: 324 KPFFLSQLFKRTIALIKLVLLFPLKLGAIG-IFQSVHKALGGRLRVSVSAGSALPSVVDK 382
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS- 468
F AIG+ V GYG+TE+S V + R P G+VG P++ E ++ D VL S
Sbjct: 383 FLSAIGLIVLEGYGMTETSAVTSIRDPHRPSSGTVGIPVDGYEYRLKDERGGFVLNGHSQ 442
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
KG + ++ Q++ GY+K P + D++G+ +TGDI I + RG L G
Sbjct: 443 KGTLWLKSKQILMGYYKRPELNEVVFDKEGFFDTGDIMRI---NYRGE-------LSFAG 492
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
RAKDTIVL+ GENVEP+ +E+ L S I Q++V G + + +IVPD
Sbjct: 493 RAKDTIVLAGGENVEPVPIEDQLLNSPYINQVMVTGHESKHLVVLIVPD 541
>gi|398343925|ref|ZP_10528628.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 630
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 273/518 (52%), Gaps = 27/518 (5%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
GL V ++K+ D S W++ D +++ GAI+V RG+ E++L+I NHSES
Sbjct: 51 GLIQAEVAKDDKILYLCDASSNWILGDIAIISAGAISVPRGTDVVDEDILYIVNHSESKY 110
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE-EIPVFSYDEIIDLGRESR 184
V+ + RI +++ + +L DI E +I + S E+I+ G+
Sbjct: 111 ALVQKEKDKQRILNLASKLPSLKKVYVL-------EDDIGELKIGIGSVGELIETGK--- 160
Query: 185 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
S + D K E D++AT +YTSGTTG PKGVMLT + + + V
Sbjct: 161 TYLSQNPDCIKKRLMEK-SPDELATLIYTSGTTGAPKGVMLTQTGWISAVEKVIGFVGLT 219
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
+ D +S+LPPWH +ERA Y I G E + + + NLK+DL+ ++P SVP ++E+L
Sbjct: 220 SSDSGISLLPPWHAFERAIEYCIVELGAEFLVSNINNLKEDLKEFKPTLFPSVPRIWESL 279
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
Y+GI ++ S +RV+ +++ ++ K I G+ + P ++ L+ L A
Sbjct: 280 YNGIMNKVAKESPIKRVLFDFFLKVGMSWAEKKSILFGYDFRIMRPDP--MLRLLQKLSA 337
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
L PL L A L+++ + A+G + VS G +LP +D F IG+ V GYG
Sbjct: 338 FFGLIFLSPLKLGA-ILIFRGVHQALGGRLRVSVSAGSALPSVVDKFLSGIGLIVLEGYG 396
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE+S V++ R+ G+VG PI E I D ET + G KG + ++ QV+ GY
Sbjct: 397 MTETSAVLSIRKANRPSPGTVGTPIAGYECIIKD-ETGNPVAQGKKGSLWIKSKQVLIGY 455
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P D++G+ +TGDI + LV GRAKDTIVL+ GENVE
Sbjct: 456 YKRPELNAVVFDKNGFFDTGDIMRFNYRNE----------LVFTGRAKDTIVLAGGENVE 505
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
P+ +E+ L S I Q++V G + + A+IVPD E++
Sbjct: 506 PVPVEDQLLNSPYINQVMVTGHEAKHLVALIVPDFEKL 543
>gi|456973085|gb|EMG13345.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 568
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 194/560 (34%), Positives = 280/560 (50%), Gaps = 81/560 (14%)
Query: 132 EFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSN 191
E +N++ SK I++ K SS + +I YD +++ GR R S
Sbjct: 3 EKYNKVK----SKVPKVETIIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKA 53
Query: 192 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKF 249
+ R E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ E D
Sbjct: 54 EKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSM 109
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I
Sbjct: 110 LSILPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIY 169
Query: 310 KQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--------------- 351
++ + RRV+ + S Y A +R G + +
Sbjct: 170 NKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVL 229
Query: 352 -------------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
P Y + L +WL+ ++ L + +V KI++A G
Sbjct: 230 LLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGG 289
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +
Sbjct: 290 RLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKS 349
Query: 452 EIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 500
E+ I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+
Sbjct: 350 ELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWM 408
Query: 501 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 560
NTGDIG+I L L GRAKDT+VL GENVEP+ +E S I+Q
Sbjct: 409 NTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQS 458
Query: 561 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KC 618
+VIGQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K
Sbjct: 459 MVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKT 518
Query: 619 SF----QIGPIHVVDEPFTV 634
F Q+ + + +PF V
Sbjct: 519 GFKSFEQVQHVILAKKPFEV 538
>gi|374586246|ref|ZP_09659338.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875107|gb|EHQ07101.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 643
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 298/540 (55%), Gaps = 37/540 (6%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
++ F + ++L+ G G+K +++ L D S W V D +L+ GA++V
Sbjct: 36 DNSFHSYTYTELKTMTDQLIAGWVSSGLKSGDRVLLLCDPSSYWFVTDTSILSVGAVSVP 95
Query: 105 RGSRSSSEELLHIYNHSES---VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV- 160
R + + +++L+I NHSE+ V V+ E R+A+ L + ++ II++ ++
Sbjct: 96 RATDVTDDDILYIANHSEASLAVVQTVKTAEKLRRLADKLPT---IKRIIVMEDANFNLL 152
Query: 161 -APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
PD + + + G ++ A D+N ++ + +AT +YTSGTTG
Sbjct: 153 EGPDTLASV--------MQAGVKALAA--DANLVQR--TLAGVDGSALATLIYTSGTTGA 200
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
PKGVML+ K + + + + GD+ LS+LPPWH +ER Y + G+ M + +
Sbjct: 201 PKGVMLSQKGWITAVLNTLPRTGFQKGDRALSLLPPWHAFERGVEYAVVYLGLAFMVSDI 260
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
L+DDL+ ++P SVP ++E++Y+GI ++ SA ++ V A + I +Y +K
Sbjct: 261 SCLRDDLKWHRPTIFPSVPRIWESVYNGILAKVKKESALKQAVFNAGLSIGASYNRWKAR 320
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 398
G+ L ++P+ +V++I+ L A + ++ PL L+ L+++ I+ A+G K VS
Sbjct: 321 AFGYRL--QIERPATIVSMIERLAAWCVLLVMGPLRGLS-LLIFRPIRQALGGQIKFSVS 377
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GG +LP +D F AIG+ V GYG+TE+S VI+ R G+VG PI I++ +
Sbjct: 378 GGSALPGVVDRFLSAIGLTVLEGYGMTETSAVISIRNRNRPTPGTVGTPIGGYTIRLKNE 437
Query: 459 ETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
+ ++V +P G+KG + V+ Q++ GY++ P + D++G+ +TGD+ + H
Sbjct: 438 QGHDVSHIP-GAKGTLWVKSDQILTGYYRRPELNEVVFDKEGFFDTGDL-MLLTHR---- 491
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
G L+ GR+KDTI L+ GEN+EP+ +E+ L S I Q++V+G +++ GA+IVP
Sbjct: 492 -----GELMFAGRSKDTIALAGGENIEPVPIEDYLLESEFIDQVMVVGDERKTLGALIVP 546
>gi|359689012|ref|ZP_09259013.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748800|ref|ZP_13305092.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418756178|ref|ZP_13312366.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115849|gb|EIE02106.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275869|gb|EJZ43183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 630
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 180/547 (32%), Positives = 286/547 (52%), Gaps = 35/547 (6%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
R ++ + R F E K + L GL GV+ ++K+ D+S W++ D +++ G
Sbjct: 27 RRTKDGIKGRTFSEIKSLTDSL--IAGLIEEGVQKDDKILYLCDSSQNWIIGDIAIISVG 84
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
A++V RG+ E++L+I NHSES V+ + R+ ++ KK
Sbjct: 85 AVSVPRGTDVVDEDILYIVNHSESKYAIVQKEKDKQRLINLGPKLPSL--------KKVF 136
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFS-DSNDARKHYKYETIGSDDIATYVYTSGTTG 218
V D + ++ D I L + + S D RK + ++ +++AT +YTSGTTG
Sbjct: 137 VIEDDIGDLKS-GADTIQSLIEKGKSNLSKDPGIVRKRLREKS--PNELATLIYTSGTTG 193
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
PKGVMLT + + + V + D +S+LPPWH +ERA Y I G + +
Sbjct: 194 APKGVMLTQTGWISAVEKVIGFVQLTSADSGVSLLPPWHAFERAIEYCILELGAGFLVSN 253
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
+ NLK+DL+ +QP SVP ++E+LY+GI ++ S+ +R V ++I + K
Sbjct: 254 ISNLKEDLKEFQPTLFPSVPRIWESLYNGIMNKVSKESSLKRAVFNFCLKIGNLWAVQKG 313
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLW---ARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 394
+ G+ K+P+++V W + + ++ L L LV+K I SA+G +
Sbjct: 314 VLFGYDF--RIKKPNFIV----WTFSKLSSLVLLTLLSPLKLLALLVFKPIHSALGGKLR 367
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
VS G +LP +D F +IG+ V GYG+TE+S V++ R+P G+VG PI E
Sbjct: 368 VSVSAGSALPSVVDKFLSSIGLIVLEGYGMTETSAVLSIRKPKQPSPGTVGTPIQGYECI 427
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+ D N ++P G KG + V+ QV+ GY+K P D++G+ +TGDI R
Sbjct: 428 LKDEHGN-IVPQGGKGSLWVKSKQVLMGYYKRPELNDVVFDKNGFFDTGDI-------MR 479
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
R G LV GRAKDTIVL+ GENVEP+ +E+ L S + Q++V G + + +I
Sbjct: 480 FNYR---GELVFAGRAKDTIVLAGGENVEPVPIEDQLLNSPYVNQVMVTGHEAKHLVVLI 536
Query: 575 VPDKEEV 581
VPD E +
Sbjct: 537 VPDFERL 543
>gi|398348947|ref|ZP_10533650.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 630
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 271/519 (52%), Gaps = 29/519 (5%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
GL V ++K+ D S W++ D +++ GA++V RG+ E++L+I NHSES
Sbjct: 51 GLIQAEVVKDDKILYLCDASSNWILGDIAIISAGAVSVPRGTDVVDEDILYIVNHSESKY 110
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF--SYDEIIDLGRES 183
V+ + RI L SK L KK V D + E+ S E+I+ G
Sbjct: 111 ALVQKEKDKQRIL-NLASK-------LPSLKKIYVLEDDIGELKTGNESVGELIEKG--- 159
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
K + N + + D++AT +YTSGTTG PKGVMLT + + + V
Sbjct: 160 -KIYLSQNPHCIKKRLKEKSPDELATLIYTSGTTGAPKGVMLTQTGWISAVEKVIGFVGL 218
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
+ D +S+LPPWH +ERA Y I G + + + NLK+DL+ ++P SVP ++E+
Sbjct: 219 TSSDSGISLLPPWHAFERAIEYCIIELGAAFLVSNINNLKEDLKEFKPTLFPSVPRIWES 278
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
LY+GI ++ S+ +R + +++ ++ K I G+ +P+ +V L+ L
Sbjct: 279 LYNGIMNKVARESSFKRALFDFFLKVGMSWAEKKSILFGYDF--RIMKPNSMVRLMQKLG 336
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 422
A L PL L A L+++ + A+G + VS G +LP +D F IG+ V GY
Sbjct: 337 AFFGLVSLLPLKLGA-ILIFRGVHQALGGRLRVSVSAGSALPSVVDKFLSGIGLIVLEGY 395
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE+S V++ R+ G+VG PI E I D N V G KG + ++ QV+ G
Sbjct: 396 GMTETSAVLSIRKANRPSPGTVGTPIAGYECIIKDEAGNPV-AQGKKGSLWIKSKQVLIG 454
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P D++G+ +TGDI R R LV GRAKDTIVL+ GENV
Sbjct: 455 YYKRPELNAVVFDKNGFFDTGDI-------MRFNYRNE---LVFTGRAKDTIVLAGGENV 504
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
EP+ +E+ L S I Q++V G + + A+IVPD E++
Sbjct: 505 EPVPVEDQLLNSPYINQVMVTGHEAKHLVALIVPDFEKL 543
>gi|224534428|ref|ZP_03675006.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224514530|gb|EEF84846.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 630
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 285/529 (53%), Gaps = 27/529 (5%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L+ +L A L+ I K ++K+ + S+N W V D +L+ GA+++ +GS + E
Sbjct: 36 LKNNVLRLASFLKSINAKHQDKIFICSENRAEWTVIDFAILSLGAVDIPKGSDVTLFEAE 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I+N + +EN + + + II K+ + + +++Y +
Sbjct: 96 IIFNSVLPSIVILENLTLLDMFVRIPFTVKPIFIIIENLNKEDRLR---YSDFEIYTYSD 152
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G RK D+ + S+D+AT +YTSGTTG+PKGVML+H NLL+Q+
Sbjct: 153 CILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVS 206
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHY 293
S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + +D++ PHY
Sbjct: 207 SFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLNDIKNINPHY 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+ +VP ++ + I K++ R++ ++++F R+ G N
Sbjct: 267 IAAVPRLWIAIRQNIYKEVSKKPFIFRIIFHFFVKLAFLSDICYRVVMGL-YPDNGFSLF 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ + I + +IC L+P L L++ KI +G + G++GGGS+ + + F+
Sbjct: 326 FPIKKILGTFG-LIC--LFPFKALGNILIFNKINKILGNNFVVGITGGGSMSLSVVRFFN 382
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
+IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++ G KGI+
Sbjct: 383 SIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKLEKPG-KGIL 441
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
V+G QVM GY+ + AT + + DG+LNTGDI ++ + V+ + GR KD
Sbjct: 442 FVKGPQVMLGYYNDREATCRIIGSDGFLNTGDIAKLSKDN----------VVQIIGREKD 491
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
TIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 492 TIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|418684399|ref|ZP_13245584.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740695|ref|ZP_13297072.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410741098|gb|EKQ85811.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752072|gb|EKR09048.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 553
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 267/530 (50%), Gaps = 82/530 (15%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
AE L +G+K E + + +DN W++ D + +GA NV RG+ + EL +I NHSE
Sbjct: 46 LAEALIELGLKAREHVGVLADNRLEWILTDYAVQFSGAANVPRGTDVTESELEYILNHSE 105
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + +EN + + + + II++ K SS + +I YD +I+ GR
Sbjct: 106 AKIVFIENDKMLEKYNKVKSKLPKVETIIIM-DKSSSAKGKHIHKI----YD-LIEEGRS 159
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----L 237
R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+ L
Sbjct: 160 LRAKGSKKAEKR----IEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLL 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISV 297
DI P D LS+LP WH++ER Y S GI+ YT V +L++DL + +P +M S
Sbjct: 216 TDIKPT---DSMLSILPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASA 272
Query: 298 PLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
P V+E +Y+ I ++ + RR++ + S Y A +R G L + + +
Sbjct: 273 PRVWENVYANIYNKVNDPKQTPTIRRILFKLAYFFSKHYNASRRFLNG--LEVDYENRNI 330
Query: 355 LVALIDWLWARIICAILWPLHLLA------------------------------------ 378
L +L+ + + II + P L A
Sbjct: 331 LKSLVIGIKSLIILLLTGPFTLSAISILAYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTL 390
Query: 379 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 437
+ +V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 391 DTIVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFV 450
Query: 438 CNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKN 486
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY+KN
Sbjct: 451 KPIIGSVGFLVPKSELIIKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKN 510
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
P TK+ + DGW+NTGDIG+I L L GRAKDT+VL
Sbjct: 511 PEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVL 549
>gi|417782916|ref|ZP_12430639.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418733600|ref|ZP_13290724.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|409953617|gb|EKO08113.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410773209|gb|EKR53240.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 624
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K I+ + + K ++K F +I IH+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHIHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|417760957|ref|ZP_12408971.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417773540|ref|ZP_12421417.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418667876|ref|ZP_13229281.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|409942951|gb|EKN88554.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|410576628|gb|EKQ39633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410756321|gb|EKR17946.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|455790425|gb|EMF42291.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 624
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K I+ + + K ++K F +I +H+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|417763927|ref|ZP_12411900.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400353759|gb|EJP05912.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|456821587|gb|EMF70093.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 624
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K ++ + + K ++K F +I IH+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHIHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|421123940|ref|ZP_15584210.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421134660|ref|ZP_15594793.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410021244|gb|EKO88036.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438427|gb|EKP87513.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 645
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 144 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 320 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 438 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 546
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K I+ + + K ++K F +I +H+
Sbjct: 547 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHI 606
Query: 628 VDEPF 632
+ + F
Sbjct: 607 LSKEF 611
>gi|418672585|ref|ZP_13233921.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410580273|gb|EKQ48098.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
Length = 645
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 144 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 320 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 438 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 546
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K I+ + + K ++K F +I +H+
Sbjct: 547 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHI 606
Query: 628 VDEPF 632
+ + F
Sbjct: 607 LSKEF 611
>gi|421121176|ref|ZP_15581475.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410346004|gb|EKO97048.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
Length = 624
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 289/576 (50%), Gaps = 31/576 (5%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G+ L DN W + ++ G ++V RG ++ E+L +I HSE+ L +E
Sbjct: 33 LGMHKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATIEDLKYILEHSEAKILFLE 92
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K + ++ I ++ + G +SR
Sbjct: 93 NEKVLKKLLENKSSLAKVKTILLIDPPTKW-KDLENSRALLSGIQFLFLEDALLEGEKSR 151
Query: 185 -KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
K + D R E++G D+AT +YTSGTTG PKGVML H++ I + + +P
Sbjct: 152 IKKGDKTYDQRG----ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPG 207
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++E
Sbjct: 208 SYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEG 267
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 268 LYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFI 325
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG
Sbjct: 326 ASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYG 385
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE++ + A G++G P+ T IK+V V G KG+ +G V GY
Sbjct: 386 MTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGY 445
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN+E
Sbjct: 446 YKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLE 494
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEK 602
P +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S K
Sbjct: 495 PAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSK 554
Query: 603 TISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
I+ + + K ++K F +I +H++ + F
Sbjct: 555 EITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418710926|ref|ZP_13271692.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418726527|ref|ZP_13285138.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421085633|ref|ZP_15546484.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102363|ref|ZP_15562967.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|409960437|gb|EKO24191.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410367477|gb|EKP22861.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431198|gb|EKP75558.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410768526|gb|EKR43773.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 624
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K ++ + + K ++K F +I +H+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|418717905|ref|ZP_13277444.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|410786778|gb|EKR80516.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
Length = 624
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+++ YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGAMPSHIQFFFRSAGIRIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K I + + K ++K F +I +H+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEIITFFKNIVKDKISTKAGFKSFEKIAHVHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|24214877|ref|NP_712358.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386074235|ref|YP_005988552.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|24195898|gb|AAN49376.1|AE011388_7 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353458024|gb|AER02569.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 645
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/576 (28%), Positives = 289/576 (50%), Gaps = 31/576 (5%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G+ L DN W + ++ G ++V RG ++ E+L +I HSE+ L +E
Sbjct: 54 LGMHKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATIEDLKYILEHSEAKILFLE 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K + ++ I ++ + G +SR
Sbjct: 114 NEKVLKKLLENKSSLAKVKTILLIDPPTKW-KDLENSRALLSGIQFLFLEDALLEGEKSR 172
Query: 185 -KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
K + D R E++G D+AT +YTSGTTG PKGVML H++ I + + +P
Sbjct: 173 IKKGDKTYDQRG----ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPG 228
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++E
Sbjct: 229 SYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEG 288
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 289 LYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFI 346
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG
Sbjct: 347 ASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSTGIHIIETYG 406
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE++ + A G++G P+ T IK+V V G KG+ +G V GY
Sbjct: 407 MTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGY 466
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN+E
Sbjct: 467 YKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLE 515
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEK 602
P +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S K
Sbjct: 516 PAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSK 575
Query: 603 TISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
++ + + K ++K F +I +H++ + F
Sbjct: 576 EVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|45657613|ref|YP_001699.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600853|gb|AAS70336.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 645
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 144 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 320 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 438 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 546
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K ++ + + K ++K F +I +H+
Sbjct: 547 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHI 606
Query: 628 VDEPF 632
+ + F
Sbjct: 607 LSKEF 611
>gi|418703539|ref|ZP_13264423.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|421116782|ref|ZP_15577157.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410011592|gb|EKO69708.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766675|gb|EKR37358.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
Length = 624
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 288/576 (50%), Gaps = 31/576 (5%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G+ L DN W + ++ G ++V RG ++ E+L +I HSE+ L +E
Sbjct: 33 LGMHKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATIEDLKYILEHSEAKILFLE 92
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K + ++ I ++ + G +SR
Sbjct: 93 NEKVLKKLLENKSSLAKVKTILLIDPPTKW-KDLENSRALLSGIQFLFLEDALLEGEKSR 151
Query: 185 -KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
K + D R E++G D+AT +YTSGTTG PKGVML H++ I + + +P
Sbjct: 152 IKKGDKTYDQRG----ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPG 207
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++E
Sbjct: 208 SYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEG 267
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 268 LYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFI 325
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG
Sbjct: 326 ASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYG 385
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE++ + A G++G P+ T IK+V V G KG+ +G V GY
Sbjct: 386 MTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGY 445
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN+E
Sbjct: 446 YKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLE 494
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEK 602
P +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S K
Sbjct: 495 PAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSK 554
Query: 603 TISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
I + + K ++K F +I +H++ + F
Sbjct: 555 EIITFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418692332|ref|ZP_13253410.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|400357565|gb|EJP13685.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
Length = 624
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 170/605 (28%), Positives = 297/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G +P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGVMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K ++ + + K ++K F +I +H+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|418701054|ref|ZP_13261989.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759952|gb|EKR26154.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 624
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 170/605 (28%), Positives = 298/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K I+ + + K ++K F +I +H+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|417768534|ref|ZP_12416462.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681218|ref|ZP_13242451.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400327039|gb|EJO79295.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409949507|gb|EKN99483.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|455669067|gb|EMF34235.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 624
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 297/605 (49%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 4 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 63
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 64 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLENKSSLAKVKTILLIDPPTKW- 122
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++G D+AT +YTS
Sbjct: 123 KDLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLGGKDLATIIYTS 178
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + +P D+ + LPPWH+ ER + + G +
Sbjct: 179 GTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 238
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + SS ++ + ++++ T
Sbjct: 239 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSHFKQKLFHFAVKMAEITT 298
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ + T + P+ L+D A + L P+ +L+ K++ + G +
Sbjct: 299 SLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSNKILERVRNLFGGKIR 356
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 357 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 416
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 417 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +I
Sbjct: 473 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLI 525
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + D +E S K I + + K ++K F +I +H+
Sbjct: 526 VPFFDRVQEEFQNQAVKIPKDPTEWSSSKEIITFFKNIVKDKISTKAGFKSFEKIAHVHI 585
Query: 628 VDEPF 632
+ + F
Sbjct: 586 LSKEF 590
>gi|398334162|ref|ZP_10518867.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 645
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 170/578 (29%), Positives = 289/578 (50%), Gaps = 35/578 (6%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G+ L DN W + ++ G ++V RG ++ E+L +I HSE+ L +E
Sbjct: 54 LGMNKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATLEDLKYILGHSEAKVLFLE 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K A + I F ++ + G +SR
Sbjct: 114 NEKVLKKLLEDKSSLANVKTILLIDPPSKW-KDLENARAQLSGIKFFFLEDALLEGEKSR 172
Query: 185 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
D ++ ET+ D+AT +YTSGTTG PKGVML H++ I L + VP
Sbjct: 173 IKKGDKPYVQRG---ETLIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPGS 229
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
D+ + LPPWH+ ER + + G + ++V + D+Q+ +P ++SVP ++E L
Sbjct: 230 CNDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLWEGL 289
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
Y I + + R+ + +R++ T + T + P+ V +D A
Sbjct: 290 YKRIHDTVRKAPPLRQQLFHFAVRMAAITTGLQDTIRDSYATTETENPNQKV--LDRFVA 347
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
++ L+P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG+
Sbjct: 348 SVLLLSLYPVKILSYKILQRVRDLFGGKMRFALCGAGAMPSHIQFFFRSAGIPIIETYGM 407
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE++ + A G++G P+ T IK+V + V G KG+ +G V GY+
Sbjct: 408 TETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGRIVSLPGEKGVAWHKGPHVTVGYY 467
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN+EP
Sbjct: 468 KEPEKTAKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEP 516
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVP----DKEEVLMAAKRLSIVHADASELSK 600
+E S I Q++V+GQD++ G +IVP +EE K+ + D SE +
Sbjct: 517 APIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFSAQGKK---IPKDPSEWNS 573
Query: 601 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
K +S+ + + K +++ F +I +H++ + F
Sbjct: 574 SKEVSVFFKNIVKDKISTRAGFKSFEKIAHVHILPKEF 611
>gi|374850349|dbj|BAL53340.1| long-chain acyl-CoA synthetase [uncultured Bacteroidetes bacterium]
Length = 611
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 295/591 (49%), Gaps = 61/591 (10%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L +++ +A L +G++ +++ L S+N W++ D +L G ++V ++
Sbjct: 38 RLRADVVAYALALEELGLEAGDRVGLLSENRYEWVITDFAVLLAGGVDVPMFPSLVEPQI 97
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD-IVEEIPVFSY 173
+I NHS+SV AV + F ++ + +I+ PD + E I V+
Sbjct: 98 AYILNHSQSVFCAVSSSYQFRKLLNIADRLETLEGVIVF--DDVPGLPDRLGERIRVYRL 155
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+++ G E ++ R+ E DD+ T +YTSGTTG PKGVMLTH+N+L
Sbjct: 156 SDMLARGSEMQRTVDVHGTIRRLL--ERTRGDDLCTIIYTSGTTGTPKGVMLTHRNILSN 213
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLKDDLQRYQP 291
+ + ++ + D FLS LP H YER G++ S G ++ ++ +L+ +P
Sbjct: 214 VEAARSVIAVDERDVFLSYLPMCHSYERTTGFYTAFASGGTTAFAESLETVRTNLREVRP 273
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M SVP ++E + GI Q+ S RR + + I G R Q++
Sbjct: 274 TIMTSVPQLFERIRGGIYAQMAQQSPLRRSIFEWAVTI------------GLRRLREQEE 321
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
RI A + + LAE+ V++KIQ A+G + VSGGG L I F
Sbjct: 322 Q-----------GRISAATAFG-YRLAERFVFRKIQLAVGGRLRFFVSGGGPLAPEIGRF 369
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ AIG+ + GYGLTE+SPV+ R N G+VG P+ EI+I D+ G
Sbjct: 370 FWAIGLPILEGYGLTEASPVLTVNRLDDNEFGTVGKPLPGVEIRIDDS-----------G 418
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGR 529
+ RG +M+GY++NP T+ A+D DGWL+TGD+G W S+R G L++ R
Sbjct: 419 EILARGPNIMRGYWQNPEETRAAIDADGWLHTGDVGRW---------SQR--GNLMITDR 467
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ IV S G+NV P +E A + ++ Q+VVIG + A+IVP+ EE L A R
Sbjct: 468 IKNLIVTSGGKNVAPQVVERALKQWEVVAQVVVIGDGRPFCTALIVPN-EEALRAFLRAQ 526
Query: 590 IVHADA--SELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 635
+ A A SEL + + + + EL + + ++ I +V EPFTV
Sbjct: 527 GIDASAQLSELCTDLRVLGAVMRELEHYQRDLAKYERVRRIAMVAEPFTVE 577
>gi|418747259|ref|ZP_13303569.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792053|gb|EKR89998.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 645
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/608 (28%), Positives = 297/608 (48%), Gaps = 37/608 (6%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ + + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 VRQEDGDFRGISYRDWYENLKNLSVFLMDLGMQKGNTAGLICDNRYEWSLCSLALVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ ++L +I HSE+ L +EN + ++ E A ++ I+L+ W
Sbjct: 85 VDVPRGCDATLDDLKYILEHSEAKLLFLENEKVLKKLLEDKSVLANVKTILLIDPRTKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
K A + + F ++ + G SR D + ++ E + D+AT +YTSG
Sbjct: 144 KDLENAHAALPGVKFFFLEDALLEGERSRTKKGDKSYIQRG---EVLIGKDLATIIYTSG 200
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG PKGVML H+N I L + VP D+ + LPPWH+ ER + + G +
Sbjct: 201 TTGAPKGVMLNHRNFTWGIHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMA 260
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
++V + D+Q+ +P ++SVP ++E LY I + + R+ + A + ++ T+
Sbjct: 261 CSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTS 320
Query: 336 FK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ I + + T + ID A + L+P+ +L+ K++ + G +
Sbjct: 321 LQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V + V G KG+ +G V GY+K P T Q L +DGWL++GDI + H+
Sbjct: 438 LVGEDGKIVTTPGQKGVAWHKGPHVTLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLI 546
Query: 575 VP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGP 624
VP D+ EE K+ + D ++ + K +S + + K ++K F +I
Sbjct: 547 VPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAH 603
Query: 625 IHVVDEPF 632
IHV+ + F
Sbjct: 604 IHVLSKEF 611
>gi|119512748|ref|ZP_01631819.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
gi|119462616|gb|EAW43582.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
Length = 392
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 208/354 (58%), Gaps = 32/354 (9%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L ++I FA GL+ +GV K+ LFS+N+ RWL+ADQG++ GA++ VR S++S +EL
Sbjct: 58 ELWEQIQQFAAGLQSLGVSLRAKVGLFSENNLRWLIADQGIMVAGAVDAVRSSQASQDEL 117
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++I +SE+ AL VEN N++ E + ++ I+L ++ P + V ++
Sbjct: 118 IYILRNSEATALVVENQATLNKLVEQI-HDLPIKLAIVLSDEEVETHPGL----KVLNFS 172
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I+++G S + FS R + +AT VYTSGTTG PK ML+H NLLHQ+
Sbjct: 173 QIMEIG--SNQTFSPVEQTR----------ESLATLVYTSGTTGQPKATMLSHGNLLHQV 220
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
SL +V E GD+ LS+LP WH+YER YF FS+G L+YT +R+ K DL+ +P Y
Sbjct: 221 SSLAVVVQLEAGDRVLSILPTWHIYERVIEYFAFSQGCTLIYTNLRHFKQDLKVQKPQYF 280
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+SVP + E+++ + KQ SA +R + ++ +S Y +RI L Q+ PS
Sbjct: 281 VSVPRLLESIHDEVHKQFRQESAQKRRLINYMLAMSDRYIRARRIVHRLSL--EQQNPS- 337
Query: 355 LVALIDWLW----ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
+W AR AILWP+H LA++L+YKK++ IG K + GGGSL
Sbjct: 338 -------MWQRQRARTQTAILWPIHALADRLIYKKVREQIGAELKQTICGGGSL 384
>gi|418719367|ref|ZP_13278567.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418738800|ref|ZP_13295193.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410744520|gb|EKQ93261.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410745498|gb|EKQ98408.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 645
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 284/578 (49%), Gaps = 35/578 (6%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G++ L DN W + ++ G ++V RG ++ ++L +I HSE+ L +E
Sbjct: 54 LGMQKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATLDDLKYILEHSEAKLLFLE 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K A + + F ++ + G +SR
Sbjct: 114 NEKVLKKLLEDKSSLANVKMILLIDPPTKW-KDVENARTTLPGVKFFFLEDALLEGEKSR 172
Query: 185 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
D ++ E + D+AT +YTSGTTG PKGVML H++ I L + VP
Sbjct: 173 LKKGDKVYTQRG---EILIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFVPCS 229
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
D+ + LPPWH+ ER + + G + +++ + D+QR +P ++SVP ++E L
Sbjct: 230 CNDRTIIFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQRVKPTVLVSVPRLWEGL 289
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
Y I + + R+ + +R++ T+ + T + P ID A
Sbjct: 290 YKRIHDTVRKAPPLRQKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDRFVA 347
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
L+P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG+
Sbjct: 348 SAFLLFLYPIKILSYKILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGM 407
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE++ + A G++G P+ T IK+V + G KGI +G V GY+
Sbjct: 408 TETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAWHKGPHVTVGYY 467
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
K P T + L +DGWL++GDI + H+ G L GRAKDTIVLS GEN+EP
Sbjct: 468 KEPEKTAKTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEP 516
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSK 600
+E S I Q++V+GQD++ G +IVP D+ EE K+L D +E +
Sbjct: 517 APIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KDPTEWNS 573
Query: 601 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
K +S + + K ++K F +I IH++ + F
Sbjct: 574 SKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILPKEF 611
>gi|398342591|ref|ZP_10527294.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 545
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 262/519 (50%), Gaps = 76/519 (14%)
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E++ GR+ R+ S + + R ++ S+D+ T +YTSGTTG PKGV LTH N++ Q+
Sbjct: 3 ELLSRGRKLREQGSRNVEER----VLSLKSEDLFTIIYTSGTTGQPKGVQLTHSNMIFQV 58
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 294
S+ I+ D+ +S+LP WH++ER Y G Y+ + +LK +L ++P +
Sbjct: 59 SSVSPILEITENDRAISILPIWHIFERFMEYCFLHVGGTTYYSNIPDLKQNLTDFKPTFF 118
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR--NQKQP 352
+ P V+E + +GI ++ R+ R L ++++ Y+ K + F L + K
Sbjct: 119 GAAPRVWEMICNGILTRMTDPDRTSRL-GRILFKLAYTYSEKKNEAKAFFLGNELDLKGR 177
Query: 353 SYLVALIDWLWA---------------RIICAILWPLHLLAEK----------------- 380
S+ ++ + +CA L P A++
Sbjct: 178 SFFGTILKGIRMTFEYSFFGPFTLSSISFLCATLIPFEYAAKEIKILLYTIGVIGLLFNS 237
Query: 381 -----LVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 433
LV KI+ I G K VSGGG+LP +D +G+++ GYG+TE+SPVI+
Sbjct: 238 FTLDLLVLSKIRRDIVGGFLKTSVSGGGALPNRVDRTLNHLGIRLLEGYGMTETSPVISL 297
Query: 434 RRPTCNVLGSVGHPINHTEIKIVDAETNEVL------------PAGSKGIVKVRGSQVMQ 481
RR V+GSVGH + T ++I E NEVL G KGIV G +M+
Sbjct: 298 RRMDKFVIGSVGHILPKTRLQI-RTEKNEVLSEIDENGRFTKGKPGQKGIVFASGPHIMK 356
Query: 482 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 541
GY+KNP T AL+ GW+NTGDIG ++ + + L L GRAK+TIVL GEN
Sbjct: 357 GYYKNPDITADALNA-GWMNTGDIGIVSYNRT----------LTLAGRAKETIVLRGGEN 405
Query: 542 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 600
VEP+ +E S I Q +VIGQDQ+ GAIIVPD E ++ AK I V ++ L +
Sbjct: 406 VEPVPIEARLQVSKYISQCMVIGQDQKNLGAIIVPDFESLIAWAKENYIPVDSEQELLRR 465
Query: 601 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 634
++ I L E++ + K Q+ P + +PF V
Sbjct: 466 KQVIDLYRSEIKALNNARSGFKSFEQVTPFLFIVKPFEV 504
>gi|398339139|ref|ZP_10523842.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
gi|418676702|ref|ZP_13237980.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421132459|ref|ZP_15592627.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400322602|gb|EJO70458.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410356224|gb|EKP03581.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 298/606 (49%), Gaps = 33/606 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMQKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLEDKSSLAKVKTILLIDPPIKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++ D+AT +YTS
Sbjct: 144 KNLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLVGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + VP D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + S ++ + ++I+ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
+ T + P+ L+D A + + P+ +L+ K++ K+++ G
Sbjct: 320 NLQDTIRDSYATTKMENPNQ--KLLDRFVASVFLISMIPIKILSYKIL-KRVRDLFGGRI 376
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
+ + G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T I
Sbjct: 377 RFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAI 436
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
K+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 437 KLVGENGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT 493
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +
Sbjct: 494 --------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVL 545
Query: 574 IVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIH 626
IVP + V + ++ + D E + K ++ + + K ++K F +I +H
Sbjct: 546 IVPFFDRVQEEFQNQAVKIPKDPGEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVH 605
Query: 627 VVDEPF 632
++ + F
Sbjct: 606 ILSKEF 611
>gi|418688436|ref|ZP_13249592.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739761|ref|ZP_13296142.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737293|gb|EKQ82035.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752883|gb|EKR09855.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 298/606 (49%), Gaps = 33/606 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMQKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLEDKSSLAKVKTILLIDPPIKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++ D+AT +YTS
Sbjct: 144 KNLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLVGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + VP D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + S ++ + ++I+ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
+ T + P+ L+D A + + P+ +L+ K++ K+++ G
Sbjct: 320 NLQDTIRDSYATTKMENPNQ--KLLDRFVASVFLISMIPIKILSYKIL-KRVRDLFGGRI 376
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
+ + G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T I
Sbjct: 377 RFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAI 436
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
K+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 437 KLVGENGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT 493
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +
Sbjct: 494 --------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVL 545
Query: 574 IVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIH 626
IVP + V + ++ + D E + K ++ + + K ++K F +I +H
Sbjct: 546 IVPFFDRVQEEFQNQAVKIPKDPGEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVH 605
Query: 627 VVDEPF 632
++ + F
Sbjct: 606 ILSKEF 611
>gi|421090896|ref|ZP_15551686.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410000482|gb|EKO51112.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 645
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 298/606 (49%), Gaps = 33/606 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMQKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLEDKSSLAKVKTILLIDPPIKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++ D+AT +YTS
Sbjct: 144 KNLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLVGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + VP D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILSLPPWHIAERLLETTLIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + S ++ + ++I+ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
+ T + P+ L+D A + + P+ +L+ K++ K+++ G
Sbjct: 320 NLQDTIRDSYATTKMENPNQ--KLLDRFVASVFLISMIPIKILSYKIL-KRVRDLFGGRI 376
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
+ + G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T I
Sbjct: 377 RFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAI 436
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
K+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 437 KLVGENGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT 493
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQDQ+ G +
Sbjct: 494 --------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDQKNLGVL 545
Query: 574 IVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIH 626
IVP + V + ++ + D E + K ++ + + K ++K F +I +H
Sbjct: 546 IVPFFDRVQEEFQNQAVKIPKDPGEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVH 605
Query: 627 VVDEPF 632
++ + F
Sbjct: 606 ILSKEF 611
>gi|410450615|ref|ZP_11304649.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|418752471|ref|ZP_13308732.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|422004493|ref|ZP_16351710.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|409967201|gb|EKO35037.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410015493|gb|EKO77591.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|417256795|gb|EKT86209.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|456876738|gb|EMF91817.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 645
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 170/608 (27%), Positives = 297/608 (48%), Gaps = 37/608 (6%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ + + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 VRQEDGDFRGISYRDWYENLKNLSVFLMDLGMQKGNTAGLICDNRYEWSLCSLALVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ ++L +I HSE+ L +EN + ++ E A ++ I+L+ W
Sbjct: 85 VDVPRGCDATLDDLKYILEHSEAKLLFLENEKVLKKLLEDKSVLANVKTILLIDPRTKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
K A + + F ++ + G SR D + ++ E + D+AT +YTSG
Sbjct: 144 KDLENAHAALPGVKFFFLEDALLEGERSRTKKGDKSYIQRG---EVLIGKDLATIIYTSG 200
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG PKGVML H++ I L + VP D+ + LPPWH+ ER + + G +
Sbjct: 201 TTGAPKGVMLNHRSFTWGIHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMA 260
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
++V + D+Q+ +P ++SVP ++E LY I + + R+ + A + ++ T+
Sbjct: 261 CSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTS 320
Query: 336 FK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ I + + T + ID A + L+P+ +L+ K++ + G +
Sbjct: 321 LQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V + V G KG+ +G V GY+K P T Q L +DGWL++GDI + H+
Sbjct: 438 LVGEDGKIVTTPGQKGVAWHKGPHVTLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLI 546
Query: 575 VP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGP 624
VP D+ EE K+ + D ++ + K +S + + K ++K F +I
Sbjct: 547 VPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAH 603
Query: 625 IHVVDEPF 632
IH++ + F
Sbjct: 604 IHILSKEF 611
>gi|421094230|ref|ZP_15554950.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410362956|gb|EKP13989.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|456887901|gb|EMF98914.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 645
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/578 (29%), Positives = 284/578 (49%), Gaps = 35/578 (6%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G++ L DN W + ++ G ++V RG ++ ++L +I HSE+ L +E
Sbjct: 54 LGMQKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATLDDLKYILEHSEAKLLFLE 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K A + + F ++ + G +SR
Sbjct: 114 NEKVLKKLLEDKSSLANVKMILLIDPPTKW-KDVENARTTLPGVKFFFLEDALLEGEKSR 172
Query: 185 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
D ++ E + D+AT +YTSGTTG PKGVML H++ I L + VP
Sbjct: 173 LKKGDKVYTQRG---EILIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFVPCS 229
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
D+ + LPPWH+ ER + + G + +++ + D+QR +P ++SVP ++E L
Sbjct: 230 CNDRTIIFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQRVKPTVLVSVPRLWEGL 289
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
Y I + + R+ + +R++ T+ + T + P ID A
Sbjct: 290 YKRIHDTVRKAPPLRQKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDRFVA 347
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
L+P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG+
Sbjct: 348 SAFLLFLYPIKILSYKILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGM 407
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE++ + A G++G P+ T IK+V + G KGI +G V GY+
Sbjct: 408 TETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAWHKGPHVTVGYY 467
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
K P T + L +DGWL++GDI + H+ G L GRAKDTIVLS GEN+EP
Sbjct: 468 KEPEKTAKTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEP 516
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSK 600
+E S I Q++V+GQD++ G +IVP D+ EE K+L D +E +
Sbjct: 517 APIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KDPTEWNS 573
Query: 601 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
K ++ + + K ++K F +I IH++ + F
Sbjct: 574 SKEVNSFFKNIVKDKISTKAGFKSFEKIAHIHLLPKEF 611
>gi|410940968|ref|ZP_11372767.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783527|gb|EKR72519.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 298/608 (49%), Gaps = 37/608 (6%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMQKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLEDKSSLAKVKTILLIDPPIKWK 144
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
+ + +F D +++ G +SR K + D R E++ D+AT +YTS
Sbjct: 145 NLENFRALLSGIQFLFLEDALLE-GEKSRIKKGDKTYDQRG----ESLVGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + VP D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIAERLLETALIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + S ++ + ++++ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPPLKQKLFHFAVKMAEIIT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ T ++P+ L+D A I + P+ +L+ K++ + G +
Sbjct: 320 NLQDTIRDSYATTETEKPNQ--KLLDRFIAGIFLLSMLPIKILSYKILERVRDLFGGRIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V + V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 438 LVGEDGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLI 546
Query: 575 VPD----KEEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGP 624
VP +EE + K++ D E + K ++ + + K ++K F +I
Sbjct: 547 VPFFDRVQEEFQIQGKKIP---KDPIEWNSSKEVATFFKNIVKDKISTKAGFKSFEKIAH 603
Query: 625 IHVVDEPF 632
+H++ + F
Sbjct: 604 VHILSKEF 611
>gi|421110232|ref|ZP_15570733.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410804417|gb|EKS10534.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 645
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 297/608 (48%), Gaps = 37/608 (6%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ + + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 VRQEDGDFRGISYRDWYENLKNLSVFLMDLGMQKGNTAGLICDNRYEWSLCSLALVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ ++L +I HSE+ L +EN + ++ E A ++ I+L+ W
Sbjct: 85 VDVPRGCDATLDDLKYILEHSEAKLLFLENEKVLKKLLEDKSVLANVKTILLIDPRTKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
K A + + F ++ + G SR D + ++ E + D+AT +YTSG
Sbjct: 144 KDLENAHAALPGVKFFFLEDALLEGERSRTKKGDKSYIQRG---EVLIGKDLATIIYTSG 200
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG PKGVML H++ I L + VP D+ + LPPWH+ ER + + G +
Sbjct: 201 TTGTPKGVMLNHRSFTWGIHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMA 260
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
++V + D+Q+ +P ++SVP ++E LY I + + R+ + A + ++ T+
Sbjct: 261 CSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTS 320
Query: 336 FK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ I + + T + ID A + L+P+ +L+ K++ + G +
Sbjct: 321 LQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V + V G KG+ +G + GY+K P T Q L +DGWL++GDI + H+
Sbjct: 438 LVGEDGKIVTIPGQKGVAWHKGPHITLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLI 546
Query: 575 VP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGP 624
VP D+ EE K+ + D ++ + K +S + + K ++K F +I
Sbjct: 547 VPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAH 603
Query: 625 IHVVDEPF 632
IH++ + F
Sbjct: 604 IHILSKEF 611
>gi|359686030|ref|ZP_09256031.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 645
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 170/608 (27%), Positives = 297/608 (48%), Gaps = 37/608 (6%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ + + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 VRQEDGDFRGISYRDWYENLKNLSVFLMDLGMQKGNTAGLICDNRYEWSLCSLALVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ ++L +I HSE+ L +EN + ++ E A ++ I+L+ W
Sbjct: 85 VDVPRGCDATLDDLKYILEHSEAKLLFLENEKVLKKLLEDKSVLANVKTILLIDPRTKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
K A + + F ++ + G SR D + ++ E + D+AT +YTSG
Sbjct: 144 KDLENAHAALPGVKFFFLEDALLEGERSRTKKGDKSYIQRG---EVLIGKDLATIIYTSG 200
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG PKGVML H++ I L + VP D+ + LPPWH+ ER + + G +
Sbjct: 201 TTGAPKGVMLNHRSFTWGIHQLQEFVPCSYEDRTIVFLPPWHIAERLLETTLIAWGASMA 260
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
++V + D+Q+ +P ++SVP ++E LY I + + R+ + A + ++ T+
Sbjct: 261 CSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTS 320
Query: 336 FK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ I + + T + ID A + L+P+ +L+ K++ + G +
Sbjct: 321 LQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILSHKILQRVRDLFGGRIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V + V G KG+ +G V GY+K P T Q L +DGWL++GDI + H+
Sbjct: 438 LVGEDGKIVTIPGQKGVAWHKGPHVTLGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLI 546
Query: 575 VP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGP 624
VP D+ EE K+ + D ++ + K +S + + K ++K F +I
Sbjct: 547 VPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAH 603
Query: 625 IHVVDEPF 632
IH++ + F
Sbjct: 604 IHILSKEF 611
>gi|417780670|ref|ZP_12428431.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779379|gb|EKR63996.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 645
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 173/610 (28%), Positives = 300/610 (49%), Gaps = 41/610 (6%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + + FR + + + + L +G++ L DN W + ++ G
Sbjct: 25 IRQEDGDFRGISYQDWYENLKNLSVFLIDLGMQKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ ++L +I HSE+ L +EN + ++ E S + ++ ++L+ W
Sbjct: 85 VDVPRGCDATLDDLKYILEHSEAKLLFLENEKVLKKLLEDKSSLSNVKTVLLIDPPAKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
K A + + F ++ + G +SR D ++ E + D+AT +YTSG
Sbjct: 144 KDLENARTTLPGVKFFFLEDALLEGEKSRIKKGDKPYTQRG---EILIGKDLATIIYTSG 200
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG PKGVML H++ I L + VP D+ + LPPWH+ ER + + G +
Sbjct: 201 TTGAPKGVMLNHRSFTWGIHQLQEFVPCSCNDRTIIFLPPWHIAERLLETTLIAWGASMA 260
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
+++ + D+Q+ +P ++SVP ++E LY I + + R+ + +R++ T+
Sbjct: 261 CSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLRQKLFHVAVRMAELTTS 320
Query: 336 FK-RIYEGFCLT--RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+ I + + T N +Q + ID A L+P+ +L+ K++ K G
Sbjct: 321 LQDTIRDSYATTEIENPRQKT-----IDRFVASAFLLFLYPIKILSYKILQKVRDLFGGR 375
Query: 393 SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 452
+ + G G++P HI F+ + G+ + YG+TE++ + A ++G P+ T
Sbjct: 376 IRFALCGAGAMPPHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLPKNDAIGAPLPGTA 435
Query: 453 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
IK+V + V G KGI +G V GY+K P T +AL +DGWL++GDI + H
Sbjct: 436 IKLVGEDGKIVTAPGEKGIAWHKGPHVTVGYYKEPEKTAKAL-QDGWLDSGDI--LTWTH 492
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
+ G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G
Sbjct: 493 T--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDKKNLGV 544
Query: 573 IIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RKWTSKCSF----QI 622
+IVP D+ EE K+L D +E + K +S + + K ++K F +I
Sbjct: 545 LIVPFFDRVYEEFQSQGKKLP---KDPTEWNSSKEVSSFFKNIVKDKISTKAGFKTFEKI 601
Query: 623 GPIHVVDEPF 632
I+++ + F
Sbjct: 602 AHIYILPKEF 611
>gi|421097581|ref|ZP_15558266.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799408|gb|EKS01483.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 645
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 168/578 (29%), Positives = 286/578 (49%), Gaps = 35/578 (6%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G++ L DN W + ++ G ++V RG ++ ++L +I HSE+ L +E
Sbjct: 54 LGMQKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATLDDLKYILEHSEAKLLFLE 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K A + + F ++ + G SR
Sbjct: 114 NEKILKKLLEDKSSLANVKTILLIDPHTKW-KDLENARTALPGVKFFFLEDALLEGERSR 172
Query: 185 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
D +++ E + D+AT +YTSGTTG PKGVML H++ I L + VP
Sbjct: 173 IKKGDKLYSQRG---EILIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPCS 229
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++E L
Sbjct: 230 CNDRTIIFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGL 289
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
Y I + + ++ + +R++ T+ + T + P ID A
Sbjct: 290 YKRIHDTVRKAPPLKQKLFHVAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDRFVA 347
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
L+P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG+
Sbjct: 348 SAFLLFLYPIKILSYKILQRVKDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGM 407
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE++ + A G++G P+ T IK+V + V G KGI +G V GY+
Sbjct: 408 TETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGRIVTAPGEKGIAWHKGPHVTVGYY 467
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN+EP
Sbjct: 468 KEPEKTAKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEP 516
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSK 600
+E S I Q++V+GQD++ G +IVP D+ EE K+L D +E +
Sbjct: 517 APIEAKLTESEFISQVIVVGQDKKNLGVLIVPFFDRVYEEFQSKEKKLP---KDPTEWNS 573
Query: 601 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
K +S + + K ++K F +I I+++ + F
Sbjct: 574 SKEVSSFFKNIVKDKISTKAGFKSFEKIAHIYILPKEF 611
>gi|421107360|ref|ZP_15567912.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410007376|gb|EKO61086.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 162/576 (28%), Positives = 287/576 (49%), Gaps = 31/576 (5%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G++ L DN W + ++ G ++V RG ++ E+L +I HSE+ L +E
Sbjct: 54 LGMQKGNTAGLICDNRYEWSLCSLSLVTIGCVDVPRGCDATIEDLKYILEHSEAKILFLE 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRESR 184
N + ++ E S A ++ I+L+ W K + ++ I ++ + G +SR
Sbjct: 114 NEKVLKKLLEDKSSLAKVKTILLIDPPIKW-KNLENSRALLSGIQFLFLEDALLEGEKSR 172
Query: 185 -KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
K + D R E++ D+AT +YTSGTTG PKGVML H++ I + + VP
Sbjct: 173 IKKGDKTYDQRG----ESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFVPG 228
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++E
Sbjct: 229 SYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEG 288
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
LY I + S ++ + ++I+ T + T + P+ L+D
Sbjct: 289 LYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKTENPNQ--KLLDRFV 346
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
A + + P+ +L+ K++ + G + + G G++P HI F+ + G+ + YG
Sbjct: 347 ASVFLISMIPIKILSYKILERVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIETYG 406
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE++ + A G++G P+ T IK+V V G KG+ +G V GY
Sbjct: 407 MTETTGIGAVGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGY 466
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN+E
Sbjct: 467 YKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLE 515
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEK 602
P +E S I Q++V+GQD++ G +IVP + V + ++ + + ++ + K
Sbjct: 516 PAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIPKEPTKWNSSK 575
Query: 603 TISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 632
I+ + + K ++K F +I +H++ + F
Sbjct: 576 EITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|374586245|ref|ZP_09659337.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875106|gb|EHQ07100.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 630
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 279/514 (54%), Gaps = 27/514 (5%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
GL G+K +++ D S WL + ++ GAI V R + + +++L+I NH+E
Sbjct: 50 GLADDGLKRGDRVLFLCDPSSYWLFTNVAIITAGAITVPRATDVTEDDILYIANHAECTR 109
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
V+N + R+ + ++ I ++ + ++ + D ++ L ++
Sbjct: 110 AIVQNRKTKERLEKLKDRIPTLKTIHVMQDEGHNL---------LTGDDSLVALTKKGEA 160
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 245
A +N + + + + +YTSGTTG PKG M T + + + ++ + A
Sbjct: 161 ALK-ANAQLVADMAKRLDPESLCMIIYTSGTTGAPKGAMQTQQGWIACVENVIPRLQARK 219
Query: 246 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY 305
GD+ +S+LPPWHV+E+ Y G++ M T + LK+DL+ ++P SVP ++E++Y
Sbjct: 220 GDRAISLLPPWHVFEQVIEYAFLYLGLQFMITDISLLKEDLKEFKPTIFPSVPRIWESVY 279
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
+GI ++ S A++ V + + + + + G+ L ++P+ + +L+ L
Sbjct: 280 NGIIGKVKKESTAKQKVFNFFLSVGATWHRWHAVAFGYDL--QIEKPNAIASLLRRL-LA 336
Query: 366 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
+L L K+++K I+ A+G + +SGG +LP +D F A+G++V GYG+
Sbjct: 337 FFVLLLLSPLKLLSKVIFKGIREALGGQMRVSLSGGSALPGVVDRFLSAVGLRVLEGYGM 396
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV--LPAGSKGIVKVRGSQVMQG 482
TE+S VI+AR V G++G P++ EI++ + + +V +P G+KG + V+ QVM+G
Sbjct: 397 TETSAVISARLIEGPVSGTIGKPLDGYEIRLKNEQGVDVKHIP-GAKGTLWVKSVQVMKG 455
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y++ P D+DG+ +TGD+ + H G LV GRAKDTIVL++GEN+
Sbjct: 456 YYRRPELNDIVFDKDGFFDTGDLMMLT-HR---------GELVFAGRAKDTIVLASGENL 505
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
EP+ LE+ L S I Q++V+G D++ P A+IVP
Sbjct: 506 EPVPLEDRLLISDYIDQVMVVGDDKKYPAALIVP 539
>gi|408792990|ref|ZP_11204600.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464400|gb|EKJ88125.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 641
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 181/592 (30%), Positives = 292/592 (49%), Gaps = 47/592 (7%)
Query: 62 DFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHS 121
+ ++GL + K +++ + +D +WL + G ++V RG+ ++ +++ +I NH+
Sbjct: 51 NISKGLLYLNAKAGDRIGIIADVGHQWLQVSMAITNIGCVDVPRGTDATLDDIGYILNHA 110
Query: 122 ESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR 181
E + +E + + L K I+L+G+ S D+ IP+ ++ ++
Sbjct: 111 ECKIVFIETEKALQKFLPEL--KKLKIETIILFGETKSEKTDLA--IPILNFSDL----- 161
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY--- 238
+K +D H + + I +DIAT +YTSGTTG PKGVMLTH ++L +I SL
Sbjct: 162 --KKYGVTIDDENFHKRGKQIQEEDIATIIYTSGTTGKPKGVMLTHGSILFEINSLVAEF 219
Query: 239 --DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 296
V GD L LPPWH ER F GI++ +T+V L DL + +P + +
Sbjct: 220 RNTGVQVGEGDVTLGFLPPWHSGERIFETICFYSGIKIAFTSVPELGKDLAKTKPTILFT 279
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-----AFKRIYEGFCLTRNQKQ 351
VP V+E+ Y I+ I S ++ + L+ S ++ AF RI R +
Sbjct: 280 VPRVWESFYDKIKDTIHKSGLFKKYFLKILVWNSMNFSLCYDKAFDRI------PRLNES 333
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
++L L ++ I I PL L KLV KI S +G + +G G+L +D F
Sbjct: 334 KTFLQVL-SQIFHLIKLIIYLPL-LPISKLVLSKILSVLGGRLRYAFAGAGALQAEVDRF 391
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
AIG+ + YG+TE+S V R +G+VG PI+ IK+++ E+ G KG
Sbjct: 392 MYAIGMPILEVYGMTENSGVSTIRHYNDFSVGNVGKPIHGVTIKLINEFGKEITKPGIKG 451
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ G M+GY+ TK L D WLN+GD+ G L GRA
Sbjct: 452 VAHHHGFHNMKGYYLEEEKTKAVLTADRWLNSGDL----------LVYTAQGNLKFAGRA 501
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKEEVLMAAKRL 588
KDTIVLS GENVEP +E +S I Q VV+GQD++ A+I+ DK + + + +
Sbjct: 502 KDTIVLSGGENVEPEPIEICLKQSEFIDQAVVVGQDKKSLSALILLNLDKVQSYLNLQSI 561
Query: 589 SIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTVN 635
S+ + +E + L+ E++++ S K F+ I I ++ PF ++
Sbjct: 562 SLDLNNCIFNEEETILKLIKEEVKRFVSDKNGFKSFERITNIFILQNPFVIH 613
>gi|418696266|ref|ZP_13257275.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955795|gb|EKO14727.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 645
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 166/605 (27%), Positives = 295/605 (48%), Gaps = 31/605 (5%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I + FR + + + + L +G+ L DN W + ++ G
Sbjct: 25 IREESGDFRGISYKDWYENLKNLSTFLIDLGMHKGNTAGLICDNRYEWSLCSLSLVTIGC 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WG 155
++V RG ++ E+L +I HSE+ L +EN + ++ E S A ++ I+L+ W
Sbjct: 85 VDVPRGCDATIEDLKYILEHSEAKILFLENEKVLKKLLEDKSSLAKVKTILLIDPPIKW- 143
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTS 214
K + ++ I ++ + G +SR K + D R E++ D+AT +YTS
Sbjct: 144 KNLENSRALLSGIQFLFLEDALLEGEKSRIKKGDKTYDQRG----ESLVGKDLATIIYTS 199
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
GTTG PKGVML H++ I + + VP D+ + LPPWH+ ER + + G +
Sbjct: 200 GTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIAERLLETTLIAWGASM 259
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+++ + D+Q+ +P ++SVP ++E LY I + S ++ + ++I+ T
Sbjct: 260 ACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITT 319
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ T + P+ L+D A + + P+ +L+ K++ + G +
Sbjct: 320 NLQDTIRDSYATTKTENPNQ--KLLDRFVASVFLISMIPIKILSYKILERVRDLFGGRIR 377
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ G G++P HI F+ + G+ + YG+TE++ + A G++G P+ T IK
Sbjct: 378 FALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAVGEFPIPKNGAIGAPLPGTAIK 437
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+V V G KG+ +G V GY+K P T +AL +DGWL++GDI + H+
Sbjct: 438 LVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L GRAKDTIVLS GEN+EP +E S I Q++V+GQD++ G +I
Sbjct: 494 -------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQVIVVGQDRKNLGVLI 546
Query: 575 VPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHV 627
VP + V + ++ + + ++ + K I+ + + K ++K F +I +H+
Sbjct: 547 VPFFDRVQEEFQNQAVKIPKEPTKWNSSKEITTFFKNIVKDKISTKAGFKSFEKIAHVHI 606
Query: 628 VDEPF 632
+ + F
Sbjct: 607 LSKEF 611
>gi|225181270|ref|ZP_03734715.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
gi|225168050|gb|EEG76856.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
Length = 642
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 288/587 (49%), Gaps = 61/587 (10%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
E+ D + GL +GV+P+++++L WL++D +L+ AINV + +++ HI
Sbjct: 49 EVKDLSLGLVSLGVQPKDRVALMMTTQGNWLISDLAILSAAAINVPVYPTNRGQQIAHIL 108
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS-----SVAPDIVEEIPVFSY 173
N SE+ + V + + I + + ++ II+ G KS + ++ +E V +
Sbjct: 109 NDSEAGVIIVGSVDLLREIWQVWDTIPKLKTIIIPTGSKSEHALSDITGNLGDERQVLEF 168
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
E+ ++GRE F+ N +++++ DD+A+ +YTSGTTGNPKGVMLTH N L
Sbjct: 169 AEVQEMGRE----FARENPDVYQERWQSVEKDDLASVLYTSGTTGNPKGVMLTHDNFLSN 224
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQP 291
+R+ + V + LS LP HV ER GY++ G + Y ++ L D++Q +P
Sbjct: 225 VRNALERVEVHDWFVTLSFLPLSHVLERTAGYYMPMLVGCTIAYAESIDTLADNMQEVRP 284
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
H+ +SVP VYE +Y+GI ++ S ++ RI F R + L K+
Sbjct: 285 HFFVSVPRVYEKVYAGIMDKVNAGSPIKK-------RIFFWAKGVAR--QNAQLFVEGKE 335
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
PS LA+KLV+ I+ IG + +SGG L + F
Sbjct: 336 PSGFFGF---------------KFSLADKLVFSTIRERIGGRLEYCISGGAPLGRELAEF 380
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ + +++ GYGLTE+SP+I GSVG I E++I E E+L
Sbjct: 381 FNGMNIRILEGYGLTETSPIITFNCLKNMRYGSVGQVIAQGEVRI--DEDGEILS----- 433
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+G Q GY+ NP AT++ L D WL TGDIG++ G L + R
Sbjct: 434 ----KGPQNCPGYYNNPEATEELLAGD-WLKTGDIGYLDKD----------GFLFITDRK 478
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
KD IV S G+NV P LE I+Q V+ G + AI+VP+ E++ AK +
Sbjct: 479 KDIIVTSGGKNVAPQPLEGLMTSDRYIQQAVIQGDKKNYLVAILVPNFEQLEGYAKEKGL 538
Query: 591 VHADASELSKEKTISLLYGE--LRKWTSKCSF-QIGPIHVVDEPFTV 634
+ SEL K + LY + + ++ F Q+ I++++ FT+
Sbjct: 539 QYGSRSELLKLPEVRKLYAKRVAKALQNEPRFAQVKRIYLMENEFTL 585
>gi|392405544|ref|YP_006442156.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613498|gb|AFM14650.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 631
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 281/537 (52%), Gaps = 41/537 (7%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
++ + + + A GL+ GV +++++L D+S W++AD ++A GA+ V RG+ + +++
Sbjct: 40 RIHELVTELAAGLKSAGVAADDRVTLLCDSSPNWILADAAIVAAGAVCVPRGTDVTDDDI 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
L+I HSES V+ + +R+ + A+ I +L S +A S +
Sbjct: 100 LYIVGHSESRWAIVQKAKDRDRLLKFQKELPALEKIWVLEDDDSELAAGES------SAE 153
Query: 175 EIIDLGRESRKA-------FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
E++ LG+ + + S D K +AT +YTSGTTG PKGVML
Sbjct: 154 ELLALGKTALHKDSALVIKLNASADPAK-----------MATIIYTSGTTGAPKGVMLNQ 202
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 287
L+ + ++ D LS+LPPWH +ERA Y + E M + + L+ DL
Sbjct: 203 TGWLNALGRALEMKVITEKDTALSLLPPWHAFERAVEYGVMMAQCEFMISGINTLRQDLG 262
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
++P SVP ++E+LY+GI +++ S +R V + + A+ + I+ G+ L
Sbjct: 263 DFKPTSFPSVPRIWESLYNGIMQKLEKESPVKRNVFYFFLDVGAAWAKHEAIFNGYDL-- 320
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG--ISKAGVSGGGSLPM 405
Q +P + + A LA + V+ I A+G +SK+ SGG +LP
Sbjct: 321 -QVKPKPALQQVLDRAASGAVLAALLPLKLASQAVFAPIHQALGGNVSKSA-SGGSALPQ 378
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV-L 464
+D F AIG+KV GYG+TE+S +I+ R V G+VG P +IK+ + EV L
Sbjct: 379 VVDRFLTAIGIKVLEGYGMTETSALISLRDVQKPVSGTVGRPFPGYKIKLKNDLGAEVPL 438
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G+KG + V +Q++ GY+K P D+DG+ +TGDI + G L
Sbjct: 439 APGAKGTLWVHSNQLLLGYYKRPELNAVIFDKDGFFDTGDIMVLT----------AAGDL 488
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
+ GR+K+TI L+ GEN+EP+ +E+ L S I Q++++G D++ GAIIVP+ E+V
Sbjct: 489 MFAGRSKETIALAGGENIEPVPIEDKLLASEFIDQVMIVGDDRKTLGAIIVPNFEKV 545
>gi|294462826|gb|ADE76955.1| unknown [Picea sitchensis]
Length = 272
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 174/242 (71%), Gaps = 1/242 (0%)
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
K G++ G S+P+H+D F+EAIG+ + YGLTE + + + R CNVLG+ G P++ E+
Sbjct: 2 KIGLTAGASIPLHVDQFFEAIGITLLNAYGLTEMTSIYSGRNTECNVLGTAGLPLHGIEV 61
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
K+VD ET +L +G KG++KVRG Q+M+GY+KN AT +A+D+D WL+TGD+GW+A
Sbjct: 62 KVVDPETGAILKSGEKGLIKVRGPQLMKGYYKNIDATMKAIDKDNWLDTGDLGWLASQKP 121
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
RRCGG++V+EGRAKDTIVLSTGENVEP+E+E AAL S+LI QIVV+GQDQRR GA+
Sbjct: 122 G-GGRRCGGMMVVEGRAKDTIVLSTGENVEPIEIEAAALESNLIEQIVVVGQDQRRLGAL 180
Query: 574 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFT 633
IVP+ E + + A+ L+ S+ + L+ EL + TS+C F IGP +++E FT
Sbjct: 181 IVPNMEAIQLEARELAKSKGITSQPTVGDFKELIRRELIEHTSRCPFHIGPFVLLEEHFT 240
Query: 634 VN 635
V+
Sbjct: 241 VD 242
>gi|385809651|ref|YP_005846047.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
gi|383801699|gb|AFH48779.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
Length = 611
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 177/588 (30%), Positives = 285/588 (48%), Gaps = 64/588 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+ ++E +FA GL +GVK ++K+++ S+N W+ +D +L+ GA++V ++E
Sbjct: 45 DQFKEETDNFAFGLANLGVKRDDKVAIISENRPEWVYSDMAILSLGAVDVPLYPSLTAES 104
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP-VFS 172
+ I N+SES + V N N+ + + + FII+ K D IP +++
Sbjct: 105 VEFIINNSESKGIIVSNKFQLNKFLKIRNNCKTIEFIIIYNEK------DFDPNIPGLYT 158
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+ ++ D+G K +S + E +D+ T +YTSGTTG PKGV+LTH N+L
Sbjct: 159 FKQVQDIG----KRYSKEHPNLLKDSIEMTKPEDVCTIIYTSGTTGEPKGVVLTHNNILS 214
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
+R+ + P D FLS LP H++ER GY+ F+ G + Y ++ + DL +
Sbjct: 215 NVRAALECFPINKDDIFLSFLPLCHIFERMAGYYTAFASGGTICYAESIETVAQDLIAVK 274
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP ++E +YS I K + + ++ + I Y + K+
Sbjct: 275 PTIMTTVPRLFERIYSRIIKNVESQPEKKQKIFHWAIETGKEYASAKK------------ 322
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+ L H +A+KLV+KK++ G + +SGG +L +
Sbjct: 323 -------------KGKVSIPLAAKHKVADKLVFKKLRERTGGRLRFFISGGAALSKDLGE 369
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+EA+G+ + GYGLTESSPVIAA R G+VG P E+KI A E+L
Sbjct: 370 FFEAVGILIIEGYGLTESSPVIAANRVDDYKFGTVGKPFPGVEVKI--APDGEIL----- 422
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
+G +MQGY+KN T +A DGWL+TGDIG G L + R
Sbjct: 423 ----AKGPNIMQGYYKNKKET-EATIVDGWLHTGDIGEFDAE----------GFLKITDR 467
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K S G+ + P +E L S I Q V+IG + A+IVPD E + A
Sbjct: 468 KKHLFKTSAGKYIAPTPIENLFLASKYIDQFVLIGDRRMFLTALIVPDFEALKEYADSNK 527
Query: 590 IVHADASELSKEKTI-SLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
I + +L ++ I LL EL + + + ++ ++D+PF++
Sbjct: 528 IPYTKVDDLVRDDRIYKLLESELNQMQRQLANYERVRKFALLDKPFSI 575
>gi|322368270|ref|ZP_08042839.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
gi|320552286|gb|EFW93931.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
Length = 653
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 273/577 (47%), Gaps = 70/577 (12%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ FR + + + + A G R +GV+ ++++ +F+D W D +LA GA+
Sbjct: 67 DGEFRSISYATMRDIVRNLAAGFRDLGVEADDRIGIFADTRMEWAQTDFALLAAGAVVTT 126
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
SS ++ ++ E+ + VEN R+ E + FI+++ D
Sbjct: 127 VYRSSSVSQVEYLLGDPEATGVVVENENLLERVFEA-EDALDLEFIVVMDSLSREYDRD- 184
Query: 165 VEEIPVFSYDEIIDLGRESRKA--FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
+++ E+ D G A + DAR+ DD+AT +YTSGTTG PKG
Sbjct: 185 ----DLYTLGEVHDRGETVFDADEYESWIDAREL--------DDLATLIYTSGTTGKPKG 232
Query: 223 VMLTHKNLLHQIRSLY---------DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGI 272
V LTH N + Y ++ + K +S LP HV+ER G+F+ F+ G
Sbjct: 233 VRLTHWNFRSNVNQCYRRFGPRPDKEVPVVDQHSKTVSFLPLAHVFERTAGHFMMFAAGA 292
Query: 273 ELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ Y + L+DD + +P SVP VYE +Y I+ Q S RR+ A +
Sbjct: 293 TVAYAESPDTLQDDFRAVRPTTGTSVPRVYERIYDAIRSQADESDLKRRIFEWA-TDVGK 351
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
AY G R QK LLA+KLV+ +++ +G
Sbjct: 352 AYHEVDSPGVGL---RAQK-------------------------LLADKLVFDQVKDGLG 383
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
+ + +SGGGSL + Y +G+ + GYGLTE+SPVI+ P +G++G+P+
Sbjct: 384 GNIEFFISGGGSLSADLCALYHGMGLPILEGYGLTETSPVISVNPPEAPEIGTIGYPVVD 443
Query: 451 TEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 508
++K+ D+ E AG G + V+G V GY+ P T+QA EDGW TGDI I
Sbjct: 444 EKVKVDDSVVGEQFSDAAGEVGELLVKGPNVTDGYWNKPEETEQAFTEDGWFRTGDIVEI 503
Query: 509 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 568
P G + RAK+ +VLSTG+NV P +E+A S ++ Q +V+G ++
Sbjct: 504 RPD----------GYIAFRERAKELLVLSTGKNVAPGPIEDAFAASDIVEQCLVMGDGRK 553
Query: 569 RPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI 604
A+IVP+ EEV A R + + D EL ++ T+
Sbjct: 554 FVSALIVPNVEEVRERAAREGLSLPDDDRELCRDDTV 590
>gi|194333847|ref|YP_002015707.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
gi|194311665|gb|ACF46060.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
Length = 607
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 280/576 (48%), Gaps = 63/576 (10%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
N ++ L +++ D A L+ G++P +++++ S+N W +AD +L+ GAI+V
Sbjct: 36 NGKYEPISYDSLREDVSDLAAFLKDKGIEPGDRVAILSENRPGWYLADMAILSIGAIDVP 95
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
++ +I S S + V N +I + II++ +
Sbjct: 96 LYPSLPPNQIEYILKDSGSKVIIVSNMLQLGKIISVWQDLPELDSIIVM---------NR 146
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+EE P E+ + + +K +++ D Y+ I DDIAT +YTSGTTG PKGVM
Sbjct: 147 LEE-PEEGVIELSEAKKRGKKILAETPD---FVSYQMIKPDDIATIIYTSGTTGVPKGVM 202
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIEL-MYTAVRNL 282
LTH+N+ I+S I+ + D+ LS LP H YER GY+ +F+ G + + ++ +
Sbjct: 203 LTHRNICENIKSCSTIIRLDESDRSLSFLPLSHAYERTGGYYLLFACGAAIYLAESIETV 262
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++ +P + +VP +++ + + I KQI S ++ +I+
Sbjct: 263 SLNIAEAKPTIIFTVPRLFDRIRTNILKQIANESPVKQ-----------------KIFNW 305
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 401
C T Q S I L H +AEKLVY KI G S + VSGG
Sbjct: 306 ACSTGMQYHKSSEKGK--------ISPTLTLQHKVAEKLVYHKISQKFGGSLRFFVSGGA 357
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
+LP + F++ +G+ + G+GLTE+SPV RP G+VG +N+ EI I
Sbjct: 358 ALPQKVGEFFQGLGITILEGFGLTETSPVTNVNRPENVKFGTVGPVVNNVEISI------ 411
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
S G + RG +M+GY+ + +ATK+ + DGW +TGDIG +
Sbjct: 412 -----ASDGEILFRGPSIMKGYWNDEAATKEVI-YDGWFHTGDIGELDED---------- 455
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
G L + R K IV S G+N+ PL +E S + Q++V+G+ + A+IVP+ E+
Sbjct: 456 GYLRITDRKKHIIVTSGGKNIAPLPIEHLIAESPYVDQVMVVGEKRPFLTALIVPNYNEL 515
Query: 582 LMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 617
A+ I A SEL K+K I+ L+ L + S+
Sbjct: 516 KNYAEENDISSASGSELLKDKQINKLFENLLRTVSR 551
>gi|333370495|ref|ZP_08462494.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
gi|332977723|gb|EGK14486.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
Length = 611
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 289/574 (50%), Gaps = 60/574 (10%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R ++ +++ + A GL +GV +K+++ S+N+ W V D + + A++V
Sbjct: 32 YRSITYREMWEQVRETAAGLAHLGVGHGDKVAILSNNNPMWPVTDLAVASLAAVSVPIYP 91
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
++ + +I +++ VE + +I T A + I++ AP E
Sbjct: 92 TLTAAQTGYILKNADCRTAVVEEDDQLRKIRST---DAEVSHHIVM-----KPAPGFSEG 143
Query: 168 IPVFSYDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
V S+D + GRE RK + D ++ IG D + T ++TSGTTG PKG MLT
Sbjct: 144 EGVLSFDSLRKAGREHPRKDWEDG--------WKNIGGDQLFTIIHTSGTTGPPKGAMLT 195
Query: 227 HKNLLHQIRSL-YDIVPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELMYT-AVRNLK 283
H+NLL + + IV GD LS LP HV+ER G F+ R G + Y ++ ++
Sbjct: 196 HRNLLANTEGVQFWIVELVPGDVCLSYLPLSHVFERMAGQFVPLREGATIAYAESIDTIQ 255
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
++L +P M +VP + E +Y+ +Q+QI ++S +R + ++A R YEGF
Sbjct: 256 ENLLEVRPTVMTTVPRLLEKIYAKVQEQIASASPLKRKI------FNWAVDVGHRRYEGF 309
Query: 344 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGS 402
R + L+ L I + L LA++LV++KI+ +G G VSG
Sbjct: 310 IDAR--------MDLL--LKGEAIPSDLRRQFALADRLVFRKIKERVGGRLRGLVSGAAP 359
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
L I F+ +I + V GYGLTE+SPVIAA + +G+VG P+ + E+KI
Sbjct: 360 LNQEIARFFWSIDIPVLEGYGLTEASPVIAANPMMRSKIGTVGKPLPNLEVKI------- 412
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
G+ G + RG +MQGY+KN AT++AL DGWL+TGD+G P G
Sbjct: 413 ----GTDGEILARGPSIMQGYYKNEEATREAL-RDGWLHTGDLGEWDPD----------G 457
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
L + R K+ IVLSTG+NV P +E S I Q V+IG ++ A++VPD E +L
Sbjct: 458 FLRVVDRKKNLIVLSTGKNVAPQPVENHITNSPYISQAVLIGNGRKYVIALVVPDYENLL 517
Query: 583 MAAKRLSIVHADASELSKEKTI-SLLYGELRKWT 615
A + D L++ + L E+ K T
Sbjct: 518 PWAGKRGFPEQDPENLAEHPEVKKFLKEEVEKHT 551
>gi|359689869|ref|ZP_09259870.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748860|ref|ZP_13305152.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418757738|ref|ZP_13313925.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115515|gb|EIE01773.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275929|gb|EJZ43243.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 642
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 249/513 (48%), Gaps = 26/513 (5%)
Query: 76 EKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFN 135
+K+ LF DN W + ++ +G +V RG +S +E+ +I +H+ES +E +
Sbjct: 61 DKVGLFCDNRTEWALCSFSVMCSGGADVPRGCDASEDEIFYILDHTESKITFIEKEQVLV 120
Query: 136 RIAETLCSKAAMRFIILLWGKK--SSVAPDIVEEIPVFSYDEIIDLG---RESRKAFSDS 190
++ L + +IL+ ++ SS+A V + E IDL + R
Sbjct: 121 KLGNILNKLKHLETVILIEPEENFSSLAKLKVS----YPKIEFIDLETAISQGRAWVEKK 176
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 250
+ H E++ +DIAT +YTSGTTG PKGV+L H++ I L VPA D+ +
Sbjct: 177 GKSLLHSVGESLTENDIATIIYTSGTTGVPKGVVLKHRSFTWTINQLQQFVPANYSDRVV 236
Query: 251 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 310
LPPWH+ ER + S G L + V L D + +P ++SVP V+E LY I
Sbjct: 237 VFLPPWHIAERILETALLSWGASLACSNVSQLTRDFEIIKPTVLVSVPRVWEALYRRIWD 296
Query: 311 QIFTSSAARRVVARALIRISFAYTA-FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
++ SS + + + +RI+ Y + + + T N + L D + + ++
Sbjct: 297 KVSKSSPTKLAIFKTAVRIAETYNSLLDTVIGNYSETENSNKEE---KLTDTVVSVLLLP 353
Query: 370 ILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
+ + L++LA+K++ G K G G++P I F+ ++GV + YG+TE++
Sbjct: 354 LFYFLNILAQKVLAPVRALFGGQLKFAFCGAGAMPPKIQFFFRSMGVPIIETYGMTETTG 413
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 489
+ A GS+G IK+V + V G KGI +G V GY+KN
Sbjct: 414 MGALGSFPIPKTGSIGQVFPGAHIKLVGEQNEVVSKPGDKGIAWHKGPHVTAGYYKNEEL 473
Query: 490 TKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
T+ DGW N+GD+ W G L GRAKDTIVLS+GENVEP +E
Sbjct: 474 TRSNF-VDGWFNSGDLFVWTKT-----------GELKFAGRAKDTIVLSSGENVEPEPIE 521
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
L + +VIGQDQ+ +IVPD +V
Sbjct: 522 GKILETGWALTAIVIGQDQKFLAVLIVPDFAKV 554
>gi|183219534|ref|YP_001837530.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909676|ref|YP_001961231.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774352|gb|ABZ92653.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777956|gb|ABZ96254.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 641
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 284/581 (48%), Gaps = 53/581 (9%)
Query: 76 EKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFN 135
+++ + +D +WL + + G ++V RG+ ++ +++ +I NH+ + +EN + N
Sbjct: 65 DRIGIIADVGHQWLQVSMAITSIGCVDVPRGTDATQDDIGYILNHANCKIVFIENEKALN 124
Query: 136 RIAETLCSKAAMRFIILLWGKKSSVAPDIVE-EIPVFSYDEIIDLGRESRKAFSDS-NDA 193
+ L K ++ IIL K PD +E + P+ ++ ++ K +S D
Sbjct: 125 KFLPEL-RKLNLQIIILFGESK----PDSMEIQCPIINFTDL--------KIYSQEIEDK 171
Query: 194 RKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDK 248
E I +D+AT +YTSGTTG PKGVMLTH ++L +I++L V GD
Sbjct: 172 TYQEIGEEIQEEDLATIIYTSGTTGKPKGVMLTHGSILFEIQALVSEFRKTGVKVGEGDV 231
Query: 249 FLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 308
L LPPWH ER F GI++ +T+V L DL + +P + +VP V+E+ Y I
Sbjct: 232 TLGFLPPWHSGERIFETICFYSGIKIAFTSVPELGKDLAKAKPTILFTVPRVWESFYDKI 291
Query: 309 QKQIFTSSAARRVVARALI--RISFAYT---AFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ I S ++ + L+ + F+ T AF RI P I ++
Sbjct: 292 KDTIQKSHWIKKYFLKLLVWNSVQFSITYDKAFDRIPRLIT-------PKTFSLYILQIF 344
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 422
I I PL L K V KI S +G + +G G+L +D F AIG+ + Y
Sbjct: 345 NCIKLMIYLPL-LPISKFVLSKILSVLGGRLRYAFAGAGALQAEVDRFMYAIGMPILEVY 403
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE+S V R +G+VG PI IK++D E+ G KG+ G M+G
Sbjct: 404 GMTENSGVSTIRHYNDFSVGNVGKPIQGVTIKLIDEFGKEIRKPGIKGVALHHGRHNMKG 463
Query: 483 YFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 541
Y+ TK L +D WLN+GD + W G L GRAKDTIVLS GEN
Sbjct: 464 YYLEEEKTKAVLTDDRWLNSGDLLVWTTQ-----------GNLKFAGRAKDTIVLSGGEN 512
Query: 542 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 601
VEP +E +S I Q VV+GQD++ A+I+ + E+V K SI + + +E
Sbjct: 513 VEPEPIEICLKQSDYIDQAVVVGQDKKTLSALIILNLEKVETYLKEQSINMNLKNSIYQE 572
Query: 602 KTI--SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTVN 635
I L+ E++ + S K F+ I ++++ PF V+
Sbjct: 573 VEIIQKLIRNEVKHFVSDKNGFKSFERISNVYILQNPFVVH 613
>gi|108804880|ref|YP_644817.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766123|gb|ABG05005.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 592
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 265/534 (49%), Gaps = 67/534 (12%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
R+ +L + DFA GL +GV +++ L + N W V D + + GA V
Sbjct: 38 RWEAVSYGELYGMVRDFAAGLAGLGVGRGDRVGLIARNRVEWAVTDFAVQSLGAATVPVY 97
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
E++ HI E+ + VE+ E R++ A+ ++++ G+ +++
Sbjct: 98 PTLEPEQMAHILADCEARVVVVEDGELLGRVSSARGELPALEHVVVMEGEGATL------ 151
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
++E++ GRE + + + ++G +D+AT +YTSGTTG PKG +LT
Sbjct: 152 ------FEEVLREGRE--RPLEGWEEG-----WRSLGREDVATIIYTSGTTGRPKGAVLT 198
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKD 284
H N+L + + D + D FLS LP HV+ER CG F+ G + Y +V + +
Sbjct: 199 HGNILSNLEGIQDALTVYPEDVFLSFLPLSHVFERTCGQFLALGVGASVYYAESVEKVPE 258
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
+L+ +P M SVP +YE ++ ++ + S +R + A A +R YE
Sbjct: 259 NLREVRPTVMPSVPRLYEKMHDRVRAMVAGGSPVKRWL------FGRAVAAGRRRYE--V 310
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
L R + L R A+ ++LV+++++ A+G + VSGG L
Sbjct: 311 LDRGGRP---------GLPLRAALAVY-------DRLVFRRLREAVGGRVRFFVSGGAKL 354
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ F+ A G+K+ GYGLTE+SPVIA R G+VG P+++ E++I
Sbjct: 355 DTEVGKFFYAAGIKIMEGYGLTETSPVIACNRLEKPRFGTVGLPLSNLEVRI-------- 406
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
+G ++VRG VM+GYF++ +T++A +DG+ TGDIG G
Sbjct: 407 ---SPEGEIQVRGPSVMRGYFRDERSTEEAFTQDGFFRTGDIGSFDED----------GY 453
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
L + R K IVLSTG+NV P +E A + + I Q VV+G+ ++ A++VPD
Sbjct: 454 LTVTDRLKSLIVLSTGKNVAPQPIESALVTAPHISQAVVVGEGRKYVSALVVPD 507
>gi|374586879|ref|ZP_09659971.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875740|gb|EHQ07734.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 656
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 268/557 (48%), Gaps = 55/557 (9%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G+ + + L DN W + G+ G ++V RG ++ +++L I NH+E L VE
Sbjct: 55 LGLDHGDAVGLLCDNRYEWNLISLGLSTIGCVDVPRGCDATEQDILFILNHTECSVLIVE 114
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKS------------------SVAPDIVEEIPVF 171
N + ++IA+ + +R I+ + G K S APD+ V
Sbjct: 115 NEKMLSKIADLIGELPHIRHILCIEGPKGFRNDRWELRFAEERSVKHSKAPDVKLHFLVD 174
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
+ D+ L R+ + F RK + I DD+AT +YTSGTTG PKGVMLTH+N
Sbjct: 175 ALDKGHALIRKHGEEF-----LRK--RGLAIRPDDLATIIYTSGTTGTPKGVMLTHRNFC 227
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 291
++ + P D+ + LPPWH+ ER + + G + +++ +L DLQ +P
Sbjct: 228 WEVAQVQLSTPLNEKDRAVIFLPPWHIAERVLELTLIACGASMANSSILHLAGDLQTIRP 287
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS-FAYTAFKRIYEGFCLTRNQK 350
++SVP V+E LY I + ++ + + ++ A +++ L +
Sbjct: 288 TLLVSVPRVWEQLYKRIMDGVRKQPEEKQKIFHMAVNVAGLHMDALDNLFDRIALIEEET 347
Query: 351 QPSYLVALIDWLWARIICAIL----WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
W+ I A+L W L+L A+ +V KK++ G +SG G+LP
Sbjct: 348 PAQ------TWIRKGISVAVLLVTFW-LNLPAQ-IVLKKVKDIFGGRLNYAISGAGALPG 399
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
HI F+ ++ + + YG+TE++ V R VG P+ I++ D +
Sbjct: 400 HIADFFRSVYIPIVDAYGMTETTAVSVMGRLPWPRRACVGPPLPGVHIQLRDEYGRIITR 459
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI-GWIAPHHSRGRSRRCGGVL 524
G +G+ +G +M+GY++ T + L +DGWLN+GD+ W G +
Sbjct: 460 PGERGVAWHKGPHIMKGYYRAQDKTDEVL-QDGWLNSGDLFAWTTT-----------GEI 507
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
GRAKDTIVL+ GENVEP +E S I Q+VV+GQD++ A+IVP K+ V
Sbjct: 508 RFTGRAKDTIVLAGGENVEPGPIELRLAASPYIAQVVVVGQDRKSLAALIVPHKDRV--- 564
Query: 585 AKRLSIVHADASELSKE 601
A+ L+ V A E E
Sbjct: 565 AEELTKVGHTAPEAMTE 581
>gi|110597451|ref|ZP_01385738.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
gi|110340995|gb|EAT59466.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
Length = 610
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 173/605 (28%), Positives = 301/605 (49%), Gaps = 66/605 (10%)
Query: 37 TRIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGM 95
++ I+R+ N + + E+++ F+ L+ G+ P++++++ S+N W +AD +
Sbjct: 27 SKFPIARKVNGVYEPISYREFEEDVHHFSAFLKNNGISPKDRVAILSENRPGWYLADMAI 86
Query: 96 LATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG 155
L GAI+V ++ +I N+ + A+ V N +I + + +I++
Sbjct: 87 LNIGAIDVPLYPSLPPNQIEYILNNCSAKAVVVSNMLQLGKIISIWQNLPELCLVIVM-- 144
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
+ +EE + +++IDL + + + + + DD+AT +YTSG
Sbjct: 145 -------NRLEE----NVEDVIDLNQAKEEGKRVLEEKPWFLEAAPVEPDDVATIIYTSG 193
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL 274
TTG PKGVMLTH+NL I+S I+ + D LS LP H YER GY++ FS G +
Sbjct: 194 TTGLPKGVMLTHRNLCENIKSCSSIIRLDESDCGLSFLPLSHAYERTGGYYLLFSCGASI 253
Query: 275 -MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 333
+ ++ + ++ +P + +VP +++ + I KQI + +A ++ + ++
Sbjct: 254 YLAESIETISMNMAEARPTIIFTVPRLFDRIKMSIIKQISSQNAIKQKIFYWAVQTG--- 310
Query: 334 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS 393
E + N+K + A+L H LAEKLVY+KI+ G
Sbjct: 311 -------EKYHRQLNEKGR--------------VTALLSLQHTLAEKLVYEKIKHKFGGR 349
Query: 394 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 452
+ VSGG +LP I F++A+ + + G+GLTE+SPV RP G+VG +N+
Sbjct: 350 LRYFVSGGAALPQKIGEFFQALEISILEGFGLTETSPVTHVNRPEKIKYGTVGPAVNNVT 409
Query: 453 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
+KI AE E+L ++G +M+GY+K+ AT++ + DGW TGDIG I
Sbjct: 410 VKI--AEDGEIL---------LKGPNIMKGYWKDEEATREVI-RDGWFCTGDIGEIDKD- 456
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
G L + R K IV S G+N+ PL +E S + Q++VIG+ + A
Sbjct: 457 ---------GYLKITDRKKHIIVTSGGKNIAPLPIENLISESPFVDQVIVIGEKRPFLIA 507
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVD 629
+IVPD E+++ A I A EL + K++ +Y +L + S+ ++ ++D
Sbjct: 508 LIVPDFEKLMEYASSEGIQAATNKELIESKSVIQIYDKLMRTISRQLATHEKVRKFLLID 567
Query: 630 EPFTV 634
+ FTV
Sbjct: 568 DAFTV 572
>gi|189500240|ref|YP_001959710.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
gi|189495681|gb|ACE04229.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
Length = 609
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 175/601 (29%), Positives = 289/601 (48%), Gaps = 67/601 (11%)
Query: 41 ISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
+SR+ N + L ++ A L+ G++ +++++ S+N W +AD +L G
Sbjct: 31 VSRKVNGVYEPISYDSLSDDVSSLAAFLKHKGIEAGDRVAILSENRPGWYLADMAILTIG 90
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
AI+V S ++ +I S S A+ V N +I + + F+++L +
Sbjct: 91 AIDVPLYPSLPSNQIEYILKDSGSKAIVVSNMLQLGKILSIWQNLTDLEFLVVLNRLDET 150
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
V E+ + + R+ +S D + Y I DD AT +YTSGTTG
Sbjct: 151 VE----------GATELSEAKKAGREILENSPD---YVSYTMIKPDDTATIIYTSGTTGL 197
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIEL-MYT 277
PKGVMLTH+N+ ++S I+ + D+ LS LP H YER GY+ +F+ G + +
Sbjct: 198 PKGVMLTHRNICENVKSCSSILRIDETDRSLSFLPLSHAYERTGGYYLLFACGARIYLAE 257
Query: 278 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
++ + ++ +P + +VP +++ + + I KQI T S ++ + Y K
Sbjct: 258 SIETVSLNIAEAKPTIIFTVPRLFDRIRTNILKQIKTQSPTKQKIFDWARATGIEYQ--K 315
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
++ EG +PS ++AL H +A+KLVY KIQ G + +
Sbjct: 316 QLQEG--------KPSMILAL---------------KHGIADKLVYTKIQERFGGNLRYF 352
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
VSGG +LP I F++A G+ + GYGLTE+SPV RP G+VG +++ +KI
Sbjct: 353 VSGGAALPRKIGEFFQAFGITILEGYGLTETSPVTNVNRPEKVKFGTVGPVLDNVTLKI- 411
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
S G V RG +M+GY+ + SAT + + DGW +TGDIG +
Sbjct: 412 ----------ASDGEVLFRGPNIMKGYWNDESATGEVI-HDGWFHTGDIGELDED----- 455
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
G L + R K IV S G+N+ PL +EE +S + Q++VIG+ + A+IVP
Sbjct: 456 -----GYLKITDRKKHIIVTSGGKNIAPLPIEELIAENSYVDQVMVIGEKRPFLVALIVP 510
Query: 577 DKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFT 633
E++ A I L + K I +Y L + S+ ++ ++ EPF+
Sbjct: 511 VFSELVSFADEQQITSKTRESLLENKEILKIYESLLRTISRQLATHEKVRKFILIQEPFS 570
Query: 634 V 634
+
Sbjct: 571 I 571
>gi|313672314|ref|YP_004050425.1| amp-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939070|gb|ADR18262.1| AMP-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 606
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 273/559 (48%), Gaps = 69/559 (12%)
Query: 60 ILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
+L A GL+ IGVK +++++ S+N W++ D + GAI V ++ E + +I N
Sbjct: 47 VLMMARGLKKIGVKKGDRVAILSENRPGWIITDMAIQICGAITVPIYPTNTPETIEYILN 106
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI--- 176
+SES A+ + N F++I ++ ++ S A +PVF++ +I
Sbjct: 107 NSESKAVFISNKVQFDKIYSIRDKIPSVEYVFSFDRFMSDKA------LPVFTFLQISEI 160
Query: 177 -IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI- 234
I L E +++ + +D+AT +YTSGTTG PKGVMLTH+NL+ +I
Sbjct: 161 SIPLNDEEKRSIESG--------ISEVKPEDVATIIYTSGTTGFPKGVMLTHRNLMSEIF 212
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPH 292
I + + FLS LP HV ER+ GY+I G E+++ + + ++ P
Sbjct: 213 LGTKKIEIMTDKEVFLSFLPLSHVLERSVGYYIPVYNGCEIVFAENIDKVAQNILEVNPT 272
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
MISVP ++E +YS I + + + + ++ + I Y K YE +K
Sbjct: 273 MMISVPRLFEKIYSRIYENVHSMPSFKKSLFHKAIEFGRWYVHKK--YE-------EKNV 323
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFY 411
L L + +KL++ KI+ G G VSGG L +I+ F+
Sbjct: 324 DTLSEL---------------KYKFYDKLIFSKIRERFGNRFKGFVSGGAPLDKNINEFF 368
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
AIG+ V GYGLTE+SP I P+ +GSVG P TE KI AE E+L
Sbjct: 369 WAIGIPVYEGYGLTETSPGICINCPSHVRIGSVGTPFEETEFKI--AEDGEIL------- 419
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG VM+GY+KN TK+A + D W TGDIG I R G + +++ R K
Sbjct: 420 --VRGPMVMKGYYKNEETTKEAFEGD-WFKTGDIGEI----------RDGYIYIVD-RKK 465
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ IV S G+N+ P +E I Q V G + A++VP+ E +L AK I
Sbjct: 466 ELIVTSGGKNISPQHIENELKLDKYISQAYVHGDRKPYLVALLVPNMERLLEFAKEKGID 525
Query: 592 HADASELSKEKTISLLYGE 610
+ D S+L+K + LY E
Sbjct: 526 YLDISDLAKNPEVIKLYNE 544
>gi|456983873|gb|EMG20065.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 485
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 233/465 (50%), Gaps = 68/465 (14%)
Query: 227 HKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD 284
H N++HQ+ + ++ E D LS+LP WH++ER Y S GI+ YT V +L++
Sbjct: 2 HSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRN 61
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYE 341
DL + +P +M P V+E++Y+ I ++ + RRV+ + S Y A +R
Sbjct: 62 DLAKAKPSFMAFAPRVWESVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLN 121
Query: 342 GFCLTRNQKQ----------------------------------PSYLVALIDWLWARII 367
G + + P Y + L +WL+ ++
Sbjct: 122 GLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLV 181
Query: 368 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
L + +V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE
Sbjct: 182 GLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTE 241
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVR 475
+SPVI+ R ++GSVG + +E+ I D N EVL G KGIV V+
Sbjct: 242 TSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVK 301
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G QVM+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+V
Sbjct: 302 GPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVV 350
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
L GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E + + K I +
Sbjct: 351 LLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKI 410
Query: 596 SELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 634
E+ K K I E+R + S K F Q+ + + +PF V
Sbjct: 411 DEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFEV 455
>gi|193215784|ref|YP_001996983.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
gi|193089261|gb|ACF14536.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
Length = 607
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 279/585 (47%), Gaps = 66/585 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
+ + + A L+ IG++ +++++ S+N W++ D L GAINV + + +L
Sbjct: 47 IANHVYELAAYLKAIGIQKGDRVAILSENRIEWVITDMATLKIGAINVPLYPSTPANQLA 106
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I S + A+ N+I ++ +I S+ P +E ++
Sbjct: 107 YILQDSGAKAIVTSTQLQTNKIRRVKNELPELKTLI-------SINPLEAKEDGECNFSA 159
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
+ G K D K TI DDIAT +YTSGTTGNPKGVMLTH+N+ I+
Sbjct: 160 ALKTGEAKLKNDPD------FLKTITISEDDIATLIYTSGTTGNPKGVMLTHRNICENIK 213
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHY 293
S I+P D LS LP H YER GY++ F+ GI++ Y ++ + ++ +P
Sbjct: 214 SCSAILPLSEDDACLSFLPLSHAYERTVGYYLMFACGIKIYYAESIETISLNISEVRPTV 273
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+I+VP ++E + S I K + + R+ + + + + + A +R +Q
Sbjct: 274 VITVPRLFERIKSSILKNVDNGAEVRKKLFYWALHLGYQHHADQRSGRSNFFVESQ---- 329
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+ LA L+ K+I+ G + VSGG +LP LF+E
Sbjct: 330 ---------------------YALANLLILKQIRERFGGRLRFFVSGGAALPPDTGLFFE 368
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
A+G+ + G+GLTE++PV RP G+VG + + E+KI D G +
Sbjct: 369 ALGITILEGFGLTETAPVTHVNRPGKVKFGTVGTLLKNVEVKIAD-----------DGEI 417
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+RG +M+GY+++ +AT + + +GW +TGDIG I G L + R K
Sbjct: 418 LLRGPNIMKGYWQDDAATAEVI-RNGWFHTGDIGEIDSE----------GYLKITDRKKH 466
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
IV S G+N+ PL +E + I Q +V+G+ + A+IVP+ E + AK+ + +
Sbjct: 467 IIVNSGGKNIAPLPIENRIHANKYIDQALVVGEKRPFLIALIVPNFENLEALAKQKGLAY 526
Query: 593 ADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 634
++ EL I LY + + S+ ++ ++ EPFT+
Sbjct: 527 SNFEELISHHEIYQLYTNILRDISRELASHERVRKFLLLSEPFTI 571
>gi|345302941|ref|YP_004824843.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345112174|gb|AEN73006.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 632
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 261/531 (49%), Gaps = 69/531 (12%)
Query: 62 DFAE-------GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
DFAE GL +G++ ++ + ++ + +AD L G I+V + E +
Sbjct: 54 DFAEQAEALALGLHAMGLERGAHVAFYMESDAYFCLADMACLIGGLIDVPIYLTHAPESI 113
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++ H+E+ AL V N R+A L +RF+++ + + D VE P++++
Sbjct: 114 HYVIEHAEARALVVSNRALLERVASLLRDLPGVRFVVV--ADATGLDTDRVEGRPLYTFA 171
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---- 230
++++ GR+ R A ++ AR + I D+AT +YTSGTTG PKGVML+H+N+
Sbjct: 172 QLLEAGRQRRAADPEAI-ARLRAQ---IRPGDLATIIYTSGTTGRPKGVMLSHENISFNA 227
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
L + P +G+ LS LP HV+ R Y + +T L+D L++ +
Sbjct: 228 LTSFSGIKQYRPGPDGEVALSFLPLTHVFARTLFYGYLYYATSVYFTTPDALRDALRQVR 287
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P +VP V E +Y + ++ T + + R + ++ R YE L R +
Sbjct: 288 PTTFATVPRVLEKIYGALVERAATMPGLKGRIFRWALDLA-------RRYE---LGREPR 337
Query: 351 QPSYLVALIDWLWARIICAILWPLHL-LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHID 408
L+ L L +A++LVY+K + A+G A + +GG +L +
Sbjct: 338 G-------------------LYRLQLAVADRLVYRKWREALGGRIAFIIAGGAALSAELA 378
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
+ A G+ + GYGLTE+SPVI RP N G+VG PI E+KI AE E+L
Sbjct: 379 NIFAAAGIPILQGYGLTETSPVITYNRPELNRAGTVGVPIPGVEVKI--AEDGEIL---- 432
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
RG VM GY+K+P T++ +DE+GW +TGDIG+ G LV+
Sbjct: 433 -----TRGPHVMLGYYKDPERTREVIDEEGWFHTGDIGYFTEE----------GFLVITD 477
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
R KD LSTG+ V P LE+ L+ Q +V+G + A+I PD+E
Sbjct: 478 RKKDLFKLSTGKYVMPQPLEQRLTADPLVEQALVVGPGYKFTAALIFPDEE 528
>gi|291279849|ref|YP_003496684.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
gi|290754551|dbj|BAI80928.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
Length = 610
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 170/584 (29%), Positives = 281/584 (48%), Gaps = 77/584 (13%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GLR +G+KP +++++ S+N W++AD G+L+ GA+ V + ++ E++ ++ NHSES
Sbjct: 50 ARGLRKLGIKPGDRVAILSENRPGWVIADMGILSAGAVTVPIYATNTPEQVKYVLNHSES 109
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFII---LLWGKKSSVAPDIVEEIPVFSYDEIIDLG 180
+ + N ++++ + + II G K + PV ++ ++ ++
Sbjct: 110 RVVFISNKVQYDKLVQIKDEIPHVEHIISFDRFLGTK---------DFPVNTHLQLAEIS 160
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSL 237
+D I DD+AT +YTSGTTG PKGVMLTH N + +I
Sbjct: 161 V----PLTDDEKNEIEEIIAKIEPDDLATLIYTSGTTGVPKGVMLTHYNFVSEIILGTKK 216
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMI 295
+++ E DKFLS LP H ERA GY+I G ++++ ++ + +++ +P +M+
Sbjct: 217 VEVLKPE--DKFLSFLPLSHALERAVGYYIPIYNGCQMVFAESIDKVPENMVEVKPTWMV 274
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
SVP ++E +YS I + + S ++ + + + Y K I + N S+
Sbjct: 275 SVPRLFEKMYSRIYENVHAMSGFKKSLFHKAVEVGKKYVEKKYIKK-----ENPGMLSFK 329
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAI 414
A D KL++ KI+ G + G VSGG L +I+ F+ I
Sbjct: 330 YAFFD-------------------KLIFSKIRERFGGNIQGFVSGGAPLDKNINEFFWVI 370
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ + GYGLTE+SP + GSVG HT K+ E E+L +
Sbjct: 371 GMPIFEGYGLTETSPGVCINTFKQVRFGSVGTMFEHTYAKL--DEDGELL---------L 419
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G +M+GY+KN ATK+ALDE+GW TGDIG I G L + R K+ I
Sbjct: 420 KGPMIMKGYYKNEEATKEALDEEGWFRTGDIGKIDED----------GFLYIVDRKKELI 469
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
+ + G+N+ P +E I Q V G + A++VP+ E ++ AK I + D
Sbjct: 470 ITAGGKNIAPQPIENELKLDKYISQAFVYGDRKPYLVALLVPNFERIVEYAKEHHIEYFD 529
Query: 595 ASELSKEKTISLLYGE--------LRKWTSKCSFQIGPIHVVDE 630
++L + I L+ E L K+ + F + P+ E
Sbjct: 530 MNDLVANEKILKLFKERVEEINKKLPKYETIKKFSLVPVDFTIE 573
>gi|374852591|dbj|BAL55521.1| long-chain acyl-CoA synthetase [uncultured Acidobacteria bacterium]
Length = 555
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 266/551 (48%), Gaps = 59/551 (10%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G GV+P + ++L S+N W ++D +LA GA++V + + ++ HI S
Sbjct: 4 LAFGFYANGVRPGDHVALLSENRPEWTLSDLALLALGAVDVPIHATQAPPQVAHILRDSG 63
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ L + E + R+ + L ++ II ++A +P + ++ + G+
Sbjct: 64 ARILVLSTGEQWQRLRDVLAGVESVEKIITF----EAIADGDARLLP---FSQLFEAGQR 116
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
D D + + D+AT +YTSGTTG PKGVMLTH N+ + + ++
Sbjct: 117 WAAHEPDLYDRLRR----AVRPSDLATLLYTSGTTGEPKGVMLTHGNITSNVTAAMRVLG 172
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVY 301
+ D LS+LP H +ER Y G+ + Y + + ++L+ +P ++ VP ++
Sbjct: 173 YSSRDVVLSILPLSHSFERMAFYCYLHAGLSIAYAESFDKVAENLRDIRPTVLVGVPRLF 232
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E + + +I +S A + R L +++ A +R C R +++ L + W
Sbjct: 233 EKM----RARILEASRALPGLKRHL--VAWGLRAGER-----C-ERARRRGDALSPWLRW 280
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQ 419
H +AE+ V +I+ IG+ +A +SGG +L + F+ +G+++
Sbjct: 281 ------------QHAVAERTVLARIREHIGLDRARSLISGGAALSPDVAYFFLGLGLEIL 328
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+SPV+ P N +G+VG PI E+KI AE E+L VRG V
Sbjct: 329 QGYGLTETSPVVTVNPPGANKIGTVGRPIPGVEVKI--AEDGEIL---------VRGPNV 377
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GY+ P T A EDGWL TGD+G++ G LV+ R KD + S G
Sbjct: 378 MLGYYNRPEETAAAFTEDGWLRTGDVGFLD----------ADGYLVITDRKKDLMKTSGG 427
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + S LI Q VV+G ++ P A+IVP+ E + A I +A +L
Sbjct: 428 KYVAPQALENRLVASPLIAQAVVVGDGRKFPAALIVPNFEALRRYAAAQGIPFREAHQLC 487
Query: 600 KEKTISLLYGE 610
I LY E
Sbjct: 488 AHPKIRRLYEE 498
>gi|373459375|ref|ZP_09551142.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371721039|gb|EHO42810.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 597
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 261/534 (48%), Gaps = 69/534 (12%)
Query: 58 QEILDFAE----GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+E +D+AE GL +GVK ++++++ S+N W +AD ++ GA+ V S +
Sbjct: 37 KEAVDWAEKLAAGLAALGVKKDDRVAIISNNRIEWALADYATMSLGAMLVPVYPSLLSHQ 96
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCS-KAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+ +I N E+ L E+ ++ E K F + AP+ +EE P
Sbjct: 97 VKYIVNDCEARVLLAEDELQVEKVKEIQSELKTVKNFFVF-------DAPEKLEE-PWKK 148
Query: 173 YDEIIDLGRE--SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
+ ++G E +K +++ +K + DD AT +YTSGTTG PKG +LTH N
Sbjct: 149 LSALAEMGEEFLQKKPTHIADEIKK------VKRDDWATIIYTSGTTGEPKGAVLTHGNF 202
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFS-RGIELMYT-AVRNLKDDLQR 288
L I + +V D FLS LP H++ER G+F+ + +G + Y ++ + D++Q
Sbjct: 203 LSNIEGILGVVDLYAEDIFLSFLPLSHIFERLAGHFLSNHQGSTVAYAESIDTVADNMQE 262
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P M+SVP +YE +Y+ + + + +R +I + R Y + + N
Sbjct: 263 IKPTVMVSVPRLYEKIYARVLENVEMGPPLKR-------KIFYWALGVGREYVNYVM--N 313
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+K +L L + LA KLV+ K+Q +G + VSGG L I
Sbjct: 314 KKPLPFL---------------LKKKYNLANKLVFHKLQERVGGRIRFFVSGGAPLSAEI 358
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
F+ A G+ + GYGLTE+SPVI P G VG P+ + E+KI E E+L
Sbjct: 359 AEFFTAAGLIILEGYGLTETSPVITVNLPDNFKFGYVGPPLPNVEVKI--DEDGEIL--- 413
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
RG VM GYFK ATK+ +D++GW +TGDIG I G L +
Sbjct: 414 ------TRGPHVMVGYFKKEDATKEVIDDEGWFHTGDIGLIDED----------GFLKIT 457
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
R K+ IV S G+N+ P +E + + I Q VVIG ++ AIIVP E V
Sbjct: 458 DRKKNIIVTSGGKNIAPQPIENMLVTTQYIEQAVVIGDKRKFCTAIIVPAFEAV 511
>gi|268317263|ref|YP_003290982.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262334797|gb|ACY48594.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 630
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 260/531 (48%), Gaps = 69/531 (12%)
Query: 62 DFAE-------GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
DFAE GL +G++ ++ + ++ + +AD L G I+V + E +
Sbjct: 54 DFAEQAEALALGLHAMGLERGAHVAFYMESDAHFCLADMACLIGGLIDVPIYLTHAPESI 113
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++ H+E+ AL V N R+A L ++F+++ + + D VE P++++
Sbjct: 114 HYVIEHAEARALVVSNRALLERVAPLLRDLPGVQFVVV--ADATGLDTDRVEGRPLYTFA 171
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---- 230
++++ GR+ R A ++ AR + I D+AT +YTSGTTG PKGVML+H+N+
Sbjct: 172 QLLEAGRQRRAADPEAI-ARLRAQ---IRPGDLATIIYTSGTTGRPKGVMLSHENISFNA 227
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 290
L + P +G+ LS LP HV+ R Y + +T L+D L++ +
Sbjct: 228 LTSFSGIKQYRPGPDGEVALSFLPLTHVFARTLFYGYLYYATSVYFTTPDALRDALRQVR 287
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P +VP V E +Y + ++ + + R + ++ R YE L R +
Sbjct: 288 PTTFATVPRVLEKIYGALVERAAAMPGLKGRIFRWALDLA-------RRYE---LGREPR 337
Query: 351 QPSYLVALIDWLWARIICAILWPLHL-LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHID 408
L+ L L +A++LVY+K + A+G A + +GG +L +
Sbjct: 338 G-------------------LYRLQLAVADRLVYRKWREAMGGRIAFIIAGGAALSAELA 378
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
+ A G+ + GYGLTE+SPVI RP N G+VG PI E+KI AE E+L
Sbjct: 379 NIFAAAGIPILQGYGLTETSPVITYNRPELNRAGTVGVPIPGVEVKI--AEDGEIL---- 432
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
RG VM GY+K+P T++ +DE+GW +TGDIG+ G LV+
Sbjct: 433 -----TRGPHVMLGYYKDPERTREVIDEEGWFHTGDIGYFTEE----------GFLVITD 477
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
R KD LSTG+ V P LE+ L+ Q +V+G + A+I PD+E
Sbjct: 478 RKKDLFKLSTGKYVMPQPLEQRLTADPLVEQALVVGPGYKFTAALIFPDEE 528
>gi|194336560|ref|YP_002018354.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309037|gb|ACF43737.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 610
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 169/569 (29%), Positives = 288/569 (50%), Gaps = 66/569 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S E+++ FA L+ G+K +E++++ S+N W ++D +L GAINV + +
Sbjct: 45 SAFEKDVNSFAAFLKQNGIKAKERVAILSENRPGWYLSDMAILNIGAINVPLYPSLPANQ 104
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I ++ + + V N +I + + ++++ + +EE +
Sbjct: 105 IEYILSNCSAKGIIVSNMLQLGKILSIWQNLPELTLVVVM---------NRLEE----TI 151
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYE--TIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
++++DL + KA + A K + E + DD+AT +YTSGTTG PKGVMLTH+N+
Sbjct: 152 EDVLDLNQA--KARGEKILAEKPWCLEGVPVEPDDVATIIYTSGTTGLPKGVMLTHRNIC 209
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIEL-MYTAVRNLKDDLQRY 289
++S I+ + D LS LP H YER GY+ IFS G + + ++ + ++
Sbjct: 210 ENVKSCSSIMRLDESDCSLSFLPLSHAYERTGGYYLIFSCGAAIYLAESIETISLNMSEA 269
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P + +VP +++ + GI KQI + SA I+ Y A K E + N+
Sbjct: 270 RPTIIFTVPRLFDRIKMGILKQISSQSA---------IKQKIFYWALK-TGEKYHQEINE 319
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
K + +L H LAEKLVYKKI++ G + VSGG +LP I
Sbjct: 320 KG--------------VAGKLLSAKHALAEKLVYKKIKNKFGGRLRYFVSGGAALPQKIG 365
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F++A+ + + G+GLTE+SPV RP G+VG + + ++ I AE E+L
Sbjct: 366 EFFQALDISILEGFGLTETSPVTHVNRPEKIKYGTVGPAVENVQVMI--AEDGEIL---- 419
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
++G +M+GY+ + +AT++ + DGW +TGDIG I G L +
Sbjct: 420 -----LKGPNIMKGYWNDEAATREVI-RDGWFHTGDIGVIDRD----------GYLKITD 463
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R K IV S G+N+ P+ +E SS + Q++VIG+ + A+IVP+ ++ A
Sbjct: 464 RKKHIIVTSGGKNIAPMPIENLISDSSYVDQVIVIGEKRPFLIALIVPEFNKLKEFAAAE 523
Query: 589 SIVHADASELSKEKTISLLYGELRKWTSK 617
I A EL + K++ ++ +L + S+
Sbjct: 524 GIQAASNKELIENKSVQQIFEKLLRTVSR 552
>gi|373459321|ref|ZP_09551088.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371720985|gb|EHO42756.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 615
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 163/599 (27%), Positives = 277/599 (46%), Gaps = 65/599 (10%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ NH ++ ++ ++I + L GV P+E++ ++S N W ++D G++ I
Sbjct: 26 KENHSWKSITWREMGKQITSVSSALLNWGVLPQERIGIYSQNRPEWTISDYGIMGVRGIT 85
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
+ SS +L +I N ++ L + E +++ + L ++ +I+ +
Sbjct: 86 TTIYATSSEIDLEYIINDAQIEILFIGGQEQYDKAIKILSENKTLKKMIVF-----DRST 140
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
I + V +D+ I G ++ N + +DIAT +YTSGTTG PKG
Sbjct: 141 KIQTDEKVIYFDDFIAQG------LANYNAQALKQRLSEASPEDIATIIYTSGTTGRPKG 194
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VMLT +N Q ++L + D L LP H Y+++ ++ S G+ + Y +
Sbjct: 195 VMLTQRNFFSQFKALDPLFNFSENDIELCFLPLSHAYQKSSTHWTQSHGVTVYYCENPKE 254
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--SFAYTAFKRI 339
+ D + +P +M+ VP +YE +Y+ + + +S +R + + + + Y AFK+
Sbjct: 255 VLDCFKEVRPTFMVGVPRLYEKMYAKVFATLENASGFKRGLFEWALEVGKEYQYKAFKK- 313
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSG 399
I L H LA KLV KI++ +G S
Sbjct: 314 -------------------------ENISPYLRLKHTLARKLVLNKIRNIMGGRLNFFSA 348
Query: 400 GGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GG+ L I+ F+ A G+ + GYGLTE+SPV++ RP G+ G +N ++KI A
Sbjct: 349 GGAPLSSEIEEFFFAAGIFIAQGYGLTETSPVVSCNRPDQFKFGTPGKVVNICQVKI--A 406
Query: 459 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 518
E+L V+G VM+GY++ P T + L DGW TGDIG++
Sbjct: 407 PDGEIL---------VKGENVMKGYYRKPELTAEVLSPDGWFRTGDIGYLD--------- 448
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
G L + R KD I+ + G+N+ P +E + I QI +IG ++ A+IVP
Sbjct: 449 -SDGFLHITDRKKDIIITAGGKNIAPQPIESHIGKDYYIEQIALIGDKRKYITALIVPSF 507
Query: 579 EEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
E + A++ I + SEL K EK I L + + S +I ++ +PF+V
Sbjct: 508 EALEEFAQKHDIKYDTLSELVKNEKVIQFYRQRLDELSKPLSAYERIKKFTLLSQPFSV 566
>gi|322419627|ref|YP_004198850.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
gi|320126014|gb|ADW13574.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
Length = 603
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 268/550 (48%), Gaps = 63/550 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GLR +G+KP +K+++ S+N W++AD G+L G + V ++ ++ + NHS++
Sbjct: 50 ARGLRKLGIKPGDKVAILSENRAGWIIADMGILCAGGVTVPVYPTNTPAQIQYTLNHSDA 109
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID-LGRE 182
+ + + ++ E K A+ + L+ + + + + EI D +
Sbjct: 110 RIVFISGKWQYRKLLEI---KDAIPMVQLVVSFERFLGEPALPLTTFYQLSEIDDPITDR 166
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-RSLYDIV 241
R+ DA I + + T +YTSGTTG PKGVML+H+N+L + ++
Sbjct: 167 EREEIGGVIDA--------IDPESLMTIIYTSGTTGTPKGVMLSHQNILFDVCATIRKAK 218
Query: 242 PAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPL 299
E G+ FLS LP HV ER+ GY++ +RG + + ++ + +++ QP M+ VP
Sbjct: 219 VLEEGEVFLSFLPLSHVLERSTGYYLPVARGAMIAFADSIEKIAENMLEVQPTVMVCVPR 278
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
++E ++S I + + S +R + + ++ I Y + I K+ +L+AL
Sbjct: 279 LFEKIHSRIHEYVHELSLYKRKLFKTVLSIGRRYVYARYI---------DKKVPFLLAL- 328
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 418
H +A++LV+KK++ G + K GG L I+ F+ +IGV +
Sbjct: 329 --------------QHAVADRLVFKKLRRRFGDNLKFCSCGGAPLDREINEFFWSIGVPI 374
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYGLTE+SPV+ GSVG P+ TE I AG G + VRG Q
Sbjct: 375 LEGYGLTETSPVLCNNTFDKLRFGSVGTPLESTEFTI----------AGD-GEILVRGPQ 423
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
VM GY+K+ ATK+A DGW TGDIG R LV+ R KD IV +
Sbjct: 424 VMLGYYKDEEATKEAF-RDGWFKTGDIG-----------RLEDDFLVITDRKKDLIVTAA 471
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G+N+ P +E R + Q V G + A++VP E++L A+ + + D +L
Sbjct: 472 GKNIAPQPIENLLKRDKYVSQAYVYGDRKPYLTALLVPTLEKLLEFAREKQLTYTDLEDL 531
Query: 599 SKEKTISLLY 608
+ + LY
Sbjct: 532 VVHEPVLELY 541
>gi|145219737|ref|YP_001130446.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
gi|145205901|gb|ABP36944.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
Length = 610
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 284/583 (48%), Gaps = 65/583 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+++ +F L+ G++P +++++ S+N W ++D +L+ GAI+V ++ +I
Sbjct: 49 EDVQNFTAYLKENGIEPGDRVAILSENRPGWYLSDMSILSLGAIDVPLYPSLPPNQIEYI 108
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
+SE+ A+ V N +I + + II+L + +EE +++
Sbjct: 109 LQNSEAKAIIVSNMLQLGKILSIWQNLPELMQIIVL---------NRLEE----KIEDVT 155
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
DL + + + I DD AT +YTSGTTG PKGVMLTH+N+ ++S
Sbjct: 156 DLNSCKIEGKKILQAKPRLLEGINISPDDTATLIYTSGTTGLPKGVMLTHRNICENVKSC 215
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMI 295
D++ + D LS LP H YER GY++ +Y A + + ++ +P +
Sbjct: 216 SDLITLDETDCSLSFLPLSHAYERTGGYYLLFGCGAAIYLAESIETVSLNIAEAKPTIIF 275
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP +++ + + +QKQI T S ++ + SFA + ++ K+ S
Sbjct: 276 TVPRLFDRIRANMQKQIATESQLKQRI------FSFALSTGEQYNRQMA-----KKGSVS 324
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
+AL H L+ KLVYKKI + G + VSGG +LP ++ ++
Sbjct: 325 LAL-------------KAAHALSRKLVYKKILAKFGGRLRYFVSGGAALPKETGEYFSSL 371
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ + GYGLTE+SP+ RP G+VG + + EI+I D G +
Sbjct: 372 GITILEGYGLTETSPITNVNRPEKVKFGTVGPTVRNVEIRIAD-----------DGEILF 420
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G +M+GY+K+ AT + + +DGW +TGDIG + G L + R K I
Sbjct: 421 KGPNIMKGYWKDVEATAEVI-KDGWFHTGDIGRLDDD----------GYLTITDRKKHII 469
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
V S G+N+ PL +E S + Q++VIG+ + A+I+PD E++ A I A
Sbjct: 470 VTSGGKNIAPLPIEHLIAESPFVEQVIVIGEKRPFLIALIIPDFEKLREFAVTAGIGDAT 529
Query: 595 ASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 634
EL + K +S +Y +L + S+ ++ +V EPFT+
Sbjct: 530 EKELLENKAVSQIYEKLLRSISRKLATHEKVRKFLLVAEPFTL 572
>gi|320353996|ref|YP_004195335.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
gi|320122498|gb|ADW18044.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
Length = 634
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 172/623 (27%), Positives = 305/623 (48%), Gaps = 82/623 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR D A R + R+ ++R + ++ + I + GLR+ G++ E+++L+
Sbjct: 32 FRQRVTRTPDRTAFR-QFDRQTDKWREYSWRQVAEAIGCWRHGLRIQGLQRGERVALWLA 90
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
NS W+ +Q LA G + V +R ++ L +I N + L V++ + ++ +
Sbjct: 91 NSVAWVACEQAALAEGLVVVPLYARDNAANLAYILNDCGARLLVVDSAAQWRQLRGCGHA 150
Query: 144 KAAMRFIILLW-----GKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYK 198
+++ ++ L G+ S+ P + + +P D + D G
Sbjct: 151 LPSLQQVVCLEHIDESGRPESLWP-VAQWLP---RDPVADNG------------------ 188
Query: 199 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 258
+ S+D+AT +YTSGTTG PKGVML+H+N+L ++ + PA D FLS LP H
Sbjct: 189 -PILQSNDLATIIYTSGTTGRPKGVMLSHRNILWNCWAVLQVHPARPDDLFLSFLPLSHS 247
Query: 259 YERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 316
+ER GY++ G + Y +++ L +D++ +P +ISVP +YE + + I++Q+
Sbjct: 248 FERTVGYYVPMMAGCCIAYCRSLQELAEDMRLIRPTILISVPRIYERIAARIEEQLERKG 307
Query: 317 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 376
R + A + + F R +E R+Q+ P+ LI WP L
Sbjct: 308 RLARWLFAAAVTVGF------RCFEA---QRDQRTPTLRDRLI------------WP--L 344
Query: 377 LAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
L + + ++ G + V+GG + I + IG+ + GYGLTE++PV++ P
Sbjct: 345 LRQLVAIPMLERFGGRVRLAVTGGAPVQEGISRLFLGIGLPLVQGYGLTEAAPVVSTNEP 404
Query: 437 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 496
N +VG P+ E+++ AE +E+L VRG VM GY++ P T + LD
Sbjct: 405 ANNRPTTVGPPLPGIEVRL--AEDHELL---------VRGPGVMLGYWQQPELTAEVLDA 453
Query: 497 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 556
DGWL TGDI +R G + + GR+K+ +V STGE V P+ +E A + L
Sbjct: 454 DGWLKTGDI-----------ARIDHGFIRIIGRSKEILVTSTGEKVAPVAMEMALEQHPL 502
Query: 557 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL----SKEKTISLLYGELR 612
I Q +V+G+ + A++V + + + A L + D + L ++ +S + G LR
Sbjct: 503 IDQAMVVGEGRPHVAALLVVNPQAWMRLAAHLGLDADDPASLDSDAARAAALSTVSGLLR 562
Query: 613 KWTSKCSFQIGPIHVVDEPFTVN 635
+ + Q+ + ++ E +T++
Sbjct: 563 AFPAPA--QVRGVCLLSEEWTID 583
>gi|294507212|ref|YP_003571270.1| long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
gi|294343540|emb|CBH24318.1| Long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
Length = 632
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 167/556 (30%), Positives = 264/556 (47%), Gaps = 69/556 (12%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GLR +G++ K++L ++ + V D G L G I+V S++E++ ++ +H+E+
Sbjct: 62 ALGLRALGLEQGTKVALLLESDVHYCVVDMGCLIGGLIDVPLYLSSAAEQMQYVVDHAEA 121
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
AL V NP+ + A L + +I+ PD+ + + + + + + LGR
Sbjct: 122 EALVVSNPKRLGQAAALLPDLPRIETVIVCDPGDEDARPDLPDRVTLKTLEAVQALGRAE 181
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYD 239
D + A + E I D+AT +YTSGTTG PKGVML+H+N+ + I + D
Sbjct: 182 ---VEDPSAAVDDLRAE-IDPQDLATIIYTSGTTGRPKGVMLSHENISSNAITSIAEIDD 237
Query: 240 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 299
G+ +S LP HV+ R Y RGI + + +L D L + +P SVP
Sbjct: 238 FETGPEGEVVISFLPLTHVFARMLQYAYMMRGISIYFAHPDDLVDALPKVRPTVFASVPR 297
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
V E +Y+GI+K++ ++ + ++++ Y +TR+Q
Sbjct: 298 VLEKVYAGIKKKVMGMQGLQKRIGEWGLQVAQDYD----------MTRSQP--------- 338
Query: 360 DWLWARIICAILWPLHLL----AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
PL+ L A++LV++K ++A G K V GG +L + A
Sbjct: 339 -------------PLYALKRAAADRLVFRKWRAAFGGRVKYVVVGGAALQPDLANILAAA 385
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
+ GYGLTE+SPVI+ RP N G+VG P+ E+KI AE E+L
Sbjct: 386 DITTLQGYGLTETSPVISYTRPQRNKPGTVGEPLPGVEVKI--AEDGEIL---------T 434
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VMQGY+K P T ++E+GWL+TGDIG G L + R K
Sbjct: 435 RGPHVMQGYYKAPDETDAVMEENGWLHTGDIGEFDED----------GFLKITDRKKALF 484
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII--VPDKEEVLMAAKRLSIVH 592
LSTG+ V P +E L+ VV+G+D++ A++ PD+ + L + + L
Sbjct: 485 KLSTGKYVMPQPIENRMGSDPLVDNAVVVGRDRKFCAALLFPAPDQAQALASERGLG-AE 543
Query: 593 ADASELSKEKTISLLY 608
D +L E I Y
Sbjct: 544 RDIEDLLTEPDIVDAY 559
>gi|83815604|ref|YP_445334.1| acyl-CoA synthetase, long-chain-fatty acid:CoA ligase [Salinibacter
ruber DSM 13855]
gi|83756998|gb|ABC45111.1| putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase
[Salinibacter ruber DSM 13855]
Length = 632
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 167/556 (30%), Positives = 264/556 (47%), Gaps = 69/556 (12%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GLR +G++ K++L ++ + V D G L G I+V S++E++ ++ +H+E+
Sbjct: 62 ALGLRALGLEQGAKVALLLESDVHYCVVDMGCLIGGLIDVPLYLSSAAEQMQYVVDHAEA 121
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
AL V NP+ + A L + +I+ PD+ + + + + + + LGR
Sbjct: 122 EALVVSNPKRLGQAAALLPDLPRIETVIVCDPGDEDARPDLPDRVTLKTLEAVQALGRAE 181
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYD 239
D + A + E I D+AT +YTSGTTG PKGVML+H+N+ + I + D
Sbjct: 182 ---VEDPSAAVDDLRAE-IDPQDLATIIYTSGTTGRPKGVMLSHENISSNAITSIAEIDD 237
Query: 240 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 299
G+ +S LP HV+ R Y RGI + + +L D L + +P SVP
Sbjct: 238 FETGPEGEVVISFLPLTHVFARMLQYAYMMRGISIYFAHPDDLVDALPKVRPTVFASVPR 297
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
V E +Y+GI+K++ ++ + ++++ Y +TR+Q
Sbjct: 298 VLEKVYAGIKKKVMGMQGLQKRIGEWGLQVAQDYD----------MTRSQP--------- 338
Query: 360 DWLWARIICAILWPLHLL----AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
PL+ L A++LV++K ++A G K V GG +L + A
Sbjct: 339 -------------PLYALKRAAADRLVFRKWRAAFGGRVKYVVVGGAALQPDLANILAAA 385
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
+ GYGLTE+SPVI+ RP N G+VG P+ E+KI AE E+L
Sbjct: 386 DITTLQGYGLTETSPVISYTRPQRNKPGTVGEPLPGVEVKI--AEDGEIL---------T 434
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VMQGY+K P T ++E+GWL+TGDIG G L + R K
Sbjct: 435 RGPHVMQGYYKAPDETDAVMEENGWLHTGDIGEFDED----------GFLKITDRKKALF 484
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII--VPDKEEVLMAAKRLSIVH 592
LSTG+ V P +E L+ VV+G+D++ A++ PD+ + L + + L
Sbjct: 485 KLSTGKYVMPQPIENRMGSDPLVDNAVVVGRDRKFCAALLFPAPDQAQALASERGLG-AE 543
Query: 593 ADASELSKEKTISLLY 608
D +L E I Y
Sbjct: 544 RDIEDLLTEPDIVNAY 559
>gi|189346901|ref|YP_001943430.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
gi|189341048|gb|ACD90451.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
Length = 610
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 167/571 (29%), Positives = 283/571 (49%), Gaps = 74/571 (12%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
LEQ++ F LR G+ P++++++ S+N W +AD +L GAI+V ++
Sbjct: 47 LEQDVQYFGAFLRENGISPKDRVAILSENRPGWYLADMAILNIGAIDVPLYPSLPPNQIE 106
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I + + + V N +I + + +I++ + +EE P+ ++
Sbjct: 107 YILRNCSAKGIVVSNMLQLGKILSIWQNLPDLNLVIVM---------NRLEE-PI---ED 153
Query: 176 IIDLGR--ESRKAFSDSN----DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+IDL R E+ DS D K + DD AT +YTSGTTG PKGVMLTH N
Sbjct: 154 VIDLNRVKEAGSKILDSKPWILDGIK------VEPDDTATIIYTSGTTGLPKGVMLTHGN 207
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQ 287
L ++S ++ + D LS LP H YER GY++ F+ G + + ++ + ++
Sbjct: 208 LCENVKSCSSVIRLDETDCSLSFLPLSHAYERTGGYYLLFACGAAIYLAESIETISLNIA 267
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+P + +VP +++ + + + KQI + SA ++ + ++ E +
Sbjct: 268 EAKPTIIFTVPRLFDRMKANMLKQISSESAIKQKIFNWAVKTG----------EQYHRQV 317
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
N+K + + I H LA+KLVY KI+ G + VSGG +LP
Sbjct: 318 NEKNRASITLSIQ--------------HNLADKLVYHKIRKKFGGRLRYFVSGGAALPQK 363
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
I F++A+G+ + G+GLTE+SPV RP G+VG + + ++KI AE E+L
Sbjct: 364 IGEFFQALGINILEGFGLTETSPVTNVNRPDKIKFGTVGPAVKNVQVKI--AEDGEIL-- 419
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
++G +M+GY+++ +ATK+ + DGW +GDIG I G L +
Sbjct: 420 -------LKGPNIMKGYWQDETATKEVI-RDGWFYSGDIGEIDRD----------GYLKI 461
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R K IV S G+N+ P +E + S+ + Q++VIG+ + A+IVPD ++ A
Sbjct: 462 TDRKKHIIVTSGGKNIAPQPIENLIIESAFVDQVIVIGEKRPFLIAVIVPDFVKLNEYAA 521
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTSK 617
+ SI EL + K I +Y +L + S+
Sbjct: 522 QNSISAKTNKELIENKAIQQIYEKLMRNISR 552
>gi|313205365|ref|YP_004044022.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444681|gb|ADQ81037.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 587
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/543 (29%), Positives = 263/543 (48%), Gaps = 75/543 (13%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ +R ++ F + + D + G+ +G++P +K+ + S N W + D + GA
Sbjct: 25 VCKREGAWKKFSICEYVELTNDLSYGMLALGIQPGDKIGIVSSNRPEWNMLDFAAMQIGA 84
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
+++ S + HI NH+E + +E E ++ L ++ I + S
Sbjct: 85 VSIPIYPTISQNDYSHILNHAEMKMIFIEGKELRTKLKPILPEIKTLKEIFTFSDENSE- 143
Query: 161 APDIVEEIPVFSY-DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ Y D++I LG+E+R+ D K +I DD+AT +YTSGTTG+
Sbjct: 144 ----------YKYLDQLITLGKENRQP-----DKLIQLK-ASIKPDDLATIIYTSGTTGS 187
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-A 278
KGVML+H+N++ Q++SL + +PA+ +K LS LP H YER Y G+ + Y +
Sbjct: 188 QKGVMLSHQNIVSQLKSL-ESIPAKWSNKALSFLPLCHAYERMLVYLYQYLGMSVYYAES 246
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY-TAFK 337
+ + ++++ P M VP + E +Y +++ S ++ + +F T F+
Sbjct: 247 LGTIAENIKEINPTMMSCVPRLLEKIYD----KLYLSGKKLPFFSKIIYYWAFNLATKFQ 302
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
G+ K LAEKL+Y K ++AIG +
Sbjct: 303 LEEMGWYYNIKYK--------------------------LAEKLIYSKWRAAIGGNFDIV 336
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIK 454
VSGG ++ HI F+ AIG+ V GYGL+E+SPVIA R G+VG P+ E+K
Sbjct: 337 VSGGSAIQPHIASFFSAIGMPVFEGYGLSETSPVIAVSQRGENGRKFGTVGLPLQGVEVK 396
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
+ AE +E++ RG VM GY+K+P+ T QA+D DGW +TGD G P
Sbjct: 397 L--AERDEII---------CRGHNVMLGYYKDPALTAQAIDNDGWFHTGDTGKFTPE--- 442
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L++ GR K S G+ V P +E S+ I ++V+G++++ A++
Sbjct: 443 -------GQLIITGRLKSIFKTSFGKYVNPQAIESRFTESAFIENMIVLGENKKFAAALL 495
Query: 575 VPD 577
PD
Sbjct: 496 SPD 498
>gi|373457238|ref|ZP_09549005.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371718902|gb|EHO40673.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 652
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 288/569 (50%), Gaps = 75/569 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+R + ++++ + FA GL +GVK E+++L S+ WL+++ G+L GAI+
Sbjct: 26 KRTDSYHYLTYRQMQELVHQFAAGLLSMGVKKGERIALISEGRNYWLMSELGVLYCGAIS 85
Query: 103 V---VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
V V+ + S + ++ S V ++ + ++I L + +ILL ++S
Sbjct: 86 VPISVKINELSDLKFRLAHSGSRVVIVSGQQAHKIDKIKNDL---PELEKVILLDARESY 142
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARK--HYKYETIGSDDIATYVYTSGTT 217
+ +I+ DE++ G+E F + D RK + ++ I DD AT +Y+SGTT
Sbjct: 143 ESDEIL-------VDEVLARGKE----FLKNEDGRKRLNQTWQAIEEDDYATIMYSSGTT 191
Query: 218 GNPKGVMLTHKNLL---HQIRSLYDIVPAENGDKFLSML-PPW-HVYERACG-YFIFSRG 271
+PKGV+L+HKN + Q ++ DI P F+++L PW H + G Y + G
Sbjct: 192 ADPKGVILSHKNYVVNTEQSLTVMDIPPY-----FVTLLILPWDHAFAHTVGLYTLIKNG 246
Query: 272 IEL--------MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
+ ++N+ +L+ +PH+++SVP + + I+K I A +
Sbjct: 247 ASMAAVQSGKTQLETLKNIPKNLKEIRPHFLLSVPALAKNFRKNIEKAIRDKGKATERLF 306
Query: 324 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
+ ++I++ Y EG W + + PL+ L +K+++
Sbjct: 307 QQALKIAYLYNG-----EG------------------WNKGKGFRKVYKPLYALYDKVLF 343
Query: 384 KKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
+KI+ + G GGG+L + + F+ AIG+ + GYGLTE++PVI++ +P + LG
Sbjct: 344 RKIRDSFGGRLQFFIGGGALLDIEMQRFFYAIGIPMFQGYGLTEAAPVISSNKPHEHKLG 403
Query: 443 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 502
+ G + E+KIVD NE LP G +G + V+G VM GY+KNP+AT+ AL DGWL+T
Sbjct: 404 TSGKVLKGMEVKIVDERGNE-LPTGQRGEICVKGENVMVGYWKNPTATENAL-RDGWLHT 461
Query: 503 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIV 561
GD+G++ G L + GR K ++ + GE P +EEA L S I QI+
Sbjct: 462 GDLGYLDEE----------GYLYVLGREKSLLIGNDGEKYSPEGIEEAILDHSPYIDQIM 511
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
+ A++VP+K V+ A+ ++
Sbjct: 512 LYNNQSPYTIALVVPNKAAVIEWARENNV 540
>gi|253700714|ref|YP_003021903.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
gi|251775564|gb|ACT18145.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
Length = 603
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/573 (28%), Positives = 268/573 (46%), Gaps = 67/573 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
R+N ++ + ++ L + GLR +G+KP +++++ S+N W++AD G+L G +
Sbjct: 29 RKNGQWVILSYAQFYNRALMVSRGLRKLGMKPGDRIAILSENRAGWIIADMGILCAGGVT 88
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V + + E++ + + + + V + + ++ + + + ++ A
Sbjct: 89 VPVYATGTPEQIAYALSSCGARIVFVSSKVQYRKLLQVRDALPDLELVVSFERFLGEAAL 148
Query: 163 DIVEEIPVFSYDE-IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
+ + D+ I+D R ++ DS + + AT +YTSGTTG PK
Sbjct: 149 QVTTFYQLSEVDDPILDAERGEIESVIDS-----------LTPEMPATIIYTSGTTGTPK 197
Query: 222 GVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-A 278
G +LTH NL+ +R+ D V GD FLS LP HV+ER+ GY++ S G + + +
Sbjct: 198 GAVLTHGNLVFDVRATLDKVGGVGQGDLFLSFLPLSHVFERSAGYYLPLSCGAAIAFADS 257
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS--FAYTAF 336
+ + +++ P M+ VP +E +YS I + + S +R + R + + +AY +
Sbjct: 258 MEKISENMMELHPTIMVCVPRFFEKIYSRIYEAVHQLSLFKRKMFRRALAVGRRYAYARY 317
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 395
Y F L+ H +A++LV+ K++S G K
Sbjct: 318 IDKYVPFWLSLQ--------------------------HAIADRLVFSKLRSRFGDRLKF 351
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
SGG L I+ F+ +IGV V GYGLTE+SPV+ + GSVG P+ TEI I
Sbjct: 352 CASGGAPLDREINEFFWSIGVPVFEGYGLTETSPVLCSNSFDALRFGSVGTPLASTEIAI 411
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
G V RG QVM GYF + +AT++AL DGW TGDIG
Sbjct: 412 -----------AGDGEVLARGPQVMAGYFNDEAATREAL-VDGWFRTGDIG--------- 450
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
R G L + R KD IV + G+N+ P +E R I Q V G + A++V
Sbjct: 451 --RMEEGYLYITDRKKDLIVTAAGKNIAPQPIENLLKRDKYISQAYVYGDRKPYLTALLV 508
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
P E +L A+ I + D +L + + LY
Sbjct: 509 PTLERLLEFAQERKIAYHDLEDLVVHQPVIELY 541
>gi|448383967|ref|ZP_21562965.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
gi|445658956|gb|ELZ11768.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
Length = 652
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 271/561 (48%), Gaps = 82/561 (14%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
FR +++ + + + G R +GV+ +++ +FS+ W D +L+ GA
Sbjct: 60 EFRTLSYAEMRDIVRNLSAGFRELGVETGDRVGIFSNTRMEWAQTDFALLSAGAAVTTVY 119
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
+ SS +++ ++ + ++ + VEN + + + + + FI+ ++
Sbjct: 120 TSSSPDQVAYLLDDPDADGVVVENADLLENVL-AVEDELDLEFIV------------TID 166
Query: 167 EIPVFS-YDEIIDLGRESRKAFSDSNDARKHYKYET----IGSDDIATYVYTSGTTGNPK 221
E+ + D+++ LG + + DA Y+ I DD+A+ +YTSGTTG PK
Sbjct: 167 EVDGYDDRDDVLTLG----EVYDRGEDAFDLETYQERIDGIDLDDLASLIYTSGTTGKPK 222
Query: 222 GVMLTHKNLLHQI---RSLYDIVPAENGDK--------FLSMLPPWHVYERACGYF-IFS 269
GV LTH N + R + P ++ D +S LP HV+ER G+F +F+
Sbjct: 223 GVQLTHWNFRSNVNGSRKRFGPRPDKDDDVPVLDEESVAMSYLPLAHVFERTAGHFALFA 282
Query: 270 RGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 328
G + Y + L++D QP SVP VYE +Y GI+++ SS +RR+ A
Sbjct: 283 GGTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKIYDGIREEASGSSVSRRIFEWA-TD 341
Query: 329 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 388
+ AY + + P AIL LA+KLV+ ++
Sbjct: 342 VGVAY-------------QQAESPG---------------AILKAKQALADKLVFSTVRE 373
Query: 389 AIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
A+G + + +SGGGSL + Y A+G+ + GYGLTE+SP++A P +G++G
Sbjct: 374 ALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPIVATNPPEGAKIGTIGPT 433
Query: 448 INHTEIKIVDAETNE---VLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WL 500
+++ E+K+ +A ++ AG G + V G V QGY+ P AT+ A D+DG W
Sbjct: 434 LSNVEVKVDEAIADQDAFTDDAGEVGELLVNGPNVTQGYWNKPGATEGAFTEDDDGTRWF 493
Query: 501 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 560
TGDI + P G L R K IVLSTG+NV P LE+A S ++ Q
Sbjct: 494 RTGDIIHVRPD----------GYLEFRDRVKQIIVLSTGKNVAPGPLEDAFAASEVVEQA 543
Query: 561 VVIGQDQRRPGAIIVPDKEEV 581
+V+G ++ GA++VP+ V
Sbjct: 544 MVVGDGEKFIGALLVPNTNHV 564
>gi|429191224|ref|YP_007176902.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135442|gb|AFZ72453.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 653
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 154/561 (27%), Positives = 268/561 (47%), Gaps = 69/561 (12%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
FR +++ + A G R +G+ +++ +F++ W AD +L+ GA+
Sbjct: 65 EFRTISYAEMRDIVRHLAAGFRELGIDTGDRVGIFANTRMEWAQADFALLSAGAVITTVY 124
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
SS +++ ++ + ++ + VEN + R+ E + + F++ + + +
Sbjct: 125 KSSSPDQVRYLLDDPDADGVVVENEDVLERVLE-VEDDLDLEFLVSM-----DELTEYAD 178
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPKGVML 225
V+ ++ +LG D+ D + + + G DD+A+ +YTSGTTG PKGV L
Sbjct: 179 RDDVYGLADVYELG-------VDAFDLETYQGWVDEPGLDDLASLIYTSGTTGQPKGVEL 231
Query: 226 THKNL---LHQIRSLY--------DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIE 273
TH N ++QIR D+ + +S LP HV+ER G+F+ F+ G
Sbjct: 232 THGNFRANVNQIRKRMAPRPDRDDDVASVDENSLTVSYLPLAHVFERTAGHFLMFASGAC 291
Query: 274 LMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
+ Y + L++D + +P+ SVP VYE +Y I++Q S+ R+ A
Sbjct: 292 VGYAEDPDTLQEDFETVEPNTATSVPRVYEKIYDAIREQASESAVKERIFDWATD----- 346
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+++ A IL LA+KLV+ ++ +G
Sbjct: 347 ------------------------VGVEYQEADTPGPILSAKQALADKLVFSTVREGLGG 382
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ + +SGGGSL + Y A+G+ + GYGLTE++PV+ P +G++G +
Sbjct: 383 NLEILISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPVVTVNPPEEPKIGTIGPALPDV 442
Query: 452 EIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
E++I ++ N+ G G + V+G V +GY+ P AT ++ EDGW TGDI +
Sbjct: 443 ELRIDESVANQAAFDDPGEVGELLVKGPNVTEGYWDKPGATDRSFTEDGWFKTGDIVHLR 502
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
P G + R K IVLSTG+NV P +E+A S ++ Q +V+G D++
Sbjct: 503 PD----------GYVEFRDRVKQLIVLSTGKNVAPGPIEDAFAASEVVDQAMVVGNDEKF 552
Query: 570 PGAIIVPDKEEVLMAAKRLSI 590
GA++VPD + V A++ I
Sbjct: 553 VGALLVPDTDHVREWAEKAGI 573
>gi|448323701|ref|ZP_21513154.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620837|gb|ELY74324.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 648
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 154/561 (27%), Positives = 268/561 (47%), Gaps = 69/561 (12%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
FR +++ + A G R +G+ +++ +F++ W AD +L+ GA+
Sbjct: 60 EFRTISYAEMRDIVRHLAAGFRELGIDTGDRVGIFANTRMEWAQADFALLSAGAVITTVY 119
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
SS +++ ++ + ++ + VEN + R+ E + + F++ + + +
Sbjct: 120 KSSSPDQVRYLLDDPDADGVVVENEDVLERVLE-VEDDLDLEFLVSM-----DELTEYAD 173
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPKGVML 225
V+ ++ +LG D+ D + + + G DD+A+ +YTSGTTG PKGV L
Sbjct: 174 RDDVYGLADVYELG-------VDAFDLETYQGWVDEPGLDDLASLIYTSGTTGQPKGVEL 226
Query: 226 THKNL---LHQIRSLY--------DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIE 273
TH N ++QIR D+ + +S LP HV+ER G+F+ F+ G
Sbjct: 227 THGNFRANVNQIRKRMAPRPDRDDDVASVDENSLTVSYLPLAHVFERTAGHFLMFASGAC 286
Query: 274 LMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
+ Y + L++D + +P+ SVP VYE +Y I++Q S+ R+ A
Sbjct: 287 VGYAEDPDTLQEDFETVEPNTATSVPRVYEKIYDAIREQASESAVKERIFDWATD----- 341
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+++ A IL LA+KLV+ ++ +G
Sbjct: 342 ------------------------VGVEYQEADTPGPILSAKQALADKLVFSTVREGLGG 377
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ + +SGGGSL + Y A+G+ + GYGLTE++PV+ P +G++G +
Sbjct: 378 NLEILISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPVVTVNPPEEPKIGTIGPALPDV 437
Query: 452 EIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
E++I ++ N+ G G + V+G V +GY+ P AT ++ EDGW TGDI +
Sbjct: 438 ELRIDESVANQAAFDDPGEVGELLVKGPNVTEGYWDKPGATDRSFTEDGWFKTGDIVHLR 497
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
P G + R K IVLSTG+NV P +E+A S ++ Q +V+G D++
Sbjct: 498 PD----------GYVEFRDRVKQLIVLSTGKNVAPGPIEDAFAASEVVDQAMVVGNDEKF 547
Query: 570 PGAIIVPDKEEVLMAAKRLSI 590
GA++VPD + V A++ I
Sbjct: 548 VGALLVPDTDHVREWAEKAGI 568
>gi|448593389|ref|ZP_21652387.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
gi|445730297|gb|ELZ81887.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
Length = 667
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 252/535 (47%), Gaps = 74/535 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G+ E+++ LF+ W D +LA G + SS ++ ++ +
Sbjct: 77 LAAGFRDLGLDAEDRVGLFAHTRMEWAQTDFAVLAAGGAVTTVYTSSSERQVRYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS-YDEIIDLGR 181
+ A VEN E R+ + ++FI+ +++E D+I+ LG
Sbjct: 137 ANAAVVENEELLERVL-AVEDDLDLKFIV------------VMDEFDGHDDRDDILTLGE 183
Query: 182 ESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-- 238
R+ D D + + + DD+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRRG-EDVFDEETYESWLDARDPDDLASLIYTSGTTGQPKGVKLTHWNFRSNVNESYRR 242
Query: 239 -------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQR 288
D P D LS LP HV+ER G+F+ F+ G + Y + L+DD Q
Sbjct: 243 FGPHPGRDDAPFIGPDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLRDDFQL 302
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
QP SVP VYE LY I+ Q S +R+ A + + Y
Sbjct: 303 VQPTTGTSVPRVYEKLYDAIRTQASESPLKKRIFEWA-VGVGKEY-------------HT 348
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+ P YL+ L H LA++LV+++++ A+G + + +SGGGSL +
Sbjct: 349 SEAPGYLLEL---------------KHQLADRLVFEQVRDALGGNMEFFISGGGSLSAEL 393
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--P 465
Y +G+ + GYGLTE+SPVI+ P +G++G+P+ + E+K+ + L
Sbjct: 394 CALYHGMGLPIFEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVEVKLDKTVVGDTLGDA 453
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCG 521
G G + VRG V +GY+ P T+ A +ED W TGDI + P
Sbjct: 454 GGDIGELLVRGPSVTEGYWNRPEETEAAFEEDDDGNRWFRTGDIVELRPD---------- 503
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
G L RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 504 GYLAFRERAKQILVLSTGKNVAPGPIEDAFASSDVVEQCMVLGDGRKFVSALIVP 558
>gi|448577228|ref|ZP_21642858.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
gi|445727873|gb|ELZ79482.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
Length = 667
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 255/534 (47%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G+ E+++ LF+ W D +LA G + + SS ++ ++ +
Sbjct: 77 LAAGFRDLGLDAEDRVGLFAHTRMEWAQTDFAVLAAGGVVTTVYTSSSERQVRYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ A+ VEN E R+ + ++F++++ D +E D+I+ LG
Sbjct: 137 ANAVVVENEELLERVL-AVEDDLDLKFVVVM---------DELEGHD--DRDDILTLGEL 184
Query: 183 SRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY--- 238
R+ D D + + + +D+A+ +YTSGTTG PKGV L+H N + Y
Sbjct: 185 YRRG-EDVFDEETYESWLDARDPEDLASLIYTSGTTGQPKGVKLSHWNFRSNVNESYRRF 243
Query: 239 ------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
D P + D LS LP HV+ER G+F+ F+ G + Y + L+DD Q
Sbjct: 244 GPHPGRDDAPFISSDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLRDDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
QP SVP VYE LY I+ Q S +R+ A + + Y
Sbjct: 304 QPTTGTSVPRVYEKLYDAIRTQASESPLKKRIFEWA-VGVGKEY-------------HTS 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ P YL+ L H LA++LV+++++ A+G + + +SGGGSL +
Sbjct: 350 EAPGYLLEL---------------KHQLADRLVFEQVRDALGGNMEFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y +G+ + GYGLTE+SPVI+ P +G++G+P+ + E+K+ + L
Sbjct: 395 ALYHGMGLPIFEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVEVKLDKTVVGDTLGDAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRG V +GY+ P T+ A +ED W TGDI R G
Sbjct: 455 GDIGELLVRGPSVTEGYWNRPEETESAFEEDDDGNRWFRTGDI----------VEHRPDG 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
L RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YLAFRERAKQIMVLSTGKNVAPGPIEDAFASSDVVEQCMVLGDGRKFVSALIVP 558
>gi|408672874|ref|YP_006872622.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
gi|387854498|gb|AFK02595.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
Length = 588
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/616 (28%), Positives = 286/616 (46%), Gaps = 87/616 (14%)
Query: 30 NCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWL 89
N D A++I+ +++ + Q I + GL IG+K +K+++ S++ W
Sbjct: 20 NKPDVFASKIK-----GEWQLVSAADFLQSINQLSLGLLSIGIKRGDKIAVISESRPEWN 74
Query: 90 VADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRF 149
+ D + GAI V + E+ +I+N + + V + + + A+T A
Sbjct: 75 IVDFAIQQVGAIGVPLYPNITVEDYRYIFNDASIKLVFVGDADLLKK-AQTAAKDA---- 129
Query: 150 IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG----SD 205
P + E ++ +D+II G + K S+S K E+I +D
Sbjct: 130 ------------PSVQE---IYCFDKII--GSKHWKEVSESAKNEDVEKLESIKQSIKTD 172
Query: 206 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 265
D+ T +YTSGTTGNPKGVML+H NL+ S D P + + LS LP HVYER Y
Sbjct: 173 DLLTIIYTSGTTGNPKGVMLSHLNLISNFESCRDNFPIDETCRALSFLPLNHVYERMVLY 232
Query: 266 FIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 324
S+G+ + Y + + DDL+ +P +VP + E +Y I + + S +R +
Sbjct: 233 LYMSKGMSIYYAQNMATIADDLRDVKPQIFTTVPRLLEKVYDKIVAKGYELSGLKRKIFL 292
Query: 325 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 384
+ + Y NQ+ ++ + W A+KLV+
Sbjct: 293 WALDLGLKYDP------------NQQFSAWYNFQLKW----------------AQKLVFS 324
Query: 385 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR--PTCNVL 441
K Q A+G + + SG +L + + A G+ V GYG+TE+SPVIA R P +
Sbjct: 325 KWQEALGGNIRMICSGAAALQPRLARVFWAAGIPVSEGYGMTETSPVIATNRVMPLDLRI 384
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
+VG I+ T +KI AE E+L V+G VM GY+ P TK+ +D DGWL+
Sbjct: 385 STVGPIIDGTTVKI--AEDGEIL---------VKGPNVMLGYYNKPELTKEVIDADGWLH 433
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGDIG + G L + R K+ S G+ V P LE S I Q++
Sbjct: 434 TGDIGKLDE----------GKYLKITDRKKEIFKTSGGKYVAPQVLENKMKESVFIEQMM 483
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH-ADASELSKEKTISLLYGELRKWTSKCSF 620
V+G+ Q+ P A+I+P+ + K I + DA + ++ + L++ E+ K+ + +
Sbjct: 484 VVGESQKFPAALIIPEFVALRDWCKTQGIDYTTDAEIIKNQQVLKLIFSEISKFNKEFAQ 543
Query: 621 --QIGPIHVVDEPFTV 634
Q+ ++ P+T+
Sbjct: 544 YEQVKKFTLLANPWTI 559
>gi|448312176|ref|ZP_21501926.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445602683|gb|ELY56655.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 654
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 279/606 (46%), Gaps = 90/606 (14%)
Query: 20 HRHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLS 79
R+ ++ R+ D+V + +R +++ + + G +GV +++
Sbjct: 37 QRYKGGIYDRSLTDSVLP----AATPGEYRAISYAEMADIVRKLSAGFHDLGVDRGDRVG 92
Query: 80 LFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAE 139
+F++ W D +L GA + SS ++ ++ + ++ A+ VEN R+ E
Sbjct: 93 IFANTRMEWAQCDFALLTAGAAITTVYTSSSPNQVEYLLDDPDASAVVVENEALLERVLE 152
Query: 140 TLCSKAAMRFIILL-----WGKKSSVAPDIVEEIPVFSYDEIIDLGRES--RKAFSDSND 192
+ + + FI+ + + +S + + EI D G E+ R+A+ D
Sbjct: 153 -VEDELDLEFIVSMDEFEGYDDRSDI----------HTLGEIYDRGEENFDREAYEARID 201
Query: 193 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD-- 247
A + DD+A+ +YTSGTTG PKGV LTH N ++ +R Y P + D
Sbjct: 202 A--------VELDDLASLIYTSGTTGQPKGVQLTHWNFRSNVNAVRKRYGPRPDKADDVP 253
Query: 248 ------KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPL 299
K +S LP HV+ER G+F+ F+ G + Y + L++D + QP SVP
Sbjct: 254 TLDQESKAMSYLPLAHVFERTAGHFVLFASGASVAYAEDPDTLQEDFELVQPTTATSVPR 313
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
VYE +Y GI++Q S A RR+ A + Y
Sbjct: 314 VYEKIYDGIREQASQSDAKRRIFEWA-TDVGVQYQE------------------------ 348
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 418
A IL LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ +
Sbjct: 349 ----ADSPGPILKAKQALADKLVFSTVREALGGEIELLISGGGSLSKELCQLYHAMGLPI 404
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE---VLPAGSKGIVKVR 475
GYGLTE+SPV+ P +G++G ++ ++K+ ++ N+ G G + V
Sbjct: 405 YEGYGLTETSPVVTTNPPEAVKIGTIGPALDGVDLKVDESVANQEAFTDDPGDVGELLVS 464
Query: 476 GSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
G V QGY+ P AT+ + D+DG W TGDI I P G L R K
Sbjct: 465 GPNVTQGYWNKPGATQGSFTEDDDGTRWFRTGDIVHIRPD----------GYLEFRDRVK 514
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
IVLSTG+NV P +E+A S ++ Q +V G ++ GA++VP++E V A I
Sbjct: 515 QIIVLSTGKNVAPGPIEDAFAASEIVEQAMVTGDGEKFIGALLVPNEEHVRDWADEEGID 574
Query: 592 HADASE 597
D SE
Sbjct: 575 LPDDSE 580
>gi|419802454|ref|ZP_14327641.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|419846035|ref|ZP_14369293.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
gi|385190316|gb|EIF37764.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|386414665|gb|EIJ29217.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
Length = 605
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 275/560 (49%), Gaps = 61/560 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+ +Q++ + ++ ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 38 NSFQQQLDQLSLAFLACNIQVQDKIAIFAHNMSRWTIADIAALQVRAITVPIYATNTAQQ 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
I NH++ L V + E +++ E ++ I+ + K + + E +
Sbjct: 98 AEFILNHADVKILFVGDQEQYDQALEIAHQCPQLQKIVAM---KEQI--QLTETTLSCYW 152
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
DE+I LG +A ++ A K DD+ T +YTSGTTG PKGVML + NL HQ
Sbjct: 153 DELIQLGAAEFQAEFETRLANK-------TMDDLFTIIYTSGTTGEPKGVMLDYNNLAHQ 205
Query: 234 IRSLYDIVPAENGDKF-LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQP 291
+ + +DI N D+ LS LP H++ERA ++ RG L Y N +++ L +P
Sbjct: 206 LEA-HDIALDVNQDEVSLSFLPFSHIFERAWVAYVLHRGAILCYLENTNQVREALMEVRP 264
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+M +VP YE +YS + ++ + R+++ I + ++ ++ L++N+K
Sbjct: 265 TFMCAVPRFYEKIYSAVLDKVQKAPFIRQMIFHLAIAVG------QKRFD--LLSQNKKV 316
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
P + L +++A+KLV+ K++S +G K GG L I LF
Sbjct: 317 PFF----------------LQKCYVIADKLVFSKLRSLLGGRIKMMPCGGAKLEPSIGLF 360
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ IG+ +++GYG+TE++ ++ S+G + +TE+KI E NE+L
Sbjct: 361 FHCIGINIKLGYGMTETTATVSCWDDHHFNPNSIGKLMPNTEVKI--GENNEIL------ 412
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
VRG VM+GY+K P T QA EDG+L TGD G G L + R
Sbjct: 413 ---VRGGMVMKGYYKKPEETTQAFTEDGFLKTGDAGEFDAE----------GNLFITDRI 459
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
K+ + S G+ + P +E + I QI +I ++ A+IVP + V A++L+I
Sbjct: 460 KELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSVEEYARKLNI 519
Query: 591 VHADASELSKEKTISLLYGE 610
+ D EL K I ++ +
Sbjct: 520 KYQDRIELLKHSEIIKMFEQ 539
>gi|448297936|ref|ZP_21487970.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
gi|445592662|gb|ELY46848.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
Length = 652
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 270/574 (47%), Gaps = 78/574 (13%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
FR +++ + + G +GV+ +++ +F+D W +D +L GA +
Sbjct: 61 FRTISYTEMRDIVRKLSAGFHDLGVEQGDRVGIFADTRMEWAQSDFALLGAGAAVTTVYT 120
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
SS ++ ++ + + A+ VEN E + E + + + FI+ + + S D +
Sbjct: 121 SSSPNQVEYLLDDPGASAVVVENEELLANVLE-VEDELDLEFIVSM--DEISGYDDRDD- 176
Query: 168 IPVFSYDEIIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
+++ DE+ D G E+ +A+ DA DD+A+ +YTSGTTG PKGV L
Sbjct: 177 --IYTLDEVYDRGEETFDLEAYQKRVDAPDL--------DDLASLIYTSGTTGQPKGVQL 226
Query: 226 THKNLLHQIRSLY----------DIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIE 273
TH N + ++ D VPA + + +S LP HV+ER G+F+ F+ G
Sbjct: 227 THWNFRSNVNAVRKRFAPRPDKPDDVPALDEESQAVSYLPLAHVFERTAGHFVLFATGAC 286
Query: 274 LMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
+ Y + L++D QP SVP VYE +Y I++Q SS R+ A
Sbjct: 287 VAYAESSETLQEDFSLVQPTTATSVPRVYEKIYDAIREQASESSVKERIFEWATD----- 341
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+++ A IL LA+KLV+ ++ A+G
Sbjct: 342 ------------------------VGVEYQRADSPGPILNAKRSLADKLVFSTVREALGG 377
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ +SGGGSL + Y A+G+ + GYGLTE+SPV+ P +G++G +
Sbjct: 378 EIELLISGGGSLSPELCQLYHAMGLPIYEGYGLTETSPVVTTNPPEAVKIGTIGPALPGV 437
Query: 452 EIKI----VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTG 503
+++I VD ET P G G + V+G V QGY+ P AT+ A DEDG W TG
Sbjct: 438 DLRIDETVVDQETFTDDP-GEVGELLVKGPNVTQGYWNKPGATRSAFTEDEDGDRWFRTG 496
Query: 504 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 563
DI + P G L RAK IVLSTG+NV P LE+A S +I Q +V+
Sbjct: 497 DIVHLRPD----------GYLEFRDRAKQIIVLSTGKNVAPGPLEDAFAASEIIEQAMVV 546
Query: 564 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
G ++ GA++VP+ E V A I D E
Sbjct: 547 GDGEKFIGALLVPNTEHVRDWASEEGIDLPDDPE 580
>gi|268316194|ref|YP_003289913.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262333728|gb|ACY47525.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 633
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 174/619 (28%), Positives = 294/619 (47%), Gaps = 67/619 (10%)
Query: 38 RIRISRRNHRFRVFCE---SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQG 94
R +S ++ R + + + +LEQ + A L GV+P +++++ S+N W + D
Sbjct: 26 RPALSYKDRRTKTWVDITWEELEQHVHAMAGYLHKRGVRPGDRVAILSENRPEWAITDLA 85
Query: 95 MLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAA-MRFIILL 153
G +NV + + ++ +I S + L V + R AET+ + ++ I+ L
Sbjct: 86 TQILGGVNVALYTSLPASQVGYIVKDSGARILVVSSAVQL-RKAETIFDECPELQEIVTL 144
Query: 154 WGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 213
+ P V ++D+++ G A+ ++A E + DD++ +YT
Sbjct: 145 SEMRKDHPPY------VRAWDDVMAEG----AAYWAEHEAELSKLAEQVQPDDLSALIYT 194
Query: 214 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGI 272
SGTTG PKGVMLTH+N +++ V D LS LP H +ER GY + + G
Sbjct: 195 SGTTGLPKGVMLTHRNFCSNVQAALQRVDFGPADHHLSFLPLCHSFERTAGYTAVLACGA 254
Query: 273 ELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ Y ++ L +L +P MISVP ++E +Y+ I K + S + ++ + + +
Sbjct: 255 RISYAESIEALSQNLLEVRPTVMISVPRLFERVYNAIHKSVEKSPSLQQKIFHWAVGVGR 314
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
A + L R +L H LA +LV++K+ +G
Sbjct: 315 RMAACR------------------------LEGRTPGPVLQLQHRLAHRLVFQKLHDRLG 350
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI-- 448
+ + VSGG +LP HI F+ AIG+ + GYGLTE++PV+ P G+VG +
Sbjct: 351 GNLRFAVSGGAALPRHIGEFFLAIGLTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPG 410
Query: 449 ------NHTEIKIVDAETNEVLPAG---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 499
T+ KIV + + P+ +G + V+G VM+GY+ N AT++ D DGW
Sbjct: 411 VTIAIQRLTDGKIVGQLSGDDYPSDLTTEEGEILVKGPNVMKGYWNNEEATREVFDADGW 470
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 559
+TGD+G R G LV+ R K IV G+N+ P +E+ + I Q
Sbjct: 471 FHTGDVG-----------RFDRGYLVITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQ 519
Query: 560 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA-DASELSKEKTISLLYGELRKWT--S 616
IVVIG+ + A+IVPD E + A+ ++ A D + L+ + +L LR++ +
Sbjct: 520 IVVIGEGREFLTALIVPDFEALRQYAQEHNLQAASDEALLALPEIRALFEQSLRRYNRHA 579
Query: 617 KCSFQIGPIHVVDEPFTVN 635
+I ++ EPFT+
Sbjct: 580 PAHERIRAFRLLSEPFTIE 598
>gi|228472919|ref|ZP_04057676.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275501|gb|EEK14278.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 592
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 277/602 (46%), Gaps = 89/602 (14%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLF-SDNSCRWLVADQGMLATG 99
+++ N+ + + ++I + L +GV+P +K+++ S+N W + D ++ G
Sbjct: 25 VTKYNNTWTPISSEEYVKKINQVSRALLRLGVQPHDKIAMVTSNNRTEWHILDMAIMQIG 84
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
A NV E+ ++I NH+E + E F +++ + A + +
Sbjct: 85 AHNVPIYPTIPKEDYIYILNHAEVKYCFASDKELFEKVSSIVSEIATLEEVFTF------ 138
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
D VE + EI+ LG + ++N A+ E I D+AT +YTSGTTG
Sbjct: 139 ---DAVE--GARGWREILSLGED------NTNQAQVDSLKEQIQPTDMATIIYTSGTTGK 187
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-A 278
PKGVML+H N++ I++ ++ VP ++GD LS LP HV+ER Y GI L + +
Sbjct: 188 PKGVMLSHDNIISNIKNCHERVPVKSGDICLSFLPVCHVFERMLTYLYQYNGIRLYFAES 247
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGI-QKQIFTSSAARRVVARALIRISFAYTAFK 337
+ ++ +P + VP V E +Y I K + S A+ + AL R+ + Y +
Sbjct: 248 FEKVAVNIGEVKPRLITVVPRVVEKVYDSIYSKGVALSGIAKSLFFWAL-RLGYQYEPY- 305
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV 397
NQK Y + L +A KL++ K + A+G +
Sbjct: 306 ----------NQKGWWYSLKL-----------------KIARKLIFSKWKKALGGQLQMI 338
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKI 455
G +L + + A G+ + GYGLTE+SPVI+ ++ +G++G PI+H E+KI
Sbjct: 339 CGSAALQPRLVRVFSAAGIPIWEGYGLTETSPVISVNCKKGHLWKIGTIGKPIDHIEVKI 398
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
AE E+L +GS +M GY+KN T A+DEDG+ +TGDIG++
Sbjct: 399 --AEDGEIL---------CKGSNIMLGYYKNEEQTHNAIDEDGFFHTGDIGFLDKE---- 443
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G L + R K+ S G+ + P +E +S I Q +V+G+ ++ P A +
Sbjct: 444 ------GFLTITDRKKEMFKTSGGKYIAPQYIENKLKQSRFIEQAMVVGEGEKMPAAFLQ 497
Query: 576 PDKEEVLMAAKRLSIVHADASELSKE-------------KTISLLYGELRKWTSKCSFQI 622
+ V KR H D LS E + + + +L KW +F +
Sbjct: 498 VNFAFVREWLKR----HGDKQTLSNEALVKDERVRERITQEVERINKKLGKWEQIKAFDL 553
Query: 623 GP 624
P
Sbjct: 554 TP 555
>gi|335043086|ref|ZP_08536113.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
gi|333789700|gb|EGL55582.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
Length = 601
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 262/562 (46%), Gaps = 81/562 (14%)
Query: 39 IRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT 98
I + +++ S Q+I + + L+ G+ P ++++L N W+ DQ L+
Sbjct: 35 INYCEQTQQWQTISWSDAAQQIAYWQQALKAEGLSPGDRVALNLKNCPEWVFFDQAALSL 94
Query: 99 GAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS 158
G I V + L I ++ L ++N +NR+ +L ++ +I+
Sbjct: 95 GLITVPLYPDDRPDSLAFILQDADVRFLLLQNHHQWNRLKPSLSEDHQLKRVII------ 148
Query: 159 SVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
A + + P DE L ++ D ++ ET D +AT +YTSGTTG
Sbjct: 149 KSADKLTLDAPAMYLDEW--LKKDIIYPLLD-------WQTET---DQLATIIYTSGTTG 196
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI---------FS 269
PKGVML+H N+L + ++ D FLS LP H ER GY++ FS
Sbjct: 197 KPKGVMLSHHNILSVASASLKHFKIQSNDLFLSFLPLSHTLERTAGYYLPMMTGSKVAFS 256
Query: 270 RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 329
RGI L +D+Q+ QP +I+VP ++E +Y + + + +R + +I
Sbjct: 257 RGIP-------QLANDIQQLQPSALIAVPRIFERIYQRLHTNVSSQPWYKRFLFLLTHKI 309
Query: 330 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 389
++Y + + R P +L+ + +KLV K +Q+
Sbjct: 310 GWSYFLYNQ-------QRRHWSPIFLLMPV------------------LDKLVAKNVQAL 344
Query: 390 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 448
G + V+GG ++P H+ + +G+ + GYGLTE+SPVI+ N SVGHPI
Sbjct: 345 FGGQLRVAVTGGAAIPHHVAEIFIGMGINLLQGYGLTETSPVISVNTLGDNQPYSVGHPI 404
Query: 449 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 508
+IKI AE +E+L V+ M GY+ N AT + +D DGWL+TGD I
Sbjct: 405 PTVKIKI--AENSELL---------VQSPGNMLGYWNNHKATAKTIDSDGWLHTGDQAEI 453
Query: 509 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 568
+ G + + GR KD +VLS GE V P ++E A L Q +++G+ +
Sbjct: 454 S----------DTGHIFITGRIKDILVLSNGEKVSPADMEMAITSDELFEQALIVGEGKP 503
Query: 569 RPGAIIVPDKEEVLMAAKRLSI 590
A+IV + E+ L+ A++L +
Sbjct: 504 FLSALIVLNAEQWLVLAQKLKL 525
>gi|383620428|ref|ZP_09946834.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|448697789|ref|ZP_21698667.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|445781155|gb|EMA32016.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
Length = 647
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 163/589 (27%), Positives = 281/589 (47%), Gaps = 73/589 (12%)
Query: 26 VFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNS 85
++ R+ D+V + + R FR +++ + + A G R +G++ +++ +FS+
Sbjct: 43 IYDRSLTDSVVS----AARPGEFRTLSYAEMRDIVRNLAAGFRELGIETGDRVGIFSNTR 98
Query: 86 CRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKA 145
W D +L+ GA+ SS +++ ++ + ++ + VEN + R+ E +
Sbjct: 99 MEWAQTDFALLSAGAVVTTVYKSSSPDQVRYLLDDPDADGVVVENGDALERVLE-VEDDL 157
Query: 146 AMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGS 204
+ FI+ + A D E+I ++ ++ +LG E AF D + + + +
Sbjct: 158 DLEFIVSI---DELSAHDDREDI--YTLADVYELGAE---AF----DEETYQGWIDEPDT 205
Query: 205 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 253
DD+A+ +YTSGTTG PKGV LTH N ++Q+R P D + +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVKLTHWNFRANVNQLRKRMAPRPDRPDDLPSIDESAQTVSYL 265
Query: 254 PPWHVYERACGYF-IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 311
P HV+ER G+F IF+ G + Y + L++D P+ SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFLIFASGGCVAYAEDPDTLQEDFSAVGPNVATSVPRVYEKIYDAIREQ 325
Query: 312 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 371
S +R+ A +D+ +L
Sbjct: 326 ASESPVKKRIFEWATD-----------------------------VGVDYQETDDPGPVL 356
Query: 372 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 430
LA++LV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE++PV
Sbjct: 357 SAKQALADRLVFSTVREALGGEIEMLISGGGSLSPELCTLYHAMGLPIYEGYGLTETAPV 416
Query: 431 IAARRPTCNVLGSVGHPINHTEIKIVDAETNE--VLPAGSKGIVKVRGSQVMQGYFKNPS 488
+A P +G++G + E+++ ++ N+ G G + V G V GY++ PS
Sbjct: 417 LAVNPPEEPKIGTIGPALPDVELRVDESVANQDAFDDPGEVGELVVTGPNVTDGYWEKPS 476
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
AT +A EDGW TGDI + P G + R K +VLSTG+NV P +E
Sbjct: 477 ATDRAFTEDGWFRTGDIVHLRPD----------GYIEFRDRVKQILVLSTGKNVAPGPIE 526
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
+A S ++ Q +V+G +++ GA++VP+ + + A I D E
Sbjct: 527 DAFAASEVVEQAMVVGDNEKFVGALLVPNTDHIREWADEEGIDLPDDPE 575
>gi|326800700|ref|YP_004318519.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326551464|gb|ADZ79849.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 633
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 253/529 (47%), Gaps = 56/529 (10%)
Query: 67 LRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVAL 126
L IG+K ++ +L +N ++ DQG+ G +NV + +I N S + +
Sbjct: 56 LLSIGLKKGDRAALLLENGPDYVYFDQGLQQIGVVNVSIYPTLPESDTEYILNDSGARTI 115
Query: 127 AVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKA 186
V P +I + + A+ II + ++ + V + +I+ G R A
Sbjct: 116 IVNTPFLLRKILKIANNCEALIRIIPTFDGYEKYTENLTLQAGVVPFAKILHDGALLRTA 175
Query: 187 FS-DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAE 244
+ D AR E I DI+T +YTSGTTG PKGVMLTH NL + +R+ D I+ +
Sbjct: 176 YEKDIASAR-----EGILMSDISTLIYTSGTTGTPKGVMLTHSNLTNNVRACLDQILEVD 230
Query: 245 NGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 302
D FLS LP HV+ER Y + + G ++ Y ++ L ++ +P + +VP + E
Sbjct: 231 QHDTFLSFLPLSHVFERTATYHVCLALGAKIAYAQSIDLLAKNMYEVKPTVICAVPRLLE 290
Query: 303 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 362
++ K S A+ + + + Y K + K+P
Sbjct: 291 KIHDKAMKNGIQSGGAKAAIFKWALLTGKQYREKKEL---------GKKPG--------- 332
Query: 363 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 421
IL + LAE+LV+ KI+ G K +SGGG+LP ++ F+ IG+K+ G
Sbjct: 333 ------PILTTQYNLAERLVFNKIKEKTGGRLKFMISGGGALPQNVGEFFGNIGIKILEG 386
Query: 422 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-----------KG 470
YGLTE+SPV+A V G+VG + EI I D E+ ++ S +G
Sbjct: 387 YGLTETSPVVAVTEFHRQVYGTVGRVLPGIEIAIQDIESLKIHTVQSHASFDPNLETEEG 446
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ +RG +M+GY+ P TK +D DGW +TGDIG + G L + R
Sbjct: 447 EIIIRGHCIMKGYWNKPEETKHVIDSDGWFHTGDIG-----------KFYKGNLKITDRL 495
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
K+ IV + G+NV P +E L+S I QI +IG ++ A+IVP++E
Sbjct: 496 KNMIVNAYGKNVYPTPVENTYLKSKRIEQIFLIGDNREYLTALIVPNQE 544
>gi|325577823|ref|ZP_08148098.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
gi|325160568|gb|EGC72694.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
Length = 605
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 284/581 (48%), Gaps = 64/581 (11%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
+A A R +I N ++ + +Q++ + ++ ++K+++F++N RW +AD
Sbjct: 20 NATALRHKI---NGLWKDISWNSFQQQLDQLSLAFLACNIQVQDKIAIFANNMSRWTIAD 76
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
L AI V + +++++ I NH++ L V + E +++ E ++ I+
Sbjct: 77 IAALQVRAITVPIYATNTAQQAEFILNHADVKILFVGDQEQYDQALEIAHQCPQLQKIVA 136
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
+ K + + E +D++I LG +A ++ A K DD+ T +Y
Sbjct: 137 M---KEQIK--LTESTLSCHWDDLIQLGTAEFQAEFETRLANK-------AMDDLFTIIY 184
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-LSMLPPWHVYERACGYFIFSRG 271
TSGTTG PKGVML + NL HQ+ + +DI N D+ LS LP H++ERA ++ RG
Sbjct: 185 TSGTTGEPKGVMLDYSNLAHQLEA-HDIALDVNQDEVSLSFLPFSHIFERAWVAYVLHRG 243
Query: 272 IELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
L Y N +++ L +P +M +VP YE +YS + ++ + R+++
Sbjct: 244 AILCYLEDTNQVREALTEVRPTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMI------FH 297
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
+A ++ ++ L++N+K P + L + LA+KLV K++S +
Sbjct: 298 WAIAVGQKRFD--LLSQNKKVPFF----------------LQKRYALADKLVLSKLRSLL 339
Query: 391 GIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G K GG L I LF+ +IG+ +++GYG+TE++ ++ S+G +
Sbjct: 340 GGRIKMMPCGGAKLEPTISLFFHSIGINIKLGYGMTETTATVSCWDDHHFNPSSIGKLMP 399
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
+ E+KI E NE+L VRGS VM+GY+K P T QA EDG+L TGD G
Sbjct: 400 NAEVKI--GENNEIL---------VRGSMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFD 448
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
G L + R K+ + S G+ + P +E + I QI +I ++
Sbjct: 449 AE----------GNLFITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAIIADAKKY 498
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 610
A+IVP + V AK+L+I + D EL K I ++ +
Sbjct: 499 VSALIVPCFDSVEEYAKKLNIKYQDRMELLKHSEIIKMFEQ 539
>gi|448320502|ref|ZP_21509989.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445605967|gb|ELY59882.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 661
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 269/569 (47%), Gaps = 83/569 (14%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
FR +++ + + A G R +GV+ +++ +F+D W D +L+ GA+
Sbjct: 61 FRAISYTQMRNVVRNLAAGFRDLGVEQGDRVGIFADTRMEWAQTDFALLSAGAVITTVYE 120
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAP 162
SS +++ ++ + ++ A+ VEN R+ E + + FI+ + + ++ V
Sbjct: 121 SSSPDQVRYLLDDPDATAVVVENERLVERVLE-VEDDLDLEFIVSMDRLEGYDDRNDV-- 177
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPK 221
+ E+ D G D D ++ ++ + DD+A+ +YTSGTTG PK
Sbjct: 178 --------LTLAEVHDRG-------EDVFDLERYEEWLDAPEMDDLASLIYTSGTTGQPK 222
Query: 222 GVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FS 269
GV LTH+N ++Q+R Y P ++ + + +S LP HV+ER G+F+ F+
Sbjct: 223 GVQLTHRNFRSNVNQVRKRYGPRPDKDDELPVIDETVQSVSYLPLAHVFERTSGHFLLFA 282
Query: 270 RGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 328
G + Y + LK+D QP SVP VYE +Y I++Q S A +R+ A
Sbjct: 283 SGACVAYAESTDTLKEDFGTVQPDTATSVPRVYEKIYDTIREQASESGAKKRIFEWA-TD 341
Query: 329 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 388
+ Y + P IL LA+KLV+ ++
Sbjct: 342 VGVEY-------------QESDDPG---------------PILSAKQSLADKLVFSNVRE 373
Query: 389 AIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
A+G + +SGGGSL + Y A+G+ + GYGLTE++PV++ P +G++G P
Sbjct: 374 ALGGEIELLISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPVVSVNPPEAPEIGTIGPP 433
Query: 448 INHTEIKIVDA--ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLN 501
+ +++I D+ E G G + V G V QGY+ P AT ++ D+DG W
Sbjct: 434 LPGVDVRIDDSLVEGETFDDPGEVGELLVSGPNVTQGYWNKPGATTESFLEDDDGSRWFR 493
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGDI + P + R K +VLSTG+NV P +E+A S ++ Q +
Sbjct: 494 TGDIVHLRPDD----------YIEFRDRVKQILVLSTGKNVAPGPIEDAFAASEVVEQCM 543
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
V+G ++ GA++VP+ + + A I
Sbjct: 544 VVGDGKKFVGALLVPNTDHIREWADEQGI 572
>gi|119357321|ref|YP_911965.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
gi|119354670|gb|ABL65541.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
Length = 610
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 281/594 (47%), Gaps = 83/594 (13%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
L++++ A L+ G+ ++++++ S+N W +AD +L GA+ V ++
Sbjct: 47 LQEDVRHCAAYLKEHGIAAKDRVAILSENRPGWYMADMAILMLGAVTVPLYPSLPPNQIE 106
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I + + + V N +I I +W K ++ IV + DE
Sbjct: 107 YILRNCGAKGIIVSNMLQLGKI-------------ISIWQKLPDLSLVIVMNRLEETIDE 153
Query: 176 IIDLGR---------ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
++DL + E + D D + DDIAT +YTSGTTG PKGVMLT
Sbjct: 154 VVDLNQVKDEGKTILEKKPWLLDGID---------VEPDDIATLIYTSGTTGLPKGVMLT 204
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKD 284
H+NL ++S ++ + D+ LS LP H YER GY++ FS G + + +V +
Sbjct: 205 HRNLCENVKSCSTVIRLDETDRSLSFLPLSHAYERTGGYYLLFSCGAAIYLAESVETVSL 264
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
++ +P + +VP +++ + + KQI SA ++ + + E F
Sbjct: 265 NIAEARPTIIFTVPRLFDRIKANTLKQIGNESAIKQKIFFWALHTG----------EEFH 314
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
N K + L + H LA+KLVY KI+ G + VSGG +L
Sbjct: 315 RQMNAKGKAALAVSMQ--------------HSLADKLVYAKIRKKFGGKLRYFVSGGAAL 360
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
P + F++A+ + + GYGLTE+SPV RP LG+VG +N+ +I+I D
Sbjct: 361 PQKVGEFFQALSINILEGYGLTETSPVTNVNRPEKIKLGTVGPAVNNVQIRIAD------ 414
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
G + ++G +M+GY+++ AT++ + +DGW +GDIG I G
Sbjct: 415 -----DGEILMKGPNIMKGYWQDEDATREVI-KDGWFYSGDIGEIDRD----------GY 458
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 583
L + R K IV S G+N+ P +E S + Q++VIG+ + A+IVPD +++
Sbjct: 459 LKITDRKKHIIVTSGGKNIAPQPIENLISESPYVDQVIVIGEKRPFLIALIVPDFSKLME 518
Query: 584 AAKRLSIVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 634
AK SI L + K I +Y +L + S+ ++ +VDE F++
Sbjct: 519 YAKENSISATTNKALIENKNIQQIYEKLMRTISRQLATHEKVRKFLLVDEAFSI 572
>gi|448725783|ref|ZP_21708221.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
gi|445797647|gb|EMA48109.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
Length = 653
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 170/580 (29%), Positives = 286/580 (49%), Gaps = 84/580 (14%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L+ + A G R +GV+ ++++ +FS + W AD +LA GA+ SS ++
Sbjct: 71 ELQSIVRSLAAGFRDLGVESDDRIGIFSASRMEWAQADFALLAAGAVVTTIYKESSPRQV 130
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++ + + + V+N + R+ + + + F+++L V+ D + VF+
Sbjct: 131 EYLLDDPGATGVIVDNRDRLERVLD-VEDALDLEFVVVL----DDVSTDRDD---VFTLA 182
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---L 231
+I + G +AF + A + + E DD+A+ +YTSGTTG PKGV ++H+N +
Sbjct: 183 DIYERGE---QAFDRA--AYERWLSERT-PDDLASLIYTSGTTGKPKGVKMSHRNFRANI 236
Query: 232 HQIRSLYDIVPAENGD--------KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRN 281
+Q+R + P ++ D LS LP HV+ER G +F+F+ G + Y +
Sbjct: 237 NQLRKRFGDRPDKSADLPSVGRETVALSFLPLAHVFERLAGHFFLFASGATVAYAESADT 296
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+ +D+Q QP SVP +YE ++ +++ S+ RR+ RA+ A KR
Sbjct: 297 VAEDIQTVQPTTATSVPRIYERIFDSMREDA-DSAIKRRIFERAV-------AAAKR--- 345
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 400
T Q P + R+ A LA++LVY ++ A+G + + +SGG
Sbjct: 346 ----TSRQDDPGRTL--------RVERA-------LADRLVYSTVKEAMGGNIEFFISGG 386
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
GSL + ++ +G+ + GYGLTE++PV++ P G++G + E K+ DA
Sbjct: 387 GSLSPELARLFDGMGLPIYEGYGLTEAAPVVSVNPPEAPKPGTLGPALTGVETKL-DAS- 444
Query: 461 NEVLPA------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
VLPA G+ G + VRG V GY++NP T A ++DGWL TGDI
Sbjct: 445 --VLPADQYDRDGTVGELLVRGPNVTDGYWENPEETDAAFEDDGWLRTGDI--------- 493
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
R G V R K +VL+TG+NV P +E++ S + Q +V+G D++ A++
Sbjct: 494 -VERDGDGYFVYHERLKQLLVLTTGKNVAPGPIEDSFATSERVEQAMVLGDDEKFVSALV 552
Query: 575 VPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 614
VP+ E + A R +I EL E+ R+W
Sbjct: 553 VPNFEGLRAWAARKNI------ELPSERAALCRDENAREW 586
>gi|456825826|gb|EMF74204.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 479
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 234/466 (50%), Gaps = 20/466 (4%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G +V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCADVPRGTDSTSDDLRYILNHAECSITFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 FDQKGT------LEDTKSFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++G
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGR 432
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 492
I +IK++D + NE+ G KGI +G VM+GY+K P K+
Sbjct: 433 CIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKRKR 478
>gi|282898836|ref|ZP_06306823.1| AMP-dependent synthetase and ligase [Cylindrospermopsis raciborskii
CS-505]
gi|281196363|gb|EFA71273.1| AMP-dependent synthetase and ligase [Cylindrospermopsis raciborskii
CS-505]
Length = 377
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 187/302 (61%), Gaps = 25/302 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEE-----KLSLFSDNSCRWLVADQGMLATGAINVVRGSR 108
++L +I FA GL+V+GV + +++L +DNS RW +ADQG++ GA+N VR S+
Sbjct: 62 TQLWDQIQRFAIGLQVLGVNKNDDAHPPRIALIADNSPRWFIADQGIMTAGAVNAVRSSQ 121
Query: 109 SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD----- 163
+ ELL+I +HS S + VE+ + N++ L + ++ +ILL + P+
Sbjct: 122 AEKNELLYIISHSGSTVVVVEDVKTLNKLEPDLA-ELPIKLVILL--SDETDMPEWNTLP 178
Query: 164 IVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
I+E V ++ ++++L +ND TIG D +AT +YTSGTTG PKGV
Sbjct: 179 IIETYLVMNFTQLLNL----------AND--HSLTPVTIGGDVLATLIYTSGTTGKPKGV 226
Query: 224 MLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 283
ML+H NLLHQ+++L IV + GD LS+LP WH YER+ YF+ S+G +YT +R +K
Sbjct: 227 MLSHNNLLHQVQTLGTIVQPQPGDVALSILPTWHSYERSGEYFLLSQGCTQIYTNLRMIK 286
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
+DL+R++P++MI+VP ++E++Y G+QKQ + A ++ + + L+++ Y +RI +G
Sbjct: 287 EDLKRFKPNFMIAVPRLWESIYEGVQKQFRSQPAKKQQLIQFLLKMGQEYIFARRIAQGL 346
Query: 344 CL 345
L
Sbjct: 347 SL 348
>gi|159466184|ref|XP_001691289.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
gi|158279261|gb|EDP05022.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
Length = 555
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 192/366 (52%), Gaps = 85/366 (23%)
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GVMLTH NL +Q+R+L + GD+ LS+LPPWH+YER C
Sbjct: 175 GVMLTHANLCYQVRNLSHFLQVRPGDRVLSLLPPWHIYERTCS----------------- 217
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
Y L SG Q+ YT +R+ +
Sbjct: 218 -------------------YFVLSSGGQQ---------------------VYTNIRRLRD 237
Query: 342 GFCLTRNQKQPSYLVAL---IDWLWARIICAI-LWPLHLLAEK---------------LV 382
P +LV + +D L AR++ I P H A LV
Sbjct: 238 DLV----AHPPDHLVCVPLVLDTLHARVVQKIQAGPRHRAAIATALLAAGAAYALASVLV 293
Query: 383 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT--CNV 440
Y+K++ A+G+ + +SGGGSL H+D FYEA+G++V G+GL+E++PV+A RR N+
Sbjct: 294 YRKVREALGVRRTVISGGGSLAAHLDDFYEALGLQVLNGWGLSETAPVLACRRAVEGQNI 353
Query: 441 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DGW 499
GSVG P T++++VD E+ LPAG +G+V RG VM GY+++P+A+ +A GW
Sbjct: 354 RGSVGVPTPGTQLRVVDPESLAPLPAGRQGLVLARGPGVMPGYWQDPAASAKAFRAGGGW 413
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 559
+TGD+GW+AP + C G LVL GRAKDT+VLS+G+NVEP +E+A S LI+
Sbjct: 414 FDTGDLGWVAPEGVPASN--CAGHLVLTGRAKDTLVLSSGKNVEPQPVEDAVAASPLIKF 471
Query: 560 IVVIGQ 565
+V++GQ
Sbjct: 472 VVLVGQ 477
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 39/50 (78%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
S+L + + DFA GL +G++P+++++LFS+NS RWLVAD ++A G ++V
Sbjct: 113 SQLYEAMQDFAAGLSGLGLQPQDRVALFSENSSRWLVADGAVMAAGGVDV 162
>gi|448711888|ref|ZP_21701431.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
gi|445790973|gb|EMA41622.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
Length = 656
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/557 (29%), Positives = 262/557 (47%), Gaps = 80/557 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +GV+ +++ +F+ W D +L+ GA+ SS ++ ++ + +
Sbjct: 76 LAAGFRELGVETGDRVGIFAQTRLEWAQTDFALLSAGAVVTTVYKSSSPDKARYLLDDPD 135
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILL-WGKKSSVAPDIVEEIPVFSY-DEIIDLG 180
+ + VEN + RI E + + FI+ + G D+ V++ DE D
Sbjct: 136 ADGVVVENADLLERILE-VEDDLDLEFIVSIDEGSGYDDRDDVYTLADVYTLGDEAFD-- 192
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
E+ + + D D DD+A+ +YTSGTTG PKGV LTH+N + +Y
Sbjct: 193 EEAYQEWVDEPDV-----------DDLASLIYTSGTTGQPKGVKLTHRNFRANVNQVYRR 241
Query: 241 V----------PAENGD-KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQ 287
V P +GD + +S LP HV+ER G+F+ F+ G + Y + LK+D
Sbjct: 242 VGPRPDKDTDTPTIDGDSRMVSYLPLAHVFERTAGHFLPFAAGATVAYAESSDTLKEDFS 301
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
QP SVP VYE +Y I++Q S R+ A T R Y+
Sbjct: 302 AVQPTGATSVPRVYEKIYDAIREQATESPIKERIFNWA--------TDVGRAYQ------ 347
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
P IL +A+KLV+ +++ A+G + + VSGGG+L
Sbjct: 348 RADDPG---------------PILEAKLSIADKLVFGQVKDALGGNIEMLVSGGGTLSPD 392
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP- 465
+ Y +G+ + GYGLTE++PV+ P +G+VG P+ E+++ D+ V+P
Sbjct: 393 LCTLYHGMGLPIFEGYGLTETAPVVTTNPPERPQIGTVGPPVVGCEVRVDDS----VVPD 448
Query: 466 ------AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
AG G + VRG V +GY++ P AT +A DGW TGDI I P
Sbjct: 449 GEAADTAGETGELLVRGPNVAEGYWEKPGATDRAFTADGWFRTGDIVTIRPDD------- 501
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+V R K +VLSTG+NV P +E++ + Q +V+G ++ GA+IVP+ +
Sbjct: 502 ---YIVFHERRKQLLVLSTGKNVAPAPIEDSFAAREPVEQCMVVGDGEKFVGALIVPNVD 558
Query: 580 EVLMAAKRLSIVHADAS 596
+ A+ I D++
Sbjct: 559 ALRRLAEDEGIDLPDSA 575
>gi|78189102|ref|YP_379440.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
gi|78171301|gb|ABB28397.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
Length = 610
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 171/587 (29%), Positives = 280/587 (47%), Gaps = 74/587 (12%)
Query: 57 EQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLH 116
EQ++ F L+ GV +++++ S+N W +AD +L GAI V + ++ +
Sbjct: 51 EQKLQAF---LKQRGVTANDRVAILSENRPAWYLADMAILNLGAITVPLYPSLPANQIEY 107
Query: 117 IYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
I N+ + A+ V N ++I + FI++L + + + +
Sbjct: 108 ILNNCSAKAVIVSNSLQLSKILSIRNQLTSCEFIVMLNRQTEQI-------------EGV 154
Query: 177 IDL--GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
DL +E K +N + DD+AT +YTSGTTG PKGVMLTH+NL +
Sbjct: 155 TDLNHAKEEGKKLLAANPS--FLTPSPAKPDDVATIIYTSGTTGLPKGVMLTHRNLCENV 212
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPH 292
+S ++ D LS LP H YER GY++ F+ G ++ + ++ + ++ +P
Sbjct: 213 KSCSTVLELNESDCALSFLPLSHAYERTGGYYLLFACGTQIYIAESIETVSLNMSEVKPT 272
Query: 293 YMISVPLVYETLYSGIQKQIFTSSA-ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+ +VP +++ + + + KQI A+++ AL Q
Sbjct: 273 IIFTVPRLFDRIRAILLKQIGEQPPPAQKLFEWAL----------------------QTG 310
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
Y AL A + A+ H LA +L+YKKI +G + VSGG +LP I F
Sbjct: 311 EEYYQALSSCGSAPPLLAMQ---HNLASQLIYKKIHQKMGGRLRYFVSGGAALPQKIGEF 367
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++A+ V + G+GLTE+SPV RP G+VG IN+ E +I AE E+L
Sbjct: 368 FQALDVPILEGFGLTETSPVTHVNRPEKIKYGTVGKAINNVETRI--AEDGEIL------ 419
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
++G +M+GY+ + AT++ L +DGW TGD+G I G L + GR
Sbjct: 420 ---LKGPNIMKGYWNDEEATREVL-KDGWFYTGDLGEI----------DSDGYLKITGRK 465
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
K IV S G+N+ PL +E + I Q++VIG+ + A+IVP + A++ SI
Sbjct: 466 KHIIVTSGGKNIAPLPIENLIAENPFIGQVLVIGEKRPFLVALIVPAFPHLQAHARKESI 525
Query: 591 VHADASELSKEKTISLLYGELRKWTS---KCSFQIGPIHVVDEPFTV 634
EL + K + +Y EL + S +I +++ PFT+
Sbjct: 526 QATTNRELMEHKKVQQIYEELLRTISMQLATHEKIRKFILIENPFTI 572
>gi|389847450|ref|YP_006349689.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|448617228|ref|ZP_21665883.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|388244756|gb|AFK19702.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|445748577|gb|EMA00024.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
Length = 667
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 254/552 (46%), Gaps = 72/552 (13%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
N F K+ + + A G R +G++ +++ +F+ W D +L G +
Sbjct: 59 NGVFSDVTYEKMRDIVRNLAAGFRDLGMETGDRVGIFAHTRMEWAQTDFAVLGAGGVVTT 118
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
+ SS ++ ++ + + A+ VEN E R+ + +RFI+ +
Sbjct: 119 VYTSSSERQVRYLLSDPGANAVVVENQELLERVL-AVEDDLDLRFIV------------V 165
Query: 165 VEEIPVFS-YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
++E + D+I+ LG R ++A + DD+A+ +YTSGTTG PKG
Sbjct: 166 IDEYEGYDDRDDILTLGEVHRHGEEVFDEAEYESWLDARDPDDLASLIYTSGTTGQPKGA 225
Query: 224 MLTHKNLLHQIRSLY---------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGI 272
LTH N + Y PA + D LS LP HV ER G+F+ F+ G
Sbjct: 226 QLTHWNFRSNVNESYRRFGPRPNKSDAPAVSPDSVSLSFLPLAHVLERMAGHFMMFAAGA 285
Query: 273 ELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ Y + L++D Q QP SVP VYE LY I+ Q S +R+ A + +
Sbjct: 286 TVAYAESPDTLREDFQLVQPTAGTSVPRVYEKLYDAIRAQASESPVKKRIFEWA-VDVGQ 344
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y P YL++ H +A++LV+ +++ A+G
Sbjct: 345 EY-------------HTTDSPGYLLSA---------------KHRVADRLVFDQVREALG 376
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
+ + +SGGGSL + Y A+G+ + GYGLTE+SPVI P +G++G+P+
Sbjct: 377 GNIEFFISGGGSLSAELCALYHAMGLPIFEGYGLTETSPVITVNPPEAPKIGTIGYPLRE 436
Query: 451 TEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGD 504
EIK+ + L G G + VRG V GY+ P T++A ED W TGD
Sbjct: 437 VEIKLDKTVVGDQLGDAGGEVGELLVRGPNVTPGYWNRPEETEEAFVEDDEGNRWFRTGD 496
Query: 505 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 564
+ RR G + RAK +VLSTG+NV P +E+A S+++ Q +V+G
Sbjct: 497 V----------VERRPDGYIAFRERAKQILVLSTGKNVPPGPIEDAFASSTVVEQCMVLG 546
Query: 565 QDQRRPGAIIVP 576
++ A+IVP
Sbjct: 547 DGRKFISALIVP 558
>gi|345428592|ref|YP_004821708.1| hypothetical protein PARA_00020 [Haemophilus parainfluenzae T3T1]
gi|301154651|emb|CBW14110.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 605
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/579 (28%), Positives = 280/579 (48%), Gaps = 64/579 (11%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
+A A R +I N ++ + +Q++ + ++ ++K+++F+ N RW +AD
Sbjct: 20 NATALRHKI---NGLWKDISWNAFQQQLDQLSLAFLACNIQVQDKIAIFAHNMSRWTIAD 76
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
L AI V + +++++ I NH++ L V + E + + E ++ I+
Sbjct: 77 IAALQVRAITVPIYATNTAQQAEFILNHADVKILFVGDQEQYEQALEIAHQCPQLQKIVA 136
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
+ K + + E +DE+I LG +A ++ A K DD+ T +Y
Sbjct: 137 M---KEQI--QLTETTLSCYWDELIQLGAAEFQAEFETRLANK-------TMDDLFTIIY 184
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-LSMLPPWHVYERACGYFIFSRG 271
TSGTTG PKGVML + NL HQ+ + +DI N D+ LS LP H++ERA ++ RG
Sbjct: 185 TSGTTGEPKGVMLDYNNLAHQLEA-HDIALDVNQDEVSLSFLPFSHIFERAWVAYVLHRG 243
Query: 272 IELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
L Y N +++ L +P +M +VP YE +YS + ++ + R+++
Sbjct: 244 AILCYLEDTNQVRETLTEVRPTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMI------FH 297
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
+A ++ +E L++N+K P + L + LA+KLV K++S +
Sbjct: 298 WAIAVGQKRFE--LLSQNKKVPFF----------------LQKRYALADKLVLSKLRSLL 339
Query: 391 GIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G K GG L I LF+ +IG+ +++GYG+TE++ I+ S+G +
Sbjct: 340 GGRIKMMPCGGAKLEPTIGLFFHSIGINIKLGYGMTETTATISCWDDHHFNPNSIGKLMP 399
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
+ E+KI E NE+L VRG VM+GY+K P T QA EDG+L TGD G
Sbjct: 400 NAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFD 448
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
G L + R K+ + S G+ + P +E + I QI +I ++
Sbjct: 449 AE----------GNLFITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAIIADAKKY 498
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
A+IVP + V AK+L+I + D EL K I ++
Sbjct: 499 VSALIVPCFDSVEEYAKKLNIKYQDRMELLKHSEIIKMF 537
>gi|346226769|ref|ZP_08847911.1| amp-dependent synthetase and ligase [Anaerophaga thermohalophila
DSM 12881]
Length = 639
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/561 (28%), Positives = 279/561 (49%), Gaps = 63/561 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+R+ RFR + + ++ GL +GV+ ++++L S+ WL+++ +L GAIN
Sbjct: 24 KRDGRFRSMTYKETHERVITLTSGLLALGVEKGDRIALLSEGRNDWLISELAILRCGAIN 83
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V ++ + ++++ HSES + V + ++I + + + II+ + + ++
Sbjct: 84 VPLSTKLGADQDMIFRLVHSESKMILVSGYQL-HKIRQIIDELPGVEKIIV-FDDVTELS 141
Query: 162 PDIVEEIPVFSY-DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
P V V++ ++ + + RE +A RK Y +DIA YTSGTT P
Sbjct: 142 PKEVLLSDVYAAGNDFLKINREKTEA------RRKEVHY-----NDIANISYTSGTTARP 190
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFS-RG-----IEL 274
KG+ML+H+N + + + + L +LP H + + F RG +E
Sbjct: 191 KGIMLSHRNYTANVEQAFSYIDIPAHYRTLVVLPWDHAFAHTAALYAFMYRGASIASVEA 250
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ ++ QPH ++SVP + + I+K + A+ A L +I+
Sbjct: 251 GKTQIETLKNFASNILEIQPHVLMSVPAIAKNFRKNIEKGVM----AKGKTANTLFKIAM 306
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y + Y G T N + + + + +PL+ L + +++K I+S G
Sbjct: 307 KYAIW---YNG---TGNNR-------------GKGLKKLTYPLYQLFDNILFKTIRSGFG 347
Query: 392 ISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
+ GGG+L + IDL F+ A+G+ + GYGL+E++P+I+A P + +GS G +N
Sbjct: 348 GNLQFFIGGGAL-LDIDLQKFFYALGIPMYQGYGLSEAAPIISANTPDHHKMGSSGRVVN 406
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
+ EIKI D E NE LP G G + V+G VM GY+KN ATK+ + +DGWL TGD+G++
Sbjct: 407 NLEIKICDEEGNE-LPNGRSGEIVVKGENVMPGYWKNEEATKETI-KDGWLYTGDLGYLD 464
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQR 568
G L + GR K ++ S GE P +EEA + LI Q V+
Sbjct: 465 HE----------GYLYVLGRFKSLLIGSDGEKYSPEGIEEAVIDHCPLIDQFVLHNNQNP 514
Query: 569 RPGAIIVPDKEEVLMAAKRLS 589
+IVP++E+++ K L
Sbjct: 515 YTVGLIVPNQEKIIQFFKSLD 535
>gi|345304087|ref|YP_004825989.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113320|gb|AEN74152.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 633
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 293/619 (47%), Gaps = 67/619 (10%)
Query: 38 RIRISRRNHRFRVFCE---SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQG 94
R +S ++ R + + + +LEQ + A L GV+ +++++ S+N W + D
Sbjct: 26 RPALSYKDRRTKTWVDITWEELEQHVHAMAGYLHKRGVRSGDRVAILSENRPEWAITDLA 85
Query: 95 MLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAA-MRFIILL 153
G +NV + + ++ +I S + L V + R AET+ + ++ I+ L
Sbjct: 86 TQILGGVNVALYTSLPASQVGYIVRDSGARILVVSSAVQL-RKAETIFDECPELQEIVTL 144
Query: 154 WGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 213
+ P V ++D+++ G A+ ++A E + DD++ +YT
Sbjct: 145 SEMRKDHPPY------VRAWDDVLAEG----AAYWAEHEAELSKLAEQVQPDDLSALIYT 194
Query: 214 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGI 272
SGTTG PKGVMLTH+N +++ V D LS LP H +ER GY + + G
Sbjct: 195 SGTTGLPKGVMLTHRNFCANVQAALQRVDFGPADHHLSFLPLCHSFERTAGYTAVLACGA 254
Query: 273 ELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ Y ++ L +L +P MISVP ++E +Y+ I K + S + ++ + + +
Sbjct: 255 RISYAESIEALSQNLLEVRPTVMISVPRLFERVYNAIHKSVEKSPSLQQKIFHWAVGVGR 314
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
A + L R +L H LA +LV++K+ +G
Sbjct: 315 RMAACR------------------------LEGRTPGPVLQLQHRLAHRLVFQKLHDRLG 350
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI-- 448
+ + VSGG +LP HI F+ AIG+ + GYGLTE++PV+ P G+VG +
Sbjct: 351 GNLRFAVSGGAALPRHIGEFFLAIGLTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPG 410
Query: 449 ------NHTEIKIVDAETNEVLPAG---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 499
T+ KIV + + P+ +G + V+G VM+GY+ N AT++ D DGW
Sbjct: 411 VTIAIQRLTDGKIVGQLSGDDYPSDLTTEEGEILVKGPNVMKGYWNNEEATREVFDADGW 470
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 559
+TGD+G R G LV+ R K IV G+N+ P +E+ + I Q
Sbjct: 471 FHTGDVG-----------RFDQGYLVITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQ 519
Query: 560 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA-DASELSKEKTISLLYGELRKWT--S 616
IVVIG+ + A+IVPD E + A+ ++ A D + L+ + +L LR++ +
Sbjct: 520 IVVIGEGREFLTALIVPDFEALRQYAQEHNLQAASDEALLALPEIRALFEQSLRRYNRHA 579
Query: 617 KCSFQIGPIHVVDEPFTVN 635
+I ++ EPFT+
Sbjct: 580 PAHERIRAFRLLSEPFTIE 598
>gi|456888179|gb|EMF99172.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 485
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 234/450 (52%), Gaps = 53/450 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+L ++ + AE L +GV+ ++++ LF+DN W++AD G++ TGA +V RG+ + E
Sbjct: 37 SQLYEQGIQLAEALIELGVQQKQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSE 96
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+++I NHSE + +EN + + ++ +I++ +S +P +++
Sbjct: 97 IVYILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMM--DSTSTSPGVLK------M 148
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N++HQ
Sbjct: 149 QDLIEKGKKLRTGGSRKAEER----VSAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQ 204
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 293
I+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL +P +
Sbjct: 205 IKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATVKPTF 264
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCLTRNQ 349
M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 265 MGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEVDYTG 323
Query: 350 KQPSY-----LVALIDWL----------------------------WARIICAILWPLH- 375
+ P + ++ I +L + +I + L+
Sbjct: 324 RNPIWSFFYGILMFIQFLLTGPFTLTVFAGGLGAYFAGTELYYLTSFFYVIAGLALLLNS 383
Query: 376 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 434
+K+V KI++A G KA +SGGG LP H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 384 FTLDKIVLAKIRAATGGQLKASISGGGGLPRHVDEFFGNIGINVLEGYGMTETSPVISVR 443
Query: 435 RPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
++GSVG T+++I ++ N VL
Sbjct: 444 TFEKLIIGSVGVIAPKTKLQI-RSDNNAVL 472
>gi|114778103|ref|ZP_01452990.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
gi|114551521|gb|EAU54075.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
Length = 592
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 167/531 (31%), Positives = 256/531 (48%), Gaps = 88/531 (16%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++Q +L A L +GV P +++ + N W +AD +L GA+ V
Sbjct: 52 VQQAVLRVAAWLEAMGVTPGDRVGILGHNCPEWYIADFAILRLGAVTV------------ 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETL---CSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
P +F AE++ + AA+ I + G++ S + IP +
Sbjct: 100 ---------------PAYFTDPAESVQYVFADAAVSVIFVEEGEQQSKLAGM--NIPSLT 142
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSD--DIATYVYTSGTTGNPKGVMLTHKNL 230
+ E + S + DAR + + D D+AT +YTSGTTG+PKGVMLTH NL
Sbjct: 143 FHG------EQQSIASIAADARWDNRLKAACPDREDLATLIYTSGTTGHPKGVMLTHGNL 196
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELMYT-AVRNLKDDLQR 288
L + + VP D FLS LP H +ER G+F+ S G + Y +V L D+
Sbjct: 197 LADVEAGIGGVPVFADDLFLSFLPASHAFERTVGHFLPSACGAGIAYAESVTTLLRDMPE 256
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P MISVP +YE +Y+G+ ++ SA V+R L R++ +R+ G
Sbjct: 257 VRPTLMISVPRLYEKIYAGVDAKLAAGSA----VSRWLFRLA------QRL--GLNRFNR 304
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
++Q L A+ WLWA L ++LV+ +++ +G +A VSGG +L I
Sbjct: 305 RRQGDDLSAVAAWLWA------------LLDRLVHARLREKMGGRIRAFVSGGAALHPDI 352
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
F A + V GYGLTE+SPV++ R G+VG + E+K AE E+L
Sbjct: 353 ARFLLAADIIVLPGYGLTETSPVLSVNRQAYIKPGTVGPALPGVELKC--AEDGELL--- 407
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
V+G VMQGY++ P AT +A D DGWL TGDI I G + +
Sbjct: 408 ------VKGPMVMQGYWQQPLATAEAFDADGWLRTGDIVTI----------DGDGYITIM 451
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
R K+ +VLS GE + P +E+ + ++Q++VI + A++V D+
Sbjct: 452 DRKKEIMVLSNGEKLSPAVIEQHIAANPCVQQVMVIADQRPFVTALVVVDQ 502
>gi|365876500|ref|ZP_09416021.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442586511|ref|ZP_21005339.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
gi|365755812|gb|EHM97730.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442563735|gb|ELR80942.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
Length = 588
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 270/587 (45%), Gaps = 104/587 (17%)
Query: 64 AEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ GL +G+KP +K+ L S +N W + D GM G I+V S E+ +I+N++E
Sbjct: 47 SRGLIKLGIKPGDKIGLISHNNRTEWAIMDIGMSQIGVISVPVYPTISEEDYEYIFNNAE 106
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD-------- 174
V + E +N++ SV P + + VF++D
Sbjct: 107 IKYCFVSDKELYNKLI--------------------SVQPKVSSLMGVFAFDDVKGAPNW 146
Query: 175 -EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
EI+DLG + DS + I +DDIAT +YTSGTTG PKGV LTH+N++
Sbjct: 147 KEILDLGED------DSTQSEIEDIANIIKTDDIATLIYTSGTTGRPKGVALTHENIVSN 200
Query: 234 IRSLYDIVPAENGD----KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQR 288
+ + +P D K LS LP HV+ER Y G + + ++ + D+L+
Sbjct: 201 VLNSNPRIPDVKLDYKEMKCLSFLPLCHVFERMLLYLYQHNGYSIYFAESIDKVGDNLKE 260
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P +M VP + E +Y +I+ + A+ + + + + + E + L ++
Sbjct: 261 VKPQFMTVVPRLVEKVYD----KIYNTGASAGGMKTKIFLWALS------LVEDYELGKS 310
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+ + W+ A+KLV+ K + +G + A VSG +L +
Sbjct: 311 -------MGIKGWI---------------ADKLVFSKWREGLGGNIVALVSGSAALSPRL 348
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ + G+ + GYGLTE+SPVIA G+VG PI + E+KI AE E+L
Sbjct: 349 NRIFHGAGIPILEGYGLTETSPVIAVNSFKHRKFGTVGWPIENAEVKI--AEDGEIL--- 403
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
V+G+ V +GY+ + TK+A EDG+ TGDIG+I G L +
Sbjct: 404 ------VKGTSVFKGYYMDEEKTKEAFTEDGYFKTGDIGFIDDE----------GFLKIT 447
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
R K+ S G+ + P +E A S I QI+VIG ++ P A I PD E V A+R
Sbjct: 448 DRKKEMFKTSGGKYIAPQVIENNAKASKFIEQIMVIGDGEKMPAAFIQPDFEFVKAWAER 507
Query: 588 L------SIVHADASELSKEK---TISLLYGELRKWTSKCSFQIGPI 625
S A+E K++ I L L KW F++ PI
Sbjct: 508 KGLNIGSSYAEIAANEDVKQRIAQEIEALNKHLGKWEQIKKFELTPI 554
>gi|21673982|ref|NP_662047.1| long-chain-fatty-acid-CoA ligase [Chlorobium tepidum TLS]
gi|21647127|gb|AAM72389.1| long-chain-fatty-acid--CoA ligase, putative [Chlorobium tepidum
TLS]
Length = 649
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 168/606 (27%), Positives = 292/606 (48%), Gaps = 77/606 (12%)
Query: 41 ISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
I+R+ N + L ++ FA L+ G++P +++++ S+N W +AD +L+ G
Sbjct: 71 IARKINGAYSPISYDSLAEDCRHFAAYLKERGIEPGDRVAILSENRPGWYLADIAILSLG 130
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
A +V ++ +I N+ + + V N +I + +I++
Sbjct: 131 ATDVPLYPSLPPNQIEYILNNCSAKGIIVSNMLQLGKILSIWPKLPELNMVIVM------ 184
Query: 160 VAPDIVEEIPVFSYDEIIDLGR---ESRKAFSDSNDARKHYKYETIGS--DDIATYVYTS 214
+ ++E PV +++IDL + E +K K + + I S DD+AT +YTS
Sbjct: 185 ---NKLDE-PV---EDVIDLSQAKTEGKKVLE-----AKPWLLDGIKSNPDDVATLIYTS 232
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIE 273
GTTG PKGVMLTH+N+ ++S ++ + D LS LP H YER GY++ F+ G
Sbjct: 233 GTTGLPKGVMLTHRNICENVKSCSTVIRIDQTDSSLSFLPLSHAYERTGGYYLMFACGAR 292
Query: 274 L-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
+ + +V + ++ +P + +VP +++ + + I K + + + +I F
Sbjct: 293 INLAESVETISLNISEAKPTIIFTVPRLFDRMKASILKSVTSEGGVKE-------KIFFW 345
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+ Y KQ L + +L H LA+KLVY KI+ G
Sbjct: 346 AVSTGEKY--------HKQ----------LATGKVSPLLAVQHNLADKLVYSKIRKKFGG 387
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ VSGG +LP F+++IG+ + G+GLTE+SPV RP G+VG P+ +
Sbjct: 388 KLRYFVSGGAALPQKTGEFFQSIGITILEGFGLTETSPVTNVNRPEKVKFGTVGLPVKNV 447
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
E+KI G + ++G +M+GY+K+ +A+ + L DGWL TGDIG +
Sbjct: 448 EVKI-----------APDGEIMLKGPNIMKGYWKDEAASAEVL-RDGWLYTGDIGEVDSE 495
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
G L + R K IV S G+N+ PL++E L S + Q +++G+ +
Sbjct: 496 ----------GYLKITDRKKHIIVTSGGKNIAPLQIENLILDSPYVDQAMIVGEKRPFLI 545
Query: 572 AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVV 628
A+IVPD ++ A I + EL K + +Y +L K S+ ++ ++
Sbjct: 546 ALIVPDFLKLRDFAAEHQIKASSTKELINTKEVIEVYEKLLKSISRQLATHEKVRKFLLL 605
Query: 629 DEPFTV 634
+EPF++
Sbjct: 606 EEPFSI 611
>gi|408370751|ref|ZP_11168525.1| long-chain-fatty-acid--CoA ligase [Galbibacter sp. ck-I2-15]
gi|407743743|gb|EKF55316.1| long-chain-fatty-acid--CoA ligase [Galbibacter sp. ck-I2-15]
Length = 590
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 172/599 (28%), Positives = 272/599 (45%), Gaps = 86/599 (14%)
Query: 42 SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGA 100
++ N+++ + GL +GV P +K+++ S +NS W +AD G+L TGA
Sbjct: 26 TKHNNKWETISSQNYVDRANQLSRGLLRLGVHPNDKIAIISHNNSADWNIADIGILQTGA 85
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFF---NRIAETLCSKAAMRFIILLWGKK 157
NV S+E+ L+I NHS++ V + E N I + + S + L G K
Sbjct: 86 HNVPIYPTISAEDYLYILNHSDAKYCIVSDMEILEKLNSIKDKVTSLKEVYSFRDLDGVK 145
Query: 158 SSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTT 217
S E+ +LG++ SN + + + DD+AT +YTSGTT
Sbjct: 146 S--------------LSEVYNLGKDQ------SNQQEVQSRMDAVSPDDLATLIYTSGTT 185
Query: 218 GNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT 277
G PK VML+H N++ + + VP GDK LS LP H++ER Y GI + +
Sbjct: 186 GKPKAVMLSHNNIVSNVLGSEERVPLSEGDKALSFLPICHIFERMVVYLYQYCGISIHFA 245
Query: 278 -AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
++ + D+L+ +PH M VP + E ++ I + S ++ + I + AY +
Sbjct: 246 ESIDKMSDNLKEVRPHVMTVVPRLIEKVFDKIHAKGSELSGIKKKLFFWAIELGEAYQPY 305
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 395
A W ++ +A KL++ K Q +G + K
Sbjct: 306 G-------------------ANGSWYEFKL---------KIARKLIFSKWQEGLGGNLKI 337
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN--VLGSVGHPINHTEI 453
VSG +L + + A + V GYGLTE+SPVIA +G+VG + + E+
Sbjct: 338 LVSGSAALQPRLARIFGAADIPVMEGYGLTETSPVIAVNDQNNRGWKIGTVGRMLPNVEV 397
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
KI AE E+L +G +M GY+K+ TK+ +D D + +TGDIG I
Sbjct: 398 KI--AEDGEIL---------CKGPNIMLGYYKDEEKTKEVMDGD-YFHTGDIGQIDQE-- 443
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G L + R K+ S G+ V P +E +S I QI+V+G+ ++ P A
Sbjct: 444 --------GFLKITDRKKEIFKTSGGKYVAPQMIENQMKQSRFIEQIMVVGEGEKMPCAF 495
Query: 574 IVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
I P+ E V AKR I A+ EL K EK ++ + +W F++ P
Sbjct: 496 IQPNFEFVNKWAKRQKIDIANNKELVKNPKVIERIEKEVAKYNKQFGRWEQVKKFELTP 554
>gi|282896867|ref|ZP_06304873.1| AMP-dependent synthetase and ligase [Raphidiopsis brookii D9]
gi|281198276|gb|EFA73166.1| AMP-dependent synthetase and ligase [Raphidiopsis brookii D9]
Length = 377
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 198/340 (58%), Gaps = 39/340 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEE-----KLSLFSDNSCRWLVADQGMLATGAINVVRGSR 108
S+L +I FA GL+V+G+ +++L +DNS RW +ADQG++ GA+N VR S+
Sbjct: 62 SQLWDQIQRFAIGLQVLGINKNNDSYPPRIALIADNSPRWFIADQGIMTAGAVNAVRSSQ 121
Query: 109 SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD----- 163
+ ELL+I +HS S + VE+ + N++ L + ++ +ILL + P+
Sbjct: 122 AEKNELLYIISHSGSTVVVVEDVKTLNKLEPDL-GELPIKLVILL--SDETDMPEWNTLP 178
Query: 164 IVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYE--TIGSDDIATYVYTSGTTGNPK 221
I+E V ++ ++++L +Y TIG D +AT +YTSGTTG PK
Sbjct: 179 IIETYSVMNFTQLLNLAN--------------NYTLTPLTIGGDALATLIYTSGTTGKPK 224
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GVML+H NLLHQ+++L IV + GD LS+LP WH YER+ YF+ S+G +YT +R
Sbjct: 225 GVMLSHNNLLHQVQTLGTIVQPQPGDVALSILPTWHSYERSGEYFLLSQGCTQVYTNLRM 284
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+K+D ++++P++MI+VP ++E++Y G+QKQ A ++ + + L+++ Y +RI +
Sbjct: 285 IKEDFKKFKPNFMIAVPRLWESIYEGVQKQFRGQPAKKQKLIQFLLKMGEEYIFARRIAQ 344
Query: 342 GFCLTRNQKQPSYLVALIDWL-W-ARIICAILWPLHLLAE 379
G L + +W+ W A+I +L PL +L +
Sbjct: 345 GLSLEH--------IGASEWIKWAAKIKQLVLLPLQILGK 376
>gi|227540636|ref|ZP_03970685.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239498|gb|EEI89513.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 591
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 164/569 (28%), Positives = 275/569 (48%), Gaps = 79/569 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+R +++ + + + I + ++ + GVK ++++L S N W D GA
Sbjct: 27 KREGKWKTYSTDEFIEIIDNISKAMLARGVKKGDRIALMSGNRPEWNFVDFAANQIGAAI 86
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V SS++L +I +E ++ V N E ++ L K++++
Sbjct: 87 VPLYPTLSSQDLTYIIADAEVRSIFVSNAELTGKVKTAL--------------KENNL-- 130
Query: 163 DIVEEIPVFSYDEIIDLGR-ESRKAFSDSNDAR-KHYKYETIGSDDIATYVYTSGTTGNP 220
EI +F++++I DL + AF D K YK + + DD+ T +YTSGTTG P
Sbjct: 131 ----EINLFTFEKIDDLPTLDDVIAFGKEQDIDLKPYK-DAVSEDDLLTLIYTSGTTGKP 185
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-V 279
KGV+LTHKN++ + + ++ E +K LS LP H++ER Y FSRG+++ Y +
Sbjct: 186 KGVLLTHKNVMSNVNASNHLLKTEY-NKALSFLPLCHIFERMVVYLYFSRGVQIYYAENL 244
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
N+ D+ +P +VP V E +Y I ++ +AL I A
Sbjct: 245 DNIVADINEVKPMAFTTVPRVLEKVYDKIVEK-----------GKALTGIKKAL-----F 288
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAEKLVYKKIQSAIGIS-KAGV 397
+ L ++P + L L +A KL++ K + A+G K V
Sbjct: 289 FWALELGHKYQEPEK-------------NGAFYNLKLGIARKLIFSKWKEALGGEIKLIV 335
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKI 455
SGG +L + + A G++V GYGLTE+SPVIA +P G+VG +++ ++KI
Sbjct: 336 SGGAALQERLARVFWAAGIQVLEGYGLTETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKI 395
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
G G + V+G + GY+KN ATK+A+DE+G+ +TGDIG ++
Sbjct: 396 -----------GQDGEILVKGPSITAGYYKNEEATKEAIDEEGYFHTGDIGELSKD---- 440
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G L + R K+ + G+ V P LE + S+LI Q++V+G++++ P A+IV
Sbjct: 441 ------GFLKITDRKKEMFKTAGGKYVAPQVLENKFMESTLIGQVMVLGENRKFPSALIV 494
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTI 604
P EE+ K I + E+ K+ +
Sbjct: 495 PAFEELEKWCKHKGIAYTSKDEIIKDPKV 523
>gi|398345391|ref|ZP_10530094.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 645
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 264/552 (47%), Gaps = 29/552 (5%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +K+ L DN W + ++ G ++V RG +S+E++ +I H+++ + +E
Sbjct: 59 GLRRGDKVGLICDNRTEWSLCSFSIVCAGGVDVPRGCDASAEDITYILTHTDAKIVFLEK 118
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR---ESRKAF 187
++++ +A+ +I++ + S + + F E++ L + +
Sbjct: 119 NSVLKKLSKHPDCLSAIEVLIVI--EDESTFEGLSQIRSQFPKLEVLGLDKALSSGEQYL 176
Query: 188 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 247
S E++ DIAT +YTSGTTG PKGV+L H++ ++ L VP D
Sbjct: 177 SKKGPEVLRQAGESLTGKDIATIIYTSGTTGVPKGVVLKHRSFTWSVQELQQFVPVTYSD 236
Query: 248 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 307
+ + LPPWH+ ER + S G + + V NL+ D QP ++SVP V+E LY
Sbjct: 237 RTVVFLPPWHIAERILETALLSWGASMASSNVTNLQRDFGLIQPTVLVSVPRVWEALYRK 296
Query: 308 IQKQIFTSSAARRVVARALIRIS-FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
I + + V ++I+ F + + I + T + +PS AL + +
Sbjct: 297 IWDTAKKGPSWKFKVFSLAVKIAEFHSSLYDTITGNYATTED--EPSDQKALDKF----V 350
Query: 367 ICAILWPL---HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
A P+ +LL++K++ S G + G G++P I F+ ++G+ + YG
Sbjct: 351 ALAFFGPVSLANLLSQKILQPVRASLGGRLRFAFCGAGAMPSKIQFFFRSLGIPIIETYG 410
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE++ + A R G++G IK++D + +G KG +G V GY
Sbjct: 411 MTETTGMGAMGRFPIPKTGAIGPVFPGAHIKLLDETGTVITESGIKGTAWHKGPHVTSGY 470
Query: 484 FKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
+K+ +L D W ++GD+ W G L GRAKDTIVLS+GENV
Sbjct: 471 YKDEEKNTASLI-DNWFDSGDLFVWTKT-----------GELKFAGRAKDTIVLSSGENV 518
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKE 601
EP +E S I+ IVV+GQD++ A+IVP+ E++ AK + +E+
Sbjct: 519 EPEPIEAKISESEFIQFIVVVGQDRKFLNALIVPNFEKLREKFAKSGQTLPEANTEIVTN 578
Query: 602 KTISLLYGELRK 613
T+ Y EL K
Sbjct: 579 PTVLKFYKELLK 590
>gi|390955718|ref|YP_006419476.1| AMP-forming long-chain acyl-CoA synthetase [Aequorivita
sublithincola DSM 14238]
gi|390421704|gb|AFL82461.1| AMP-forming long-chain acyl-CoA synthetase [Aequorivita
sublithincola DSM 14238]
Length = 593
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 170/558 (30%), Positives = 268/558 (48%), Gaps = 78/558 (13%)
Query: 58 QEILDFAE----GLRVIGVKPEEKLSLFSD-NSCRWLVADQGMLATGAINVVRGSRSSSE 112
QE LD A L + VKP +K++L S N W + D G++ TGA +V S E
Sbjct: 38 QEYLDKANQISRALIEMDVKPNDKVALISTTNRTEWNICDIGIMQTGAQDVPVYPTISQE 97
Query: 113 ELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
E ++ NHSE+V V + E ++++ + +++ + D +E + +S
Sbjct: 98 EYEYVLNHSEAVYCFVSDKEVYDKVMAIKANVPSLKEVYSF---------DQIEGVKNWS 148
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
E+++ G++++ + D RK I DD+AT +YTSGTTG PKGVML+HKN+
Sbjct: 149 --EVLETGKDTKN--QEELDKRKA----AISEDDVATLIYTSGTTGKPKGVMLSHKNIAT 200
Query: 233 QIRSLYDIVPAENG-DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 290
+ + +P + G LS LP HVYER Y G+E+ Y ++ + D+L+ +
Sbjct: 201 NAKFSAERLPIDMGKSSSLSFLPVCHVYERMLLYMYQYCGVEIYYAESLDTISDNLKEVK 260
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP V E +Y I + + ++ + I + Y + G+ K
Sbjct: 261 PEVMTAVPRVLEKVYDKIYAKGGELTGIKKKLFFWAIELGLKYEPYGE--NGWWYETQLK 318
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
LA KL++ K + A+G + KA SG L +
Sbjct: 319 --------------------------LANKLIFSKWREALGGNLKAIASGSAPLQPRLAR 352
Query: 410 FYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ A G+ V GYGLTE+SPV++ R +G+VG P+ TE+KI AE E+L
Sbjct: 353 VFNAGGIPVMEGYGLTETSPVVSVNDMRNHGFKIGTVGKPLRETEVKI--AEDGEIL--- 407
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
V+G QVM GY+KN T + L +DG+ +TGDIG I G L +
Sbjct: 408 ------VKGPQVMIGYYKNQEQTDEVL-KDGYFHTGDIGEIDSE----------GFLKIT 450
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL-MAAK 586
R K+ S G+ V P LE +S I Q++VIG+ ++ P A+I PD E + +K
Sbjct: 451 DRKKEMFKTSGGKYVAPQVLENVMKQSRFIEQMMVIGEGEKMPAALIQPDFEFIKEWGSK 510
Query: 587 RLSIVHADASELSKEKTI 604
+ + +D E+ K + +
Sbjct: 511 KGRNISSDPREIVKNQAV 528
>gi|289207858|ref|YP_003459924.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
gi|288943489|gb|ADC71188.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
Length = 602
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 159/559 (28%), Positives = 264/559 (47%), Gaps = 67/559 (11%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FRV DA A R + R ++ ++ + + L G+KP E+++L
Sbjct: 18 FRVRVEQTPDAPAYRHYNTARE-AWQQTSWREMGAMVDRWQAALAAEGLKPGERVALMLG 76
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
NS W+ DQ + G + V + + + +I +++ L + R++E +
Sbjct: 77 NSREWVAFDQAAMGLGLVPVPLYTDDRPDNVAYIIGQTQARILLLGESAHSRRLSEHFEN 136
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++R I+ + G+ + D V E+ + L R F + +
Sbjct: 137 MPSLRRIVNIGGEDTEPDDDRVTELEDW-------LTRHEATEF----------HHPDLD 179
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
+ +AT VYTSGTTG PKGV+L+H+N+L + P D+FLS LP H+ ER
Sbjct: 180 PEAMATIVYTSGTTGRPKGVILSHRNILENAWASSQAGPLSPADRFLSFLPLSHMLERTA 239
Query: 264 G-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 321
G Y G E+ + +++ L +DL +P +ISVP +YE ++ IQ + S R
Sbjct: 240 GLYMPMLIGAEVAFARSIQALGEDLVNVRPTVLISVPRIYERVHGRIQAGLKQKSGLGRA 299
Query: 322 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 381
+ +A + I + ++ G+ P +L LWP + E++
Sbjct: 300 LFKATVSIGWKRFEHQQGRGGWS-------PGFL---------------LWP---VLERI 334
Query: 382 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 440
V +K+ +G + V GG LP I F+ +G+ V GYG+TE+SPV+ P N+
Sbjct: 335 VARKVLDRLGGELRFAVCGGAPLPPPIAQFFIGLGLPVLHGYGMTEASPVVTVNTPDDNL 394
Query: 441 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 500
S+G P+ EI+I E +E+L R VM GY+KN AT++ +DEDGWL
Sbjct: 395 PASIGKPLPGVEIRI--GEMDELL---------TRSPCVMLGYWKNEEATRETIDEDGWL 443
Query: 501 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 560
++GD + R G V + GR KD +VL+ GE V P ++E A +L Q+
Sbjct: 444 HSGD---------QARIDDSGHVFIT-GRIKDILVLTNGEKVPPADMEMAIALDALFDQV 493
Query: 561 VVIGQDQRRPGAIIVPDKE 579
+++G ++ A++VP+ E
Sbjct: 494 MIVGDNRSFLTALVVPEPE 512
>gi|433592776|ref|YP_007282272.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|448335221|ref|ZP_21524371.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
gi|433307556|gb|AGB33368.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|445617602|gb|ELY71196.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
Length = 652
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 266/560 (47%), Gaps = 82/560 (14%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
FR +++ + + + G R +GV +++ +FS+ W +D +L+ GA +
Sbjct: 61 FRTLSYAEMRDIVRNLSAGFRELGVDAGDRIGIFSNTRMEWAQSDFALLSAGAAVTTVYT 120
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
SS +++ ++ + ++ + VEN + + + + + FI+ ++E
Sbjct: 121 SSSPDQVAYLLDDPDADGVVVENADLLENVL-AVEDELDLEFIV------------TIDE 167
Query: 168 IPVFS-YDEIIDLGRESRKAFSDSNDARKHYKYET----IGSDDIATYVYTSGTTGNPKG 222
+ + D+++ LG + DA Y+ I DD+A+ +YTSGTTG PKG
Sbjct: 168 VDGYDDRDDVLTLG----DVYDRGEDAFDLETYQVRIDGIDLDDLASLIYTSGTTGKPKG 223
Query: 223 VMLTHKNLLHQI---RSLYDIVPAENGDK--------FLSMLPPWHVYERACGYF-IFSR 270
V LTH N + R + P ++ D +S LP HV+ER G+F +F+
Sbjct: 224 VQLTHWNFRSNVNGSRKRFGPRPDKDDDVPVLDEESVAMSYLPLAHVFERTAGHFALFAG 283
Query: 271 GIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 329
G + Y + L++D QP SVP VYE +Y GI+++ SS +RR+ A +
Sbjct: 284 GTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKIYDGIREEASGSSVSRRIFEWA-TDV 342
Query: 330 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 389
AY + P IL LA+KLV+ ++ A
Sbjct: 343 GVAY-------------QQAASPG---------------PILKAKQALADKLVFSTVREA 374
Query: 390 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 448
+G + + +SGGGSL + Y A+G+ + GYGLTE+SP++A P +G++G +
Sbjct: 375 LGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPIVATNPPEGAKIGTIGPTL 434
Query: 449 NHTEIKIVD---AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLN 501
++ E+K+ + + AG G + V G V QGY+ P AT+ A D+DG W
Sbjct: 435 SNVEVKVDEAIADQDAFADDAGEVGELLVNGPNVTQGYWNKPGATEGAFTEDDDGTRWFR 494
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGDI + P G L R K IVLSTG+NV P LE+A S ++ Q +
Sbjct: 495 TGDIIHVRPD----------GYLEFRDRVKQIIVLSTGKNVAPGPLEDAFAASEVVEQAM 544
Query: 562 VIGQDQRRPGAIIVPDKEEV 581
V+G ++ GA++VP+ V
Sbjct: 545 VVGDGEKFIGALLVPNTNHV 564
>gi|339484361|ref|YP_004696147.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
gi|338806506|gb|AEJ02748.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
Length = 609
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 165/597 (27%), Positives = 285/597 (47%), Gaps = 69/597 (11%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ ++ + ++ Q + + L + P +++++ + N W++ +Q L G I +
Sbjct: 44 SEQWSCYTWERMNQLVARWQAALEQEALVPGDRVAIMTRNCPEWVMFEQAALGLGLIVIP 103
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
+ +E +I N + L +EN + ++ I++L +S
Sbjct: 104 LYTDDRAENAAYIINDANIKLLLLENSHQWQEFFAIRDQIEGLQRIVILRSYESGGFGSY 163
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
++ + ++D + A KH + D +AT +YTSGT+G PKGVM
Sbjct: 164 HDDRVLSTWDWL-----------PAHAGAVKHIGND---PDSLATIIYTSGTSGRPKGVM 209
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNL 282
L+H+N+L S ++P GD LS LP H +ER GY++ G + Y +++ L
Sbjct: 210 LSHRNILTNASSCLQVIPVFPGDLLLSFLPLSHTFERTAGYYVPMMAGATIAYARSIQQL 269
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++DL +P +ISVP +YE +Y+GI+ ++ S R + + Y+ F+ +G
Sbjct: 270 QEDLLTIRPTLLISVPRIYERVYAGIRAKLAEGSGFARWLFN--FAVDVGYSRFE-CQQG 326
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 401
R +P++ C LWP + EKLV K+ + +G + +SGG
Sbjct: 327 ----RGSWRPAH-------------C--LWP---VLEKLVASKVMNKLGGRLRFVMSGGA 364
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
+L + + +G+ + GYG+TESSPV+ A R NV SVG PI E+K+ E N
Sbjct: 365 ALSTEVSRIFIGLGLPILQGYGMTESSPVVCANRIKDNVPASVGLPIPGVEVKL--GEGN 422
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
+L +RG VM GY+ NP ATK + DGWLN+GDI I
Sbjct: 423 ALL---------IRGPNVMLGYWNNPEATKAIISSDGWLNSGDIASIDEQDH-------- 465
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKE 579
+ + GR K+ +VLSTGE V P ++E A LR L Q+++IG+ + ++V P +
Sbjct: 466 --VTITGRLKEIVVLSTGEKVPPADMEAAILRDPLFDQVMLIGEARSYLSVLVVLNPALQ 523
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS--FQIGPIHVVDEPFTV 634
+ M L + +E +++ +L ++ TS+ +I I V+ EP+++
Sbjct: 524 KDFMTQYGLD--GSLDNEQQRQQAEEILLNKVAHQTSEFPGYAKIRRIAVIPEPWSI 578
>gi|448303788|ref|ZP_21493734.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445592415|gb|ELY46602.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 648
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 159/552 (28%), Positives = 260/552 (47%), Gaps = 72/552 (13%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
FR ++ + + + G +GV+ +++ +F+D W D +L GA+
Sbjct: 60 EFRTLSYLEMRDIVRNLSAGFYDLGVEQGDRVGIFADTRMEWAQCDFALLGAGAVITTVY 119
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
SSS ++ ++ + ++ A+ VEN + E + + FI+ + D E
Sbjct: 120 RSSSSSQVEYLLDDPDASAVVVENEALLETVLE-VEDDLDLEFIVSM---DELSGYDDRE 175
Query: 167 EIPVFSYDEIIDLGRE--SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+I + +E+ D G E +A+ + D + DD+A+ +YTSGTTG PKGV
Sbjct: 176 DI--LTLNEVYDRGEEVFDLEAYQERVDGPEL--------DDLASLIYTSGTTGRPKGVQ 225
Query: 225 LTHKNLLHQIRSLY----------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGI 272
LTH N + ++ + P+ + + +S LP HV+ER G+F+ F+ G
Sbjct: 226 LTHWNFRSNVNAVRKRFAPRPDKPEGTPSLDEESLAVSYLPLAHVFERTAGHFVLFASGA 285
Query: 273 ELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ Y + L+ D QP SVP VYE +Y I++Q S A +R+ A +
Sbjct: 286 CVAYAESPDTLQADFSAVQPTTATSVPRVYEKIYDAIREQASESGAKKRIFEWA-TDVGV 344
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y G L +K LA+KLV+ ++ A+G
Sbjct: 345 EYQQADS--PGVVLNAKRK--------------------------LADKLVFSTVREALG 376
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
+ +SGGGSL + Y A+G+ + GYGLTE+SPV++ P +G++G+P+
Sbjct: 377 GEIELLISGGGSLSTDLCQLYHAMGLPIYEGYGLTETSPVVSTNPPEAVKIGTIGYPLPG 436
Query: 451 TEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 507
+++I + ++ A G V V+G V QGY+ P AT A EDGW TGDI
Sbjct: 437 VDVQIDERVADQAAFADDPGDVGELLVKGPNVTQGYWNKPGATTGAFTEDGWFRTGDI-- 494
Query: 508 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 567
+R G L RAK +VLSTG+NV P +E+A S +I Q +V+G +
Sbjct: 495 --------IHQRPDGFLEFRERAKQIMVLSTGKNVAPAPIEDAFAASEIIEQCMVVGDGE 546
Query: 568 RRPGAIIVPDKE 579
+ GA++VP+ +
Sbjct: 547 KFIGALLVPNSD 558
>gi|148263653|ref|YP_001230359.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
gi|146397153|gb|ABQ25786.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
Length = 603
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 274/574 (47%), Gaps = 71/574 (12%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
R+ +F ++ + L A GL+ VKP E++++ S+N W++AD G+L G +
Sbjct: 29 RKQGKFVTLSYAEFYERALMAARGLKKCNVKPGERVAILSENRAGWVIADMGILTVGGVT 88
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFN---RIAETLCSKAAMRFIILLWGKKSS 159
V ++ E++ ++ NHSE+ + V + ++ RI ET+ + G+
Sbjct: 89 VPIYPTNTPEQIEYVLNHSEARIVFVSSKFQYSKLLRIRETIPKVELVVSFERFLGEP-- 146
Query: 160 VAPDIVEEIPVFSYDEI--IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTT 217
E+PV ++ ++ IDL ++S + + IG D+ T +YTSGTT
Sbjct: 147 -------ELPVCTFYQLSEIDL------PVTESEKKQLEAGIDCIGPTDLLTLIYTSGTT 193
Query: 218 GNPKGVMLTHKNLLHQ-IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY 276
G PKGV LTH+N+L + V + LS LP HV ER GY++ +M
Sbjct: 194 GVPKGVPLTHRNILFDAFYTSRKAVVLRECEVHLSFLPLSHVLERTIGYYMMIMNGSMMA 253
Query: 277 TA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
A + + +++ +P M+SVP ++E +YS I + + S +R + I + Y
Sbjct: 254 FADSIEKVPENMMEVKPTVMVSVPRLFEKIYSRIFENVHQMSVVKRKLFHWAIEVGKKYV 313
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
+ I +K+ S L+A + +A++LV+ K++ G +
Sbjct: 314 EARYI---------EKRTSPLLAF---------------KYNVADRLVFGKLRERFGGNM 349
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
+ SGG L I+ F+ IG+ + GYGLTE+SP ++ GSVG + HTEI
Sbjct: 350 RLFCSGGAPLDKTINEFFWIIGLPILEGYGLTETSPAVSFNNFDQVRFGSVGTALEHTEI 409
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
K AE E+L +RG Q+M GY+K P+AT ++L +DGW TGDIG+I
Sbjct: 410 KT--AEDGELL---------IRGPQIMTGYYKEPAATGESL-QDGWFKTGDIGYIE---- 453
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G + + R K+ I+ + G+N+ P LE I V G + A+
Sbjct: 454 -------NGFVYITDRKKELIITAGGKNIAPQPLENELKLDKYISSAFVYGDRKPYLTAL 506
Query: 574 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 607
+VP+ E +L A+ I + D +L + ++ L
Sbjct: 507 LVPNMERLLEFAREKHIDYYDMDDLVIHEPVTRL 540
>gi|90580779|ref|ZP_01236582.1| putative long-chain-fatty-acid-CoAligase [Photobacterium angustum
S14]
gi|90438047|gb|EAS63235.1| putative long-chain-fatty-acid-CoAligase [Vibrio angustum S14]
Length = 607
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 256/549 (46%), Gaps = 59/549 (10%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
++I A L G++ ++K+ +F++N RW VAD L I V S+ ++ +I
Sbjct: 43 EQIQQLALALLCQGLQVQDKVGIFANNMPRWTVADFATLYNRCITVPIYPTSTEQQAAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
+ L V + E + I+ L S I E +Y+E +
Sbjct: 103 LQDASVKVLFVGEQAQMDAAVEIAAQCPQLERIVAL-----SDDVTIPEHPLACNYNEFV 157
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+++ + D R DD+ T +YTSGTTG PKGVML + N+ QI +
Sbjct: 158 ---KQASGEYQQELDTR----LSAQQMDDLVTLIYTSGTTGTPKGVMLDYANIASQIEAH 210
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMIS 296
+ + GD L LP HV+ERA ++ RG+ Y + N LK+ L +PHYM +
Sbjct: 211 DQRLALDEGDTSLCFLPLSHVFERAWTFYALHRGVVNCYLSDTNKLKEALITVKPHYMSA 270
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP V+E +YSGI ++ + R+++ + + A + + ++PS+L
Sbjct: 271 VPRVFEKIYSGIHDKVSRAPLHRKMIFTWAVNMGAKMAAAR---------QECREPSWL- 320
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 415
L + LAEK+V K+Q+ +G + K GG L I F+ AIG
Sbjct: 321 --------------LKKSYALAEKVVLSKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIG 366
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ V++GYG+TE++ ++ +C S+G P+ E+KI E NE+L VR
Sbjct: 367 INVKLGYGMTETTATVSCWDDSCYNPDSIGMPMPGAEVKI--GEQNEIL---------VR 415
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+ P T + EDG+L TGD G++ G L + R K+ +
Sbjct: 416 GPMVMRGYYNMPEETAKNFTEDGFLKTGDAGYLDEQ----------GNLFITDRIKELMK 465
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P +E A + I QI VI ++ A+IVP E + A+ L+I + D
Sbjct: 466 TSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFETLEEHARELNIKYKDR 525
Query: 596 SELSKEKTI 604
EL K I
Sbjct: 526 LELVKHSQI 534
>gi|448612502|ref|ZP_21662524.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
gi|445741350|gb|ELZ92852.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
Length = 667
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 255/543 (46%), Gaps = 74/543 (13%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
K+ + + A G R +GV+ +++ + S W D +L G + SS ++
Sbjct: 69 KMRDIVRNLAAGFRDLGVEAGDRVGILSHTRMEWAQTDFAVLGAGGAVTTVYTSSSERQV 128
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++ + + A+ VEN E R+ + + FI++ I E D
Sbjct: 129 RYLLSDPGANAVVVENQELLERVL-AVEDDLDLSFIVV-----------IDEYEGDEDRD 176
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+I+ LG R+ +++ ++ DD+A+ +YTSGTTG PKGV LTH N +
Sbjct: 177 DILTLGEVYRRGEECFDESEYESWLDSRDPDDLASLIYTSGTTGQPKGVQLTHWNFRSNV 236
Query: 235 RSLY---------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNL 282
Y VPA N D LS LP HV+ER G+F+ F+ G + Y + L
Sbjct: 237 NESYRRFGPRPDKGDVPAINPDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTL 296
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++D Q +P SVP VYE LY I+ Q S +R+ A + + AY
Sbjct: 297 REDFQLVRPTTGTSVPRVYEKLYDAIRTQASDSPVKKRIFEWA-VGVGQAY--------- 346
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 401
P YL++ H LA++LV+ +++ A+G + + +SGGG
Sbjct: 347 ----HTTDSPGYLLSA---------------KHRLADRLVFNQVREALGDNLEFFISGGG 387
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK----IVD 457
SL + Y A+G+ + GYGLTE+SPVI P +G++G+P+ + E+K +V
Sbjct: 388 SLSAELCALYHAMGLPIFEGYGLTETSPVITVNPPEAPKIGTIGYPLRNVEVKLDTTVVG 447
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHS 513
+T + G G + V G V GY+ P T+ A D+DG W TGD+ + P
Sbjct: 448 DQTGDA--GGDVGELLVHGPSVTAGYWNRPEETEAAFVEDDDGTRWFRTGDVVELRPD-- 503
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+
Sbjct: 504 --------GYVTFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSAL 555
Query: 574 IVP 576
IVP
Sbjct: 556 IVP 558
>gi|300771404|ref|ZP_07081280.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762074|gb|EFK58894.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 591
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/568 (28%), Positives = 275/568 (48%), Gaps = 77/568 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+R +++ + + + I + ++ + GVK ++++L S N W D GA
Sbjct: 27 KREGKWKTYSTDEFIEIIDNISKAMLARGVKKGDRIALMSGNRPEWNFVDFAANQIGAAI 86
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V SS++L +I +E ++ V N E ++ L K++++
Sbjct: 87 VPLYPTLSSQDLTYIIADAEVRSIFVSNAELTAKVKTAL--------------KENNL-- 130
Query: 163 DIVEEIPVFSYDEIIDLGR-ESRKAFSDSNDAR-KHYKYETIGSDDIATYVYTSGTTGNP 220
EI +F++++I DL + AF D K YK + + DD+ T +YTSGTTG P
Sbjct: 131 ----EINLFTFEKIDDLPTLDDVIAFGKEQDIDLKPYK-DAVSEDDLLTLIYTSGTTGKP 185
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-V 279
KGV+LTHKN++ + + ++ E +K LS LP H++ER Y FSRG+++ Y +
Sbjct: 186 KGVLLTHKNVMSNVNASNHLLKTEY-NKALSFLPLCHIFERMVVYLYFSRGVQIYYAENL 244
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
N+ D+ +P +VP V E +Y I ++ +AL I A
Sbjct: 245 DNIVADINEVKPMAFTTVPRVLEKVYDKIVEK-----------GKALTGIKKAL-----F 288
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 398
+ L ++P A ++ +A KL++ K + A+G K VS
Sbjct: 289 FWALELGHKYQEPEKNGAFYNFKLG------------IARKLIFSKWKEALGGEIKLIVS 336
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIV 456
GG +L + + A G++V GYGLTE+SPVIA +P G+VG +++ ++KI
Sbjct: 337 GGAALQERLARVFWAAGIQVLEGYGLTETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKI- 395
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
G G + V+G + GY+KN ATK+A+DE+G+ +TGDIG ++
Sbjct: 396 ----------GQDGEILVKGPSITAGYYKNQEATKEAIDEEGYFHTGDIGELSKD----- 440
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
G L + R K+ + G+ V P LE + S+LI Q++V+G++++ P A+IVP
Sbjct: 441 -----GFLKITDRKKEMFKTAGGKYVAPQVLENKFMESTLIGQVMVLGENRKFPSALIVP 495
Query: 577 DKEEVLMAAKRLSIVHADASELSKEKTI 604
EE+ K I + E+ K+ +
Sbjct: 496 AFEELEKWCKHKGIAYTSKDEIIKDPKV 523
>gi|429191225|ref|YP_007176903.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135443|gb|AFZ72454.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 660
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 265/556 (47%), Gaps = 77/556 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +GV+ ++ +F+ W D +L+ GA+ SS E++ ++ +
Sbjct: 81 LAAGFRELGVETGNRVGIFAQTRLEWAQTDFALLSAGAVVTTVYKGSSPEKVQYLLDDPG 140
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + VEN E R+ E + + F++ + + D V++ ++ +G E
Sbjct: 141 ADGVVVENEELLERVLE-VEDDLDLEFLVSMDELEGYDDRD-----DVYTLADVYGIGDE 194
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV- 241
AF +DA + + E DD+A+ +YTSGTTG PKGV LTH+N + +Y V
Sbjct: 195 ---AFE--SDAYQRWLDEP-DVDDLASIIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVG 248
Query: 242 PAENGD----------KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
P + D K +S LP HV+ER G+F+ F+ G + Y + LK+D
Sbjct: 249 PRPDKDEETASIDGDSKMVSYLPLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTV 308
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
QP SVP VYE +Y I++Q S+ R+ A TA R Y+
Sbjct: 309 QPTGATSVPRVYEKIYDAIREQATESAVKERIFNWA--------TAVGRKYQ------RA 354
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P IL +A+KLV+ +++ A+G + + VSGGG+L +
Sbjct: 355 DDPG---------------PILEAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLC 399
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--- 465
Y +G+ + GYGLTE++PV+ P +G+VG P+ E+ + D+ V+P
Sbjct: 400 TLYHGMGLPIYEGYGLTETAPVVTTNPPEEPKIGTVGPPVVDCEVTVDDS----VVPDGE 455
Query: 466 ----AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
G G + V+G V +GY++ P AT +A EDGW TGDI I P
Sbjct: 456 TANTEGETGELLVKGPNVAEGYWEKPEATDRAF-EDGWFRTGDIVTIRPDD--------- 505
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
+ R K +VLSTG+NV P +E+A L+ Q +V+G ++ GA+IVP+ + +
Sbjct: 506 -YIEFHERRKQLLVLSTGKNVAPAPIEDAFAARELVEQCLVVGDGEKFVGALIVPNVDAL 564
Query: 582 LMAAKRLSIVHADASE 597
A+ I D+++
Sbjct: 565 RRRAEDEGIDLPDSAQ 580
>gi|325982123|ref|YP_004294525.1| long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
gi|325531642|gb|ADZ26363.1| Long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
Length = 618
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 170/597 (28%), Positives = 283/597 (47%), Gaps = 73/597 (12%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
++R ++ Q+I + L + P +++++ N W++ +Q L G + +
Sbjct: 55 QWRSHTWEQMNQQIARWQAALTKESLVPGDRVAVMMRNCPEWVMFEQAALGLGLVVIPLY 114
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSK--AAMRFIILLWGKKSSVAPDI 164
E ++ N + L +EN + + + TL + R +IL + SV D
Sbjct: 115 VDDRVENATYVINDATVKLLLLENSQQWRQFL-TLPDEIEGLQRVVILRPFEPDSV--DA 171
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+ + V S E + + + +++ D+ +AT +YTSGT+G PKGVM
Sbjct: 172 CDNVRVVSAMEWLSVHASEVRHINNAPDS-------------LATIIYTSGTSGRPKGVM 218
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNL 282
L+H N+L S +VP D LS LP H +ER GY++ G + Y ++ L
Sbjct: 219 LSHHNILSNAFSCLQVVPVLPEDVLLSFLPLSHTFERTAGYYVPMMTGATIAYARSIPQL 278
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++DL +P MISVP +YE +Y+GIQ ++ R + + Y+ F+
Sbjct: 279 QEDLLIIRPTIMISVPRIYERVYAGIQAKLAEGPGFARWLFN--FAVDVGYSRFE----- 331
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 401
C Q+ Y R + ++WP L +K V K+ +G + +SGG
Sbjct: 332 -C----QQGRGY----------RRLSHVVWP---LLKKWVADKVMGKLGGRLRMVMSGGA 373
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
+L + + +G+ + GYG+TESSPV+ A R NV SVG PI E+K+ E+N
Sbjct: 374 ALSPQVSRVFIGLGLPILQGYGMTESSPVVCANRLEDNVPASVGLPIPGVEVKL--GESN 431
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
+L +RG VM GY+ NP AT+ + DGWLN+GDI I
Sbjct: 432 ALL---------IRGPNVMLGYWNNPEATQAVISSDGWLNSGDIASIDAQ---------- 472
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKE 579
G + + GR K+ IVLSTGE V P ++E A LR L Q+++IG+ + ++V P +
Sbjct: 473 GHVTITGRLKEIIVLSTGEKVPPADMEAAILRDPLFEQVMLIGESRSYLSVLVVLNPARR 532
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS--FQIGPIHVVDEPFTV 634
+ MA L +E +++ +L ++ + TS+ +I + V EP++V
Sbjct: 533 QDFMAHYGLG--DDLTNEQQRQQAEEILLEKITRQTSEFPGYAKIRRVAVAQEPWSV 587
>gi|338534144|ref|YP_004667478.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337260240|gb|AEI66400.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 614
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/546 (28%), Positives = 258/546 (47%), Gaps = 75/546 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+++ R+ ++ E+ + GL GVKP +++++F++ S +WL+ D + A AI
Sbjct: 32 KKDGRWHDVTFARFLDEVKALSAGLVAQGVKPGDRVAIFANTSLQWLICDVAISAAQAIT 91
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVEN-------PEFFNRIAETLCSKAAMRFIILLWG 155
V + ++ EE +I NHSE+ + V+N P R+ + L ++R ++ G
Sbjct: 92 VPIYASNTPEECRYILNHSETTLVFVDNDEQDARQPGRLTRLRQKLPQCPSVRRVVAFEG 151
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
+ A S +++ GR A D +AR + +D A +YTSG
Sbjct: 152 PVAGGAE--------LSLADVVTQGRAEHAARPDDFEAR----VNGVSMEDTAAIIYTSG 199
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG+PKGV+LTH+N ++ ++ + GD + LP HV+ + S G L+
Sbjct: 200 TTGDPKGVILTHQNWAYEAKAAQSVGMMVPGDSVMLFLPLAHVFAQVVKAAWLSMGYRLV 259
Query: 276 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+V L +L +P + SVP V+E +Y+ + T+ +A + L R +F
Sbjct: 260 VAESVDKLLANLAETRPTALPSVPRVFEKVYN----NVVTNGSATPGLKGRLFRWAF--- 312
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
++++ + R Q + + LA+KLV+ K+ + I
Sbjct: 313 ---KLFDEYVEARQQGREYSSLGFT-----------------LAKKLVFSKVHATISEKL 352
Query: 395 AG-----VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G +SGG L I F++ +G+KV GYGLTE+S R +GSVG P+
Sbjct: 353 GGNMRVFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETSAGTTINREHRIKIGSVGAPLP 412
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
TE+KI S G + +RG VM+GY+KNP AT A+D +GW +TGDIG +
Sbjct: 413 GTEVKIA-----------SDGEILIRGPGVMKGYYKNPEATADAIDAEGWFHTGDIGALD 461
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
+ L + R KD IV + G+NV P LE A +I Q +V G +R
Sbjct: 462 ADN----------YLRITDRKKDLIVTAGGKNVAPQNLENALKTFPIISQAMVYG--DKR 509
Query: 570 PGAIIV 575
P +++
Sbjct: 510 PYLVVL 515
>gi|354610157|ref|ZP_09028113.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
gi|353194977|gb|EHB60479.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
Length = 644
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 272/567 (47%), Gaps = 79/567 (13%)
Query: 60 ILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
+ + A G R +G++P +++ +F+ W D G+LA G SSS ++ H+
Sbjct: 73 VRNLAAGFRELGIEPGDRVGIFAHTRMEWAQCDFGVLAAGGAVTTVYPGSSSRQVEHLLG 132
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL 179
S + + VE R E + ++F++ + D V + S ++ +
Sbjct: 133 DSGATGVVVEGESELERFRE-VEDDLEVKFVVTM---------DHVADADTLSLADLYER 182
Query: 180 GRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQI 234
GRE+ R A+ D R + D+A+ +YTSGTTG PKGV LTH+N L+Q
Sbjct: 183 GREAYDRDAYESWIDERDY--------GDLASLIYTSGTTGKPKGVTLTHENFRANLNQS 234
Query: 235 RSLYDIVPA-------ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDD 285
R + P + + +S LP HV ER G+F+ F+ G + Y + L++D
Sbjct: 235 RKRFGPRPDKQDGQSIDETSRVVSYLPLAHVLERLAGHFLMFASGAHVCYAESPDTLQED 294
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
QP SVP VYE L+ +++Q S R+ +A + YE
Sbjct: 295 FGLVQPTSGTSVPRVYEKLFDAVREQATESPTKERI-------FEWAVDVGREYYE---- 343
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
A +L +A++LV++K++ A+G + + +SGGGSL
Sbjct: 344 ------------------ADDPGLVLRGKRAVADRLVFEKVRDALGGNVEFFISGGGSLS 385
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETN 461
+ Y IG+ + GYGLTE+SPV++ +G++G P+ T++++ V +
Sbjct: 386 PELCALYHGIGLPILEGYGLTETSPVVSVNPAEEPKVGTIGPPVPGTDLELDESVASPEQ 445
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSR 518
+ AG G + VRG QV GY++ P AT++A E DG W TGD+ I R
Sbjct: 446 QERTAGRAGELLVRGPQVFDGYWELPEATEEAFVERDGQEWFRTGDVVEI---------R 496
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
G V LE RAK + LSTG+NV P +E+A S L+ Q +V+G +Q+ AI+VP+
Sbjct: 497 EDGYVRFLE-RAKQLLTLSTGKNVAPGPIEDAFAASPLVEQAMVVGDEQKFVSAIVVPNF 555
Query: 579 EEVLMAAKRLSI-VHADASELSKEKTI 604
+ V A + V AD +EL ++ +
Sbjct: 556 DGVRRWAHNEDVDVPADDAELCRDDRV 582
>gi|317051585|ref|YP_004112701.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
gi|316946669|gb|ADU66145.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
Length = 611
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 173/580 (29%), Positives = 271/580 (46%), Gaps = 76/580 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+R + ++ IL + GLR G+KP +++++FS+N W +AD G+ A AI
Sbjct: 29 KRRGEWVTLSYAQFYDRILMASRGLRKAGIKPGDRVAIFSENRTGWAIADFGVQAARAIT 88
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V + +++E+ ++ NHSES + V + +I + + + ++ S
Sbjct: 89 VPIYATNTAEQAEYVINHSESRIVFVSTRLQYEKILQIRQNIPHVERVVSFEQFLGS--- 145
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
+++PV + ++ E +D + I +D+ T +YTSGTTG PKG
Sbjct: 146 ---DDLPVNTLQQL----SEVSHPLTDEERVELEEEIAQITPEDLITVIYTSGTTGVPKG 198
Query: 223 VMLTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
VMLTH N+L ++ L + E FLS LP HV ER GY LMY A
Sbjct: 199 VMLTHSNMLFDACAGVQKLGGMAEDE---VFLSFLPLSHVLERTAGYH-----APLMYGA 250
Query: 279 -------VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
V + +++Q +P M+SVP ++E +YS I + + + A RR + + +
Sbjct: 251 HVAFAENVDKVVENIQEIRPTVMVSVPRLFEKIYSRIYENVHQAPAVRRSLFHWAVDVGK 310
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI- 390
Y ++R E QP L + LA++LV+ KI+
Sbjct: 311 QYV-YRRYIE--------NQP---------------VGSLGVKYGLAKRLVFSKIKPRFG 346
Query: 391 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
G + +SGG L I+ F A+G+ V GYGLTE+SP + N GSVG ++
Sbjct: 347 GRMRFFISGGAPLDKTINEFMWAVGIPVFEGYGLTETSPALTLNTIADNRFGSVGQVLDQ 406
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
TE+K AE E+L VRG QVMQGY+KNP AT Q + DGWL TGDI I
Sbjct: 407 TEVKT--AEDGELL---------VRGPQVMQGYYKNPEATAQTII-DGWLYTGDIARIDE 454
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ G + + R K+ IV + G+NV P +E I Q V G +
Sbjct: 455 N----------GFVYIVDRKKEIIVTAGGKNVAPQPIENELKLDKYISQAFVYGDRKPYL 504
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 610
A++ P+ E +L A+ + + + +L K + L+ E
Sbjct: 505 VALLTPNVERLLEFAQDKKLNYIEIRDLVTHKKVHKLFEE 544
>gi|30249519|ref|NP_841589.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
gi|30138882|emb|CAD85460.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
Length = 612
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 254/548 (46%), Gaps = 92/548 (16%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R + + + + L + P +++++ + N +W++ +Q L G + V +
Sbjct: 51 WRDYTWDDMANAVKRWQMALSQENLSPGDRVAVMARNCPQWVMFEQAALGLGLVVVPLYT 110
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL---------WGKKS 158
+E +++ + L +EN + + E + ++ I++L G K
Sbjct: 111 EDRAENAAWCLDNAGTALLLLENMTRWEAMNEAMTGLQQLKRIVILDASPEDVRQTGDKR 170
Query: 159 SVA-----PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 213
++A P+ +IP D + +AT +YT
Sbjct: 171 AIALQDWLPETPGDIPSVQNDPHV-----------------------------LATIIYT 201
Query: 214 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGI 272
SGTTG PKGVML+H N+L S +V D LS LP H +ER GY++ G
Sbjct: 202 SGTTGRPKGVMLSHNNILSNAYSSAQVVTVRPDDVLLSFLPLSHTFERTAGYYVPMLCGA 261
Query: 273 ELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ Y ++R L+DDL +P +ISVP +YE +Y+GIQ ++ A R++ + + +
Sbjct: 262 TVAYARSIRQLQDDLLIIRPTILISVPRIYERIYAGIQAKLAEGPAISRLLFK--LAVDI 319
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y+ F+ R QK+ + W I +LWP L +KLV +K+ +G
Sbjct: 320 GYSRFE---------RQQKR-------VGWR----ISHLLWP---LLDKLVARKVMEKLG 356
Query: 392 ISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
V SGG +L I + +G+ + GYGLTE+SPV+ A R N+ SVG P
Sbjct: 357 GRLWQVMSGGAALSPEISRVFIGLGLPILQGYGLTETSPVVCANRLDDNLPSSVGRPAPG 416
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
E+++ G + + +RG VM GY+ NP AT L DGWLN+GD I
Sbjct: 417 VEVRL-----------GEQNALLIRGPNVMLGYWNNPEATHAILSADGWLNSGDTASI-- 463
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+SR + + GR KD IV STGE + P ++E A LR + Q++++G+ +
Sbjct: 464 ---DAQSR-----VTITGRLKDIIVTSTGEKIPPADMEAAILRDPIFEQVMIVGEGRSYL 515
Query: 571 GAIIVPDK 578
A+ V K
Sbjct: 516 SALTVLSK 523
>gi|302868999|ref|YP_003837636.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
gi|302571858|gb|ADL48060.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
Length = 600
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 253/539 (46%), Gaps = 74/539 (13%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ R V C + E++ A+GL GV P +++ L S W + D + A GA+ V
Sbjct: 43 DAREDVTCR-QFRDEVVAVAQGLIAAGVSPGDRVGLMSRTRYEWTLFDYAIWAAGAVTVP 101
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
SS+E+ I S +VA+ VE+ +A +R + W
Sbjct: 102 IYETSSAEQAAWILGDSGAVAVVVESTAHATMVAGVRDRLPELREV---W---------- 148
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+I + + D+++ G + + A + + +DD+AT +YTSGTTG PKG +
Sbjct: 149 --QIDLGAVDDLVAAG-------ASVDRAEVETRRSLLKADDVATIIYTSGTTGRPKGCV 199
Query: 225 LTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
LTH+N+ I + ++P G L LP H + R + + + A +N
Sbjct: 200 LTHRNIYSDIANAVPVLPNLFRQGASTLLFLPLAHAFARLIQVGVVHARATMAHCADTKN 259
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
L +LQ ++P +++SVP V+E +Y+G +Q S ++ RA +++ A++ + +
Sbjct: 260 LVAELQDFKPTFVLSVPRVFEKVYNG-ARQKAESEGKGKIFDRAE-KVAIAWSEAQELPG 317
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGG 400
G L L H L +KLVY+K+++A+G + + +SGG
Sbjct: 318 GPGLG------------------------LRAQHALFDKLVYRKLRAAMGGLCRDAISGG 353
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L + F+ +GV + GYGLTE+SP AA PT +G+VG P+ I+I D
Sbjct: 354 APLGARLGHFFRGVGVTICEGYGLTETSPAAAANLPTGTRIGTVGRPLPGVTIRIDD--- 410
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
G V + G V QGY+ N +AT +A+ DGW TGD+G +
Sbjct: 411 --------DGEVLIAGDIVFQGYWHNDAATAEAISTDGWFRTGDLGHLDDD--------- 453
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G L + GR K+ IV + G+NV P LE+ LI Q VV+G Q A++ D+E
Sbjct: 454 -GYLSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVVGDRQPFIAALVTIDEE 511
>gi|381165792|ref|ZP_09875019.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
gi|380685282|emb|CCG39831.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
Length = 612
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 285/617 (46%), Gaps = 96/617 (15%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
++RR+ +R + E+L + GL +GV ++++L +N W +AD ++ATGA
Sbjct: 28 VARRDGEWRTQSWRAVADEVLALSAGLERLGVTAGDRVALIGENRPEWAIADLAIMATGA 87
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
I V + ++ + HI ++S + V P +R+ +A +I++ +
Sbjct: 88 ITVPAYTTNTVADHRHILDNSGAKLAIVSTPALAHRVLAAAAEASARPGVIVIDPPFAEP 147
Query: 161 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG--SDDIATYVYTSGTTG 218
IV S+DE++ LGR S A H + G D A ++TSGT G
Sbjct: 148 PEGIVRH----SWDEVMALGRAS--------GAEAHVRARVAGLRRDHTACIIHTSGTGG 195
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENG-----DKFLSMLPPWHVYERACGYFI-FSRGI 272
PKGVML+H +LH +V NG + FLS LP H YE G F+ S G
Sbjct: 196 VPKGVMLSHGAILHNCYGAAVLVDDLNGGVHCDEVFLSFLPLSHAYEHTAGLFLPISIGA 255
Query: 273 ELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ Y ++ +L ++ +P M +VP +Y+++ I K + R+ + A + +
Sbjct: 256 TIYYADSIEHLSANMLEVRPTIMTAVPRLYDSIRIRILKGLGKVGRLRQTLFHAALSL-- 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
+RI +G L +D L R++ +++V KI+ G
Sbjct: 314 ---GERRIAQGGRL-----------GPLDSLADRVL-----------DRVVRDKIRDRFG 348
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
KA VSGG LP + F+ ++GV + GYG TE++PVI+ RP + SVG I
Sbjct: 349 GRLKAFVSGGAPLPPEVGRFFLSLGVTILQGYGQTEAAPVISVNRPGRVRVESVGPVIEG 408
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
EI+I A E+L VRG VMQGY+++P++T A+D DGWL+TGDIG I P
Sbjct: 409 VEIRI--AADGEIL---------VRGEMVMQGYWQDPASTAAAIDPDGWLHTGDIGVIDP 457
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
G L + R KD IV S G+NV P +E I Q +V G RRP
Sbjct: 458 D----------GNLRITDRKKDIIVNSGGDNVSPQRIECLLTLQPGIAQAMVHG--DRRP 505
Query: 571 G--AIIVPDKEEVLM----AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP 624
A+IVPD + V A +R+ I H L E+ + + + P
Sbjct: 506 HLVALIVPDPDRVQALGAPARERVVIEH------------PRLKAEIAHAVEQVNAHLAP 553
Query: 625 IH------VVDEPFTVN 635
+ V+ EPF+V
Sbjct: 554 VERIRRFTVLAEPFSVE 570
>gi|448323702|ref|ZP_21513155.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620838|gb|ELY74325.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 655
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 165/556 (29%), Positives = 265/556 (47%), Gaps = 77/556 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +GV+ ++ +F+ W D +L+ GA+ SS E++ ++ +
Sbjct: 76 LAAGFRELGVETGNRVGIFAQTRLEWAQTDFALLSAGAVVTTVYKGSSPEKVQYLLDDPG 135
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + VEN E R+ E + + F++ + + D V++ ++ +G E
Sbjct: 136 ADGVVVENEELLERVLE-VEDDLDLEFLVSMDELEGYDDRD-----DVYTLADVYGIGDE 189
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV- 241
AF +DA + + E DD+A+ +YTSGTTG PKGV LTH+N + +Y V
Sbjct: 190 ---AFE--SDAYQRWLDEP-DVDDLASIIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVG 243
Query: 242 PAENGD----------KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
P + D K +S LP HV+ER G+F+ F+ G + Y + LK+D
Sbjct: 244 PRPDKDEETASIDGDSKMVSYLPLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
QP SVP VYE +Y I++Q S+ R+ A TA R Y+
Sbjct: 304 QPTGATSVPRVYEKIYDAIREQATESAVKERIFNWA--------TAVGRKYQ------RA 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P IL +A+KLV+ +++ A+G + + VSGGG+L +
Sbjct: 350 DDPG---------------PILEAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--- 465
Y +G+ + GYGLTE++PV+ P +G+VG P+ E+ + D+ V+P
Sbjct: 395 TLYHGMGLPIYEGYGLTETAPVVTTNPPEEPKIGTVGPPVVDCEVTVDDS----VVPDGE 450
Query: 466 ----AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
G G + V+G V +GY++ P AT +A EDGW TGDI I P
Sbjct: 451 TANTEGETGELLVKGPNVAEGYWEKPEATDRAF-EDGWFRTGDIVTIRPDD--------- 500
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
+ R K +VLSTG+NV P +E+A L+ Q +V+G ++ GA+IVP+ + +
Sbjct: 501 -YIEFHERRKQLLVLSTGKNVAPAPIEDAFAARELVEQCLVVGDGEKFVGALIVPNVDAL 559
Query: 582 LMAAKRLSIVHADASE 597
A+ I D+++
Sbjct: 560 RRRAEDEGIDLPDSAQ 575
>gi|409721734|ref|ZP_11269892.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|448722240|ref|ZP_21704778.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|445789951|gb|EMA40624.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
Length = 643
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 255/535 (47%), Gaps = 72/535 (13%)
Query: 60 ILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
+ + A G R +GV+ +++ LFS+ W AD G+LA G + + SS ++ ++ +
Sbjct: 73 VRNLATGFRELGVEAGDRVGLFSNTRMEWAQADFGLLAAGGVVTTVYTSSSPRQVEYLLS 132
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL 179
+ + VEN E +R+ E + + FI+ + + D V + E+ D
Sbjct: 133 DPGATGVVVENGELLDRVLEVEAA-LDLEFIVSIDDFEGYDDRD-----DVLTLAEVHDR 186
Query: 180 GRESRKAFSDSNDARKHYKYETIGSDD--IATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
G + A + Y+ +G D +A+ VYTSGTTG PKGV L+H+N + +
Sbjct: 187 GAAAFDA--------EAYESWFVGRDPEALASLVYTSGTTGRPKGVKLSHRNFRANVDQV 238
Query: 238 Y----------DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDD 285
Y D G LS LP HV+ER G+F+ F+ G + Y + L++D
Sbjct: 239 YRRFGPRPDKGDTPTIGPGSTSLSFLPLAHVFERLAGHFMQFAAGSTVAYAESPDTLRED 298
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
P SVP VYE LY I++Q S+ + R+ A T R Y G
Sbjct: 299 FSLVTPSSATSVPRVYEKLYDTIREQASGSAVSSRIFGWA--------TEVGRAYHG--- 347
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
+ P A L H LA++LV+ +++ +G + +SGGGSL
Sbjct: 348 ---SESPG---------------AGLRAKHALADRLVFSQVREGVGGNIDFFISGGGSLS 389
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET--NE 462
+ + A+G+ + GYGLTE++PV+A P +G++G+P++ E++ VD+ N+
Sbjct: 390 PDLARLFHAMGLPILEGYGLTETAPVVAVNPPEAPEIGTIGYPVHDEEVR-VDSTVVPND 448
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
G G + V+G V +GY+ P T A D W TGD+ +R G
Sbjct: 449 FDAEGEVGELLVKGPNVTEGYWNRPEETDDAFD-GKWFRTGDV----------VEQRPDG 497
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
L R+K +VLSTG+NV P +E+A + L+ Q +V+G ++ AI+VP+
Sbjct: 498 YLAFRERSKQLLVLSTGKNVAPRPIEDAFASNPLVEQCMVVGDGEKFVSAIVVPN 552
>gi|289581849|ref|YP_003480315.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531402|gb|ADD05753.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 669
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 174/627 (27%), Positives = 284/627 (45%), Gaps = 98/627 (15%)
Query: 20 HRHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLS 79
R+ V+ R+ D V S F +++ + + A G R +G++ +++
Sbjct: 37 QRYKGGVYDRSLTDDVLP----SAAPGSFNALSYAEMRDIVRNLAAGFRDLGIESGDRVG 92
Query: 80 LFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAE 139
+FS+ W D +L+ GA+ + SS +++ ++ + ++ + VEN E R+ E
Sbjct: 93 IFSNTRMEWAQTDFALLSAGAVVTTVYTSSSPDQVSYLLDDPDADGVVVENQELLERVLE 152
Query: 140 TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR-ESRKAFSDSNDARKHYK 198
+ + + FI+ + D+I+ L R A + +A + +
Sbjct: 153 -VEDELDLEFIVSIDNFDG-----------YDDRDDILTLAELHDRGAGAFDEEAYQTWV 200
Query: 199 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD-------- 247
E DD+A+ +YTSGTTG PKGV LTH N ++QIR + P + D
Sbjct: 201 DEP-AMDDLASLIYTSGTTGKPKGVQLTHGNFRSNVNQIRKRFAPRPDRDDDVPVIDSES 259
Query: 248 KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 305
+ +S LP HV+ER G+F+ F+ G + Y + L++D QP+ SVP VYE +Y
Sbjct: 260 QAMSYLPLAHVFERTAGHFLLFASGACVAYAENPDTLQEDFSTVQPNTATSVPRVYEKIY 319
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
I++Q SS +R+ A +++ A
Sbjct: 320 DAIREQASESSVKKRIFEWATD-----------------------------VGVEYQRAD 350
Query: 366 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
IL LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGL
Sbjct: 351 SPGPILNAKRALADKLVFSTVREALGGEIEILISGGGSLSPELCRLYHAMGLPIFEGYGL 410
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE--VLPAGSKGIVKVRGSQVMQG 482
TE+SPVIA P +G++G P+ +I I ++ N+ G+ G + VRG V QG
Sbjct: 411 TETSPVIAVNPPEEPKIGTIGPPVVDVDISIDESVVNQDAFDDPGAVGELLVRGPNVTQG 470
Query: 483 YFKNPSATKQALDE----DG--------------------WLNTGDIGWIAPHHSRGRSR 518
Y+ PSAT +A E DG W TGD+ +
Sbjct: 471 YWNKPSATDRAFTEGVQPDGGAALEAPREDGDADADDDGLWFRTGDVVHL---------- 520
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
R G + R K IVLSTG+NV P +E+A S ++ Q +V+G ++ GA++VP+
Sbjct: 521 RDDGYISFRDRVKQLIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGDGEKFIGALLVPNT 580
Query: 579 EEVLMAAKRLSI-VHADASELSKEKTI 604
E + A I + DA L + +
Sbjct: 581 EHIREWADEEGIDLPGDAEALCDDDRV 607
>gi|384098415|ref|ZP_09999531.1| putative long chain fatty-acid CoA ligase [Imtechella halotolerans
K1]
gi|383835672|gb|EID75095.1| putative long chain fatty-acid CoA ligase [Imtechella halotolerans
K1]
Length = 592
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 256/536 (47%), Gaps = 80/536 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFSD-NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ GL +GVKP +K+++ S N W + D G+L GA NV S EE +I NHSE
Sbjct: 48 SRGLLRLGVKPNDKIAVISSSNRTEWNILDIGILQIGAQNVPIYPTISKEEYEYILNHSE 107
Query: 123 SVALAVENPEFF---NRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL 179
S V + E N I KA F DI E S+ EI+ L
Sbjct: 108 STYCFVSDSEILEKLNAIKVNTHLKAVYTF------------NDIPGEQ---SWKEILTL 152
Query: 180 GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 239
G ++ + +ARK+ + +D+AT +YTSGTTG PKGVML+HKN++ +
Sbjct: 153 GADASN--QEEVEARKN----NVSPEDLATLIYTSGTTGTPKGVMLSHKNIVSNVLDSEK 206
Query: 240 IVPAENG-DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISV 297
VP ENG K LS LP HV+ER Y G+E+ + ++ + D+L+ +PH M +V
Sbjct: 207 RVPFENGKSKGLSFLPVCHVFERMILYLYQYCGVEIYFAESIETMSDNLKEIKPHVMTAV 266
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P +YE +Y I + ++ + I + Y +
Sbjct: 267 PRLYEKVYDKIVAKGSELGGIKKALFFWAINLGLRYEPY--------------------G 306
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 416
W + W L +A KL++ K Q +G + + VSG +L + + A G+
Sbjct: 307 ANGWWYE-------WQLK-IARKLIFSKWQEGLGGNLELMVSGSAALQPRLTRMFAAAGM 358
Query: 417 KVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
+ GYGLTE+SPVIA +R +G+VG I++ E+KI AE E+L V
Sbjct: 359 PIMEGYGLTETSPVIAVNDQRNHGFKIGTVGKIIDNVEVKI--AEDGEIL---------V 407
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G +M GY+K+P T + + D + +TGDIG I G L + R K+
Sbjct: 408 KGPNIMMGYYKDPQKTAEVMTGD-YFHTGDIGEIDSE----------GFLKITDRKKEIF 456
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
S G+ + P +E +S I QI+V+G+ ++ P A+I P+ E + AKR +I
Sbjct: 457 KTSGGKYIVPQYIENEMKQSRFIEQIMVVGEGEKMPAALIQPNFEFLKEWAKRHNI 512
>gi|163756365|ref|ZP_02163479.1| hypothetical protein KAOT1_01914 [Kordia algicida OT-1]
gi|161323717|gb|EDP95052.1| hypothetical protein KAOT1_01914 [Kordia algicida OT-1]
Length = 591
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 250/535 (46%), Gaps = 84/535 (15%)
Query: 58 QEILDFAE----GLRVIGVKPEEKLSLFSD-NSCRWLVADQGMLATGAINVVRGSRSSSE 112
QE +D A GL +GV+P +K+++ S N W + D G+L TGA NV + E
Sbjct: 38 QEYIDQANAISRGLLRLGVQPNDKIAVISTTNRTEWNIMDIGILQTGAQNVPIYPTIAKE 97
Query: 113 ELLHIYNHSESVALAVENPEF---FNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
+ +I NHSES+ V + E N+I K F +I E
Sbjct: 98 DYEYILNHSESIYCFVSDIEIIEKLNQIKGNTKLKGVYTF------------DEITGEA- 144
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
++ E++ LG ++ SND + + + D+AT +YTSGTTG PKGVML H N
Sbjct: 145 --NWTEVLKLGEDT------SNDDELQARKDAVTPQDLATLIYTSGTTGKPKGVMLAHSN 196
Query: 230 LLHQIRSLYDIVPAENGD-KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQ 287
L+ + VP NG K LS LP HV+ER Y GIE+++ ++ + D+L+
Sbjct: 197 LVSNVLDSQKRVPLHNGKAKALSFLPVCHVFERMILYLYQYCGIEIVFAESIEKISDNLK 256
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+PH M +VP +YE +Y I + + ++ + I + Y + +
Sbjct: 257 EVKPHVMTAVPRLYEKVYDKIYAKGADLTGIKKKLFFWAIELGLKYEPYGQ--------- 307
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
+ W I A KL++ K Q +G + + VSG L
Sbjct: 308 ------------NGWWYEFQLKI-------ARKLIFSKWQEGLGGNLELMVSGSAPLQAR 348
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+ + A G+ + GYGLTE+SPV++ +R +G+VG I++ E+KI D
Sbjct: 349 LTRVFAAAGIPIMEGYGLTETSPVVSVNDQRGGGFRIGTVGRIIDNVEVKIAD------- 401
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G + V+G VMQGY+K+P T + +G+ +TGDIG + G L
Sbjct: 402 ----DGEILVKGPNVMQGYYKDPEKTASVMS-NGYFHTGDIGEVCEE----------GFL 446
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+ R KD S G+ V P LE +S I QI+VIG+ ++ P A+I P+ E
Sbjct: 447 KITDRKKDMFKTSGGKYVIPALLENRFKQSRFIEQIMVIGEGEKMPAALIQPNFE 501
>gi|448727043|ref|ZP_21709420.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
gi|445792243|gb|EMA42854.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
Length = 643
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 160/570 (28%), Positives = 270/570 (47%), Gaps = 79/570 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ LF++ W D +LA G + + SS +++ ++ +
Sbjct: 76 LAAGFRSLGIEAGDRVGLFANTRMEWAQTDFAVLAAGGVVTTVYTSSSPDQVEYLLDDPG 135
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAP-DIVEEIPVFSYDEI 176
+ + VEN E R+ + + + FI+ + +G + V V E V S+D+
Sbjct: 136 ATGVVVENQELLERVL-AVEDELDLDFIVSMDSIEGYGDREDVLTLAQVHERGVGSFDQ- 193
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
+ + D+ D DD+A+ VYTSGTTG PKGV LTH+N +
Sbjct: 194 -----SDYEGWLDARD-----------PDDLASLVYTSGTTGQPKGVRLTHRNFKANVDQ 237
Query: 237 LY----------DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKD 284
+Y D+ + LS LP HV+ER G+F+ F+ G + Y + L++
Sbjct: 238 VYRRFGPREDKGDLPTIDPSASTLSFLPLAHVFERLAGHFLMFAAGATVAYAESPDTLQE 297
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
D P SVP VYE LY I++Q S R+ A + + Y +R G
Sbjct: 298 DFPLVTPSTGTSVPRVYEKLYDSIREQAGESPLRERIFEWA-VDVGREYQ--QRESPGLS 354
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
L + LA++LV+++++ +G + + +SGGGSL
Sbjct: 355 LRAKRA--------------------------LADRLVFEQVREGVGGNIEFFISGGGSL 388
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ ++ +G+ + GYGLTE++PV+A P +G++G P+ EIK+ + +
Sbjct: 389 SPELGRLFDGMGLPILEGYGLTETAPVVAVNPPEAPEIGTIGPPVVDEEIKVDASVVPDD 448
Query: 464 LPA-GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
L A G G + VRG V GY++NP AT+ + D + W TGD+ RR G
Sbjct: 449 LDADGEVGELLVRGPNVTDGYWENPEATEDSFDGE-WFRTGDV----------VERRPDG 497
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
+ R+K +VLSTG+NV P +E+A + L+ Q +V+G ++ ++VP++E V
Sbjct: 498 YIAFRERSKQLLVLSTGKNVAPGPIEDAFAQRQLVEQCMVLGDGEKFVSGLVVPNEERVR 557
Query: 583 MAAKRLSI-VHADASELSKEKTISLLYGEL 611
A I + D+S L + + + GE+
Sbjct: 558 KWAGEEGIDLPEDSSALCQNEHVQARIGEV 587
>gi|330448784|ref|ZP_08312431.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492975|dbj|GAA06928.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 607
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 260/554 (46%), Gaps = 69/554 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
++I A L G++ ++K+ +FS+N RW VAD L I V S+ ++ +I
Sbjct: 43 EQIQQLALALLRQGLQVQDKVGIFSNNMPRWTVADFATLYNRCITVPIYPTSTPQQAAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP----VFSY 173
+ L V + E + I+ L + D+V IP Y
Sbjct: 103 LQDASVKVLFVGEQAQMDAAVEIAEQCPQLERIVAL-------SDDVV--IPKHPLACHY 153
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++ ++ ++ + DAR + DD+ T +YTSGTTG PKGVML + N+ Q
Sbjct: 154 NDFVN---QASAEYQQELDARLAEQ----AMDDLITLIYTSGTTGTPKGVMLDYANIASQ 206
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPH 292
I + + + G L LP HV+ERA +++ RG+ Y + N LK+ L +PH
Sbjct: 207 IEAHDQRLALDEGGTSLCFLPLSHVFERAWTFYVLHRGVVNCYLSDTNKLKEALVTVKPH 266
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ-KQ 351
YM +VP V+E +YSGI + V+RA + +T + + R + ++
Sbjct: 267 YMSAVPRVFEKIYSGIHDK----------VSRAQLHRKMIFTWAVNMGAKMSVARQECRE 316
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
PS+L L H LAEK+V K+Q+ +G + K GG L I F
Sbjct: 317 PSWL---------------LKKSHALAEKVVLSKLQAVLGGNIKFMPCGGAKLDAGIGRF 361
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ AIG+ V++GYG+TE++ ++ +C S+G P+ E+KI + NE+L
Sbjct: 362 FHAIGINVKLGYGMTETTATVSCWDDSCYNPDSIGMPMPGAEVKI--GQENEIL------ 413
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
VRG VM+GY+ P T + EDG+L TGD G+I G L + R
Sbjct: 414 ---VRGPMVMRGYYNMPEETAKNFTEDGFLKTGDAGYIDEQ----------GNLFITDRI 460
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
K+ + S G+ + P +E A + I QI VI ++ A+IVP E + A+ L+I
Sbjct: 461 KELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFETLEEHARELNI 520
Query: 591 VHADASELSKEKTI 604
+ D EL K I
Sbjct: 521 KYKDRLELIKHSQI 534
>gi|429753318|ref|ZP_19286127.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429173984|gb|EKY15489.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 636
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 160/556 (28%), Positives = 280/556 (50%), Gaps = 60/556 (10%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
++ L +GV+P+E + + S N+ +W +AD L AI V + +++E+ L++ NH+E
Sbjct: 86 LSKALLSLGVQPQETVGILSQNTPQWSLADLACLQIRAITVPIYTTNTAEQALYVMNHAE 145
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V + + + ++ + +++ I++ + VA + E+ +++ + LG
Sbjct: 146 VKVLFVGDEKQYQKVLQVANQCPSLQMIVVC---DNEVA--LTEKQYSIHWNDFLALGSS 200
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ-IRSLYDIV 241
S+ D + + DD+ T +YTSGTTG PKGVML+++NL Q I +
Sbjct: 201 SQY------DVEFEKRLKERNLDDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLS 254
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLV 300
+N D L+ LP HV+ERA +F + + + Y NL ++ L + +P M +VP
Sbjct: 255 TVDNTDSSLAFLPLSHVFERAWTFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRF 314
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE +++ + + SS V R L R++ A KR+ L K+PS
Sbjct: 315 YEKIFATVHDKADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPS------- 358
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
IL + L +KLVYKK++ A+G K GG +L I F+++IG+ ++
Sbjct: 359 --------LILQKAYNLFDKLVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLK 410
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
+GYG+TE+ I+ SVG + + +++I E NE+L V+G V
Sbjct: 411 LGYGMTETVATISCWGDNRINPQSVGEVMPNVQVRI--GEDNEIL---------VKGGMV 459
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GY+KNP T + DG+L TGD G + +++ L + R K+ + S G
Sbjct: 460 MKGYYKNPEETAKVFTPDGYLRTGDAGNLDGNNN----------LFITERLKELMKTSNG 509
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P +E + +LI QI VI ++ A+IVP+ E + A K L+I + + ++L
Sbjct: 510 KYIAPQMIEGKVGKYNLIEQIAVIADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLI 569
Query: 600 KE-KTISLLYGELRKW 614
K + I + +L+K+
Sbjct: 570 KHSQVIEYIGKQLQKF 585
>gi|325105263|ref|YP_004274917.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
gi|324974111|gb|ADY53095.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
Length = 592
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 265/556 (47%), Gaps = 76/556 (13%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
++GL +G+K ++K+++ ++N W D G++ GA V + ++ I+ ++
Sbjct: 48 SKGLIRLGIKKDDKVAIMAENMPEWNFCDFGIMQIGAAQVPMYPTLAENDIKFIFKDADI 107
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ V + + ++ ++ + I + +K AP E I + IDL
Sbjct: 108 KVVFVSSEPLYQKLKR--IAEENGQDIKIYTFEKIDGAPHWTEIIETHDDESFIDLDEYR 165
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
K I DD+ T +YTSGTTG PKGVMLTHKNLL I + + P
Sbjct: 166 SK----------------ITGDDLLTLIYTSGTTGTPKGVMLTHKNLLSNIEASAKLYP- 208
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 302
E + LS LP H++ER Y F GI + Y ++ + +L +PH SVP + E
Sbjct: 209 EGVTRALSFLPLSHIFERMVVYMYFYLGISVYYAESLDTIVQNLSEVKPHCFTSVPRLLE 268
Query: 303 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 362
+Y ++VA+ T K+ + L K Y + +
Sbjct: 269 KVYD-------------KIVAKG-----HELTGIKKSLFFWALNLGLK---YELDGANGA 307
Query: 363 WARIICAILWPLHL-LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 420
W + L L LA KL++KK + A+G VSGG +L + + G+KV
Sbjct: 308 W--------YELQLKLARKLIFKKWKDALGGEIMLIVSGGAALQERLARVFWGAGIKVLE 359
Query: 421 GYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYGLTE+SPVI+ P G+VG P+ + E+KI AE E+L +G
Sbjct: 360 GYGLTETSPVISVNGPRKGETKFGTVGKPLFNVEVKI--AEDGEIL---------CKGPS 408
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
+M+GY+K AT++A+ E GW +TGDIG + G L + R K+ +
Sbjct: 409 LMKGYYKRDDATQEAVTEGGWFHTGDIGNLKD-----------GFLTITDRKKEVFKTAG 457
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G+ V P LE S+ I Q++V+G+++R P A+IVP+ E+V+ AKR I D +L
Sbjct: 458 GKYVAPQVLETKFKESTFIEQVMVLGENRRFPSALIVPNFEKVIEWAKRNQIAETDHQKL 517
Query: 599 SK-EKTISLLYGELRK 613
+K +K I ++ E+ +
Sbjct: 518 AKNQKVIDKIWSEVDR 533
>gi|76802721|ref|YP_330816.1| long-chain-fatty-acid--CoA ligase [Natronomonas pharaonis DSM 2160]
gi|76558586|emb|CAI50178.1| acyl-CoA synthetase [Natronomonas pharaonis DSM 2160]
Length = 651
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 266/567 (46%), Gaps = 73/567 (12%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F +++ + + + G R +GV+ + ++ +F++ W +D +LA G + +
Sbjct: 66 FESLTYETMQEIVRNLSAGFRELGVENDTRVGIFANTRMEWAQSDFAILAAGGVVTTVYT 125
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
SS ++ ++ + + + VEN E R+ E + + + FI+++
Sbjct: 126 ESSPNQVQYLLDDPNADGVVVENGELLERVLE-VEDELDLSFIVVIDDFDGHDD-----R 179
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ S E+ DLG E D+ ++R + DD+A+ +YTSGTTG PKGV LTH
Sbjct: 180 DDILSLAEVHDLGDEHFD--QDAYESRLAER----DLDDLASLIYTSGTTGKPKGVQLTH 233
Query: 228 KNLLHQIRSL-----------YDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELM 275
+N + L D+ + D+ LS LP HV+ER G+F+ F G +
Sbjct: 234 RNFRSNVNGLRKRFAPRPDKDEDLPAIDERDRVLSFLPLAHVFERVAGHFLMFGSGATVS 293
Query: 276 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
Y + + DD+Q +P SVP VYE +Y ++ + A V RA + I+ +
Sbjct: 294 YAESTDTVADDIQIVKPTGASSVPRVYERIYDSLRDE-----APEAVFNRA-VPIARQWA 347
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
N + P + L + L +KLVY ++ +G +
Sbjct: 348 -------------NTESPGLGLKL---------------KYKLMDKLVYSSVREQMGGNI 379
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
+ VSGGGSL + ++ +G+ + GYGLTE+SPV++ P G++G P+++ E+
Sbjct: 380 EFFVSGGGSLSKQLAELFDGMGIPILEGYGLTETSPVVSVNPPEDYRSGTLGPPLSNVEV 439
Query: 454 KI---VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++ V ++ + G G + V+G V +GY+ P AT++A +DGW TGDI
Sbjct: 440 RLDETVVSDDQKANADGDIGELHVKGPNVTEGYWNRPGATEEAFTQDGWFRTGDI----- 494
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ L+ R K IVL TG+N+ P +E+ S I Q +VIG +Q+
Sbjct: 495 -----IEQTDDDYLIYHDRLKQLIVLDTGKNIAPQPIEDEFATSERIDQAMVIGDNQKFI 549
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASE 597
A+ VP+ E V A + I D SE
Sbjct: 550 AALFVPNLEAVERWADKEGIDLPDDSE 576
>gi|313205896|ref|YP_004045073.1| amp-dependent synthetase and ligase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485217|ref|YP_005394129.1| polyprenyl synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|312445212|gb|ADQ81567.1| AMP-dependent synthetase and ligase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459902|gb|AFD55586.1| polyprenyl synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
Length = 594
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 162/577 (28%), Positives = 271/577 (46%), Gaps = 85/577 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ GL +G+KP +K+SL S +N W V D G+ GA+ V S E+ ++I+N++E
Sbjct: 47 SRGLLKLGIKPGDKISLISTNNRTEWAVMDLGISQIGAVTVPVYPTISVEDYIYIFNNAE 106
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
V + E + ++ S ++ I D VE P ++ EI+DLG +
Sbjct: 107 IKYCFVSDEELYQKLLSVQPSVPSLVGIFTF---------DKVEGAP--NWAEILDLGED 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV- 241
+ D +K K +DD+A+ +YTSGTTG PKGVMLTH+N++ + + I+
Sbjct: 156 EATQI-EVEDLKKGIK-----TDDLASIIYTSGTTGRPKGVMLTHQNIVSNVLTCTPILS 209
Query: 242 ---PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISV 297
P K LS LP H++ER YF + GI + + ++ + ++++ QPHYM V
Sbjct: 210 EKKPQNTNLKSLSFLPICHIFERMLFYFYINSGISIYFAESIDKMGENIKEVQPHYMTVV 269
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P + E +Y I + ++ + + + ++ A + PS L
Sbjct: 270 PRLIEKVYDKIYDKGISAGGLKAKIFLWALGVNKAKKGIGK-------------PSGLKE 316
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGV 416
+I A+KLV+KK + +G + +SG +L ++ ++ G+
Sbjct: 317 II------------------ADKLVFKKWREGLGGNIITLISGSAALAPRLNRMFQNAGI 358
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYGLTE+SPVIA +G+VG + + ++KI G + V+G
Sbjct: 359 SILEGYGLTETSPVIAVNTFNKMKVGTVGPVLPNLDVKI-----------QGDGEISVKG 407
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
V +GY+K+ T++A EDG+ TGDIG I G L + R K+
Sbjct: 408 PSVTKGYYKDDEKTQEAFTEDGYFKTGDIGHIDDE----------GFLHITDRKKEMFKT 457
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADA 595
S G+ + P +E A S I QI+V+G+ ++ P A++ PD + A+R +I +
Sbjct: 458 SGGKYIAPQMIENMAKASKFIEQIMVVGEGEKMPCALVQPDFHFAVNWAERHNINIGTTP 517
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
E++K EK I L +L W ++ P
Sbjct: 518 EEIAKSPQLKARIEKEIEHLNTKLGSWEKIKKIELTP 554
>gi|427428169|ref|ZP_18918211.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
gi|425882870|gb|EKV31549.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
Length = 670
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 252/524 (48%), Gaps = 73/524 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A+GL + G+KP +++ + S+N WL+AD +A GAI V + ++ + LHI N S
Sbjct: 57 LAQGLALRGIKPGDRVMIVSENRPEWLIADMAAMAIGAITVPAYTTNTVADHLHILNDSG 116
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ A+ V R+ + F+I + + + P + + ++I G+
Sbjct: 117 AAAVVVSTRALAKRVYAAAAQASETPFVITIDDQALAQNPGV----ETVKWMQLIHDGQP 172
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+ KH+ E +DD A +YTSGT G PKGVML+HKN+L +D++
Sbjct: 173 LGRP--------KHW--EGAEADDTACIIYTSGTGGAPKGVMLSHKNVLANCMGAFDVLE 222
Query: 243 AEN-GDK-FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVP 298
GD+ FLS LP H YE + G +F S G ++ Y + L ++ Q +P +VP
Sbjct: 223 ILGLGDEVFLSFLPLSHSYEHSAGQFFPISIGAQIYYAEGLDKLSENFQEVRPTITTAVP 282
Query: 299 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 358
++E + + I + + + + + Y A + + +K + A+
Sbjct: 283 RLFEFMRNRILRAMEKQTGTK---------VKLFYKAIE-----LGAKKYEKGLGPMEAM 328
Query: 359 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 417
+W+ R LV +K+ G KA VSGG L I LF+ A+ V
Sbjct: 329 TNWVLGR---------------LVRRKVAQRFGGRLKALVSGGAPLNYDIGLFFMALDVP 373
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
+ GYG TE++PVI+ +RP L SVG P+ E++I AE E+L RG
Sbjct: 374 ILQGYGQTEAAPVISVQRPGSVRLESVGPPLKGVEVQI--AEDGEIL---------ARGP 422
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
VM+GY+K P T++A+D +GWL+TGD+G H G +V+ R KD IV S
Sbjct: 423 MVMRGYWKGPEQTRKAIDAEGWLHTGDVG----HFDD------AGNIVITDRKKDIIVNS 472
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKE 579
G+N+ P +E I Q +V G RRP A++VPD +
Sbjct: 473 GGDNIAPARVEGFLTLEPEIAQAMVYG--DRRPHLVALLVPDPD 514
>gi|371776873|ref|ZP_09483195.1| amp-dependent synthetase and ligase [Anaerophaga sp. HS1]
Length = 635
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 161/572 (28%), Positives = 280/572 (48%), Gaps = 63/572 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSR-SSSEEL 114
+ ++++ A GL +G++ ++++L S+ WL+++ +L GAINV ++ + ++L
Sbjct: 37 VNEQVITLAAGLLYLGIQKGDRIALLSEGRNDWLISELAILRCGAINVPLSTKLEADQDL 96
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+ NHSES + V + +I + + + II+ D +EE V
Sbjct: 97 IFRLNHSESRMIMVSGFQL-PKIRQIIQEIPLIEKIIVF------DETDSLEEKEVL-LQ 148
Query: 175 EIIDLGRESRKAFSDS-NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
EI G + + S S D RK Y +D+A YTSGTT PKG+ML+H+N
Sbjct: 149 EIYQRGTQFLETNSKSVEDRRKEIHY-----NDVANISYTSGTTAQPKGIMLSHRNYTAN 203
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFS-RGIEL--------MYTAVRNLKD 284
+ + + + + L++LP H + + F RG + ++N
Sbjct: 204 VEQAFSYIDIPSHYRTLAVLPWDHAFAHTAALYAFMYRGASIASVQAGKTQLETLKNFAQ 263
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
+++ +PH ++SVP + + I+K + A+ V L R++ Y + Y G
Sbjct: 264 NIREIKPHVLMSVPAIAKNFRKNIEKGVM----AKGKVIYTLFRVAMKYAVW---YNG-- 314
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL- 403
T N + + + + +PL+ L + L++K I++ G + GGG+L
Sbjct: 315 -TGNNR-------------GKGLKKLTYPLYYLFDNLIFKTIRANFGGNLQFFIGGGALL 360
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ + F+ AIG+ + GYGL+E+SP+I+A P + +GS G +N+ +IKI D E+ +
Sbjct: 361 DIELQKFFYAIGIPMYQGYGLSEASPIISANTPAHHKMGSSGRTVNNLDIKICD-ESGKA 419
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
LP G G + ++G VM GY+KN ATK+ + ++GWL TGD+G++ G
Sbjct: 420 LPPGQSGEIVIKGENVMLGYWKNEEATKETI-KNGWLYTGDLGYLDKD----------GY 468
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
L + GR K ++ S GE P +EEA + LI Q V+ +IVP+ E+V+
Sbjct: 469 LYVLGRFKSLLISSDGEKYSPEGIEEAVIDHCELIDQCVLHNNQNPYTIGLIVPNAEKVV 528
Query: 583 MAAKRLSIVHADASELSKEKTISLLYGELRKW 614
K LS + E EKT+ + EL ++
Sbjct: 529 QYFKSLS--NHLTKEQKLEKTLLAIQEELSQF 558
>gi|149277989|ref|ZP_01884128.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
gi|149231187|gb|EDM36567.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
Length = 637
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 259/522 (49%), Gaps = 56/522 (10%)
Query: 76 EKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFN 135
+++ L +NS ++ DQG+ GAINV S +E+ +I N S A+ + NP F
Sbjct: 65 DRMGLIIENSPEYVFYDQGIQQIGAINVSIYPTLSEQEVAYIINDSGMKAILIGNPFLFK 124
Query: 136 RIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL-GRESRKAFSDSNDAR 194
+I + + +++II + +A V SY I++L GR +++ + + R
Sbjct: 125 KITKIASNCRQLQYIIPAFADYEKIALPEDFSTEVISYAAILELKGRLTKERLFEISTLR 184
Query: 195 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSML 253
+ D ++ +YTSGTTG PKGVML+H NL+ ++ + +P + + FLS L
Sbjct: 185 N-----AVLPSDTSSLIYTSGTTGTPKGVMLSHSNLVENVKVCLEQIPVIDETETFLSFL 239
Query: 254 PPWHVYERACGYFIF-SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 311
P HV+ER Y + ++G ++ + ++ L ++ +P M VP + E ++ K
Sbjct: 240 PLSHVFERTATYHVCCAQGCKIAFAQSLELLAKNMGEIRPTVMNCVPRLLERIHD---KA 296
Query: 312 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 371
I + +A + ++ + A ++ I E N K P L A
Sbjct: 297 IKSGTADGGLKSKIFLWALEAGQQYRNIKE------NGKTPGLLSA-------------- 336
Query: 372 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 430
LAEKLV+ KI+ G + K +SGG +LP ++ F+ +G+K+ G+GLTE+SPV
Sbjct: 337 -GKKALAEKLVFSKIKEKTGGNLKFMISGGAALPKNVGEFFGNLGIKILEGFGLTETSPV 395
Query: 431 IAARRPTCNVLGSVGHPINHTEI--------KIVDAETNEVLPAG---SKGIVKVRGSQV 479
+A V G+VG I EI K+++ +T+E +G + VRG V
Sbjct: 396 MAVTEFHRQVYGTVGRVIPGIEIGIQHVETKKMINIQTHETFKENFECEEGEIIVRGHCV 455
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
MQGYF P+ T +A+D+D W +TGDIG R G L + R K+ IV + G
Sbjct: 456 MQGYFNKPAETAEAIDKDNWFHTGDIG-----------RFYKGNLQITDRLKNMIVNAYG 504
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
+NV P +E L+S I + +IG + A ++P++E +
Sbjct: 505 KNVYPTPVENNYLKSLKIDGLFLIGDKREYLTAFVIPNRENM 546
>gi|448607753|ref|ZP_21659706.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445737690|gb|ELZ89222.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 668
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 249/533 (46%), Gaps = 70/533 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS ++ ++ +
Sbjct: 77 LAAGFRDLGIESGDRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQVQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ A+ VEN E R+ + + +RFI++ + E D+++ LG
Sbjct: 137 ANAVVVENEELLERVL-AIEDELDLRFIVV-----------VDEYDGRDDRDDVLTLGEL 184
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IV 241
R+ ++A + +D+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 185 YRRGEGVYDEAAAESWLDERDPEDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRRFG 244
Query: 242 P-AENGDK--------FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
P + GD LS LP HV+ER G+F+ F+ G + Y + L++D Q +
Sbjct: 245 PRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLAR 304
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 305 PTVGTSVPRVYEKLYDAIRTQASESPAKKRVFEWA-VGVGQAY-------------HTTD 350
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 351 APGYL---------------LTAKHRLADRLVFGQVREALGDNIDFFISGGGSLSAELCA 395
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAG 467
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ E K+ + L G
Sbjct: 396 LYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRTVETKLDATVVGDRLGDAGG 455
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGV 523
G + VRG V +GY+ +P T+ A ED W TGD+ RR G
Sbjct: 456 EVGELLVRGPSVTEGYWNDPEETEAAFVEDDEAERWFRTGDV----------VERRPDGY 505
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 506 IAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|315504530|ref|YP_004083417.1| amp-dependent synthetase and ligase [Micromonospora sp. L5]
gi|315411149|gb|ADU09266.1| AMP-dependent synthetase and ligase [Micromonospora sp. L5]
Length = 600
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 252/539 (46%), Gaps = 74/539 (13%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ R V C + E++ A+GL GV P +++ L S W + D + A GA+ V
Sbjct: 43 DAREDVTCR-QFRDEVVAVAQGLIAAGVSPGDRVGLMSRTRYEWTLFDYAIWAAGAVTVP 101
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
SS+E+ I S +VA+ VE+ +A +R + W
Sbjct: 102 IYETSSAEQAAWILGDSGAVAVVVESTAHATMVAGVRDRLPELREV---W---------- 148
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+I + + D+++ G + + A + + +DD+AT +YTSGTTG PKG +
Sbjct: 149 --QIDLGAVDDLVAAG-------ASVDRAEVETRRSLLKADDVATIIYTSGTTGRPKGCV 199
Query: 225 LTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
LTH+N+ I + ++P G L LP H + R + + + A +N
Sbjct: 200 LTHRNIYSDIANAVPVLPNLFRQGASTLLFLPLAHAFARLIQVGVVHARATMAHCADTKN 259
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
L +LQ ++P +++SVP V+E +Y+G +Q S ++ RA +++ A++ + +
Sbjct: 260 LVAELQDFKPTFVLSVPRVFEKVYNG-ARQKAESEGKGKIFDRAE-KVAIAWSEAQELPG 317
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGG 400
G L L H L +KLVY+K+++A+G + +SGG
Sbjct: 318 GPGLG------------------------LRAQHALFDKLVYRKLRAAMGGRCRDAISGG 353
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L + F+ +GV + GYGLTE+SP AA PT +G+VG P+ I+I D
Sbjct: 354 APLGARLGHFFRGVGVTICEGYGLTETSPAAAANLPTGTRIGTVGRPLPGVTIRIDD--- 410
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
G V + G V QGY+ N +AT +A+ DGW TGD+G +
Sbjct: 411 --------DGEVLIAGDIVFQGYWHNDAATAEAISTDGWFRTGDLGHLDDD--------- 453
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G L + GR K+ IV + G+NV P LE+ LI Q VV+G Q A++ D+E
Sbjct: 454 -GYLSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVVGDRQPFIAALVTIDEE 511
>gi|399577910|ref|ZP_10771662.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
gi|399237352|gb|EJN58284.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
Length = 658
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 169/593 (28%), Positives = 277/593 (46%), Gaps = 69/593 (11%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +GV E++ LF+ W D +LA G + + SS ++ ++ +
Sbjct: 77 LAAGFRELGVADGERVGLFAHTRMEWAQCDFALLAAGGVVTTVYTSSSERQVKYLLGDPD 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIVEEIPVFSYDEIIDLG 180
+ + VEN + R+ + + F++++ S ++ I + ++S ++ + G
Sbjct: 137 ASGVVVENADCLRRVL-AVEDDLDLEFVVVMDEIPDGSGMSGAIRDRDDIYSLADVHETG 195
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-- 238
++ A DA + + E DD+A+ +YTSGTTG PKGV LTH+N + +
Sbjct: 196 VDAYDA-----DAYETWVDEP-AMDDLASLIYTSGTTGQPKGVQLTHRNFRANVNQCFRR 249
Query: 239 --------DIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQR 288
D + LS LP HV+ER G Y +F+ G + Y + L++D Q
Sbjct: 250 FGPRPDDPDRLAITPDSTTLSFLPLAHVFERLAGHYLMFAAGATVAYAESPDTLREDFQL 309
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P SVP VYE LY I+ Q S R+ A + + AY G LT
Sbjct: 310 VRPTTGTSVPRVYEKLYDAIRTQASESPVKERIFEWA-VGVGQAYHEVDN--PGTALTLK 366
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
H +A++LV+ +++ AIG + +SGGGSL +
Sbjct: 367 --------------------------HRIADRLVFSQVREAIGGRLEFFISGGGSLSADL 400
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--- 464
Y +G+ + GYGLTE+SPV++ P +G++G P+ EI+I ++ EV
Sbjct: 401 CALYHGMGLPILEGYGLTETSPVVSVNPPNGPKIGTIGTPVVDVEIEIDESVVGEVQRRE 460
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G G + V+G V GY+ P T+Q+ E GW TGDI + P G +
Sbjct: 461 TEGQVGELLVKGPNVTSGYWNRPEETEQSFTE-GWFRTGDIVHLRPD----------GYI 509
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
RAK +VLSTG+NV P +E+A + L+ Q +V+G ++ A++VP+ E V
Sbjct: 510 EFRERAKQLLVLSTGKNVAPGPIEDAFASNQLVEQCLVLGDGKKFVSALLVPNVEAVHEW 569
Query: 585 AKRLSI-VHADASELSKEKTI-SLLYGELRKWTSKCSF--QIGPIHVVDEPFT 633
A R I + D +L++++ + + L E+ + + QI +V E FT
Sbjct: 570 ADREGIDLPEDRRKLARDERLRARLQREVDQVNERLESYEQIKQFRIVTEEFT 622
>gi|89075579|ref|ZP_01161984.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
gi|89048719|gb|EAR54291.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
Length = 607
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 253/549 (46%), Gaps = 59/549 (10%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
++I A L G++ ++K+ +FS+N W +AD L I V S+ ++ +I
Sbjct: 43 EQIQQLALALLCQGLQVQDKVGIFSNNMPGWTIADFATLYNRCITVPIYPTSTEQQAAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
+ L V + E + I+ L S I E Y+ +
Sbjct: 103 LQDASVKVLFVGEQAQMDAAVEIAAQCPQLERIVAL-----SDDVTIPEHPLACHYNAFV 157
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+ D+ A K DD+ T +YTSGTTG PKGVML + N+ QI +
Sbjct: 158 KQASGEYQQEFDTRLAEKQM-------DDLVTLIYTSGTTGTPKGVMLDYANIASQIEAH 210
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMIS 296
+ + GD L LP HV+ERA ++ RG+ Y + N LK+ L +PHYM +
Sbjct: 211 DQRLALDEGDTSLCFLPLSHVFERAWTFYALHRGVVNCYLSDTNKLKEALITVKPHYMSA 270
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP V+E +YSGI ++ + R+++ + + A + + ++PS+L
Sbjct: 271 VPRVFEKIYSGIHDKVSRAPLHRKMIFTWAVNMGAKMAAAR---------QECREPSWL- 320
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 415
L ++LAEK+V K+Q+ +G + K GG L I F+ AIG
Sbjct: 321 --------------LKKSYVLAEKVVLSKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIG 366
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ V++GYG+TE++ ++ +C S+G P+ E+KI E NE+L VR
Sbjct: 367 INVKLGYGMTETTATVSCWDDSCYNPDSIGMPMPGAEVKI--GEQNEIL---------VR 415
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+ P T + EDG+L TGD G++ G L + R K+ +
Sbjct: 416 GPMVMRGYYNMPEETAKNFTEDGFLKTGDAGYLDEQ----------GNLFITDRIKELMK 465
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P +E A + I QI VI ++ A+IVP E + A+ L+I + D
Sbjct: 466 TSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFETLEEHARELNIKYKDR 525
Query: 596 SELSKEKTI 604
EL K I
Sbjct: 526 LELVKHSQI 534
>gi|407452010|ref|YP_006723735.1| long-chain acyl-CoA synthetase [Riemerella anatipestifer RA-CH-1]
gi|403312994|gb|AFR35835.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-CH-1]
Length = 585
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 270/562 (48%), Gaps = 73/562 (12%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++ I A L+ IGVK +K++++SDNS W++ D +L+ GAI+V S + ++
Sbjct: 36 FKRTIFKTANALKDIGVKEGDKVAIYSDNSAEWIIFDLAVLSLGAISVPIYSTNGKQQTQ 95
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
H S + + V N E ++ +E + ++++FII KK++ V +
Sbjct: 96 HCIQDSGASIVFVGNQEQYDICSEIMEETSSLKFIIA--AKKTT----------VLRHSN 143
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
I L ++K D +E D D++T +YTSGT+G PKGVMLTH NL+
Sbjct: 144 SIHLENLTQKGSED---------FEVCPRDKSDLSTILYTSGTSGTPKGVMLTHGNLIDC 194
Query: 234 IRSLYDIVPAEN--GDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 290
++ D +N + L+ LP H++ER+ F S+G ++ + + + L+ +
Sbjct: 195 FQAHTDFFKFKNFENETSLAFLPLSHIFERSWTLFCLSKGAKVSFLENTKLIAHALEEVK 254
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP Y+ +Y +++ + SS+ ++ + + I + ++ R K
Sbjct: 255 PSMMCAVPRFYQKIYGALREMVEKSSSTKKKIFDWALNIGTQCSEYR---------RKGK 305
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 409
+ +AL D +A KLV+ KI+ +G + + GG ++ I
Sbjct: 306 SVPFGLALKD---------------KIASKLVFNKIKQKLGGNLWFMPCGGAAISPEILK 350
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F++A+G+ + VGYGLTE++ + + G PI T+IKI E NE+L
Sbjct: 351 FFDAMGIHITVGYGLTETTATLTCFPAYNYEYETAGIPIGDTQIKI--GEHNEIL----- 403
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
V+GS VM+GY+ P T +A EDGW TGD G I G L + R
Sbjct: 404 ----VKGSGVMKGYYNLPEETAKAFTEDGWFRTGDAGVIE-----------NGTLKITDR 448
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD + S G+ + P +E S+ I+Q +V+ + + A+IVP+ E + K +
Sbjct: 449 IKDLMKTSNGKYITPQVIENILTNSNYIQQAMVVAEGKPFVTAVIVPNFEALKEKVKAMK 508
Query: 590 IVHADASELSKEKTISLLYGEL 611
+ D +E+ + I+ Y ++
Sbjct: 509 LSMTDWNEIVSSEKITQFYHDI 530
>gi|197118507|ref|YP_002138934.1| AMP-forming acyl-CoA synthetase [Geobacter bemidjiensis Bem]
gi|197087867|gb|ACH39138.1| acyl-CoA synthetase, AMP-forming [Geobacter bemidjiensis Bem]
Length = 603
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 161/572 (28%), Positives = 264/572 (46%), Gaps = 65/572 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
R+N ++ ++ L + GLR + +KP +++++ S+N W++AD G+L G +
Sbjct: 29 RKNGQWVTLSYAQFYNRALMVSRGLRKLRMKPGDRIAILSENRAGWIIADMGILCGGGVT 88
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V + + +++ + + E+ + V + ++ + + + +I A
Sbjct: 89 VPVYATGTPDQIAYALSSCEARIVFVSGKVQYRKLLQVRDALPHLEHVISFERFLGEAA- 147
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
+PV ++ ++ E D+ A +++ + AT +YTSGTTG PKG
Sbjct: 148 -----LPVTTFYQL----SEVDDPILDTERAEIDSVIDSLTPEMPATIIYTSGTTGTPKG 198
Query: 223 VMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AV 279
+LTH NL+ + + D V D FLS LP HV+ER+ GY++ S G + + ++
Sbjct: 199 AVLTHGNLVFDVWATLDKVGGVGQEDLFLSFLPLSHVFERSVGYYLPLSCGAAIAFADSM 258
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--SFAYTAFK 337
+ +++ P M+ VP +E +YS I + + S +R + R + + S+ Y +
Sbjct: 259 EKISENMMELHPTIMVCVPRFFEKIYSRIYEAVHQLSLFKRKMFRRALAVGRSYVYARYI 318
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
Y F L+ H +A++LV+ K++S G K
Sbjct: 319 DKYVPFWLSFQ--------------------------HAIADRLVFSKLRSRFGDRLKFC 352
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
SGG L I+ F+ IGV V GYGLTE+SPV+ + GSVG P+ TEI I
Sbjct: 353 ASGGAPLDREINEFFWIIGVPVFEGYGLTETSPVLCSNSYNGLRFGSVGTPLAFTEIAI- 411
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
G V RG QVM GY+ + +ATK+AL DGW TGDIG
Sbjct: 412 ----------AGDGEVLARGPQVMAGYYNDEAATKEAL-VDGWFRTGDIG---------- 450
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
R G L + R KD IV + G+N+ P +E R I Q V G + A++VP
Sbjct: 451 -RLEEGFLYITDRKKDLIVTAGGKNIAPQPIENLLKRDKYISQAYVYGDRKPYLTALLVP 509
Query: 577 DKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
E +L A+ I + D +L + + LY
Sbjct: 510 TLERLLEFAQERRIAYHDLEDLVVHQPVIELY 541
>gi|282898837|ref|ZP_06306824.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
gi|281196364|gb|EFA71274.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
Length = 289
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 391 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEMIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
T++KIV ET + LP G G+V ++G QVM GY++N ATKQ +D DGW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPPGKIGLVLLKGPQVMGGYYQNLEATKQVIDNDGWFNSGDLGWVTP 126
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 571 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 616
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 617 -----KCSFQIGPIHVVDEPFTV 634
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRVDDRIGPFKLIPEPFSM 259
>gi|448737723|ref|ZP_21719758.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
gi|445803279|gb|EMA53577.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
Length = 643
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/570 (28%), Positives = 274/570 (48%), Gaps = 79/570 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ LF++ W D +LA G + + SS +++ ++ +
Sbjct: 76 LAAGFRSLGIEAGDRVGLFANTRMEWAQTDFAVLAAGGVVTTVYTSSSPDQVEYLLDDPG 135
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILL-----WGKKSSVAP-DIVEEIPVFSYDEI 176
+ + VEN E R+ + + + F++ + +G + V V E V S+++
Sbjct: 136 ATGVVVENQELLERVL-AVEDELDLDFVVSMDSIEGYGDREDVLTLAQVHERGVGSFEQ- 193
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
+ + D+ D DD+A+ VYTSGTTG PKGV LTH+N +
Sbjct: 194 -----SDYEGWLDARDP-----------DDLASLVYTSGTTGQPKGVRLTHRNFKANVDQ 237
Query: 237 LYD-IVPAEN-GD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKD 284
+Y P E+ GD LS LP HV+ER G+F+ F+ G + Y + L++
Sbjct: 238 VYRRFGPREDKGDLPTIDPDVSTLSFLPLAHVFERLAGHFLMFAAGASVAYAESPDTLQE 297
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
D P SVP VYE LY I++Q + SA R + + + Y +R G
Sbjct: 298 DFPLVTPSTGTSVPRVYEKLYDSIREQA-SESALRERIFEWAVDVGREYQ--ERESPGLS 354
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
L + LA++LV+++++ +G + + +SGGGSL
Sbjct: 355 LRAKRA--------------------------LADRLVFEQVREGVGGNIEFFISGGGSL 388
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ ++ +G+ + GYGLTE++PV+A P +G++G P+ E+K+ + +
Sbjct: 389 SPELGRLFDGMGLPILEGYGLTETAPVVAVNPPEAPEIGTIGPPVVDEEVKVDASVVPDD 448
Query: 464 LPA-GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
L A G G + VRG V GY++NP AT+ + D + W TGD+ RR G
Sbjct: 449 LDADGEVGELLVRGPNVTDGYWENPEATEDSFDGN-WFRTGDV----------VERRPDG 497
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
+ R+K +VLSTG+NV P +E+A + L+ Q +V+G ++ ++VP++E V
Sbjct: 498 YIAFRERSKQLLVLSTGKNVAPGPIEDAFAQRQLVEQCMVLGDGEKFVSGLVVPNEERVR 557
Query: 583 MAAKRLSI-VHADASELSKEKTISLLYGEL 611
A+ I + D+S L + + + GE+
Sbjct: 558 KWAREEGIDLPDDSSALCQNEHVQARIGEV 587
>gi|292656046|ref|YP_003535943.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|448290037|ref|ZP_21481193.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|291372084|gb|ADE04311.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|445580429|gb|ELY34808.1| acyl-CoA synthetase [Haloferax volcanii DS2]
Length = 666
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 250/534 (46%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +LA G + + SS + ++ +
Sbjct: 77 LAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLAAGGVVTTVYTSSSERQTQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS-YDEIIDLGR 181
+ A+ VEN R+ + + +RFI+ +V+E ++++ LG
Sbjct: 137 ADAVVVENEALLERVL-AVEDELDLRFIV------------VVDEYDGHDDREDVLTLGE 183
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-I 240
R+ ++A + +D+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRRGEEAYDEAAYESWLDERDPEDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRF 243
Query: 241 VP-AENGDK--------FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
P + GD LS LP HV+ER G+F+ F+ G + Y + L++D Q
Sbjct: 244 GPRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 304 RPTVGTSVPRVYEKLYDAIRAQASESPAKKRVFEWA-VGVGQAY-------------HTT 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 350 DAPGYL---------------LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+ + L
Sbjct: 395 ALYHAMGLPIYEGYGLTETSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRG V +GY+ +P T+ A ED W TGD+ RR G
Sbjct: 455 GEVGELLVRGPSVTEGYWNDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDG 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|407452392|ref|YP_006724117.1| hypothetical protein B739_1625 [Riemerella anatipestifer RA-CH-1]
gi|403313376|gb|AFR36217.1| hypothetical protein B739_1625 [Riemerella anatipestifer RA-CH-1]
Length = 593
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 164/577 (28%), Positives = 273/577 (47%), Gaps = 85/577 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ GL +G+KPE+K+SL S +N W V D G+ A+ V S E+ ++I+N++E
Sbjct: 47 SRGLLKLGIKPEDKISLISTNNRTEWAVMDLGISQIRAVTVPVYPTISVEDYVYIFNNAE 106
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
V + E + ++ S ++ I D VE P ++ EI+DLG +
Sbjct: 107 IKYCFVSDGELYQKLLAVQPSVPSLVGIFTF---------DKVEGAP--NWSEILDLGED 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV- 241
+ D +K K +DD+A+ +YTSGTTG PKGVMLTH+N++ + + I+
Sbjct: 156 ETTQI-EVEDLKKGIK-----TDDLASIIYTSGTTGRPKGVMLTHQNIVSNVLTCTPILS 209
Query: 242 ---PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISV 297
P + K LS LP H++ER YF + GI + + ++ + ++++ +PHYM V
Sbjct: 210 EKKPQDTNLKSLSFLPICHIFERMLFYFYINSGISIYFAESIDKMGENIKEVKPHYMTVV 269
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P + E +Y I + ++ + A+ + A K I +PS L
Sbjct: 270 PRLIEKVYDKIYDKGISAGGLK---AKIFLWALGVNKAKKEI----------GKPSGLKE 316
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGV 416
+I A+KLV+KK + +G + +SG +L ++ ++ G+
Sbjct: 317 II------------------ADKLVFKKWREGLGGNIITLISGSAALAPRLNRMFQNAGI 358
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYGLTE+SPVIA +G+VG + + ++KI G + V+G
Sbjct: 359 SILEGYGLTETSPVIAVNTFNKMKVGTVGPVLPNLDVKI-----------QGDGEISVKG 407
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
V +GY+K+ T++A EDG+ TGDIG I G L + R K+
Sbjct: 408 PSVTKGYYKDEEKTQEAFTEDGYFKTGDIGHIDDE----------GFLHITDRKKEMFKT 457
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADA 595
S G+ + P +E A S I QI+V+G+ ++ P A++ PD + A+R +I +
Sbjct: 458 SGGKYIAPQMIENMAKASKFIEQIMVVGEGEKMPCALVQPDFHFAVNWAERHNINIGKTP 517
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
E++K EK I L +L W ++ P
Sbjct: 518 EEIAKNPQFKARIEKEIEYLNTKLGNWEKIKKIELTP 554
>gi|167856072|ref|ZP_02478815.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219871804|ref|YP_002476179.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
gi|167852821|gb|EDS24092.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219692008|gb|ACL33231.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
Length = 595
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 165/600 (27%), Positives = 294/600 (49%), Gaps = 73/600 (12%)
Query: 14 LSSLDYHR-HGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGV 72
++SLD+H + FR+ + ++ A R R +++ +QEI F+ L +
Sbjct: 1 MASLDFHFVNRFRLQAKKWLNRTALRFR---EQAQWQEMSWQTFQQEIDRFSYALIAQHI 57
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPE 132
++K+ +F++N RW +AD G + A+ V + ++++++ +I N ++ L V + E
Sbjct: 58 DIQDKIGIFANNMPRWTIADFGAMQARAVAVPIYATNTAKQVEYIVNDADIKILFVGDQE 117
Query: 133 FFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY-DEIIDLGRESRKAFSDSN 191
+++ + + + I+ + K+++ + ++P Y ++ +D+ N
Sbjct: 118 QLDQVCQIANNCPQLMKIVAM---KANMD---LRDLPNACYWEDFLDVV---------PN 162
Query: 192 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-L 250
+A + + D+ T +YTSGTTG PKGVML + NL HQ+ + +D+ N D L
Sbjct: 163 EAEFEKRLNSKQLSDLFTLIYTSGTTGEPKGVMLDYANLAHQLNA-HDLALNVNEDDVSL 221
Query: 251 SMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQ 309
S LP H++ERA ++F RG Y N ++D L +P M +VP YE +Y+ +
Sbjct: 222 SFLPLSHIFERAWVAYVFHRGATNCYLEDTNHVRDALTTLKPTVMCAVPRFYEKIYTAVW 281
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
++ + A RR + IR+ ++ Y+ +QPS W R+ A
Sbjct: 282 DKVEKAPAHRRALFNWAIRVG------EKHYQT-------EQPSQ--------WLRLQYA 320
Query: 370 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 428
LA+KLV K+++ +G K GG L I F+ +IG+ +++GYG+TE++
Sbjct: 321 -------LADKLVLTKLRALLGGRIKMMPCGGAKLEASIGSFFHSIGINIKLGYGMTETT 373
Query: 429 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 488
++ + S+G + + E+KI E NE+L VRG VM+GY+K P
Sbjct: 374 ATVSCWQDKGFNPNSIGTLMPNAEVKI--GEENEIL---------VRGGMVMRGYYKKPE 422
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
T +A EDG+L TGD+ G CG + + + R K+ + G+ + P +E
Sbjct: 423 ETAKAFTEDGFLRTGDV---------GEMDSCGNLFITD-RLKELMKTLNGKYIAPQYIE 472
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
+ I QI VI ++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 473 GKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRIELIKHSDIIQMF 532
>gi|386322121|ref|YP_006018283.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-GD]
gi|416111912|ref|ZP_11592936.1| Long-chain-fatty-acid--CoA ligase [Riemerella anatipestifer RA-YM]
gi|442314917|ref|YP_007356220.1| hypothetical protein G148_1222 [Riemerella anatipestifer RA-CH-2]
gi|315022208|gb|EFT35236.1| Long-chain-fatty-acid--CoA ligase [Riemerella anatipestifer RA-YM]
gi|325336664|gb|ADZ12938.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-GD]
gi|441483840|gb|AGC40526.1| hypothetical protein G148_1222 [Riemerella anatipestifer RA-CH-2]
Length = 594
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 270/577 (46%), Gaps = 85/577 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ GL +G+KP +K+SL S +N W V D G+ G + V S E+ ++I+N++E
Sbjct: 47 SRGLLKLGIKPGDKISLISTNNRTEWAVMDLGISQIGTVTVPVYPTISVEDYIYIFNNAE 106
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
V + E + ++ S ++ I D VE P ++ EI+DLG +
Sbjct: 107 IKYCFVSDKELYQKLLSVQPSVPSLVGIFTF---------DKVEGAP--NWAEILDLGED 155
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV- 241
+ D +K K +DD+A+ +YTSGTTG PKGVMLTH+N++ + + I+
Sbjct: 156 EATQI-EVEDLKKGIK-----TDDLASIIYTSGTTGRPKGVMLTHQNIVSNVLTCTPILS 209
Query: 242 ---PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISV 297
P K LS LP H++ER YF + GI + + ++ + ++++ QPHYM V
Sbjct: 210 EKKPQNTNLKSLSFLPICHIFERMLFYFYINSGISIYFAESIDKMGENIKEVQPHYMTVV 269
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P + E +Y I + ++ + + + ++ A + PS L
Sbjct: 270 PRLIEKVYDKIYDKGISAGGLKAKIFLWALGVNKAKKGIGK-------------PSGLKE 316
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGV 416
+I A+KLV+KK + +G + +SG +L ++ ++ G+
Sbjct: 317 II------------------ADKLVFKKWREGLGGNIITLISGSAALAPRLNRMFQNAGI 358
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYGLTE+SPVIA +G+VG + + ++KI G + V+G
Sbjct: 359 SILEGYGLTETSPVIAVNTFNKMKVGTVGPVLPNLDVKI-----------QGDGEISVKG 407
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
V +GY+K+ T++A EDG+ TGDIG I G L + R K+
Sbjct: 408 PSVTKGYYKDDEKTQEAFTEDGYFKTGDIGHIDDE----------GFLHITDRKKEMFKT 457
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADA 595
S G+ + P +E A S I QI+V+G+ ++ P A++ PD + A+R +I +
Sbjct: 458 SGGKYIAPQMIENMAKASKFIEQIMVVGEGEKMPCALVQPDFHFAVNWAERHNINIGTTP 517
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
E++K EK I L +L W ++ P
Sbjct: 518 EEIAKSPQLKARIEKEIEHLNTKLGSWEKIKKIELTP 554
>gi|448739566|ref|ZP_21721578.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
gi|445799185|gb|EMA49566.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
Length = 653
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 280/581 (48%), Gaps = 86/581 (14%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L+ + A G R +GV+ ++++ +FS + W AD +LA GA+ SS ++
Sbjct: 71 ELQSIVRSLAAGFRDLGVESDDRIGIFSASRMEWAQADFALLAAGAVVTTVYKESSPRQV 130
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI-VEEIPVFSY 173
++ + + + V++ + R+ + + + F+++L DI + VF+
Sbjct: 131 EYLLDDPGATGVIVDSRDRLERVLD-VEDALDLEFVVVL--------DDISTDRDGVFTI 181
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL--- 230
E+ + G +AF + A + + E SDD+A+ +YTSGTTG PKGV +TH+N
Sbjct: 182 SEVYERGE---QAFDRA--AYERWLSERT-SDDLASLIYTSGTTGKPKGVRMTHRNFRAN 235
Query: 231 LHQIRSLYDIVPAENGD--------KFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVR 280
++Q+R + P ++ D LS LP HV+ER G +F+F+ G + Y +
Sbjct: 236 INQLRKRFGDRPDKSADLPSVGRETVALSFLPLAHVFERLAGHFFLFASGATVAYAESAD 295
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ +D++ QP SVP +YE ++ +++ S+ RR+ RA+ A KR
Sbjct: 296 TVAEDIRTVQPTTATSVPRIYERIFDSMREDA-DSAIRRRIFERAV-------AAAKR-- 345
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
T + P + LA++LVY ++ A+G + + +SG
Sbjct: 346 -----TSRRDDPGRTLRF---------------ERALADRLVYSTVKEAMGGNIEFFISG 385
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
GGSL + ++ + + + GYGLTE++PV++ P G++G + E ++ DA
Sbjct: 386 GGSLSPELARLFDGMDLPIYEGYGLTEAAPVVSVNPPEAPKPGTLGPALTGVETRL-DAS 444
Query: 460 TNEVLPA------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
VLPA G G + VRG V GY++NP T ++DGWL TGDI
Sbjct: 445 ---VLPADQYDRDGDVGELLVRGPNVTDGYWENPEETDADFEDDGWLRTGDI-------- 493
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
R G V R K +VLSTG+NV P +E+A S + Q +V+G D++ A+
Sbjct: 494 --VERDVDGYFVYHERLKQLLVLSTGKNVAPGPIEDAFATSERVEQAMVLGDDEKFVSAL 551
Query: 574 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 614
+VP+ E + A R ++ EL E+ R+W
Sbjct: 552 VVPNFEGLRAWAARKNV------ELPSERAALCRDENAREW 586
>gi|429748961|ref|ZP_19282118.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169511|gb|EKY11261.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 599
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 282/570 (49%), Gaps = 61/570 (10%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G+ ++ + + S N +W + D L AI+V + +++E+ L++ NH+E L V
Sbjct: 57 MGILAQDTVGILSQNMPQWTLTDLACLQIRAISVPIYTTNTAEQALYVMNHAEIKVLFVS 116
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSD 189
+ +N+ E A+++ I++ + KK ++ E + + + LG +D
Sbjct: 117 DELQYNKALEVAERCASLQKIVV-FNKKVALK----EAKYSMHWADFLALGA------TD 165
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 249
+A + DD+ T +YTSGTTG PKGVMLT++NL Q+ + + ++ D
Sbjct: 166 KQNAVLEKRLAERNLDDLFTIIYTSGTTGQPKGVMLTYENLAFQMVGHSERLAVDDSDSS 225
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGI 308
L LP HV+ERA F + + + Y + N +++ L +P M +VP YE +++ +
Sbjct: 226 LCFLPLSHVFERAWTCFCLYKCVPVYYLSDTNKVREALAEVRPTLMCAVPRFYEKIFATV 285
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
+ SS +RV+ +A ++ A K E +PS+ WL
Sbjct: 286 HDRADASSFVKRVLFKAAVKTGKRMIALKEANE---------KPSF------WLQQT--- 327
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+ L +KLVY K++ A+G K GG +L I F+++IG+ V++GYG+TE+
Sbjct: 328 ------YNLFDKLVYSKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINVKLGYGMTET 381
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
+ I+ L SVG + + +I+I E NE+L V+G VM+GY+KNP
Sbjct: 382 TATISCWGDDKFDLQSVGEVMPNVQIRI--GEENEIL---------VKGGMVMKGYYKNP 430
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T + DG+L TGD G + +++ V + E R K+ + S G+ + P +
Sbjct: 431 EETAKVFTNDGYLRTGDAGNLDGNNN---------VFITE-RIKELMKTSNGKYIAPQHI 480
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 606
E + +LI QI VI +R A+IVP+ E + K L+I + + ++L K+ + I
Sbjct: 481 EGKVGKYTLIEQIAVIADGKRFVSALIVPNFEALSQVMKELNIKYKNTADLLKQSQVIEY 540
Query: 607 LYGELRKWTSKCS--FQIGPIHVVDEPFTV 634
+ +L+K+ S QI ++ FT+
Sbjct: 541 ISKQLQKFQSDLPDYEQIKKFTLLPTAFTI 570
>gi|340622356|ref|YP_004740808.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339902622|gb|AEK23701.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 597
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/598 (27%), Positives = 298/598 (49%), Gaps = 63/598 (10%)
Query: 22 HGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILD-FAEGLRVIGVKPEEKLSL 80
H VF +N VD A++ + R + K ++ D ++ L G++P++ + +
Sbjct: 7 HYVNVFRKN-VDKYASKNALMHRTSTGWEGIDWKTFGQMTDTLSKALLAFGIQPQDTVGI 65
Query: 81 FSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAET 140
FS N +W +AD L AI V + +++E+ + NH+E L V E +++
Sbjct: 66 FSQNMPQWTIADLATLQIRAITVPIYATNTAEQAAFVVNHAEIKMLFVGGEEQYDKALAF 125
Query: 141 LCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYE 200
+++ IIL+ K ++ + E+ ++++ I G ++ DA+ + E
Sbjct: 126 AEKSPSLQKIILM---KDNIP--LKEKQWSITWEDFIKYGASAKL------DAQLQTQIE 174
Query: 201 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVY 259
+D+ T +YTSGTTG+PKGVML ++NL HQ+++ +DI + + D L+ LP HV+
Sbjct: 175 NRSLNDLFTIIYTSGTTGDPKGVMLDYENLAHQLKN-HDIRLKLSSEDVSLAFLPLSHVF 233
Query: 260 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 318
ERA ++ +G Y +K L +P M +VP YE ++ + I +S
Sbjct: 234 ERAWTFYSLYKGATNHYLENPLEIKSALLEVKPTVMCAVPRFYEKVFGTVYDMISGASLV 293
Query: 319 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 378
+R+V SFA + K++ + + K+PS+ L + ++
Sbjct: 294 KRLV------FSFATRSGKQMLKA---KQKHKKPSWF---------------LQKAYQIS 329
Query: 379 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 437
EKLV+ K++ ++G + GG +L I F++AIGV V++GYG+TE+ ++
Sbjct: 330 EKLVFSKLKQSLGGRIRFMPCGGANLEPSIGRFFQAIGVNVKLGYGMTETLATVSCWDDI 389
Query: 438 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 497
L SVG + T++KI E NE+L V+G VM+GY+KNP T++A +D
Sbjct: 390 DFNLKSVGRLMPDTQMKI--GEDNEIL---------VKGGMVMKGYYKNPEETQKAFTQD 438
Query: 498 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 557
G+L TGD G + +++ + + R K+ + S G+ + P +E + ++I
Sbjct: 439 GFLKTGDAGNLDKYNN----------VFITDRIKELMKTSNGKYIAPQHIEGKVGKDNVI 488
Query: 558 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 614
QI VI ++ A+IVP+ E + L+I + + ++L K + I + L+K+
Sbjct: 489 DQIAVIADGRKFVSALIVPNFEVLQQMMADLNIKYKNTTDLIKNSQVIDFINKRLQKF 546
>gi|405373569|ref|ZP_11028309.1| Long-chain-fatty-acid--CoA ligase [Chondromyces apiculatus DSM 436]
gi|397087523|gb|EJJ18562.1| Long-chain-fatty-acid--CoA ligase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 622
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 260/546 (47%), Gaps = 75/546 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+++ R++ ++ +++ + L GVKP +++++F++ S +WL+ D + A AI
Sbjct: 40 KKDGRWQDVTFAQFLEDVKAMSAALVAQGVKPGDRVAIFANTSLQWLICDLAIGAAQAIT 99
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVEN-------PEFFNRIAETLCSKAAMRFIILLWG 155
V + ++ +E +I NHSE+ + ++N P RI + L ++ ++L G
Sbjct: 100 VPIYASNTPDECRYILNHSETSLVFIDNDEKDVRQPGRLTRIRQKLAECPSVAKLVLFEG 159
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
+ + + + GR A D DAR + DD A +YTSG
Sbjct: 160 PAAGGNE--------LALSDFVAQGRTEHAARPDDFDAR----VNAVSMDDTAALIYTSG 207
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG+PKGV+LTH+N + ++ + GD + LP HV+ + S G L+
Sbjct: 208 TTGDPKGVILTHRNWAFEAKAAQSVGMMAPGDSVMLFLPLAHVFAQVVKASWLSMGYRLI 267
Query: 276 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+V L +L +P + SVP V+E +Y+ + + S+A + R L R +F
Sbjct: 268 IAESVEKLLANLVETRPTVLPSVPRVFEKVYNNV---VANGSSAPGLKGR-LFRWAF--- 320
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
++++ + R+Q + + LA+KLV+ K+++AI
Sbjct: 321 ---KLFDEYVEARSQGREYSSLGFA-----------------LAKKLVFAKVRAAISEKL 360
Query: 395 AG-----VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G +SGG L I F++ +G+KV GYGLTE+S R +G+VG P+
Sbjct: 361 GGNMRLFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETSAGSTVNREHKIKIGTVGAPMP 420
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
+++I S G + +RG VM+GY+KNP AT +A+D DGW +TGDIG +
Sbjct: 421 GLDVQI-----------ASDGEILIRGPSVMKGYYKNPEATAEAIDADGWFHTGDIGELD 469
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
+ L + R KD IV + G+NV P LE + +I Q VV G +R
Sbjct: 470 SDN----------YLRITDRKKDIIVTAGGKNVAPQNLENSLKTHPIISQAVVTG--DKR 517
Query: 570 PGAIIV 575
P +++
Sbjct: 518 PYLVVL 523
>gi|330469354|ref|YP_004407097.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
gi|328812325|gb|AEB46497.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
Length = 618
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 249/546 (45%), Gaps = 76/546 (13%)
Query: 39 IRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT 98
IR + V C + E++ A GL GV+P ++++L S W + D + A
Sbjct: 55 IRRDSQGGLVDVTCR-QFRDEVVAVARGLVAAGVRPGDRVALMSRTRYEWTLVDYAIWAA 113
Query: 99 GAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS 158
GA+ V SS+E+ I S +VA VE+ +A + + + LW
Sbjct: 114 GAVTVPVYETSSAEQAAWILADSGAVAAVVESTAHATLVAGV---RDRLPELAHLW---- 166
Query: 159 SVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
+I + DE++ G A + A + S DIAT +YTSGTTG
Sbjct: 167 --------QIDLGGIDELMTTGNTVEPAEIEQRRA-------GLRSVDIATIIYTSGTTG 211
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIF-SRGIEL 274
PKG +LTH+N+ I + ++P N L LP H + R + +R
Sbjct: 212 RPKGCVLTHRNMYSDIANAVPVLPNLFGPNASTLL-FLPLAHAFARLIQIGVVQARATMA 270
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+ V+NL +LQ +P +++SVP V+E +Y+G KQ ++ ++ ARA ++ AY+
Sbjct: 271 HCSDVKNLVPELQEIKPTFVLSVPRVFEKVYNG-AKQKAEAAGKGKIFARAEA-VAIAYS 328
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-IS 393
G L + H L +KLVY K+++A+G
Sbjct: 329 EALETSAGPGLALRVQ------------------------HALFDKLVYGKLRAALGGRC 364
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
+ +SGG L + F+ +GV V GYGLTE+SP +A P +G+VG P+ I
Sbjct: 365 RDAISGGAPLGARLGHFFRGVGVPVCEGYGLTETSPAASANLPGFTRIGTVGRPLPGVTI 424
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
+I D G V + G V QGY++N AT +A+ DGW TGD+G
Sbjct: 425 RIAD-----------DGEVLIAGDIVFQGYWRNDEATAEAISSDGWFRTGDLG------- 466
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
S G L + GR K+ IV ++G+NV P LE+ LI Q VV+G Q A+
Sbjct: 467 ---SLDGDGYLTITGRKKEIIVTASGKNVAPAVLEDQVRAHQLISQCVVVGDRQPFIAAL 523
Query: 574 IVPDKE 579
I D+E
Sbjct: 524 ITLDEE 529
>gi|429747308|ref|ZP_19280584.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429163446|gb|EKY05672.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 599
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 275/548 (50%), Gaps = 60/548 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++P+E + + + N+ +W +AD L AI V + +++E+ L++ NH+E L V +
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEGKVLFVGD 116
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+ +++ E ++ I++ + P + E+ +++ + LG S
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVC----DNEVP-LTEKQYSIHWNDFLALGN------SPQ 165
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKF 249
D + DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D
Sbjct: 166 YDTELDKRIAERNLDDLFTIIYTSGTTGEPKGVMLTYQNLAFQMVGHTERLSTVDNTDTS 225
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGI 308
L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE +++ +
Sbjct: 226 LAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATV 285
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
+ SS V R L R++ A KR+ L K+PS+
Sbjct: 286 HDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------------- 322
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++GYG+TE+
Sbjct: 323 -VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTET 381
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
+ I+ SVG+ + + +++I E NE+L V+G VM+GY+KNP
Sbjct: 382 TATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNP 430
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T +A DG+L TGD G + +++ L + R K+ + S G+ + P +
Sbjct: 431 EETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMI 480
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 606
E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K + I
Sbjct: 481 EGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEY 540
Query: 607 LYGELRKW 614
+ +L+K+
Sbjct: 541 IGKQLQKF 548
>gi|256820350|ref|YP_003141629.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256581933|gb|ACU93068.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 599
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 276/548 (50%), Gaps = 60/548 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++P+E + + + N+ +W +AD L AI V + +++E+ L++ NH+E L V +
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+ +++ E ++ I++ + P + E+ +++ + LG S
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVC----DNEVP-LTEKQYSIHWNDFLALGN------SPQ 165
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKF 249
D + DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D
Sbjct: 166 YDTELDKRIAERNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTS 225
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGI 308
L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE +++ +
Sbjct: 226 LAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATV 285
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
+ SS V R L R++ A KR+ L K+PS+
Sbjct: 286 HDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------------- 322
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++GYG+TE+
Sbjct: 323 -VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTET 381
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
+ I+ SVG+ + + +++I E NE+L V+G VM+GY+KNP
Sbjct: 382 TATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNP 430
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T +A DG+L TGD G + +++ L + R K+ + S G+ + P +
Sbjct: 431 EETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMI 480
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 606
E + +LI QI VI ++ A+IVP+ E + A K L++ + + +++ K + I
Sbjct: 481 EGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKHSQVIEY 540
Query: 607 LYGELRKW 614
+ +L+K+
Sbjct: 541 IGKQLQKF 548
>gi|384172735|ref|YP_005554112.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
gi|345472345|dbj|BAK73795.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
Length = 580
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 277/586 (47%), Gaps = 82/586 (13%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
N ++ + + +++ + L+ +G++ + + +F+ +S WL+ D + GAI+V
Sbjct: 30 NGTYKNISTTTFKNKVICLSLALKDMGIQKGDTVGIFASSSPFWLIFDFAIHEVGAISVP 89
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
+ S+E L + N S + +++ E I E + + FI +
Sbjct: 90 IFANISTENLNYEINDSAMKYMFIDSLERLKDIEE---KNSHLTFITHNF---------C 137
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
++E ++YDEI+ +G++ DS H E D+I + +YTSG TG PKGVM
Sbjct: 138 IKEPNFYNYDEILVIGQQ----ICDSKGFIPHKAEE----DEIFSIIYTSGNTGTPKGVM 189
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLK 283
LTHKN++ Q+R + ++ + LS+LP H++ER + SRGI + + + N+
Sbjct: 190 LTHKNIVSQLRDINKLIDLPKEEVALSLLPLAHIFERTVMSYYLSRGISIYFVDDILNVA 249
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
+ ++ +P M VP + E +++ I+ QI +++A ++F+Y
Sbjct: 250 NLMKIVKPTIMTVVPRLLEKIFNKIKTQILEKPFFSKIIA----SLAFSY---------- 295
Query: 344 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 402
L N + S+L + D KLVY K + G + VSGG
Sbjct: 296 ALKENLDKSSFLFKIYD-------------------KLVYSKFREIFGSRVQKLVSGGAP 336
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
L I F+ IGV V GYGLTE SPVI+ P+ N +GS G I +IKI A+ E
Sbjct: 337 LSKEIAQFFVNIGVPVYQGYGLTEFSPVISTNYPSANKVGSCGKVIPSAKIKI--AQNKE 394
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
+L V G +M+GY T + +D+DGWL+TGDI ++ G
Sbjct: 395 LL---------VSGPSLMKGYLNQEELTAKTIDKDGWLHTGDIAYLDEE----------G 435
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
L + R K+ STGE V + +E+ + I VVI ++++ A++ DKE+
Sbjct: 436 YLFITSRLKEIFKTSTGEYVNAVAIEQKLSKDRYIEFAVVISENKKFTTALLFIDKEKYQ 495
Query: 583 MAAK---RLSI-VHADASEL--SKEKTISLLYGELRKWTSKCSFQI 622
+A K L+I + E+ + K IS + +L +W F+I
Sbjct: 496 LAKKINNNLTIEEYYKQPEILDNISKHISNINKDLNQWEKIVDFRI 541
>gi|332528557|ref|ZP_08404545.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
gi|332042068|gb|EGI78406.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
Length = 638
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 285/600 (47%), Gaps = 44/600 (7%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
++R ++ E+ + L G++ +++++ N + DQ LA GA+ V
Sbjct: 44 TQQWRSLSWAQTLTEVRSWQGALASCGIQSGQRVAILLANGFHAMRIDQATLAQGAVPVP 103
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKA----AMRFIILLWGKKSSV 160
+ + + +I + E+ L + + +I ++R ++ +
Sbjct: 104 LHAIDNPGSIAYILSDCEASLLMLGQAAQWEQIQAAAVQAGIPLTSLRTVVFSEASAQEL 163
Query: 161 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
+ + ++ L D++ + GSDD+A VYTSGTTG P
Sbjct: 164 GAQAATMVTSPAQPRLLTLRDWLNAGKKDASHGTESMSRTAPGSDDLAAIVYTSGTTGKP 223
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-A 278
KGVMLTH+N+L +++LY V D FLS LP H +ER GY++ + G ++Y +
Sbjct: 224 KGVMLTHRNVLANVKALYPFVTPLPDDVFLSFLPLSHTFERTTGYYLPIASGSAVVYARS 283
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
V+ L +D++R +P +ISVP +YE +++ +Q+ + S+ +R+ A + ++R
Sbjct: 284 VQQLAEDMKRVRPTVLISVPRIYERVHARLQEVLAKSAFKQRLFEAAQAK------GWQR 337
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 397
L + + A WL R++ P LL +LV + + + G + V
Sbjct: 338 FRAAHGLKAAPGEDAAQAAKAGWL--RVL-----PWALL-RRLVAQPLMAQFGGRIRIAV 389
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGG L + +G+ + GYG+TE+SPV+AA RP N +VG + +++I
Sbjct: 390 SGGAPLAQAQARCFLGLGLPLLQGYGMTETSPVVAANRPDDNDPATVGRALPGVQVRI-- 447
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G+ ++VRG+ VM+GY+ P T + LD +GWL+TGD I ++GR
Sbjct: 448 ---------GANRELQVRGASVMRGYWNRPEDTARVLDAEGWLSTGDQAEI---DAQGRI 495
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
R + GR K+ IV STGE V P +LE+A L + L Q+ V+G+ + A+ V
Sbjct: 496 R-------ILGRIKEIIVTSTGEKVPPGDLEQAILDAPLFEQVFVVGEQRPFIAAVAVVQ 548
Query: 578 KEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 635
+E + AKRL + D L+ I+ ++ + T + P + + EP+ +
Sbjct: 549 ADEWIKLAKRLGVDPRDDGSLAHPDVIAAALKQMERVTGSFARYAVPRAVTLTREPWNIE 608
>gi|371775800|ref|ZP_09482122.1| long chain fatty-acid CoA ligase [Anaerophaga sp. HS1]
Length = 606
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 168/605 (27%), Positives = 275/605 (45%), Gaps = 89/605 (14%)
Query: 30 NCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWL 89
N D +AT+ R+ + F + +FA GL +G K +K++ S+N W
Sbjct: 18 NKSDILATK-----RDGNWIKFSADDYSRNAKNFAYGLLALGFKKGDKIATISNNRPEWN 72
Query: 90 VADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRF 149
D GM G ++V ++ HI +HS++ L V + + R+ + + K +
Sbjct: 73 FVDMGMAMAGVVHVPVYPTLGEDDFKHILSHSDAKMLIVADLGTYRRL-QPIARKISK-- 129
Query: 150 IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYK------YETIG 203
++++ F+Y E I E K + DA+ YK E+I
Sbjct: 130 ---------------LKKVYTFNYYEGIPHWSEISK---EGEDAKMKYKEKLQKISESIK 171
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
DD+ T +YTSGTTG PKGVML+H+N+L + ++++ P D+ LS LP HVYER
Sbjct: 172 PDDLLTIIYTSGTTGLPKGVMLSHRNILSNVEGVFNLYPLGPDDRILSFLPLCHVYERMV 231
Query: 264 GYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 322
Y +G + Y + + +L + ++VP V E +Y +I + R +
Sbjct: 232 NYLFQWKGCGIYYAENLGTIAQNLAEVRASAFVTVPRVMERIYD----RIVSKGEDLRGI 287
Query: 323 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 382
R + ++ R+ N K W R LW +A KLV
Sbjct: 288 KRRIFFMALKIGERYRV--------NGKHGP-------WYGLR-----LW----IARKLV 323
Query: 383 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR---RPTC 438
+ K Q G K +SGG +L + + A G+ + GYG+TE+SPVIAA P
Sbjct: 324 FAKWQQTFGGKLKFVISGGAALQPRLSRLFFAAGIPLMEGYGMTETSPVIAANHLSEPNS 383
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
++G+VG + + ++KI D G + V+G VM GY+K+ T + LD+DG
Sbjct: 384 LLIGTVGPVLKNIQVKIDD-----------DGEILVKGPSVMMGYYKDKKNTAEVLDKDG 432
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
WL+TGDIG + G L + R K+ S+G+ + P +E S I
Sbjct: 433 WLHTGDIG----------TFEKGKFLKITDRKKEMFKTSSGKYIAPQAIENILKESFFIE 482
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 618
Q +V+G++++ A+I P+ E + + A I D EL + + ++ +K K
Sbjct: 483 QAMVVGENEKFASALISPNFEYLHVWANDRHIHFRDNQELIRHPDVLKVF---QKEVEKY 539
Query: 619 SFQIG 623
+ Q+G
Sbjct: 540 NKQLG 544
>gi|441505110|ref|ZP_20987100.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441427211|gb|ELR64683.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 607
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 269/582 (46%), Gaps = 60/582 (10%)
Query: 29 RNCVDAVATRIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCR 87
RN + + R+ + + N +++ ++ ++I A + G+ ++K+ +FS+N R
Sbjct: 13 RNQIARLGDRVALRHQVNGQWQDISWAEFGEQIQQLALAMLAQGLNVQDKIGIFSNNMPR 72
Query: 88 WLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
W VAD L + V S+ ++ +I N+++ L V + E +
Sbjct: 73 WTVADFAALYNRCVTVPIYPTSTPQQAAYIINNADIRILFVGEQAQHDAALEIAAECPQL 132
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
I+++ S ++ E V SYD+ + G S A + DD+
Sbjct: 133 ERIVVM-----SQQVELAEHPLVCSYDDFVQQG-------SGDAQAELEQRLSQTAMDDL 180
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
T +YTSGTTG PKGVML + N+ QI + + + GD L LP HV+ERA ++
Sbjct: 181 FTLIYTSGTTGTPKGVMLDYGNVAGQIEGHDEKLALDEGDVSLCFLPLSHVFERAWTFYA 240
Query: 268 FSR-GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
R G+ + L++ L +P+ M +VP VYE +YS + +++ + R+V+
Sbjct: 241 LHRGGVNCYLSDTNKLREALVEVKPNVMAAVPRVYEKIYSAVHEKVSRAPFHRKVM---- 296
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
++A R+ C + Q++PS L L + LA+KLV K+
Sbjct: 297 --FTWAVNMGARM--ALC-HQEQRKPSLL---------------LKKSYKLADKLVLSKL 336
Query: 387 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
+ +G K GG L I F+ AIG+ V++GYG+TE++ I+ C S+G
Sbjct: 337 RKILGGQIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATISCWDDECFNPDSIG 396
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
P+ E+KI E NE+L VRG VM+GY+K P + + EDG+L TGD
Sbjct: 397 LPMPGAEVKI--GENNEIL---------VRGPMVMRGYYKMPEESAKNFTEDGFLKTGDA 445
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G G L + R K+ + S G+ + P +E A + I QI VI
Sbjct: 446 GHFDDK----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIAD 495
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 607
++ A+IVP E + A+ L+I + D EL K I L
Sbjct: 496 TRKFVSALIVPCFEALEEHARELNIKYHDRLELVKHSQIREL 537
>gi|429757066|ref|ZP_19289623.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429169713|gb|EKY11454.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 599
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 275/548 (50%), Gaps = 60/548 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++P+E + + + N+ +W +AD L AI V + +++E+ L++ NH+E L V +
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+ +++ E ++ I++ + P + E+ +++ + LG S
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVC----DNEVP-LTEKQYSIHWNDFLVLGN------SPQ 165
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKF 249
D + DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D
Sbjct: 166 YDTELDKRIAERNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTS 225
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGI 308
L+ LP HV+ERA YF + I + Y NL ++ L +P M +VP YE +++ +
Sbjct: 226 LAFLPLSHVFERAWTYFCLYKAITVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATV 285
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
+ SS V R L R++ A KR+ L K+PS+
Sbjct: 286 HDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------------- 322
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++GYG+TE+
Sbjct: 323 -VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTET 381
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
+ I+ SVG+ + + +++I E NE+L V+G VM+GY+KNP
Sbjct: 382 TATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNP 430
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T +A DG+L TGD G + +++ L + R K+ + S G+ + P +
Sbjct: 431 EETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMI 480
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 606
E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K + I
Sbjct: 481 EGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEY 540
Query: 607 LYGELRKW 614
+ +L+K+
Sbjct: 541 IGKQLQKF 548
>gi|193212756|ref|YP_001998709.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
gi|193086233|gb|ACF11509.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
Length = 609
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 162/588 (27%), Positives = 276/588 (46%), Gaps = 78/588 (13%)
Query: 41 ISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
I+R+ N + L ++ A L+ G++ +++++ S+N W +AD +L+ G
Sbjct: 31 IARKINGAYVPISYDSLAEDCRQLAAFLKEKGIESGDRVAILSENRPSWYLADMAILSLG 90
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
AI+V ++ +I N+ + + V N +L GK S
Sbjct: 91 AIDVPLYPSLPPNQIEYILNNCGAKGIIVSN--------------------MLQLGKILS 130
Query: 160 VAP---DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYE----TIGSDDIATYVY 212
+ P D+ I + DE I+ E +A S+ + ++ G DD+AT +Y
Sbjct: 131 IWPKLNDLNLVIVMNKLDEPIEDVIELSQAKSEGKKILEAAPWQLDGIKTGPDDVATIIY 190
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRG 271
TSGTTG PKGVMLTH+NL ++S ++ + D LS LP H YER GY++ F+ G
Sbjct: 191 TSGTTGLPKGVMLTHRNLCENVKSCSTVIRLDETDSSLSFLPLSHAYERTGGYYLMFACG 250
Query: 272 IEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
+ + ++ + ++ +P + +VP +++ + + + K + + + +
Sbjct: 251 ARIYLAESIETISLNIMEAKPTIIFTVPRLFDRMKANMLKAVAKEGGLKEKIFYWAVSTG 310
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
Y NQ L + I+ H LA+KLVY K++
Sbjct: 311 EKY-------------HNQ------------LAEGKVSPIVNVQHKLADKLVYHKLREKF 345
Query: 391 GIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G + VSGG +LP F+++IG+ + G+GLTE+SPV RP G+VG P+
Sbjct: 346 GGRLRYFVSGGAALPQKTGEFFQSIGITILEGFGLTETSPVTNVNRPENVKFGTVGPPVK 405
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
+ E++I A+ E+L ++G +M+GY+K+ AT + + +DGW TGDIG I
Sbjct: 406 NVEVRI--AQDGEIL---------LKGPNIMKGYWKDDEATAEVI-KDGWFYTGDIGEI- 452
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
G L + R K IV S G+N+ PL +E L S + Q +V+G+ +
Sbjct: 453 ---------DADGYLKITDRKKHIIVTSGGKNIAPLPIENLILESPYVDQTMVVGEKRPF 503
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 617
A+IVPD +++ A I EL + K + +Y +L + S+
Sbjct: 504 LIALIVPDFQKLSEFASEHQITAGSNKELIEAKEVIKVYEQLLRTVSR 551
>gi|282896868|ref|ZP_06304874.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
gi|281198277|gb|EFA73167.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
Length = 289
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 391 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEIIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
T++KIV ET + LPAG G+V ++G QVM GY++N ATKQ +D GW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPAGKIGLVLLKGPQVMGGYYQNLEATKQVIDNHGWFNSGDLGWVTP 126
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 571 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 616
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 617 -----KCSFQIGPIHVVDEPFTV 634
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRADDRIGPFKLILEPFSM 259
>gi|384261959|ref|YP_005417145.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
gi|378403059|emb|CCG08175.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
Length = 607
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 172/593 (29%), Positives = 274/593 (46%), Gaps = 73/593 (12%)
Query: 42 SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
S+R +R + + + ++ A L G+KP +++ L S+N W +AD +LA G I
Sbjct: 36 SKRGGVYRPWSWASVHDQVAALANALIDHGLKPGDRVVLASENRPDWTIADLAILAAGGI 95
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
+ ++ + LHI ++ E+ A+A+ + R ++L+
Sbjct: 96 PTPAYATNTEADHLHILDNVEA-AMAIVSTPLARRFLPAAARARRTPLVVLMDPADDVPR 154
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
P +PV S++ ++ G E R+ S ++ R ++D+A ++TSGT G PK
Sbjct: 155 P---AHVPVESWNALLAQG-EGREVPSTAHRIR---------ANDLAVIIHTSGTGGAPK 201
Query: 222 GVMLTHKNLLHQIRSLYDIVP--AENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT- 277
GVML+H+ +LH +D++ + + FLS LP H YE G +F G E+ +
Sbjct: 202 GVMLSHRAILHNCMGAHDLLATIGLSHEIFLSFLPLSHSYEHTTGLFFPICLGAEVYFAE 261
Query: 278 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
V L ++ +P M +VP +YE + + + +QI + K
Sbjct: 262 GVETLSANMLEARPTIMTAVPRLYEMMRARLLRQIEKEDGFKS----------------K 305
Query: 338 RIYEGFCL-TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 395
Y+ L +R + P+ L W RI L + LV +K+ G KA
Sbjct: 306 LFYQAVELGSRRLQDPAGL----SWR-ERITDGAL-------DYLVRRKVSQRFGGRLKA 353
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
VSGGG L + LF+ A+GV V GYGLTE++PV++ P +GSVG + E++I
Sbjct: 354 MVSGGGPLSPEVGLFFRALGVPVLQGYGLTEAAPVVSCNLPCRVKIGSVGPALKDVEVRI 413
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
G G + VRG VM GY+ +P AT ALD +GWL+TGD+G I
Sbjct: 414 -----------GLDGELLVRGPLVMDGYWNDPDATAHALDGEGWLHTGDVGEI------- 455
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G + + R KD IV S G+N+ P +E I Q+VV G A+IV
Sbjct: 456 ---DADGDIRITDRKKDIIVNSGGDNISPQRVEGILSLEPEIGQVVVFGDRMPHLVALIV 512
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVV 628
PD+E +L R S + +LS +L L + + + ++ PI V
Sbjct: 513 PDREFLL----RWSRETGRSDDLSLAANDPVLRLALARAVDRANARLSPIERV 561
>gi|448307028|ref|ZP_21496929.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
gi|445596575|gb|ELY50660.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
Length = 648
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 257/554 (46%), Gaps = 76/554 (13%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
FR ++ + + + G +G++ +++ +F++ W D +L GA+
Sbjct: 60 EFRAISYLEMRDIVRNLSAGFHDLGIELGDRVGIFANTRMEWAQCDFALLGAGAVVTTVY 119
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRI--AETLCSKAAMRFIILLWGKKSSVAPDI 164
SS ++ ++ + ++ A+ VEN + AE + I L G
Sbjct: 120 ESSSPSQVAYLLDDPDATAVVVENESLLETVLEAEDDLDLECIVSIDELSGYD------- 172
Query: 165 VEEIPVFSYDEIIDLGRE--SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
+ +++ D++ D G +A+ + DA G DD+A+ +YTSGTTG PKG
Sbjct: 173 -DRDDIYTLDDVYDRGEAVFDLEAYQERVDAP--------GLDDLASLIYTSGTTGQPKG 223
Query: 223 VMLTHKNLLHQIRSLYDI----------VPAENGDKF-LSMLPPWHVYERACGYFI-FSR 270
V LTH N + ++ +P+ + + +S LP HV+ER G+F+ F+
Sbjct: 224 VQLTHWNFRSNVNAVRKRFAPRPDKPAGIPSLDEESLAVSYLPLAHVFERTAGHFVLFAS 283
Query: 271 GIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 329
G + Y + L++D QP SVP VYE +Y I++Q S +R+ A
Sbjct: 284 GSCVAYAESPDTLQEDFGTVQPTMATSVPRVYEKIYDAIREQASESGVKKRIFEWATD-- 341
Query: 330 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 389
+++ A IL +A+ LV+ ++ A
Sbjct: 342 ---------------------------VGVEYQQADSPGPILSAKQSIADTLVFSTVREA 374
Query: 390 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 448
+G + +SGGGSL + Y A+G+ + GYGLTE+SPV++ P +G++G+P+
Sbjct: 375 LGGEIELLISGGGSLSADLCQLYHAMGLPIYEGYGLTETSPVVSTNPPEAVKIGTIGYPL 434
Query: 449 NHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
++KI ++ ++ G G + V+G V QGY+ P AT A +DGW TGDI
Sbjct: 435 PGVDVKIDESAADQAAFTDDPGDVGELLVKGPNVTQGYWNKPGATTGAFTDDGWFRTGDI 494
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
+R G L RAK +VLSTG+NV P +E+A S +I Q +V+G
Sbjct: 495 ----------IHQRPDGFLEFRERAKQIMVLSTGKNVAPAPIEDAFAASEIIEQCMVVGD 544
Query: 566 DQRRPGAIIVPDKE 579
++ GA++VP+ +
Sbjct: 545 GEKFIGALLVPNSD 558
>gi|303257837|ref|ZP_07343847.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|330998741|ref|ZP_08322469.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|302859440|gb|EFL82521.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|329576238|gb|EGG57754.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 610
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 258/563 (45%), Gaps = 60/563 (10%)
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
NS D +L+ G + V + + I N+SE+ L V +N +
Sbjct: 75 NSITATACDLSILSQGMVPVPLHAVDTPSSSAFILNNSEAKILFVPRTLRWNAMLNAQKE 134
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++ ++ + D +PV + + + G + K +I
Sbjct: 135 YPYLKLVVTTGNDAEGASED--SPVPVVNLSDWLKQGENT------------DLKEVSID 180
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
DD+A VYTSGTTG PKGVMLTH N+L ++S ++ + D FLS LP H +ER
Sbjct: 181 PDDLAAIVYTSGTTGKPKGVMLTHDNVLSNVKSFSQVIDVGSDDVFLSFLPFSHTFERTV 240
Query: 264 G-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 321
YF G E+ + +V L +DL+ +P ++VP V+E +S I+ + + +
Sbjct: 241 TFYFTLFLGAEVGFARSVLKLAEDLKIIRPTIFVAVPRVFEQFHSRIKASLQSKGS---- 296
Query: 322 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 381
I + A A + FC PS + +D + +WP +L ++
Sbjct: 297 -----IAATLADQAEMIGWRRFCRRNGLAVPSSSASWLD--------SFIWP--MLESRI 341
Query: 382 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
V G + ++GG +L I FY A+GV+++ GYGLTE+SPVI+ R CN
Sbjct: 342 VLPIRDVFGGRLRIAIAGGAALNNAIGRFYNAMGVELRQGYGLTETSPVISVNRENCNNP 401
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
+VG PI +I++ D E ++V+G VM+GY+K P AT + EDGW
Sbjct: 402 VTVGQPIPGLQIRLGDIEE-----------LQVKGPTVMKGYWKRPDATAEVFTEDGWFR 450
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD A GR R ++GR K+ IV STGE + P ++E A L Q++
Sbjct: 451 TGD---QADLSDAGRIR-------IKGRIKEIIVTSTGEKIPPTDMELAIQTDPLFEQVM 500
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 621
V+G+ + A+ V ++ E AK ++ +D L + L+K S+ Q
Sbjct: 501 VVGEARPFITALAVVNEAEWEKFAKEFNVDPSDDRMLMRRDIRMAALKRLKKAASRFP-Q 559
Query: 622 IG---PIHVVDEPFTVNFLCLAL 641
G I ++ E +TV+ CL +
Sbjct: 560 YGIPRNIRLLKEHWTVDNGCLTV 582
>gi|336322685|ref|YP_004602652.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336106266|gb|AEI14084.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 619
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 274/584 (46%), Gaps = 69/584 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S + +L A GL +G+ EK+++ S+N W++AD G+L+ GAI V + +++++
Sbjct: 40 SHFYERVLMCARGLLKLGIGKGEKVAILSENRAGWVIADLGILSVGAITVPVYATNTADQ 99
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
++ NHS + + V N ++++ L + + + + + + I+ +F
Sbjct: 100 TAYVINHSGAKIVFVSNKIQYDKL---LSVREKIPHVETVISFERFLGDKILPVYTLFQL 156
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
EI E K +S + + DDI T +YTSGTTG PKGVMLTH+N+++
Sbjct: 157 SEISMPITEKEKTEIESG-------IDEVDKDDILTIIYTSGTTGVPKGVMLTHENIVYD 209
Query: 234 IR-SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
+ + + N + LS LP H ER GY+I G EL + ++ + +++ +
Sbjct: 210 AQYGIEKVKSLTNEETLLSFLPLSHALERTVGYYITLMNGCELAFAESIEKVPENMTEIR 269
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
P MISVP ++E +YS I I S + ++V RAL + Y K I + +
Sbjct: 270 PTVMISVPRLFEKIYSRIFDNIHQMSVIKSKLVHRAL-DVGKEYVRRKYITKDLPESLKV 328
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHID 408
K Y +KLV++KI+ G K VSGG L I+
Sbjct: 329 KYRFY------------------------DKLVFRKIRQRFGGRMKFFVSGGAPLDKTIN 364
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+ IG+ + GYGLTE+SP I+ GSVG +TE K+ A+ E++
Sbjct: 365 EFFWVIGIPILEGYGLTETSPAISINTLDDVKFGSVGTAFEYTEFKV--AQDGELM---- 418
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
V+ VM+GYF++ TK+ E+GWL TGD+ I G + ++
Sbjct: 419 -----VKSPAVMKGYFRDDEKTKEMFTEEGWLKTGDVAEIDED----------GFIFIKD 463
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R K+ IV + G+N+ P +E I Q+ V G ++ A+IVP+ E + A+
Sbjct: 464 RKKEIIVTAGGKNIAPQPIENEMKLDKYISQVYVHGDNKPYLTALIVPNFERLFEFAREN 523
Query: 589 SIVHADASELSKEKTISLLY--------GELRKWTSKCSFQIGP 624
+ D +L K + ++ L+ L K+ + F I P
Sbjct: 524 KLKFFDVGDLVKNEKVTELFRSRIEEINSNLPKYETIKKFSIVP 567
>gi|213963544|ref|ZP_03391797.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
gi|213953824|gb|EEB65153.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
Length = 599
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 159/556 (28%), Positives = 279/556 (50%), Gaps = 60/556 (10%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
++ L +GV+P+E + + S N+ +W +AD L AI V + +++E+ L++ NH+E
Sbjct: 49 LSKALLSLGVQPQETVGILSQNTPQWSLADLACLQIRAITVPIYTTNTAEQALYVMNHAE 108
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V + + + ++ + +++ II+ + VA + E+ +++ + LG
Sbjct: 109 VKVLFVGDEKQYQKVLQVANQCPSLQMIIVC---DNEVA--LTEKQYSIHWNDFLALGSS 163
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ-IRSLYDIV 241
S+ D + + DD+ T +YTSGTTG PKGVML+++NL Q I +
Sbjct: 164 SQY------DVEFEKRLKERNLDDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLS 217
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLV 300
+N D L+ LP HV+ERA +F + + + Y NL ++ L + +P M +VP
Sbjct: 218 TVDNTDISLAFLPLSHVFERAWTFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRF 277
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE +++ + + SS V R L R++ A +R+ L K+PS
Sbjct: 278 YEKIFATVHDKADASS----FVKRKLFRLAIA--TGRRV---LNLREQGKKPSL------ 322
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L + L +KLVYKK++ A+G K GG +L I F+++IG+ ++
Sbjct: 323 ---------ALQKAYNLFDKLVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLK 373
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
+GYG+TE+ I+ SVG + + +++I E NE+L V+G V
Sbjct: 374 LGYGMTETVATISCWGDNRINPQSVGEVMPNVQVRI--GEDNEIL---------VKGGMV 422
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GY+KNP T + DG+L TGD G + ++S L + R K+ + S G
Sbjct: 423 MKGYYKNPEETAKVFTPDGYLRTGDAGKLDGNNS----------LFITERIKELMKTSNG 472
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P +E + +LI QI V+ ++ A+IVP+ E + A K L+I + + ++L
Sbjct: 473 KYIAPQMIEGKVGKYNLIEQIAVVADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLI 532
Query: 600 KE-KTISLLYGELRKW 614
K + I + +L+K+
Sbjct: 533 KHSQVIEYIGKQLQKF 548
>gi|108757205|ref|YP_631168.1| long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK 1622]
gi|108461085|gb|ABF86270.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK
1622]
Length = 620
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 264/559 (47%), Gaps = 77/559 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+++ R++ ++ E+ + GL GVKP +++++F++ S +WL+ D + A AI
Sbjct: 38 KKDGRWQDVTFAQFLDEVKALSAGLVAQGVKPGDRVAIFANTSLQWLICDVAISAAQAIT 97
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPE-------FFNRIAETLCSKAAMRFIILLWG 155
V + ++ +E +I NHSE+ + V+N E R+ + L A+R I+ G
Sbjct: 98 VPIYASNTPDECRYILNHSETTLVFVDNDEKDARQAGRLTRLRQKLAECPALRRIVAFEG 157
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
+ S ++I GR A D +AR + +D A+ +YTSG
Sbjct: 158 PVAGGTE--------LSLADVIAQGRTEHAARPDDFEAR----VAGVSMEDTASIIYTSG 205
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG+PKGV+LTH+N + ++ + D + LP HV+ + S G L+
Sbjct: 206 TTGDPKGVILTHRNWAFEAKAAQSVGMMVPSDSVMLFLPLAHVFAQVVKAAWLSMGYRLV 265
Query: 276 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+V L +L +P + SVP V+E +Y+ + + SAA + R L R +F
Sbjct: 266 VAESVDKLLANLVETRPSVLPSVPRVFEKVYNNV---VANGSAAPGLKGR-LFRWAF--- 318
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
++++ + R+Q + + LA+KLV+ K+ +AI
Sbjct: 319 ---KLFDEYVEARSQGREYATLGFA-----------------LAKKLVFSKVHAAISEKL 358
Query: 395 AG-----VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G +SGG L I F++ +G+KV GYGLTE+ R +GSVG P+
Sbjct: 359 GGNMRVFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETCAGTTVNREHKIKIGSVGAPVP 418
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
E+ I S G + +RG VM+GY+KNP AT +A+D + W +TGDIG +
Sbjct: 419 GMEVMI-----------ASDGEILIRGPAVMKGYYKNPEATAEAIDAENWFHTGDIGELD 467
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
+ L + R KD IV + G+NV P LE A ++I Q +V G D+R
Sbjct: 468 ADN----------YLRITDRKKDLIVTAGGKNVAPQNLENALKTHAIISQAMVYG-DKRP 516
Query: 570 PGAIIVPDKEEVLMAAKRL 588
+++ EE A+RL
Sbjct: 517 YLVVLITVSEE---GARRL 532
>gi|159039049|ref|YP_001538302.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
gi|157917884|gb|ABV99311.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
Length = 599
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 252/548 (45%), Gaps = 80/548 (14%)
Query: 39 IRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT 98
IR R V C + E+ A GL GV+P +++ L S W + D + A
Sbjct: 36 IREGADGARVEVTCH-QFRDEVTAVARGLVAAGVQPGDRVGLMSRTRYEWTLFDYAIWAA 94
Query: 99 GAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS 158
GAI V SS+E+ I + S +VA+ VE +
Sbjct: 95 GAITVPIYETSSAEQAAWILSDSGAVAILVET------------------------SAHA 130
Query: 159 SVAPDIVEEIPVFSYDEIIDLG-RESRKAFSDSNDARK-HYKYETIGSDDIATYVYTSGT 216
++ D+ + +P ++ IDLG + A +S D + + + +DDIAT VYTSGT
Sbjct: 131 TLVADVRDRVPDLAHVWQIDLGAMDELIATGESVDPTEIERRRAAVRADDIATIVYTSGT 190
Query: 217 TGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIEL 274
TG PKG MLTH+++ + + ++P G L LP HV+ R + +
Sbjct: 191 TGRPKGCMLTHRSMYADVANAVPVLPNLFGPGASTLLFLPLAHVFARLIQVGVVQARATM 250
Query: 275 MYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA-LIRISFA 332
+ A ++L LQ +P +++SVP V+E +Y+ KQ + R+ ARA + I+++
Sbjct: 251 AHCADTKDLIARLQAVRPTFVLSVPRVFEKVYNS-AKQKAEADGKGRIFARAEAVAIAYS 309
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-G 391
R G L R Q H L ++LVY+K+++A+ G
Sbjct: 310 EALETRTGPGLAL-RVQ-------------------------HALFDRLVYRKLRAALGG 343
Query: 392 ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ +SGG L + F+ +GV + GYGLTE+SP A RP +GSVG P+
Sbjct: 344 RCRDAISGGAPLGARLGHFFRGVGVTIYEGYGLTETSPAACANRPGAIRIGSVGRPLPGV 403
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
I+I D +E+L + G V GY++N +A+ + L DGW TGD+G +
Sbjct: 404 NIRIDD--DDEIL---------IAGELVFTGYWRNEAASAEVLTPDGWFRTGDLGQL--- 449
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
G L + GR K+ IV + G+NV P LE+ L+ Q VV+G Q
Sbjct: 450 -------DSDGYLNITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLVSQCVVVGDRQPFVA 502
Query: 572 AIIVPDKE 579
A++ D+E
Sbjct: 503 ALVTVDEE 510
>gi|448584787|ref|ZP_21647530.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445727641|gb|ELZ79251.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 666
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 248/534 (46%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS ++ ++ +
Sbjct: 77 LAAGFRDLGIETGDRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQVQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF-SYDEIIDLGR 181
+ A+ VEN E R+ + + +RFI+ +V+E D+++ LG
Sbjct: 137 ANAVVVENEELLERVL-AVEDELDLRFIV------------VVDEYEGHEDRDDVLTLGE 183
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-I 240
R+ ++A + +D+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRRGEEVYDEAAYESWLDEREPEDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRRF 243
Query: 241 VP-AENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRY 289
P + GD LS LP HV+ER G+F+ + + L++D Q
Sbjct: 244 GPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P SVP VYE LY I+ Q S A +R+ A + + AY
Sbjct: 304 RPTTGTSVPRVYEKLYDAIRAQASESPAKKRIFEWA-VGVGQAY-------------HTT 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 350 DAPGYL---------------LTAKHRLADRLVFGQVREALGDNLDFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+ + L
Sbjct: 395 ALYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVETKLDTTVVGDQLGDAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRGS V +GY+ NP T+ A ED W TGD+ + P G
Sbjct: 455 GEVGELLVRGSSVTEGYWNNPEETEAAFVEDDEGERWFRTGDVVELRPD----------G 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YITFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|255531463|ref|YP_003091835.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
gi|255344447|gb|ACU03773.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
Length = 637
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 151/527 (28%), Positives = 257/527 (48%), Gaps = 56/527 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G+ +++ L +NS ++ DQG+ GAINV S +E+ +I N S A+ + N
Sbjct: 60 GIVKGDRMGLMIENSPEYVYYDQGIQQIGAINVSIYPTLSEQEVAYIVNDSGMRAILIGN 119
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII-DLGRESRKAFSD 189
+ +I + + + +I+ + + V+ ++ + +DE++ + G+ ++
Sbjct: 120 TFLYKKILKIAANCRNLEYIVPAFTEYQKVSIPEELKVQIIPFDEVLAETGKLKPARLTE 179
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDK 248
R TI DI++ +YTSGTTG PKGVML+H N + ++ +P + +
Sbjct: 180 IGRIRN-----TILPADISSLIYTSGTTGTPKGVMLSHSNFVENVKVCLQQIPVIDETET 234
Query: 249 FLSMLPPWHVYERACGYFIF-SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 306
FLS LP HV+ER Y + ++G + Y ++ L ++ +P M VP + E ++
Sbjct: 235 FLSFLPLSHVFERTATYHVCCAQGCRIAYAQSLELLAKNMAEIKPTVMSCVPRLLEKIHD 294
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
K + + +A + ++ + +++I E K P
Sbjct: 295 ---KALKSGTAGGGLKSKIFLWALEVGQDYRKIKEA------GKTPG------------- 332
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 425
++ LAEKLV+ KI+ G K +SGG +LP ++ F+ +G+K+ G+GLT
Sbjct: 333 --MVMRAKKTLAEKLVFSKIKEKTGGRLKFMISGGAALPKNVGEFFGNLGIKILEGFGLT 390
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-----------KGIVKV 474
E+SPV+A V G+VG I E+ I D ET +++ + +G + V
Sbjct: 391 ETSPVMAVTEYHRQVYGTVGRIIPGIEVGIQDIETRQMISIQTHDTFMEDFECAEGEIIV 450
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VMQGYF P+ T + +D+D W +TGDIG R G L + R K+ I
Sbjct: 451 RGHCVMQGYFNKPAETAEVIDKDNWFHTGDIG-----------RFYRGNLQITDRLKNMI 499
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
V + G+NV P +E L+S I QI +IG + AI++P+KE +
Sbjct: 500 VNAYGKNVYPTPVENIYLKSLKIDQIFLIGDKREYLTAIVIPNKENL 546
>gi|381159083|ref|ZP_09868316.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
gi|380880441|gb|EIC22532.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
Length = 606
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 166/592 (28%), Positives = 269/592 (45%), Gaps = 80/592 (13%)
Query: 38 RIRISRRNHRFRVFCESKLEQEILDFAE----------GLRVIGVKPEEKLSLFSDNSCR 87
R+R S +R F + L +AE L G+KP ++++L N
Sbjct: 24 RVRRSPEREAYRWFDRANGAWRSLSWAEIAAQAARWRQALAGEGLKPGDRVALLLRNCPE 83
Query: 88 WLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
W++ DQ L+ G + V + +E +I + L V++ + R+AE +
Sbjct: 84 WVMFDQAALSLGLVTVPLYTDDRAENAAYILRDCAARVLLVQDAYRWKRLAEVMTDGRWP 143
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
++LL K + A E V + D + S A H + G +++
Sbjct: 144 ARVVLLDTSKDARALAAKEPAVVVASD------------WLPSEGAIWHQR--AAGPNEL 189
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
A+ VYTSGTTG PKGVMLTH N+L ++ ++ D FLS LP H+ ER Y++
Sbjct: 190 ASIVYTSGTTGKPKGVMLTHGNILSNVQGALTLLDVYQEDVFLSFLPLSHMLERTASYYL 249
Query: 268 -FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV---V 322
G L Y +V L +DL+ +P +I+VP V+E +Y + +QI A R +
Sbjct: 250 PMMAGSTLAYARSVTQLAEDLKNVRPTVIIAVPRVFERVYQRLHEQIRQRPAPTRWLFDL 309
Query: 323 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 382
AR ++F + +R + L LWP + +LV
Sbjct: 310 ARHFGWVAFEHAQGRRRWHPLLL-------------------------LWP---VLRRLV 341
Query: 383 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
K+ +G +A VSGG LP + + +G+ + GYGLTE+SPV++ N
Sbjct: 342 ADKVLERLGGRIRAAVSGGAPLPPEVARLFLGLGLPLIQGYGLTETSPVVSVNPLEDNRP 401
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
+VG P+ +++I +E +E+L V G VM+GY+ N +AT Q L +DGW
Sbjct: 402 ETVGIPLGGVQVRI--SELDELL---------VSGPGVMRGYWNNQAATAQVLGKDGWFR 450
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD ++R G + + GR KD +VLS GE V P ++E A L Q +
Sbjct: 451 TGD-----------QARLVGRHIQITGRLKDILVLSNGEKVPPADMEMAIALDPLFEQAM 499
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 613
V+G+ + A++V + + A+ + D + L+ + I + +RK
Sbjct: 500 VLGEGKPFLSALLVLNADLWPSLARDFQLDPQDPASLNDQGLIKAMLARVRK 551
>gi|448620307|ref|ZP_21667655.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445757095|gb|EMA08451.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 668
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 157/533 (29%), Positives = 250/533 (46%), Gaps = 70/533 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS ++ ++ +
Sbjct: 77 LAAGFRDLGIESADRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQVQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ A+ VEN E R+ + + +RFI++ I E ++++ LG
Sbjct: 137 ANAVVVENEELLERVL-AVEDELDLRFIVV-----------IDEYDGRDDREDVLTLGEL 184
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IV 241
R+ ++A + +D+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 185 YRRGEDVYDEAAYESWLDERDPEDLASLIYTSGTTGRPKGVRLTHWNFRSNVNESYRRFG 244
Query: 242 P-AENGDK--------FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
P + GD LS LP HV+ER G+F+ F+ G + Y + L++D Q +
Sbjct: 245 PRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLAR 304
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 305 PTVGTSVPRVYEKLYDAIRTQASESPAKKRVFEWA-VGVGQAY-------------HTTD 350
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
P YL++ H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 351 APGYLLSA---------------KHRLADRLVFGQVREALGDNIDFFISGGGSLSAELCA 395
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAG 467
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ E ++ + L G
Sbjct: 396 LYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRTVETELDATVVGDRLGDAGG 455
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGV 523
G + VRG V +GY+ +P T+ A ED W TGD+ RR G
Sbjct: 456 EVGELLVRGPSVTEGYWNDPEETEAAFVEDDEGERWFRTGDV----------VERRPDGY 505
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 506 IAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|300784352|ref|YP_003764643.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|384147618|ref|YP_005530434.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|399536237|ref|YP_006548899.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|299793866|gb|ADJ44241.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|340525772|gb|AEK40977.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|398317007|gb|AFO75954.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
Length = 598
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 247/525 (47%), Gaps = 73/525 (13%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
E+L A+G+ G+ +++++ S W + D + A GA+ V SS E++ I
Sbjct: 54 EVLAVAKGMAKAGIGRGDRVAIMSKTRYEWTLIDFAIWAAGAVTVPIYDTSSPEQVHWIL 113
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
+ S + + VE + E + I + G +V +E+
Sbjct: 114 SDSAAKGVFVETNAHAAAVEEIRDRLTDLASIWQIEGGSPAV-------------EELSA 160
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
LG + +D H + + +D++AT VYTSGTTG PKGV LTH+NLL +IR+
Sbjct: 161 LG-------APLSDDELHDRRREVSADELATIVYTSGTTGRPKGVELTHRNLLAEIRADI 213
Query: 239 DIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ P E G+ L LP HV RA + + L +T V+NL DL ++P +++
Sbjct: 214 EAFPQLMEQGNSLLCFLPLAHVLARAIAVTALTARVTLGHTPDVKNLVADLGTFRPTFVV 273
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP V+E +Y+ +++ + + A ++++ K G L K
Sbjct: 274 AVPRVFEKVYNSAKQKAHSEGKGKIFDAAEATAVAYSEAQDKG---GAGLGLQLK----- 325
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
HL+ +KLVY K+++A+G A VSGG L + F+ I
Sbjct: 326 -------------------HLVFDKLVYGKLRAALGGRCVAAVSGGAPLGARLAHFFRGI 366
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GV V GYGLTE+S T +G+VG P+N T ++I D G V +
Sbjct: 367 GVPVFEGYGLTETSAAANVNTQTAFRVGTVGKPVNGTSVRIAD-----------DGEVLL 415
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G V + Y+ NP ATK+AL DGW +TGD+G + P G L + GR K+ I
Sbjct: 416 KGDVVFRAYYNNPQATKEAL-TDGWFHTGDLGELDPD----------GFLKITGRKKEII 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
V + G+NV P LE+ S L+ Q +V+G + A++ D+E
Sbjct: 465 VTAGGKNVAPSGLEDTIKASPLVSQAMVVGDQRPFIAALVTVDEE 509
>gi|227114206|ref|ZP_03827862.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 601
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/584 (27%), Positives = 270/584 (46%), Gaps = 65/584 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q I A L +G+ +E++++FS NS W +AD +L AI+V + ++S + I
Sbjct: 45 QRIQRIASALLALGLDVQERVAIFSHNSMNWSLADLALLHLRAISVPIYATNTSAQAAFI 104
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
N ++ + V E + + + +R II++ + DI + + F +
Sbjct: 105 INDADIRTIFVGGQEQLDALLALRDTCPQLRNIIVMDEGVNLRGSDIAQSLQEFEAQAVD 164
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
D R+ +A DS D +D+ T +YTSGTTG PKGVML + N+ Q++
Sbjct: 165 DFWRDEWQARIDSRDL-----------NDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLH 213
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMIS 296
D + D L LP HV+ERA + I RG + +Y NL ++ +Q +P M +
Sbjct: 214 DDRLDMSENDVSLCFLPLSHVFERAWSFVIMHRGAQNVYLNNTNLVREAMQTVKPTVMCA 273
Query: 297 VPLVYETLYSGIQKQIFTSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
VP YE +YS I +++ + R R+ A+ + +A+ A + +G R
Sbjct: 274 VPRFYEKVYSAIHEKVAQAPWYRQRLFNWAIAQGQYAFLASQTAKKGGLFRR-------- 325
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
+H A++LV K++ +G + + G L +I LF+ +I
Sbjct: 326 -----------------VMHHYADRLVLGKLRQLLGGEIRFMPAAGARLDDNIILFFRSI 368
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+++ GYG+TE+ ++ LGS+G P+ E++I G + ++V
Sbjct: 369 GIRIIYGYGMTETCATVSCWEEGRFRLGSIGTPLPGIEVRI-----------GEEKEIQV 417
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG+ +M+GYF P T EDGWL TGD G + G L + R KD +
Sbjct: 418 RGATIMRGYFHRPQETADTFTEDGWLKTGDAGELD----------ANGNLFITERLKDLM 467
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P LE + I Q+ +I ++ A+IVP E + A +++ + D
Sbjct: 468 KTSGGKYIAPQHLEGTLGQDRFIEQVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHD 527
Query: 595 ASELSKEKTISLLYG----ELRKWTSKCSFQIGPIHVVDEPFTV 634
EL + I L+ E++K S+ Q+ ++ PF++
Sbjct: 528 RLELLRHSHIIELFEQRLREIQKELSRVE-QVKKFTLLPVPFSM 570
>gi|332876876|ref|ZP_08444630.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685159|gb|EGJ58002.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 597
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 273/558 (48%), Gaps = 77/558 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
GV P++ + + S N+ +W + D L A+ V + +++E+ L++ NH+E L V +
Sbjct: 56 GVAPQQTVGILSQNTPQWTLTDLACLQIRAVTVPIYTSNTAEQALYVMNHAEIKFLFVGD 115
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK----- 185
+ + + E +++ IIL +D+ I L +
Sbjct: 116 EKQYLKALEVADQCLSLQKIIL--------------------FDDHIQLKEQKYSIHWTD 155
Query: 186 --AFSDSN--DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
AF ++N D + ++ D+ T +YTSGTTG PKGVMLT++NL +Q+ +
Sbjct: 156 FLAFGNNNALDEELQQRIDSRDLSDLFTVIYTSGTTGEPKGVMLTYENLAYQMLGHSQRL 215
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLV 300
++ D LS LP HVYERA F + I + Y NL ++ L +P M +VP
Sbjct: 216 EVDDTDSSLSFLPLTHVYERAWTSFCLYKAIVVYYLEDTNLVREALAEVRPTLMCAVPRF 275
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE +++ + + SS A+R++ + ++ +R+ L ++PS+L
Sbjct: 276 YEKIFATVHDKADASSFAKRMLFKLAVKTG------RRV---LTLKEQNRKPSFL----- 321
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
L + +K+VY K+++ +G K GG +L I F+++IG+ V+
Sbjct: 322 ----------LKKAYNFFDKMVYTKLKAVLGGRIKFMPCGGANLEPSIGRFFQSIGINVK 371
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
+GYG+TE++ ++ L SVG + + +++I E NE+L V+G V
Sbjct: 372 LGYGMTETTATVSCWGDNRFNLQSVGTLMPNVQVRI--GEDNEIL---------VKGGMV 420
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GY+KNP T +A DG+L TGD G I +++ L + R K+ + S G
Sbjct: 421 MKGYYKNPEETAKAFTPDGFLRTGDAGKIDENNN----------LFITERIKELMKTSNG 470
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P +E + +LI QI VI ++ A+IVP+ E + A K L+I + + ++L
Sbjct: 471 KYIAPQLIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEILTQAFKDLNIKYKNTADLI 530
Query: 600 KE-KTISLLYGELRKWTS 616
K + I + +L+K+ S
Sbjct: 531 KHSQVIEYIGKQLQKFQS 548
>gi|334366829|ref|ZP_08515752.1| AMP-binding enzyme [Alistipes sp. HGB5]
gi|313157026|gb|EFR56458.1| AMP-binding enzyme [Alistipes sp. HGB5]
Length = 635
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 168/628 (26%), Positives = 288/628 (45%), Gaps = 77/628 (12%)
Query: 30 NCVDAVATRIRISRRNHR-FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
V+ + + + HR F ++ ++ L+ GL IG++P++K+++ ++ S W
Sbjct: 11 GSVEKYGAKTFLLEKKHRAFEPTTYAETKELALETGAGLAAIGIRPKDKVAILAEGSNAW 70
Query: 89 LVADQGMLATGAINVVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
+V++ GM GA++V + S +LL H+E AL V + +I +
Sbjct: 71 IVSELGMFYAGAVSVPLSVKLEESNDLLFRMRHAEVKALFVSKYQL-PKIRRIRTELPGV 129
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
+ II ++ IP+ + + R + + + IG+DD
Sbjct: 130 KHII------------VIGHIPLEPGETALGTLRRLGRDYLSKHREEFLAIGRGIGNDDY 177
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
AT YTSGTT +PKGV+LTH+N + + + + L +LP H + G++I
Sbjct: 178 ATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSFRTLIILPLDHCFAHVVGFYI 237
Query: 268 F----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 317
G M T ++N+ +++ +PH+++SVP + + I+ I
Sbjct: 238 MIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSVPALAKNFRKNIEGSIRAKGR 296
Query: 318 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 377
+ +R ++ Y +G+ R Q W +LWP L
Sbjct: 297 FTERLFNLALRTAYLYNK-----DGYG--RGQ----------GW------RVLLWPAVRL 333
Query: 378 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
+ ++++K++ A G S + V GG L + F+ AIG+ + GYGL+E++PVI+ P
Sbjct: 334 FDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGIPMFQGYGLSEATPVISTNSP 393
Query: 437 TC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 494
+ GS G + ++KIVD EV P G KG + +RG VM GY+KNP A+ + +
Sbjct: 394 KYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVIRGENVMAGYWKNPEASAETV 452
Query: 495 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-R 553
DGWL+TGD+G+++ L + GR K ++ S GE P +EEA + +
Sbjct: 453 -RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLLIASDGEKYSPEGMEEAIVDK 501
Query: 554 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 613
S I QI++ GAI+VP++E A +R A E E +L GE+ +
Sbjct: 502 SPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRGIAGEKRAETAAEILGGEIDR 557
Query: 614 WTSKCSFQ--------IGPIHVVDEPFT 633
+ + F + +VDEPFT
Sbjct: 558 YRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|315223493|ref|ZP_07865349.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|420160444|ref|ZP_14667227.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314946528|gb|EFS98520.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|394760638|gb|EJF43152.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 599
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 273/548 (49%), Gaps = 60/548 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++P+E + + + N+ +W +AD L AI V + +++E+ L++ NH+E L V +
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+ + + E ++ I++ + P + E+ +++ + LG S
Sbjct: 117 EKQYQKALEVASQCPTLQMIVVC----DNEVP-LTEKQYSIHWNDFLALGN------SPQ 165
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKF 249
D + DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D
Sbjct: 166 YDTELDKRIAERNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTS 225
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGI 308
L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE +++ +
Sbjct: 226 LAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATV 285
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
+ SS V R L R++ A KR+ L K+PS+
Sbjct: 286 HDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------------- 322
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+L + +K+VYKK++ A+G K GG +L I F+++IG+ +++GYG+TE+
Sbjct: 323 -VLQKAYNFFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTET 381
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
+ I+ SVG+ + + +++I E NE+L V+G VM+GY+KNP
Sbjct: 382 TATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNP 430
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T +A DG+L TGD G + +++ L + R K+ + S G+ + P +
Sbjct: 431 EETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMI 480
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 606
E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K + I
Sbjct: 481 EGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEY 540
Query: 607 LYGELRKW 614
+ +L+K+
Sbjct: 541 IGKQLQKF 548
>gi|390948342|ref|YP_006412102.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
gi|390424911|gb|AFL79417.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
Length = 635
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 168/628 (26%), Positives = 289/628 (46%), Gaps = 77/628 (12%)
Query: 30 NCVDAVATRIRISRRNHR-FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
+ V+ + + + HR F ++ ++ L+ GL IG++P++K+++ ++ S W
Sbjct: 11 SSVEKYGAKTFLLEKKHRAFEPTTYAETKELALETGAGLAAIGIRPKDKVAILAEGSNAW 70
Query: 89 LVADQGMLATGAINVVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
+V++ GM GA++V + S +LL H+E AL V + +I +
Sbjct: 71 IVSELGMFYAGAVSVPLSVKLEESNDLLFRMRHAEVKALFVSKYQL-PKIRRIRAELPEV 129
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
+ II ++ IP+ + + R + + + IG+DD
Sbjct: 130 KHII------------VIGHIPLEPGETALGTLRRLGRDYLSKHREEFLAIGRGIGNDDY 177
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
AT YTSGTT +PKGV+LTH+N + + + + L +LP H + G++I
Sbjct: 178 ATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSFRTLIILPLDHCFAHVVGFYI 237
Query: 268 F----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 317
G M T ++N+ +++ +PH+++SVP + + I+ I
Sbjct: 238 MIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSVPALAKNFRKNIEGSIRAKGR 296
Query: 318 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 377
+ +R ++ Y +G+ R Q W +LWP L
Sbjct: 297 FTERLFNLALRTAYLYNK-----DGYG--RGQ----------GW------RVLLWPAVRL 333
Query: 378 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
+ ++++K++ A G S + V GG L + F+ AIG+ + GYGL+E++PVI+ P
Sbjct: 334 FDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGIPMFQGYGLSEATPVISTNSP 393
Query: 437 TC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 494
+ GS G + ++KIVD EV P G KG + +RG VM GY+KNP A+ + +
Sbjct: 394 KYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVIRGENVMAGYWKNPEASAETV 452
Query: 495 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-R 553
DGWL+TGD+G+++ L + GR K ++ S GE P +EEA + +
Sbjct: 453 -RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLLIASDGEKYSPEGMEEAIVDK 501
Query: 554 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 613
S I QI++ GAI+VP++E A +R A E E +L GE+ +
Sbjct: 502 SPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRGIAGEKRAETAAEILGGEIDR 557
Query: 614 WTSKCSFQ--------IGPIHVVDEPFT 633
+ + F + +VDEPFT
Sbjct: 558 YRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|238060302|ref|ZP_04605011.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
gi|237882113|gb|EEP70941.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
Length = 605
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 249/536 (46%), Gaps = 77/536 (14%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V C + E++ A GL GV P ++++L S W + D + A+GA+ V S
Sbjct: 52 VTCR-QFRDEVVAVARGLVAAGVSPGDRVALMSRTRYEWTLFDYAIWASGAVTVPIYETS 110
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
S+E+ I S +VA VE +A + + ++ +W +I
Sbjct: 111 SAEQAAWILADSGAVAAVVETTTHATLVAGI---RDRLPALVDIW------------QIE 155
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ + DE++ G + + A + + +DDIAT +YTSGTTG PKG +LTH+N
Sbjct: 156 LGAVDELVAAG-------ASVDPAEIDRRRSAVQADDIATIIYTSGTTGRPKGCVLTHRN 208
Query: 230 LLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERACGYFIF-SRGIELMYTAVRNLKDD 285
+ I + +P G L LP H + R + +R T +NL +
Sbjct: 209 MYADIANAVPALPNLFLRPGASTLLFLPLAHSFARLIQIGVVQARATMAHCTDTKNLVGE 268
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA-LIRISFAYTAFKRIYEGFC 344
LQ ++P +++SVP V+E +Y+G +Q + R+ RA + ++++ K G
Sbjct: 269 LQAFRPTFVLSVPRVFEKVYNG-ARQKAEADGKGRIFDRAEQVAVAYSEALEKPGGPGLA 327
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSL 403
L R Q H + ++LVY+K+++A+G + +SGG L
Sbjct: 328 L-RAQ-------------------------HAVFDRLVYRKLRAALGGRCRDAISGGAPL 361
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ F+ IGV + GYGLTE+SP + P +G+VG P+ I+I D
Sbjct: 362 GARLGHFFRGIGVTICEGYGLTETSPAASVNLPDATKIGTVGRPLPGVTIRIDD------ 415
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
G + + G+ + QGY++N +AT +AL DGW TGD+G + G
Sbjct: 416 -----DGEILISGNLIFQGYWRNETATAEALSPDGWFRTGDLGQL----------DTDGF 460
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L + GR K+ IV + G+NV P LE+ LI Q VVIG Q A++ D+E
Sbjct: 461 LSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVIGDRQPFIAALVTIDEE 516
>gi|387131449|ref|YP_006294339.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
gi|386272738|gb|AFJ03652.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
Length = 610
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 266/584 (45%), Gaps = 79/584 (13%)
Query: 31 CVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLV 90
C D A + + R+ + ++I + L G+ P E+++L N W+
Sbjct: 32 CPDNTAYQY-FDAASQRWHSLTWQQTAEQISRWQRALASAGLTPGERVALNLRNCPEWVY 90
Query: 91 ADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFI 150
D ++ G + V + + +I ++S L +++ + ++ L + A+ +
Sbjct: 91 FDIAAMSLGLVTVPLYPEDRPDNMAYILEQTDSKILLLQSKRQWQQLKSALTEQHAIEKV 150
Query: 151 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 210
++L ++ D +I V D +D Y ++T+ D+ Y
Sbjct: 151 VIL-----NLEKDEEGDIAVLDSDRWLD-----------------RYPHQTLIRKDLDGY 188
Query: 211 -----VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 265
+YTSGTTG PKGVML+H+N+L + D FLS LP H ER GY
Sbjct: 189 KLASIIYTSGTTGRPKGVMLSHQNMLSVAYGALQFFDVFHDDVFLSFLPLSHTLERTGGY 248
Query: 266 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 323
++ G + Y+ V L DDL++ +P +I+VP ++E + + +Q+ T S ++ +
Sbjct: 249 YLPMMAGASVTYSRGVAKLPDDLRQVKPTILIAVPRLFERFSAQLNQQLATKSWFQKCLF 308
Query: 324 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 383
+ +I + ++R QKQ ++ V ILWP +L K+
Sbjct: 309 KLVI-----HAGWRR------FLWQQKQANWHV-----------IQILWP--ILGNKIAD 344
Query: 384 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 443
K +Q G + VSGG +LP + + + +++ GYGLTE+SP+I+ P N S
Sbjct: 345 KFLQRLGGRLRLAVSGGAALPGYAAKLFIGLQLRLIQGYGLTETSPIISVNPPEKNRPQS 404
Query: 444 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 503
VG PI KI D E E+L V G M GY+ N AT Q +D DGWL+TG
Sbjct: 405 VGPPIPGVTTKI-DPENQELL---------VDGPGKMLGYWNNHKATAQTIDVDGWLHTG 454
Query: 504 DIGWIAPHHSRGRSRRCG--GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
D +C G + + GR KD +VLS GE P ++E A L+ L Q +
Sbjct: 455 D------------QAKCDEQGYIHITGRIKDILVLSNGEKFPPSDIENALLQDPLFEQAI 502
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
V+G+ Q A++V D E A+ L + + L ++KT+
Sbjct: 503 VVGEGQSYLAALLVLDGEAWQALAQSLGLDPMRSDSL-QDKTLQ 545
>gi|114330717|ref|YP_746939.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
gi|114307731|gb|ABI58974.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
Length = 612
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 244/510 (47%), Gaps = 64/510 (12%)
Query: 72 VKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENP 131
+ P +++++ N +W++ +Q L G + V +E +++ + L +EN
Sbjct: 75 LSPGDRVAIMVRNCPQWVMFEQAALGLGLVVVPLYIEDRAENAAWCLDNAGASLLLLENM 134
Query: 132 EFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSN 191
+ ++ ++ I+++ S+ + D+ + + I L + +S
Sbjct: 135 ARWEAFSQVAGQLGQLKRIVIM----STTSQDV----HLTGHQRAIALRDWLPEKPENSP 186
Query: 192 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 251
A D +AT +YTSGTTG PKGVML+H N+L + IV D LS
Sbjct: 187 LAENQ-------PDSLATIIYTSGTTGRPKGVMLSHHNILSNAHACAQIVTVTPDDILLS 239
Query: 252 MLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LP H +ER GY+ G + Y + R L +DL +P +ISVP +YE +Y GIQ
Sbjct: 240 FLPLSHTFERTAGYYTPMLCGATIAYARSTRQLSEDLLIIRPTILISVPRIYERIYVGIQ 299
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
+++ SA R++ + + + ++ +++ G+ ++
Sbjct: 300 EKLAEGSAVARLLFKLAVDVGYSRFEYQQGRTGWRISH---------------------- 337
Query: 370 ILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 428
+LWP L ++L+ +K+ +G V SGG +L + + A+G+ + GYGLTE+S
Sbjct: 338 LLWP---LLDRLIARKVMEKLGGRLWQVMSGGAALSPEVSHTFIALGLPILQGYGLTETS 394
Query: 429 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 488
PV+ A R NV SVG PI E+K+ G + + +RG VM GY+ NP
Sbjct: 395 PVVCANRLNDNVPASVGKPIPGVEVKL-----------GEQNALLIRGPNVMLGYWNNPE 443
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
AT L DGWL++GD I +GR + + GR KD IV STGE + P ++E
Sbjct: 444 ATSAILSADGWLDSGDTAQI---DEQGR-------ITITGRLKDIIVTSTGEKIPPADME 493
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
A L + Q+++IG+ + A++V K
Sbjct: 494 AAILHDPIFEQVMIIGEGRSYLSALVVLSK 523
>gi|393780659|ref|ZP_10368867.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608113|gb|EIW90975.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 599
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 276/548 (50%), Gaps = 60/548 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++P+E + + + N+ +W +AD L AI V + +++++ L++ NH+E L V +
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAKQALYVMNHAEVKVLFVGD 116
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+ +++ E ++ I++ + P + E+ +++ + LG S
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVC----DNEVP-LTEKQYSIHWNDFLALGN------SPQ 165
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKF 249
D + DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D
Sbjct: 166 YDTELDKRIAERNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTS 225
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGI 308
L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE +++ +
Sbjct: 226 LAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATV 285
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
+ SS V R L R++ A KR+ L K+PS+
Sbjct: 286 HDRADASS----FVKRKLFRLAIA--TGKRV---LTLREQGKKPSF-------------- 322
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++GYG+TE+
Sbjct: 323 -VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTET 381
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
+ I+ SVG+ + + +++I E NE+L V+G VM+GY+KNP
Sbjct: 382 TATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNP 430
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T +A DG+L+TGD G + +++ L + R K+ + S G+ + P +
Sbjct: 431 EETAKAFTPDGYLHTGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMI 480
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 606
E + +LI QI VI ++ A+IVP+ E + A K L+I + +++ K + I
Sbjct: 481 EGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEY 540
Query: 607 LYGELRKW 614
+ +L+K+
Sbjct: 541 IGKQLQKF 548
>gi|184201148|ref|YP_001855355.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183581378|dbj|BAG29849.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 602
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/542 (29%), Positives = 253/542 (46%), Gaps = 79/542 (14%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
R R + E++ A G+ G++P +++ L S W + D + GA+ V
Sbjct: 42 RERDVTAREFRAEVVALARGMAAQGIRPGDRVGLLSRTRYEWTLVDFALWWLGAVPVPVY 101
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAET---LCSKAAMRFIILLWGKKSSVAPD 163
SS +++ I + S + A+ VE+ E R+ E AA R +
Sbjct: 102 DTSSPDQIAWILSDSRATAVFVESDELAQRVREADGITAFPAAQRIRVF----------- 150
Query: 164 IVEEIPVFSYDEIIDLG--RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
+ P S + ++ G RE + Y+ + DD AT +YTSGTTG PK
Sbjct: 151 -DTDTPELSLEAVVQAGAGREDLET-----------PYDGVSLDDAATLIYTSGTTGPPK 198
Query: 222 GVMLTHKNLLHQIRSLYDIVP--AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA- 278
G LTH+N + ++ + G + L LP HV+ R GI L +T
Sbjct: 199 GCELTHRNFVACSQNAIPVAGELMHEGARTLLFLPLAHVFARFVEVTSLDAGIALAHTPD 258
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
V L DDL R++P ++++VP V+E + +G + + S ++++ + + A++ +
Sbjct: 259 VSQLMDDLARFKPTFILAVPRVFEKILAGARFKAQAGSPVKKLIFERAVATAAAWSKASQ 318
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 397
+ + P WL AR H L +KLVY ++ A+G + V
Sbjct: 319 --------QGRVSP--------WLAAR---------HRLYDKLVYSTLREAMGGEVRYAV 353
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGG +L ++ F+ IGV V GYGLTE++ I+A P+ N LG+VGHP+ E+ I
Sbjct: 354 SGGAALGEYLAHFFNGIGVFVVEGYGLTETTAPISANVPSINRLGTVGHPMPGNEVAI-- 411
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
AE E+L VRG V + Y P T +A DGW TGD+G +
Sbjct: 412 AEDGEIL---------VRGVNVFERYNGLPEKTAEAF-RDGWFATGDLGHLDDE------ 455
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G+L + GR K+ IV ++G+NV P +LE+ S+ + QI+V+G ++ A+I D
Sbjct: 456 ----GLLTVTGRKKEIIVTASGKNVIPTQLEDPIRASATVGQIMVVGDNRPFVAALITLD 511
Query: 578 KE 579
E
Sbjct: 512 PE 513
>gi|82701230|ref|YP_410796.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82409295|gb|ABB73404.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 663
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 258/560 (46%), Gaps = 66/560 (11%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR R +A+A R R + ++R +++++ I + L +KP +++ +
Sbjct: 51 FRERVRRTPEAIAYR-DYDRSSGKWRDLSWARMDERIAHWVIALSKEKLKPGDRVGIMLR 109
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++ +Q L G + V + +I + L +E + +E
Sbjct: 110 NCPEWVMFEQAALRLGLVVVPLYPTDRPDNAAYILQDAGVKVLLLEELGQWLAFSEVRDQ 169
Query: 144 KAAMRFIILLWG------KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHY 197
+ +I++ G + + + + + +P + E S + +H
Sbjct: 170 MTGLVRVIIIQGSVRQGHRGNELVLALHDWLPEWFPGERPTESLPSVEPLYQLPAEPEHQ 229
Query: 198 KYETIGSD--------DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 249
E + +AT +YTSGT+G+PKGVML+H N+L S +VP E D
Sbjct: 230 APEEVPPSRVLARDPHQLATIIYTSGTSGHPKGVMLSHHNILTNAHSCLQVVPIEESDVL 289
Query: 250 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 307
LS LP H +ER GY++ RG + Y ++ L++DL +P ++SVP +YE +Y+G
Sbjct: 290 LSFLPLSHTFERTAGYYVPMMRGSTVAYARSIPQLQEDLLIIRPTILVSVPRIYERVYAG 349
Query: 308 IQKQIFTSS-AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
I+ ++ +RR+ A + Y F+ + R +K S+
Sbjct: 350 IRAKLAEGPLLSRRLFDLA---VEIGYNRFE-----YQQGRAEKHFSH------------ 389
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 425
LWP L E LV KK+ S +G +A +SGG +L + + +G+ + GYG+T
Sbjct: 390 ---ALWP---LLEILVAKKVMSKLGGRLRAAMSGGAALSSEVSRIFIGLGLPILQGYGMT 443
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
ESSPV+ NV SVG PI E+K+ G + + +RG VM GY+
Sbjct: 444 ESSPVVCCNTIEDNVPASVGRPIPGVEVKL-----------GEQNALLIRGPNVMLGYWN 492
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
N AT+ + DGWLN+GDI I G + + GR K+ IV+STGE + P
Sbjct: 493 NEEATRAVMTPDGWLNSGDIAEIDE----------AGHIAITGRVKEIIVMSTGEKIPPA 542
Query: 546 ELEEAALRSSLIRQIVVIGQ 565
+E A LR L Q++V+G+
Sbjct: 543 NMEAAILRDPLFEQVMVVGE 562
>gi|340622816|ref|YP_004741268.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339903082|gb|AEK24161.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 592
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 270/579 (46%), Gaps = 102/579 (17%)
Query: 64 AEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ GL +GV+ E+K+++ S +N W + D +L GA NV S E+ +I+NH+E
Sbjct: 48 SRGLLRLGVRKEDKIAVISSNNRTEWHILDMAILQIGAQNVPVYPTISLEDYEYIFNHAE 107
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP----VFSYDEIID 178
V + + F +I I E++P ++++DE+ +
Sbjct: 108 CKYCFVSDQQLFEKIT------------------------SIREKLPLLEQIYTFDEVKN 143
Query: 179 ---------LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
LG ++ S+ N+ +H + + +DD+AT +YTSGTT PKGVML+H+N
Sbjct: 144 AQNWHILSELGADT----SNQNEVERHK--DNVKADDLATIIYTSGTTARPKGVMLSHRN 197
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQR 288
++ I + D +P + G + LS LP H++ER YF + + + ++ + D+L+
Sbjct: 198 IISNIINCQDRLPVKRGSRCLSFLPVCHIFERMLIYFYQYNCMRIYFAESIEKMGDNLRE 257
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P M VP + E +Y I + + + +R + + + F Y
Sbjct: 258 VKPQMMTVVPRLVEKVYDKIYAKGASLTGFKRKIFFWALNLGFDYE-------------- 303
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
L W + + +A KLV++K A+G + VSG L +
Sbjct: 304 ------LYGANGWFYQMKLA--------IARKLVFRKWHEALGGELELMVSGSAPLQSRL 349
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV--LGSVGHPINHTEIKIVDAETNEVLP 465
+ A G+ + GYGLTE++PVIA R +G+VG PIN+ E+KI D
Sbjct: 350 ARIFAAAGLHIVEGYGLTETAPVIAVNREAGRYWKIGTVGKPINNLEVKIAD-------- 401
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G + +G VM GY+K+P T+Q++ DG+ +TGDIG + + L
Sbjct: 402 ---DGEILCKGENVMLGYYKDPELTQQSIT-DGFFHTGDIGELDGEN----------FLK 447
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ R K+ S G+ + P +E +S I Q +V+G+ ++ P A I + E V A
Sbjct: 448 ITDRKKEIFKTSGGKYIAPQMIENLLKQSRFIEQAMVVGEGEKMPAAFIQINFEFVKEWA 507
Query: 586 KRLSI-VHADASELSKEKTISLLYGELRKWTSKCSFQIG 623
+R I + +E++K K + Y ++K K + +G
Sbjct: 508 RRHQIPLSGTYAEMAKNKAV---YDRIQKEVHKVNSHLG 543
>gi|420151040|ref|ZP_14658193.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751223|gb|EJF35022.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 599
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 275/548 (50%), Gaps = 60/548 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++P+E + + + N+ +W + D L AI V + +++E+ L++ NH+E L V +
Sbjct: 57 GIQPQETVGILAQNTPQWSLVDLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+ +++ E ++ I++ + P + E+ +++ + LG S
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVC----DNEVP-LTEKQYSIHWNDFLALGN------SPQ 165
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKF 249
D + DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D
Sbjct: 166 YDTELDKRIVERNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTS 225
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGI 308
L+ LP HV+ERA YF + + + Y NL ++ L +P M +VP YE +++ +
Sbjct: 226 LAFLPLSHVFERAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATV 285
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
+ SS V R L R++ A KR+ L K+PS+
Sbjct: 286 HDRADASS----FVKRKLFRLAIA--TGKRV---LALREQGKKPSF-------------- 322
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+L + L +K+VYKK++ A+G K GG +L I F+++IG+ +++GYG+TE+
Sbjct: 323 -VLQKAYNLFDKMVYKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTET 381
Query: 428 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 487
+ I+ SVG+ + + +++I E NE+L V+G VM+GY+KNP
Sbjct: 382 TATISCWGDDRINPQSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNP 430
Query: 488 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 547
T +A DG+L TGD G + +++ L + R K+ + S G+ + P +
Sbjct: 431 EETAKAFTPDGYLRTGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMI 480
Query: 548 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 606
E + +LI QI VI ++ A+IVP+ E + A K L++ + + +++ K + I
Sbjct: 481 EGKVGKYNLIEQIAVIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKHSQVIEY 540
Query: 607 LYGELRKW 614
+ +L+K+
Sbjct: 541 IGKQLQKF 548
>gi|118470901|ref|YP_888530.1| AMP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|399988555|ref|YP_006568905.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
gi|118172188|gb|ABK73084.1| AMP-binding enzyme [Mycobacterium smegmatis str. MC2 155]
gi|399233117|gb|AFP40610.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
Length = 599
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 246/525 (46%), Gaps = 71/525 (13%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
+I A GL GV+P +++++ S W + D +L+ GA+ V S++E++ +
Sbjct: 54 QIRSAALGLIAEGVQPGDRVAILSATRYEWPIIDFAILSIGAVTVPIYETSAAEQVRFVL 113
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
+SESV + E +++ + A+R + + G + + DE+ +
Sbjct: 114 ENSESVLVFAETDAHADKVEQLRDQLPALRKVFRIDGSGTP------------ALDELAE 161
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
G+ D + A + I S D AT +YTSGTTG PKG LTH NLLH+IR
Sbjct: 162 AGK-------DVDPAELDKRLANIKSSDPATLIYTSGTTGQPKGCQLTHSNLLHEIRGQK 214
Query: 239 DIVPAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ P G++ L LP HV RA F+ + L +T+ ++NL ++P +I
Sbjct: 215 ECFPDHLAKGERILVFLPLAHVLARAITIGAFANKVTLGFTSDIKNLVPMFGVFKPTLVI 274
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
SVP V+E +Y+ ++ AR + I+ A TA + F +++ P L
Sbjct: 275 SVPRVFEKVYNTAEQN------ARNDGKGKIFEIA-AETAIE-----FSKAQDKGGPGLL 322
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
+ + H + +KLVY K+++A+G A +SGG L + FY +
Sbjct: 323 LRV---------------KHAVFDKLVYGKLRAALGGECHAAISGGAPLGERLGHFYRGV 367
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ + GYGLTE+S I R +GSVG + ++I D G + V
Sbjct: 368 GLSIYEGYGLTETSAAITVNRLNDLKVGSVGRLVPGNSMRIAD-----------DGELLV 416
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G V GY+KN TK +D DGW +TGD+G I + G L + GR K+ I
Sbjct: 417 KGGVVFNGYWKNEDETKAVIDADGWFHTGDLGAIDDN----------GFLTIVGRKKEII 466
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
V + G+NV P LE+ LI Q + +G Q A+I D E
Sbjct: 467 VTAGGKNVAPALLEDRLRAHPLISQAMAVGDKQPFIAALITIDPE 511
>gi|313125292|ref|YP_004035556.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|448287112|ref|ZP_21478328.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|312291657|gb|ADQ66117.1| AMP-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|445572858|gb|ELY27388.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
Length = 677
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 160/573 (27%), Positives = 261/573 (45%), Gaps = 79/573 (13%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F ++ + + + A G R +GV+ ++ +FS W +D G+LA G +
Sbjct: 62 FSELTYGEMREIVRNLAAGFRELGVEAGSRVGIFSHTRMEWAQSDFGILAAGGAVTTVYT 121
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIV 165
SS ++ ++ + + + VEN E R+ + + + FI+L+ S + +
Sbjct: 122 SSSERQVRYLLSDPGATGVVVENAELLQRVL-AVEDELDLSFIVLIDDPADGSGMGGAVR 180
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
+ +++ ++ ++G AF + +A + + E S +A+ +YTSGTTG PKGV L
Sbjct: 181 DRDDIYTLGDVHEIGA---TAFDE--EAYQSWINERDPSS-LASLIYTSGTTGQPKGVKL 234
Query: 226 THKNLLHQIRSLY----------DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL 274
TH N + Y D+ NG LS LP HV ER G+F+ F+ G +
Sbjct: 235 THNNFRSNVNQCYKRFGPRPDKEDVPTLTNGMVTLSFLPLAHVLERLAGHFLMFASGACV 294
Query: 275 MYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 333
Y + L++D Q +P SVP VYE LY I+ + S +R+ +A
Sbjct: 295 AYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRSEASKSPTKKRI-------FEWAV 347
Query: 334 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS 393
+ +E P IL H LA+KLV+ +++ A+G
Sbjct: 348 DVGREYHE-------SDSPG---------------VILSAKHALADKLVFDQVREALGGR 385
Query: 394 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 452
+ +SGGGSL + Y +G+ + GYGLTE+SPVIA P +G++G P+ E
Sbjct: 386 IEFFISGGGSLSAELCALYHGMGLPILEGYGLTETSPVIAVNPPEEPKIGTIGTPVVDVE 445
Query: 453 IKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDED------------- 497
+K+ +V G G + V+G V +GY+ P T A +D
Sbjct: 446 VKLDKTVVGDVTGDAGGDVGELLVKGPNVTEGYWNRPEETAAAFTDDVPSDANGESESEG 505
Query: 498 ---GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 554
GW TGD+ + P G + RAK +VLSTG+NV P +E++ S
Sbjct: 506 DSGGWFRTGDVVELRPD----------GYIAFRERAKQILVLSTGKNVAPGPIEDSFASS 555
Query: 555 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
++ Q +V+G ++ A+IVP EE+ A R
Sbjct: 556 DVVEQCMVLGDGRKFVSALIVPSFEEIREWADR 588
>gi|448570160|ref|ZP_21639154.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
gi|445723461|gb|ELZ75103.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
Length = 666
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 245/534 (45%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS + ++ +
Sbjct: 77 LAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQTQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS-YDEIIDLGR 181
+ A+ VEN R+ + + +RFI+ +V+E ++++ LG
Sbjct: 137 ADAVVVENEALLERVL-AVEDELDLRFIV------------VVDEYDGHDDREDVLTLGE 183
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY--- 238
R ++A + DD+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRCGEEAYDEAAYESWLDERDPDDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRF 243
Query: 239 -------DIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
D G LS LP HV+ER G+F+ F+ G + Y + L++D Q
Sbjct: 244 GPRPDKGDTPVIGPGAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 304 RPTVGTSVPRVYEKLYDAIRAQASESPAKKRVFEWA-VGVGQAY-------------HTT 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 350 DAPGYL---------------LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y A+G+ + GYGLTE+SPV++ P + ++G+P+ + E K+ + L
Sbjct: 395 ALYHAMGLPIYEGYGLTETSPVVSVNPPEAPKISTIGYPLRNVETKLDTTVVGDQLGEAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRG V +GY+ +P T+ A ED W TGD+ RR G
Sbjct: 455 GEVGELLVRGPSVTEGYWNDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDG 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|373958206|ref|ZP_09618166.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
gi|373894806|gb|EHQ30703.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
Length = 637
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 158/567 (27%), Positives = 266/567 (46%), Gaps = 63/567 (11%)
Query: 37 TRIRISRRNHRFRVFCESKLEQEI-----LDFAEGLRV----IGVKPEEKLSLFSDNSCR 87
T I NH F ++ E+ EI LD + + +G++ ++L+L +N
Sbjct: 17 TVTNIHPENHTFLIYKENDNWVEISYRQALDKIDAISAYMLDMGIRKGDRLALIIENGPD 76
Query: 88 WLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
++ DQ + GA+N S ++ +I N S + + V NP +I + + +
Sbjct: 77 YVYYDQALQQIGAVNTSIYPTLSETDIEYILNDSGARTILVGNPFLLRKIIKIANNCLEL 136
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
II + + + ++ +I+ GR+ +S + +A + E I D+
Sbjct: 137 MRIIPAFDDFEKHTDKVNLNAGLIAFANLIEEGRKCVSQYSQAINAAR----EAIIPSDL 192
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-FLSMLPPWHVYERACGYF 266
+ +YTSGTTG PKGVMLTH NL+ +R D +P + D+ FLS LP HV+ER Y
Sbjct: 193 SCLIYTSGTTGTPKGVMLTHSNLVENVRVCLDQIPVIDKDETFLSFLPLSHVFERTATYH 252
Query: 267 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 324
+ ++G ++ + ++ L ++ +P M VP + E ++ K ++ + +
Sbjct: 253 VCLAKGCKIAFAQSLDLLAKNMGEVKPTVMNCVPRLLERIHDKAMKNGTSAGGTKTKIFL 312
Query: 325 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 384
+ I Y + K+P + IL H +A+KLV+
Sbjct: 313 WALEIGKKYR---------LVQEAGKKPGF---------------ILQQQHKIADKLVFS 348
Query: 385 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 443
KI+ G K +SGGG+LP +I F+ +G+K+ G+GLTE+SPV++ V G+
Sbjct: 349 KIKEKTGGRLKFMISGGGALPKNIGEFFGDLGIKILEGFGLTETSPVMSVTEYHRQVYGT 408
Query: 444 VGHPINHTEIKIVDAETNEVL---------PA--GSKGIVKVRGSQVMQGYFKNPSATKQ 492
VG I E+ I + +T + PA +G + VRG VM+GY+ P T
Sbjct: 409 VGRIIPGIEVAIQNVDTGYIYSIQTHESFNPAFQSEEGEIIVRGHCVMKGYWNKPQETAV 468
Query: 493 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 552
A+D DGW +TGDIG R G L + R K+ +V + G+NV P +E L
Sbjct: 469 AIDVDGWFHTGDIG-----------RFFKGNLQITDRLKNMLVNAYGKNVYPTPVENTYL 517
Query: 553 RSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+S I + ++G + AI++P +E
Sbjct: 518 KSPKIEGLFLVGDKREYITAIVIPARE 544
>gi|227327104|ref|ZP_03831128.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 601
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 270/584 (46%), Gaps = 65/584 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q I A L +G+ +E++++FS NS W +AD +L AI+V + +++ + I
Sbjct: 45 QRIQRIASALLALGLDVQERVAIFSHNSMNWSLADLALLHLRAISVPIYATNTAAQAAFI 104
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
N ++ + V E + + + +R II++ + DIV+ + F +
Sbjct: 105 INDADIRTIFVGGQEQLDALLALRDTCPQLRNIIVMDEGVNLRGSDIVQSLCEFEAQAVD 164
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
D RE + DS D +D+ T +YTSGTTG PKGVML + N+ Q++
Sbjct: 165 DFWREEWQTRIDSRDL-----------NDLFTLIYTSGTTGEPKGVMLDYTNMAVQLKLH 213
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMIS 296
D + D L LP HV+ERA + I RG + +Y + NL + +Q +P M +
Sbjct: 214 DDRLDMSENDVSLCFLPLSHVFERAWSFVIMHRGAQNVYLSDTNLVRAAMQAVKPTVMCA 273
Query: 297 VPLVYETLYSGIQKQIFTSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
VP YE +YS I +++ + R R+ AL + A+ A + +G R
Sbjct: 274 VPRFYEKVYSAIHEKVAQAPWYRQRLFNWALAQGQHAFLASQAAKKGGLFRR-------- 325
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
+H A++LV K++ +G + + G L +I LF+ +I
Sbjct: 326 -----------------VMHRYADRLVLGKLRQLLGGEIRFMPAAGARLDDNIILFFRSI 368
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+++ GYG+TE+ ++ LGS+G P+ E++I G + ++V
Sbjct: 369 GIRIIYGYGMTETCATVSCWEEGRFRLGSIGTPLPGIEVRI-----------GEEKEIQV 417
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG+ +M+GYF P T + EDGWL TGD G + G L + R KD +
Sbjct: 418 RGATIMRGYFHRPQETAETFTEDGWLKTGDAGELD----------ANGNLFITERLKDLM 467
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P LE + I Q+ +I ++ A+IVP E + A +++ + D
Sbjct: 468 KTSGGKYIAPQHLEGTLGQDRFIEQVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHD 527
Query: 595 ASELSKEKTISLLYG----ELRKWTSKCSFQIGPIHVVDEPFTV 634
EL + I L+ E++K S+ Q+ ++ PF++
Sbjct: 528 RLELLRHSHIIELFEQRLREMQKELSRVE-QVKKFTLLPVPFSM 570
>gi|402831321|ref|ZP_10880009.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
gi|402282505|gb|EJU31045.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
Length = 597
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 164/591 (27%), Positives = 285/591 (48%), Gaps = 77/591 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+EI + L V +E + +F+ NS +W + D A V + +++++ +I
Sbjct: 43 EEIQKITKALLHYQVGVQENIGIFAPNSPQWTMVDMAAAHLRACAVPIYATNTADQAAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE---IPVFSYD 174
N++ L V E ++++ + + ++ ++L S+ D EE +P+ +
Sbjct: 103 INNAGIRILFVGEKEQYDKVEQIRQACPNLQLVVLF---NESLLKD--EEHVVLPLSKFV 157
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
++ G R+ + D+R D+ T +YTSGTTGNPKGVM+ ++N+ +Q
Sbjct: 158 ALVPKGHYERE-LKERFDSR--------CMQDLYTIIYTSGTTGNPKGVMIDYENVAYQF 208
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ D + G+ +S LP HVYER ++F +G+ Y N + + L+ +PHY
Sbjct: 209 INHDDRLAVVEGNVSMSFLPLSHVYERMWVAYVFHKGVINCYLDDTNRVAEALKEVKPHY 268
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M VP + E +Y+ I + + S +RVV RI+ +I G T+ K PS
Sbjct: 269 MCVVPRLLEKIYTKIYENVQKQSVVKRVVFATATRIA-------KIQLG--RTKKGKYPS 319
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYE 412
+ IL L+ LA+KLV++K+++A+G + + GG+ L I F+
Sbjct: 320 F---------------ILKKLYNLADKLVFQKLKAALGGNIQMIPCGGALLEPSIGRFFR 364
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIGV V +GYG+TE++ ++ L SVG + + + KI + NE+L
Sbjct: 365 AIGVNVTLGYGMTETTATVSCWDDHKFKLKSVGTLVPYVQAKI--GQDNEIL-------- 414
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
++G + +GY+ NP +A EDG+L TGD G++ G L + R K+
Sbjct: 415 -LKGGSISKGYYNNPEENAKAFTEDGYLRTGDAGYLDKE----------GNLYITERIKE 463
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P ++E + S I QI VI ++ A+IVP+ E + AK L++ +
Sbjct: 464 LMKTSNGKYIAPQQIEGKVGKDSFIEQIAVIADARKYVSALIVPNYEALAEYAKSLNLKY 523
Query: 593 ADASELSK--------EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
+ SEL K +K + L EL + QI ++ PF++N
Sbjct: 524 KNYSELIKNSQIVEFFQKRLQHLQQELAAYE-----QIKKFTLLTTPFSIN 569
>gi|448544962|ref|ZP_21625775.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448547339|ref|ZP_21626817.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448556217|ref|ZP_21631942.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445704740|gb|ELZ56649.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445716350|gb|ELZ68094.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445716969|gb|ELZ68698.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 666
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 248/534 (46%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS + ++ +
Sbjct: 77 LAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQTQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS-YDEIIDLGR 181
+ A+ VEN R+ + + +RFI+ +V+E + ++++ LG
Sbjct: 137 ADAVVVENEALLERVL-AVEDELDLRFIV------------VVDEYDGYDDREDVLTLGE 183
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-I 240
R+ ++A + +DD+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRRGEEAYDEAAYESWLDERDTDDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRF 243
Query: 241 VP-AENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRY 289
P + GD LS LP HV+ER G+F+ + + L++D Q
Sbjct: 244 GPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P SVP VYE LY I+ + S A +RV A + + AY
Sbjct: 304 RPTVGTSVPRVYEKLYDAIRAEAGESPAKKRVFEWA-VGVGQAY-------------HTT 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 350 DAPGYL---------------LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+ + L
Sbjct: 395 ALYHAMGLPIYEGYGLTETSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQAL---DEDG-WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRG V +GY+ +P T+ A DE G W TGD+ RR G
Sbjct: 455 GEVGELLVRGPSVTEGYWNDPEETEAAFVGDDEGGRWFRTGDV----------VERRPDG 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|448566848|ref|ZP_21637103.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445713437|gb|ELZ65214.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 666
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 246/534 (46%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS ++ ++ +
Sbjct: 77 LAAGFRDLGIETGDRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQVQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS-YDEIIDLGR 181
+ A+ VEN E R+ + + +RFI+ +V+E D+++ LG
Sbjct: 137 ANAVVVENEELLERVL-AVEDELDLRFIV------------VVDEYEGHDDRDDVLTLGE 183
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-I 240
R+ ++A + +D+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRRGEEVYDEAAYESWLDEREPEDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRRF 243
Query: 241 VP-AENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRY 289
P + GD LS LP HV+ER G+F+ + + L++D Q
Sbjct: 244 GPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P SVP VYE LY I+ Q S A +R+ A + + AY
Sbjct: 304 RPTTGTSVPRVYEKLYDAIRAQASESPAKKRIFEWA-VGVGQAY-------------HTT 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 350 DAPGYL---------------LTAKHRLADRLVFGQVREALGDNLDFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+ + L
Sbjct: 395 ALYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVETKLDTTVVGDQLGDAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRG V GY+ NP T+ A ED W TGD+ + P G
Sbjct: 455 GEVGELLVRGPNVTAGYWNNPEETEAAFVEDDEGERWFRTGDVVELRPD----------G 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|404404087|ref|ZP_10995671.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes sp. JC136]
Length = 635
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 174/627 (27%), Positives = 294/627 (46%), Gaps = 98/627 (15%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ +R+ +F ++ +++ L+ GL G++P +K+++ ++ S W++++ G+ GA
Sbjct: 23 LEKRHRKFEPTTYAETKEQALEVGAGLASTGIRPGDKVAILAEGSNAWIISELGLFYAGA 82
Query: 101 INVVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
I+V + S +LL H+E A+ V + +I + +I+L
Sbjct: 83 ISVPLSVKLEESNDLLFRLQHAEVKAVFVSKYQL-PKIRRIRAELPQLEQVIVLG----- 136
Query: 160 VAPDIVEEIPVFS----YDEIIDLGRE----SRKAFSDSNDARKHYKYETIGSDDIATYV 211
IP+ S Y + LGR+ +R+ F A I +DD AT
Sbjct: 137 -------HIPLESGETAYGTLKRLGRDYLAKNREEFLKIGQA--------IQNDDYATIT 181
Query: 212 YTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF 268
YTSGTT +PKGV+LTH+N + Q S DI P + L +LP H + G++I
Sbjct: 182 YTSGTTSDPKGVILTHRNYTANVEQALSRVDIPPHY---RTLIILPLDHCFAHVVGFYIM 238
Query: 269 ----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 318
G M T ++N+ +++ +PH+++SVP + + GI+ I
Sbjct: 239 IACGASVATVQIGATPMET-LKNIPQNIREVKPHFLLSVPALAKNFRKGIESSIRAKGKF 297
Query: 319 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 378
+ +R ++AY +G+ W RI+ L P L
Sbjct: 298 TEGLFHLALRTAYAYNR-----DGYSKGSG--------------W-RIV---LKPFVALF 334
Query: 379 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 437
+ ++++K++ A G S K V GG L + FY AIG+ + GYGL+E++PVI+ P
Sbjct: 335 DAVLFRKVREAFGGSLKFFVGGGALLDAELQRFYYAIGIPMFQGYGLSEATPVISTNSPN 394
Query: 438 C--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 495
+ GS G + ++KI+D E EV P G KG + +RG VM GY+KNP AT +
Sbjct: 395 YHWHRFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVIRGENVMAGYWKNPDATADTV- 452
Query: 496 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RS 554
DGWL+TGD+G+++ L + GR K ++ S GE P +EEA + +S
Sbjct: 453 RDGWLHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYSPEGMEEAIVDKS 502
Query: 555 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 614
I QI++ GAI+VP++E +L + I + + ++ E +L E+ ++
Sbjct: 503 PYIDQIIIHNNQDPFTGAIVVPNREALLRELEARKIPEGEHAAVAAE----ILGAEIDRY 558
Query: 615 TSKCSFQ--------IGPIHVVDEPFT 633
+ F + +VDE FT
Sbjct: 559 RAGGVFAGEFPERWLPAGLAIVDEAFT 585
>gi|269127261|ref|YP_003300631.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
gi|268312219|gb|ACY98593.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
Length = 605
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 257/562 (45%), Gaps = 82/562 (14%)
Query: 30 NCVDAVATRIR------ISRR--NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLF 81
N DA+ +R R + RR + S+ E+ A+GL G++P ++++L
Sbjct: 17 NLTDALFSRARSNPGQVVLRRKSGDSWSPVTASQFVAEVSGAAKGLIAAGIEPGDRVALL 76
Query: 82 SDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETL 141
S W + D + A GA+ V SS+E++ I S + AL +E E R+ E
Sbjct: 77 SRTRYEWTLLDYAIWAVGAVTVPIYETSSAEQIEWIVTDSGAKALIIETAEHAARVDEIA 136
Query: 142 CSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYET 201
A ++ + W I + + LG E S++ + +
Sbjct: 137 DKPAHLKHV---W------------RIDDGAVAALTKLGAEV------SDETLEERRTGR 175
Query: 202 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGDKFLSMLPPWHV 258
G+D +AT +YTSGTTG PKG L+H N + R+ +E G L LP HV
Sbjct: 176 TGAD-LATLIYTSGTTGRPKGCELSHGNFVVTTRNAIKGALSEVAMEGSSTLLFLPLAHV 234
Query: 259 YERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 318
+ R GI L ++ + NL DL ++P ++++VP V+E +Y+G +++
Sbjct: 235 FARLIQVACIESGIVLGHSDIPNLLPDLASFKPTFLLAVPRVFEKVYNGAEQKAIAGGKG 294
Query: 319 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 378
+ A A I+++ G L +K +
Sbjct: 295 KIFKAAADTAIAYSKALDAPGGPGLGLKLKRK--------------------------VF 328
Query: 379 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 437
+ LVY+K++ A+G K VSGG +L + F+ +G+ + GYGLTE++ ++ RP+
Sbjct: 329 DLLVYRKLREAVGGQVKYAVSGGAALGERLGHFFRGVGIVILEGYGLTETTAPVSVNRPS 388
Query: 438 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 497
+G+VG P+ ++I D G + V+G VMQGY+ N +ATK+A+ ED
Sbjct: 389 ALRVGTVGQPVPGVTVRIAD-----------DGEILVKGVNVMQGYWANETATKEAI-ED 436
Query: 498 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 557
GW +TGDIG + G L + GR K+ +V + G+NV P LE+ LI
Sbjct: 437 GWFHTGDIG----------TMDADGFLKITGRKKEILVTAGGKNVAPAPLEDRLRAHPLI 486
Query: 558 RQIVVIGQDQRRPGAIIVPDKE 579
Q VVIG ++ A+I D E
Sbjct: 487 SQCVVIGDGRKFISALITLDNE 508
>gi|78186834|ref|YP_374877.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
gi|78166736|gb|ABB23834.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
Length = 610
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 282/586 (48%), Gaps = 67/586 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
+++ F+ L+ G +++++ S+N W +AD +L+ GAI+V ++
Sbjct: 47 FHEDVRRFSAYLKENGTAAGDRVAILSENRPGWYLADMAVLSLGAIDVPLYPSLPPNQIE 106
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I + A+ V N +I + + +I++ + +EE PV ++
Sbjct: 107 YILKDAGVRAVIVSNMLQLGKILSIWQNLPDLTQLIVM---------NRLEE-PV---ED 153
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
+IDL D + DD+AT +YTSGTTG PKGVMLTH+NL ++
Sbjct: 154 VIDLNNAKAAGTQLLLDKPWMLDGTKVDPDDVATIIYTSGTTGLPKGVMLTHRNLCENVK 213
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPHY 293
S +I+ + D LS LP H YER GY++ F+ G + + ++ + ++ +P
Sbjct: 214 SAAEIIRIDETDCSLSFLPLSHAYERTGGYYLLFACGASIYLAESIETVSLNITEARPTI 273
Query: 294 MISVPLVYETLYSGIQKQIFTSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
+ +VP +++ + + +QKQI T S + ++ A+ R + + ++ +
Sbjct: 274 IFTVPRLFDRIRTNMQKQISTESPLKQKIFNWAVSRGEHYHRSIEK----------KGSA 323
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
S L+ L H +A KLVY+K++ G + VSGG +LP F+
Sbjct: 324 SPLLTL---------------QHAVAGKLVYQKVKKRFGGRLRYFVSGGAALPQKTGEFF 368
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+A+G+ + G+GLTE+SP+ RP G+VG + + E+KI AE EVL
Sbjct: 369 QALGITILEGFGLTETSPITNVNRPEKVKFGTVGPTVANVEMKI--AEDGEVL------- 419
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
RG +M+GY+++ AT + + DGW ++GDIG I G L + R K
Sbjct: 420 --FRGPNIMKGYWQDREATAEVI-RDGWFHSGDIGEI----------DGDGYLKITDRKK 466
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
IV S G+N+ P+ +E + + Q++V+G+ + A+IVPD +++ A I
Sbjct: 467 HIIVTSGGKNIAPMPIENLIAENPYVDQVMVVGEKRPFLIALIVPDFQKLREFAASAGIT 526
Query: 592 HADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 634
D + L K I +Y +L + S+ ++ + EPFT+
Sbjct: 527 APDDAGLCAHKEIVQIYEKLLRSISRQLATHEKVRRFILAKEPFTI 572
>gi|441211758|ref|ZP_20975139.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium smegmatis
MKD8]
gi|440626316|gb|ELQ88150.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium smegmatis
MKD8]
Length = 599
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 246/525 (46%), Gaps = 71/525 (13%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
+I A GL GV+P +++++ S W + D +L+ GA+ V S++E++ +
Sbjct: 54 QIRSAALGLIAEGVQPGDRVAILSATRYEWPIIDFAILSIGAVTVPIYETSAAEQVRFVL 113
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
+SESV + E +++ + A+R + + G + + D + +
Sbjct: 114 ENSESVLVFAETDAHADKVEQLRDQLPALRKVFRIDGSGTP------------ALDALAE 161
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
G+ D + A + + I S D AT +YTSGTTG PKG LTH NLLH+IR
Sbjct: 162 AGK-------DVDPAELNKRLANIKSSDPATLIYTSGTTGQPKGCQLTHSNLLHEIRGQK 214
Query: 239 DIVPAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ P G++ L LP HV RA F+ + L +T+ ++NL ++P +I
Sbjct: 215 ECFPDHLAKGERILVFLPLAHVLARAITIGAFANKVTLGFTSDIKNLVPMFGVFKPTLVI 274
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
SVP V+E +Y+ ++ AR + I+ A TA + F +++ P L
Sbjct: 275 SVPRVFEKVYNTAEQN------ARNDGKGKIFEIA-AETAIE-----FSKAQDKGGPGLL 322
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
+ + H + +KLVY K+++A+G A +SGG L + FY +
Sbjct: 323 LRV---------------KHAVFDKLVYGKLRAALGGECHAAISGGAPLGERLGHFYRGV 367
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ + GYGLTE+S I R +GSVG + ++I D G + V
Sbjct: 368 GLSIYEGYGLTETSAAITVNRLNDLKVGSVGRLVPGNSMRIAD-----------DGELLV 416
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G V GY+KN TK +D DGW +TGD+G I + G L + GR K+ I
Sbjct: 417 KGGVVFNGYWKNEDETKAVIDADGWFHTGDLGAIDDN----------GFLTIVGRKKEII 466
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
V + G+NV P LE+ LI Q + +G Q A+I D E
Sbjct: 467 VTAGGKNVAPALLEDRLRAHPLISQAMAVGDKQPFIAALITIDPE 511
>gi|260913053|ref|ZP_05919535.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632640|gb|EEX50809.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
Length = 606
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 268/569 (47%), Gaps = 66/569 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+ +QEI F+ L + ++K+++F+ N RW +AD G L T AI V + S++++
Sbjct: 39 QQFQQEIDAFSYALLANNIDIQDKIAIFAHNMPRWTIADIGSLQTRAIVVPIYATSAAKQ 98
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I N+++ L V + E +N + + ++ I+ + K + ++ E S+
Sbjct: 99 VEYILNNADVKILFVGDQEEYNCALDIFENCPQLQKIVAM---KEDI--NLQEHPKAVSW 153
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
I G ++ + ++ D+ T +YTSGTTG PKGVML + NL HQ
Sbjct: 154 QSFIAEGSVQQQTLLQE-------RLDSKSLSDLFTLIYTSGTTGEPKGVMLDYANLAHQ 206
Query: 234 IR---SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRY 289
+ + + + D LS LP H++ERA ++ RG Y N +++ L
Sbjct: 207 LEAHDTAFTTLNVNQYDVSLSFLPFSHIFERAWVAYVLHRGAVNCYLEDSNKVREALSEL 266
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M +VP YE +Y+ + ++ +S RR + I I + F L R Q
Sbjct: 267 RPTLMCAVPRFYEKIYTAVWDKVQKASFIRRTIFNWAISIG---------QKRFELAR-Q 316
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+P I IL + LA+KLV K++ +G K GG L I
Sbjct: 317 TKP--------------IPFILRKKYALADKLVLSKLRKLLGGRIKMMPCGGAKLEPTIG 362
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
LF+ +IG+ +++GYG+TE++ ++ + S+G + TE+KI E NE+L
Sbjct: 363 LFFHSIGINIKLGYGMTETTATVSCWKDNSFDPNSIGTLMPGTEVKI--GENNEIL---- 416
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
VRG VM+GY+K P TK+ EDG+L TGD G G L +
Sbjct: 417 -----VRGGMVMRGYYKKPQETKETFTEDGFLKTGDAG----------EFDANGNLYITD 461
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R K+ + S G+ + P +E + I QI VI ++ A+IVP + AK+L
Sbjct: 462 RIKELMKTSNGKYIAPQYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFTSLEEHAKQL 521
Query: 589 SIVHADASELSKEKTISLLY----GELRK 613
+I + D EL K I ++ EL+K
Sbjct: 522 NIKYQDRMELIKHSEIIKMFEQRINELQK 550
>gi|350553696|ref|ZP_08922861.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
gi|349790080|gb|EGZ44004.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
Length = 604
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 168/575 (29%), Positives = 273/575 (47%), Gaps = 67/575 (11%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR+ D VA + + + ++ +++ +E+ + L+ G+K +++++
Sbjct: 20 FRIRLEQSPDKVAYQ-QFDAQQGQWVGSTWAEMAREVAKWQAALQAEGLKAGDRVAIMLR 78
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++ DQ L G + V + + + +I ++ + L +E + R+ +
Sbjct: 79 NCREWVMFDQACLGLGLVTVPLYTDDRPDNVAYILENAGAKLLLLEGKFQWQRLKAIHET 138
Query: 144 KAAMRFI-ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETI 202
+R I I P IP+ + + GRE + S ++ A
Sbjct: 139 LNRLRVISIQAIEADPQDTPAAPGPIPLTHWLD----GREG-ELISGTHSA--------- 184
Query: 203 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 262
D +AT VYTSGTTG KGVML+H NLL + + + FLS LP H ER
Sbjct: 185 --DSLATIVYTSGTTGRSKGVMLSHYNLLFNAYACTQCADIDASEVFLSFLPLSHTLERT 242
Query: 263 CGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 320
GY++ G E+ ++ +V+ L +DLQ +P +ISVP +YE +Y+ +Q + S
Sbjct: 243 AGYYMPMMLGAEVAFSRSVQQLPEDLQAIRPTVLISVPRIYERIYAKVQMGLEEKSP--- 299
Query: 321 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 380
+AR L ++ T ++R R Q + + L +LWP LLA +
Sbjct: 300 -LARKLFSLTLD-TGWQR------FERQQGRAGWHPKL-----------LLWP--LLA-R 337
Query: 381 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 439
+V KI + +G + VSGG LP I F+ +GV V GYG+TE+SPVI+ R N
Sbjct: 338 IVAGKITARLGGRLQYAVSGGAPLPPPIAQFFIGLGVPVYHGYGMTEASPVISVNRTDDN 397
Query: 440 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 499
+ S+G P+ E+KI G+ V R +MQGY+ N AT++ +D +GW
Sbjct: 398 IPASIGTPLPGVEVKI-----------GANDEVLTRSPCIMQGYWNNAEATREVIDAEGW 446
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 559
L+TGD H G L + GR K+ IVLS+GE V P ++E A L Q
Sbjct: 447 LHTGDKARYDEH----------GHLYITGRIKEIIVLSSGEKVPPADMEMAITLDPLFEQ 496
Query: 560 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
+V+G+ + AI+V ++E+ A+ L + D
Sbjct: 497 AMVVGEGKPFLSAIVVLNEEQWPAFAQSLELDPED 531
>gi|384190057|ref|YP_005575805.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384192846|ref|YP_005578593.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
gi|289177549|gb|ADC84795.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340365583|gb|AEK30874.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
Length = 629
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 242/522 (46%), Gaps = 76/522 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+GL G+K + +++FS W + D + A GA+ V S+ + I N S +
Sbjct: 86 AKGLIAFGIKKGDAVTIFSATRVEWGLLDFALAAVGAVTVPIYDTDSAAQAERILNDS-N 144
Query: 124 VALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
V LA+ +N E F+R+ L ++ I++L + A + +E + V E +D
Sbjct: 145 VKLAIADNQERFDRLDSVLDHCPSLERILML----DANAVEALEGLGVMVSSEELD---- 196
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+ ++ +DD+AT VYTSG+TG PKG L+H+N + R+ D VP
Sbjct: 197 --------------ERIASVNADDLATIVYTSGSTGTPKGAELSHRNFVSITRAAADCVP 242
Query: 243 A--ENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVP 298
E + L LP H + R YF F+ G+ + + L D+Q ++P ++++VP
Sbjct: 243 EVLEGNSRLLLFLPLAHCFARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFEPTFVLAVP 302
Query: 299 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 358
V+E +Y+ ++ T R+ A++ + FA + G T QK
Sbjct: 303 RVFEKVYNAASRKAGTGWKG-RLFAKS---VEFAREWTEMEQAGIAPTPKQKAE------ 352
Query: 359 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 417
H + EKLVY I+SA G K GG L + F+ IG+
Sbjct: 353 ----------------HAMYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLATFFNGIGLT 396
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
+ GYGLTE++ A R NV+G+VG P+ + ++I G ++V+G
Sbjct: 397 MIQGYGLTETAAPFAFTRVHDNVIGTVGQPVPGSSVRI-----------SPTGELEVKGQ 445
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V GY P T + EDGWL TGD+ I G + L GRAKD I+ +
Sbjct: 446 NVFLGYHNLPEKTTETFAEDGWLKTGDLASIDDE----------GHITLTGRAKDIIITA 495
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G+NV P+ +E+ ++ VV+G ++ GA+I D+E
Sbjct: 496 GGKNVSPIPMEQEISTCPIVEHAVVVGDNRPFVGAVITLDQE 537
>gi|85819007|gb|EAQ40166.1| long-chain-fatty-acid-CoA ligase [Dokdonia donghaensis MED134]
Length = 592
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 170/589 (28%), Positives = 268/589 (45%), Gaps = 93/589 (15%)
Query: 58 QEILD----FAEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSE 112
QE +D F+ GL +GVKP +K+++ S N W + D G+L GA NV S+E
Sbjct: 40 QEYIDKANAFSRGLLRLGVKPNDKIAVISMTNRTEWHICDVGILQIGAQNVPMYPTISAE 99
Query: 113 ELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP-VF 171
+ ++ NHSES + V E ++ E A D V + V+
Sbjct: 100 DYAYVLNHSESKYVFVSCTETLAKVRE---------------------AQDKVPSLQGVY 138
Query: 172 SYDEIIDLGRESR---KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
S+D+I + + DSN +++ +DD+AT +YTSGTTG PKGVML+H+
Sbjct: 139 SFDDIDGCDNWQKVLDQGADDSNQPEVQALMDSVKTDDLATLIYTSGTTGRPKGVMLSHR 198
Query: 229 NLLHQIRSLYDIVP-AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDL 286
N++ S + VP A G K LS LP H+YER Y + + + ++ + D+L
Sbjct: 199 NIVSNAISSTERVPTAGEGVKALSFLPICHIYERMITYLYQYNSVAIYFAESLETISDNL 258
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
+ +P M +VP + E +Y I + + ++ + + + Y + +
Sbjct: 259 KEVKPEIMTAVPRLLEKVYDKIIAKGADLTGIKKKLFFWAVDVGLEYEPYGK-------- 310
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
WL+ R + +A KL++ K Q A+G + K SG +L
Sbjct: 311 ------------NGWLYERKLA--------IARKLIFSKWQEALGGNLKVIASGSAALQP 350
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ Y A + V GYGLTE+SPV + R +G+VG I E+KI AE E+
Sbjct: 351 RLARIYNAAQMGVMEGYGLTETSPVCSVNDMRGGNFRIGTVGKLIKGVEVKI--AEDGEI 408
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
L V+G VM GY+K+ T + L ++G+ +TGDIG I G
Sbjct: 409 L---------VKGPNVMLGYYKDAEKTNEVL-KNGYFHTGDIGHIDED----------GF 448
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 583
L + R K+ S G+ V P LE +S I QI+VIG+ Q+ P A+I P+ E +
Sbjct: 449 LKITDRKKEMFKTSGGKYVAPQLLENRFKQSRFIEQIMVIGEGQKMPAALIQPNFEFLED 508
Query: 584 AAKRLSIVHADASELSKEKTISLLYGE--------LRKWTSKCSFQIGP 624
AK ++ + +L + Y + KW +F++ P
Sbjct: 509 WAKMKNVSYTTQKDLIANPEVQARYQKEVDEANESFAKWEKVKAFRLTP 557
>gi|373456317|ref|ZP_09548084.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371717981|gb|EHO39752.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 592
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 279/579 (48%), Gaps = 76/579 (13%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
I R+H ++ + ++ +++ A GL G++P +++++ S+N W V D +
Sbjct: 23 IFYRDHHWQTWSYREVGEKVRLLAHGLMARGLQPGDRIAILSENLPEWPVTDFAVFGLRG 82
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
+ V +++ +I N ++ A+ V+N +++I ++ +I + + V
Sbjct: 83 VVVPIYPTLMPQQIAYILNDAKVKAIFVQNALQYDKITAIKKEVPSLE-MIFTYEPLTGV 141
Query: 161 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
A ++D+++ G ++F ++ + ETI +++ + VYTSGTTG P
Sbjct: 142 A----------TFDKLLQEGAVHAQSFPNAFEE----SMETIDPEELCSLVYTSGTTGEP 187
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAEN------GDKFLSMLPPWHVYERACGYFI-FSRGIE 273
KGVML H+ + +DIV +E D FLS LP H+YER G++ RG
Sbjct: 188 KGVMLCHRGFV------FDIVQSEARLRLRADDVFLSFLPLSHLYERLAGHWCPIYRGAT 241
Query: 274 LMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
+ Y + + +D+ +P M+SVP +YE + + +Q++ SSA +AR + S
Sbjct: 242 IHYARGIDTVVEDIAVARPTIMVSVPRLYEKIANAMQEKAEQSSA----LARNIFYWSI- 296
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
G L ++K+ + V WL R + LAEKLV+ K+++ +G
Sbjct: 297 ---------GTGLEYHEKRRAGKVN--KWLERR---------YRLAEKLVFNKVKAKLGG 336
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ ++GG L + +EAIG+ + GYG+TE+ +IA P GS G PI+
Sbjct: 337 RFRHPIAGGAPLSVETLKIFEAIGLPIIEGYGMTETHLIIALTPPGEVRYGSCGKPIDGI 396
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
++KI D G V V G +M+GY+ P TK+ +D++GWL+TGDIG++
Sbjct: 397 KVKIAD-----------DGEVLVSGPLLMKGYYNKPDITKEVIDDEGWLHTGDIGYLDEE 445
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
+ L L R K+ IV S G+N+ P +E S I ++ ++G ++
Sbjct: 446 N----------YLFLTDRKKNIIVTSGGKNIAPAPIEHKLKTSKYIEEVCLVGDKRKFVS 495
Query: 572 AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 610
A++VP E + AK I L K + LY E
Sbjct: 496 ALVVPAYEILKEWAKSNKIDFDSMESLLKNDQVLKLYEE 534
>gi|374623848|ref|ZP_09696345.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373942946|gb|EHQ53491.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 606
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 266/587 (45%), Gaps = 76/587 (12%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR + +AVA R + + ++ ++ QE+ + L G KP +++++
Sbjct: 20 FRERVKRTPEAVAFR-QFDTASSSWQTRTWKEMAQEVARWQAALLKEGFKPGDRVAVMLR 78
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W++ DQ + G I V + + + +I + + L + + R+ E
Sbjct: 79 NCREWVIFDQASMGLGLITVPLYTDDRPDNIAYILQDAGARMLLLGGKAQWRRLQEVRDR 138
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE---IIDLGRESRKAFSD--SNDARKHYK 198
++ I+ VE IP + E ++ L +R + +++A H
Sbjct: 139 LETVQRIV------------SVEAIPKGDFSEEERLVSLDDWTRGLEGELITHEADPH-- 184
Query: 199 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 258
+AT VYTSGTTG KGVML+H N+L + P D FLS LP H
Sbjct: 185 -------GLATIVYTSGTTGRSKGVMLSHHNILSNAHASQQCAPMGADDLFLSFLPLSHT 237
Query: 259 YERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 316
ER G Y G ++ Y +++ L +DL +P MISVP +YE +Y I + S
Sbjct: 238 LERTAGCYMPMMVGAQVAYARSIQGLAEDLLTLRPTVMISVPRIYERIYGRINAGLEEKS 297
Query: 317 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 376
R + + I + ++ G+ P L LWP
Sbjct: 298 PLARKLFLTTVNIGWRRFEHQQGRAGW-------HPGLL---------------LWP--- 332
Query: 377 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 435
+ +K+V K+ S +G + V GG LP I F+ +G+ V G+G+TE+SPV++ R
Sbjct: 333 VLKKIVADKVTSRLGGRLRYAVCGGAPLPPPIARFFIGLGLPVFHGFGMTEASPVVSVNR 392
Query: 436 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 495
P N+ SVG P+ E+KI D +E+L VRG VMQGY+ N AT++ +D
Sbjct: 393 PDDNLPASVGAPLPGVEVKIGD--DDELL---------VRGPSVMQGYWNNEEATRETID 441
Query: 496 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 555
DGWL++GD + R G + ++ GR K+ +VL GE V P ++E A
Sbjct: 442 ADGWLHSGD---------KARFNEQGHIFII-GRIKEILVLGNGEKVPPADMEMAITLDP 491
Query: 556 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
+ Q +V+G+ + A++V + EE AK L + DA L K
Sbjct: 492 VFEQALVLGEGKAYLSALVVLNPEEWEKLAKTLEVDPRDAEVLRSRK 538
>gi|183602191|ref|ZP_02963559.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|241191423|ref|YP_002968817.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196829|ref|YP_002970384.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384194421|ref|YP_005580167.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|384195985|ref|YP_005581730.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|387821287|ref|YP_006301330.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|387822973|ref|YP_006302922.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423679955|ref|ZP_17654831.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183218684|gb|EDT89327.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|240249815|gb|ACS46755.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251383|gb|ACS48322.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794416|gb|ADG33951.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|345283280|gb|AEN77134.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|366040954|gb|EHN17467.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386653988|gb|AFJ17118.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|386655581|gb|AFJ18710.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 606
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 242/522 (46%), Gaps = 76/522 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+GL G+K + +++FS W + D + A GA+ V S+ + I N S +
Sbjct: 63 AKGLIAFGIKKGDAVTIFSATRVEWGLLDFALAAVGAVTVPIYDTDSAAQAERILNDS-N 121
Query: 124 VALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
V LA+ +N E F+R+ L ++ I++L + A + +E + V E +D
Sbjct: 122 VKLAIADNQERFDRLDSVLDHCPSLERILML----DANAVEALEGLGVMVSSEELD---- 173
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+ ++ +DD+AT VYTSG+TG PKG L+H+N + R+ D VP
Sbjct: 174 --------------ERIASVNADDLATIVYTSGSTGTPKGAELSHRNFVSITRAAADCVP 219
Query: 243 A--ENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVP 298
E + L LP H + R YF F+ G+ + + L D+Q ++P ++++VP
Sbjct: 220 EVLEGNSRLLLFLPLAHCFARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFEPTFVLAVP 279
Query: 299 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 358
V+E +Y+ ++ T R+ A++ + FA + G T QK
Sbjct: 280 RVFEKVYNAASRKAGTGWKG-RLFAKS---VEFAREWTEMEQAGIAPTPKQKAE------ 329
Query: 359 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 417
H + EKLVY I+SA G K GG L + F+ IG+
Sbjct: 330 ----------------HAMYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLATFFNGIGLT 373
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
+ GYGLTE++ A R NV+G+VG P+ + ++I G ++V+G
Sbjct: 374 MIQGYGLTETAAPFAFTRVHDNVIGTVGQPVPGSSVRI-----------SPTGELEVKGQ 422
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V GY P T + EDGWL TGD+ I G + L GRAKD I+ +
Sbjct: 423 NVFLGYHNLPEKTTETFAEDGWLKTGDLASIDDE----------GHITLTGRAKDIIITA 472
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G+NV P+ +E+ ++ VV+G ++ GA+I D+E
Sbjct: 473 GGKNVSPIPMEQEISTCPIVEHAVVVGDNRPFVGAVITLDQE 514
>gi|333029389|ref|ZP_08457450.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
gi|332739986|gb|EGJ70468.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
Length = 601
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/624 (26%), Positives = 285/624 (45%), Gaps = 67/624 (10%)
Query: 22 HGFRVFTRNCVDAVATRIRISRRNHRFRVFCE---SKLEQEILDFAEGLRVIGVKPEEKL 78
H V + RI + R++ + + Q + A L +GV+ E +
Sbjct: 4 HHLSVLVHRQAEKYGDRIALKYRDYELSQWIPITWKQFSQTVRQTANALVALGVEETENI 63
Query: 79 SLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIA 138
+FS+N L D A A+ + + SS + ++ N + L V ++
Sbjct: 64 GIFSENKPECLYVDFAAYANRAVTIPFYATSSPAQAQYMINDANIRFLFVGQQYQYDAAI 123
Query: 139 ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYK 198
L +++ II+ + KK + P I +++ + LG++ +++D + R
Sbjct: 124 RVLGHCHSLKQIII-FDKKVVLDPRDKSSI---YFEDFLSLGKDL--SYNDIVEQRTAKA 177
Query: 199 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD--IVPAENGDKFLSMLPPW 256
ET D+A +YTSGTTG PKGVML H N L IR ++D +V + D L+ LP
Sbjct: 178 SET----DLANILYTSGTTGEPKGVMLHHSNYLEAIR-IHDLRLVDITDKDISLNFLPLT 232
Query: 257 HVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 315
HV+ER Y SRG+++ V ++++ ++ +P M SVP +E +Y G++ +I +
Sbjct: 233 HVFERGWVYICVSRGVQVCINLVPQDIQIAIKEIRPTLMCSVPRFWEKVYLGVKDKIDNT 292
Query: 316 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 375
S + + +++ + R K+P ++ L +
Sbjct: 293 SGPMKQLMLNAVKVGREH--------NLNYIRLGKKPPRMLHL---------------KY 329
Query: 376 LLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 433
EK V + ++ IGI + G +LP+ + F A+G+ V GYGLTES+ ++
Sbjct: 330 KFYEKTVMQLLKKTIGIENGNFFPTAGAALPVEVAEFVYAVGINVITGYGLTESTATVSC 389
Query: 434 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 493
T +GSVG +++ ++KI D +E+L ++G + QGY+K P AT QA
Sbjct: 390 TWKTHFQIGSVGQVLDNVQVKIGDE--SEIL---------LKGKTITQGYYKKPDATAQA 438
Query: 494 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 553
DGW +TGDIG++ G L + GR KD S G+ + P LE +
Sbjct: 439 FTADGWFHTGDIGYMK-----------DGELYMTGRLKDLFKTSNGKYIAPQALETRLVI 487
Query: 554 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELR 612
I QI +I ++ A+IVP +V AK I +A+ EL I +Y G +
Sbjct: 488 DQFIDQIALIADQRKFVSALIVPVYSKVEEYAKEHGIQYANLDELLTHPQILQMYKGRID 547
Query: 613 KWTSKCSF--QIGPIHVVDEPFTV 634
+ ++ QI ++ EPF++
Sbjct: 548 TLQQQFAYYEQIKHFTLLKEPFSM 571
>gi|350561364|ref|ZP_08930203.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781471|gb|EGZ35779.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 630
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 165/601 (27%), Positives = 275/601 (45%), Gaps = 81/601 (13%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R + + E+ + L +G+ P ++L++ N W++ DQ L G + V +
Sbjct: 66 WRGYSWTDCAGEVGRWQHALAGLGLAPGDRLAILLRNCRHWVIFDQAALGVGLVTVPLYT 125
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
+ +I S + L +E+ + R+ + + +I L G + ++
Sbjct: 126 NDRPANIEYILQDSGARVLLLEDAAAWERLGSIRSTLDRLDAVIALHGPGRATVANL--- 182
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
P + + D G +S + D +A+ VYTSGT+G PKGVML+H
Sbjct: 183 YPAERW--LPDAGPQSAGGITRP--------------DTLASIVYTSGTSGRPKGVMLSH 226
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDD 285
+N L + D V + D+ LS LP H ER GY+ S GI Y +V L +D
Sbjct: 227 RNFLSNAHACLDAVAVSSADRLLSFLPLSHTLERTVGYYAAVSAGIATAYARSVTRLAED 286
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE-GFC 344
L + +P +I+VP V+E +++ I + +S RR + F R E G+
Sbjct: 287 LVQVRPTILIAVPRVFERMHARILGHVSAASPTRRRL-------------FDRAQELGWR 333
Query: 345 -LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 402
Q++ + AL+ LH L + +V ++++ +G + +SGG
Sbjct: 334 RFLHAQRRGRWSPALL--------------LHPLLDPVVGARVRARLGGRLRFAISGGAP 379
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
LP + F+ A GV V GYGLTE+SPVIA R N +VG + E++I E +E
Sbjct: 380 LPEAVGRFFIACGVPVLQGYGLTETSPVIAVNRLEDNEPATVGPALPGVEVRI--GEHDE 437
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
+ R VM GY+ + AT+ ALD DGWL+TGD I P G
Sbjct: 438 LC---------TRSPSVMAGYWNDRHATRAALDADGWLHTGDQARIGPR----------G 478
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
+ + GR KD +VLS GE V P ++E+A + + Q++VIG+ + A++V +
Sbjct: 479 HITITGRLKDILVLSNGEKVAPADVEQALAGTPWVEQVMVIGEGRPFLAALVVLRAGALP 538
Query: 583 MAAKRLSIVHADASELSKEKTI----SLLYGELRKWTSKCS-----FQIGPIHVVDEPFT 633
A+ + A A+ +T+ +++ L+ + + Q+ +VDEP+T
Sbjct: 539 GLARAAGLDPAPAATHDGARTLRRKPAVVAEVLKALQPRLAQFPGYLQLRAAVLVDEPWT 598
Query: 634 V 634
V
Sbjct: 599 V 599
>gi|298207821|ref|YP_003716000.1| long chain fatty-acid CoA ligase [Croceibacter atlanticus HTCC2559]
gi|83850459|gb|EAP88327.1| probable long chain fatty-acid CoA ligase [Croceibacter atlanticus
HTCC2559]
Length = 592
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 254/540 (47%), Gaps = 77/540 (14%)
Query: 58 QEILD----FAEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSE 112
QE +D + GL +GVKP +K+++ S +N W + D G+L GA +V S E
Sbjct: 38 QEFVDKGNQLSRGLLKLGVKPNDKIAIISTNNRTEWNIVDMGVLQIGAQDVPIYPTISEE 97
Query: 113 ELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+ ++ NHSES V + E N++ + + +++ + D + +
Sbjct: 98 DYEYVLNHSESTYCFVSDEEVLNKVNKIKANVPSLKEVYTF---------DSINGAK--N 146
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+DE++ LG + +N + DD+AT +YTSGTTG PKGVML+HKN++
Sbjct: 147 WDEVLKLGEDK------TNQEEVETLMANVKEDDLATLIYTSGTTGRPKGVMLSHKNIVS 200
Query: 233 QIRSLYDIVPAENG-DKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 290
+ +P G +K LS LP H+YER Y +G+ + + ++ + D+L+ Q
Sbjct: 201 NALASATRLPLNQGNEKALSFLPVCHIYERMLQYLYQYKGVNIYFAESLETISDNLKEVQ 260
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP + E +Y I + + ++ + + + Y + + G+ + K
Sbjct: 261 PQVMSAVPRLLEKVYDKIIAKGTDLTGVKKALFFWAVELGLKYEPYGQ--NGWWYEQKLK 318
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+A KL++ K Q A+G + KA SG +L +
Sbjct: 319 --------------------------VARKLIFSKWQEALGGNLKAIASGSAALQPRLAR 352
Query: 410 FYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ A GV V GYGLTE+SPV++ R +G+VG + E+KI D
Sbjct: 353 VFNAGGVPVMEGYGLTETSPVVSVNDMRDGGLRIGTVGKLLPDVEVKIAD---------- 402
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G + V+G VM GY+K+ T + L +DG+ +TGDIG + G L +
Sbjct: 403 -DGEILVKGPNVMLGYYKDTEKTDEVL-KDGYFHTGDIGEVDKD----------GFLKIT 450
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
R K+ S G+ + P LE +S I QI+V+G+ ++ P A+I P+ E + AK+
Sbjct: 451 DRKKEMFKTSGGKYIAPQLLENKMKQSRFIEQIMVVGEGEKMPAALIQPNFEFLEDWAKK 510
>gi|332288204|ref|YP_004419056.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
gi|330431100|gb|AEC16159.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
Length = 600
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/601 (27%), Positives = 275/601 (45%), Gaps = 73/601 (12%)
Query: 37 TRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
T +R H+ + Q+ + L +GV ++K+ +F+ N +W +AD +L
Sbjct: 26 TALRYFDHQHKLQDISWQSFRQQSEQLSRALLTLGVGIQDKIGIFAQNMPQWTIADIAIL 85
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
A+ V + ++ + +I NHSE L V N + ++ + II
Sbjct: 86 QIRAVTVPIFATNNETQTKYIINHSEMKVLFVGNQKEYDVALSIAPHCPKLEKII----- 140
Query: 157 KSSVAPDIVE--EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTS 214
++ P + E+ + D I G ES++ + + D+ T +YTS
Sbjct: 141 --AMQPLDLRGIEMGISWQDFIATAGDESQQQLAQRLAQK--------SMQDLFTLIYTS 190
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG-DKFLSMLPPWHVYERACGYFIFSRG-I 272
GTTG PKGVML ++NL HQ+ + + +G D LS LP H++ERA ++ S+G +
Sbjct: 191 GTTGEPKGVMLDYQNLAHQLATHQQTLMKIDGSDVSLSFLPLSHIFERAWVAYVLSQGAV 250
Query: 273 ELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
+ +++ L +P M +VP YE +Y+ + ++ + R+ + +RI
Sbjct: 251 NVYLDDPHKVREALSVVKPTLMCAVPRFYEKIYATVFDKVKQAPWLRQQIFYNALRIG-- 308
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
L QKQ L WL PLH LA+ LV+ K+Q +G
Sbjct: 309 ---------KLALRYQQKQQP----LPFWLK---------PLHQLADSLVFSKLQQVLGG 346
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ GG L I +F+ IGV +++GYG+TE++ ++ S+G + T
Sbjct: 347 RIRMMPCGGAKLEPEIGIFFHCIGVNIKLGYGMTETTATVSCWPDFGFESNSIGQIMPGT 406
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
+KI D NE+L V+G VM+GYFKNP T + EDG+L TGD G++
Sbjct: 407 TVKIGDE--NEIL---------VKGGGVMKGYFKNPEETAKCFTEDGFLKTGDAGYVDAE 455
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
G L + R KD + STG+ + P +E L+ LI QI VI ++
Sbjct: 456 ----------GNLFMTDRIKDLMKTSTGKYIAPQAVEGKLLQDKLIEQIAVIADARKYVS 505
Query: 572 AIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIG 623
A++VP + + AK+L+I + + +L K EK I+ L EL+ + F +
Sbjct: 506 ALVVPCFDTLEEYAKKLNIQYQNRLDLIKNAAIVEMFEKRINELQKELQGFEKIKKFTLL 565
Query: 624 P 624
P
Sbjct: 566 P 566
>gi|229821075|ref|YP_002882601.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
gi|229566988|gb|ACQ80839.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
Length = 608
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 250/533 (46%), Gaps = 82/533 (15%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+ E+ A+GL GV+P +++S+ + S W + D + A GA+ V SS+E+
Sbjct: 50 ATFADEVRALAKGLVAAGVEPGDRVSIMAHTSYAWTLLDFAIWAAGAVGVPVYETSSAEQ 109
Query: 114 LLHIYNHSESVALA-VENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+ I S V+LA VE+ E R E A++R + ++A +
Sbjct: 110 IAWICTDS-GVSLAFVEDAELAERTRE--ADVASIRAV-------HAIADGL-------- 151
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+ +++ GR D DA+ + + +DD+AT +YTSGTTG PKGV LTH N LH
Sbjct: 152 -ESLVEAGR-------DVEDAQIEARTAALRADDLATVIYTSGTTGRPKGVELTHGNFLH 203
Query: 233 QIR----SLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQ 287
+R SL ++ + + L +P HV+ R + S G+ R L DL
Sbjct: 204 LVRNGVASLGEVC-NQPCSRTLLFMPLAHVFARFIEVLCVTSAGVLGHSPGTRTLTQDLA 262
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+ P ++++VP V+E +Y+ +++ T R A + I+++
Sbjct: 263 SFSPTFLLAVPRVFEKVYNSAEQKAGTGVRLRLFRWSAKVAITYSRAG------------ 310
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
+ +PS +L H LA +LV+ K+++A+G + + VSGG L
Sbjct: 311 DSARPS---------------PVLRAQHALAGRLVHGKLRAAMGGALEYAVSGGAPLGQR 355
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ IGV V GYGLTES+ A RP +G+VG TEI I D
Sbjct: 356 LGHFFRGIGVTVLEGYGLTESTAPTAVNRPERIKIGTVGPAFPGTEIAIAD--------- 406
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G + VRG V +GY P AT +A DGW +TGD+G + G L +
Sbjct: 407 --DGEILVRGGHVFRGYRGAPDATAEAFTPDGWFHTGDLGTL----------DADGYLSI 454
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
GR K+ I+ + G+NV P LE+ L+ Q+VV+G + GA++ D +
Sbjct: 455 TGRRKEIIITAGGKNVAPAALEDRLRGHPLVSQVVVVGDQRPFIGALVTIDAD 507
>gi|108805260|ref|YP_645197.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766503|gb|ABG05385.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 612
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 259/538 (48%), Gaps = 67/538 (12%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
R+R F ++ + + DFA GL +GV+ ++++ S N W VAD +++ GA V
Sbjct: 48 RWREFSFREVYRRVEDFASGLAGLGVERGSRVAIMSANRVGWTVADVAIMSLGAATVPIF 107
Query: 107 SRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
++ HI S + + VE ++A S A++ ++ + ++S
Sbjct: 108 PTLGPRQVAHILEDSGARVVVVEGE---RQLAAVRGSGASVEHLVCM--DEASAGGG--- 159
Query: 167 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 226
V ++ E+ G SR D + ++ +D+AT +YTSGT+G KGV+LT
Sbjct: 160 ---VLAFSEVERRGARSR-------DPGWEARMLSLRREDVATLIYTSGTSGRQKGVILT 209
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI--FSRGIELMYTAVRNLKD 284
H NLL + ++ ++VP + D LS+LP HV ER C F+ G + +V +++
Sbjct: 210 HGNLLSNLEAIIEVVPITDDDVGLSILPLSHVLERTCSQFLNLVGGGTNYIAESVEKVQE 269
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
+L +P ++ VP ++E +++ I++Q T++ R + + +R + E
Sbjct: 270 NLLEVRPTALLVVPRLFERVFAVIREQ-GTANPVRARIFESAVRTARRKYRHDAGEEAMS 328
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
L R +L+ L+ L LVY+K+++ +G + VSGG L
Sbjct: 329 LARR---------------------LLFGLYDL---LVYRKVRAGLGGRVRFCVSGGARL 364
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ F+ GV V GYGLTE+SPVI+ R G+VG P+ + E+++
Sbjct: 365 EPWLGEFFYGAGVPVAEGYGLTETSPVISVNRFEDLRFGTVGPPLPNVEVRL-------- 416
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
+G + VRG V GY P A +DG+ TGDIG S GG
Sbjct: 417 ---SGEGEILVRGPSVTPGYHNLPEENAAAFTQDGFFRTGDIG----------SFDEGGR 463
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
L + RAKD +VL TG+NV P +E A ++ I Q +++G ++ A+IVPD E V
Sbjct: 464 LKITDRAKDIMVLDTGKNVAPQPVETALANTAHIAQAMLVGDGRKFVSALIVPDFEAV 521
>gi|383820039|ref|ZP_09975299.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
gi|383335859|gb|EID14280.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
Length = 599
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 252/536 (47%), Gaps = 73/536 (13%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V C+ EQ I A GL GV+P ++++L S W + D +LATGA+ V +
Sbjct: 46 VTCKQAAEQ-IRSAALGLIAKGVQPGDRVALLSATRYEWPILDLAILATGALTVPIYETN 104
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
S+E++ +SE+V + VE ++ A+R I+ + G +
Sbjct: 105 SAEQVRFTLANSEAVLIIVETDAHAAKVEPARDELPALREILRIEGSDTP---------- 154
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ D +I+ G+ A D + I + D AT +YTSGTTG PKGV LTH N
Sbjct: 155 --ALDALIEAGKSVDPAELDK-------RLAGIRASDPATLIYTSGTTGQPKGVQLTHSN 205
Query: 230 LLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 286
L+H+IR + PA G+K L LP HV RA F+ + L +T+ ++NL
Sbjct: 206 LVHEIRGDKECFPAMLAKGEKMLMFLPLAHVLARAITLAAFTYKVTLGFTSDIKNLVPTF 265
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
++P ++SVP V+E +Y+ +Q R+ A A A TA + +
Sbjct: 266 AVFKPTLVVSVPRVFEKVYN-TAEQNAEDGGKGRIFALA------AKTAIE-----WSQA 313
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
++ P L+ L H + +KLVY K+++A+G +A +SGG L
Sbjct: 314 QDAGGPGLLLRL---------------RHAVFDKLVYGKLRAALGGECRAAISGGAPLGA 358
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
+ FY +G+ + GYGLTE+S I R +GSVG + ++I D +E+L
Sbjct: 359 RLGHFYRGVGLTIYEGYGLTETSAAITVNRIGDLKIGSVGKLVPGNSMRIND--DDELL- 415
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
V+G V GY++N T A+ DGW +TGD+G I G L
Sbjct: 416 --------VKGGVVFAGYWRNEEET-NAVFSDGWFHTGDLGRIDED----------GFLT 456
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
+ GR K+ IV + G+NV P LE+ LI Q + +G + GA+I D E +
Sbjct: 457 IIGRKKEIIVTAGGKNVAPAILEDRLRAHPLISQAMAVGDGKPFIGALITIDPEAI 512
>gi|159900246|ref|YP_001546493.1| AMP-dependent synthetase/ligase [Herpetosiphon aurantiacus DSM 785]
gi|159893285|gb|ABX06365.1| AMP-dependent synthetase and ligase [Herpetosiphon aurantiacus DSM
785]
Length = 594
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 168/605 (27%), Positives = 289/605 (47%), Gaps = 77/605 (12%)
Query: 42 SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
+RRN + ++ ++ + G + +G++ +++ + S+ S W+ +D ++ +GA+
Sbjct: 25 TRRNGEWITCTNAEHQRHVYQLMAGFQQLGLQKGDRVGIMSNTSVDWVESDWALVCSGAV 84
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V ++ + I ++ L +EN E ++++ + + +I+ G+
Sbjct: 85 PVSIYPSLMADTVAFIAQDADLKFLLIENREQYDKLQKVRSQLEHIERVIIFDGR----- 139
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY---ETIGSDDIATYVYTSGTTG 218
D+ + P I+ L R A SD+ A++ + + I +D+AT VYTSGTTG
Sbjct: 140 -DLPSDDPW-----ILSLTSLRRMATSDAT-AQEVFATNCAQQIEPEDLATIVYTSGTTG 192
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER---ACGYFIFSRGIEL- 274
NPKG ML H+ LL ++ ++ + + GD + LP H++ R CG G+
Sbjct: 193 NPKGAMLAHRALLGELTAIRTTMAMQAGDDDVLFLPAAHIFGRLQHMCG---VDNGLNTA 249
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+ +++ + +D+Q +P + SVP +YE ++S Q + S +R+ A AL
Sbjct: 250 IIESIKQVLEDVQAIKPTFFFSVPRMYEKIFSTAQARAEASPIRKRIFAWAL-------- 301
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 393
A R ++R + Q + + A +A LA++LV+KK+++ +G +
Sbjct: 302 AIAR-----QMSRYKGQKAAVPAAFKLKYA------------LADRLVFKKVRALLGGNI 344
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
+ ++GG L + I F+ GV + G+GLTE+S + A RP LG+VG EI
Sbjct: 345 RYAITGGAPLDIEILEFFNGAGVLLLEGWGLTETSAAVTANRPDDYRLGTVGKVFPGNEI 404
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
KI D G V VRG+ ++ GY+ NP T +AL DGW +TGDIG I
Sbjct: 405 KIAD-----------DGEVLVRGNLILSGYYNNPQKTNEAL-IDGWFHTGDIGKI----- 447
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG-- 571
G L + R KD ++ ++G+N+ P +E A S I Q V G RRP
Sbjct: 448 -----DADGFLSIVDRKKDLLITASGKNIAPQAVEAAFKNSPYISQCAVFG--DRRPYLV 500
Query: 572 AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC-SF-QIGPIHVVD 629
A+ D E V A R V DA+ K ++ + E++ SF QI ++
Sbjct: 501 ALFTLDMEAVTAWANR-EHVPVDANLHKHPKLVAAIEHEVQTINPTLPSFEQIKAYEILP 559
Query: 630 EPFTV 634
E FT+
Sbjct: 560 EDFTI 564
>gi|409198272|ref|ZP_11226935.1| long-chain-fatty-acid-CoA ligase [Marinilabilia salmonicolor JCM
21150]
Length = 636
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 274/569 (48%), Gaps = 67/569 (11%)
Query: 47 RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRG 106
RF+ + + ++D A GL +G+K ++L+L S+ +WL+++ +L GAINV
Sbjct: 28 RFQPTTYKETKNLVMDLAAGLIELGIKKGDRLALLSEGRNQWLISELAILYCGAINVPLS 87
Query: 107 SR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV 165
++ + ++L+ HSES + V + +I E L + II+L + + +++
Sbjct: 88 AKLEADQDLIFRLEHSESRMIIVSRNQL-PKIREILQELTFLEKIIVLDDIEDTQEKELI 146
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
Y ++I G K F +++ + +DIA YTSGTT PKG+ML
Sbjct: 147 -------YSKLIKSG----KTFLETHRQEVEEIKNAVHFNDIANISYTSGTTAQPKGIML 195
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFS-RGIEL--------MY 276
+H+N + + + + L +LP H + + F +G +
Sbjct: 196 SHRNYTANVEQAFSFIDIPAHFRTLVVLPWDHAFAHTAALYAFMYKGASIASVETGRNQI 255
Query: 277 TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
++N +++ QPH ++SVP + + I+K I A++ V L + Y+ +
Sbjct: 256 ETLKNFSNNIMEIQPHVLMSVPAMAKNFRKNIEKGI----ASKGKVVSGLFNFAMNYSIW 311
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG 396
Y G + N K + + I PL+ L ++++++ I+ G +
Sbjct: 312 ---YNG---SGNDK-------------GKGLKKITAPLYKLFDRILFQTIRVRFGGNLQF 352
Query: 397 VSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
GGG+L + IDL F+ A+G + GYGL+E++P+I+A P + LGS G + + E+K
Sbjct: 353 FIGGGAL-LDIDLQRFFYALGTPMYQGYGLSEAAPIISANTPDHHKLGSSGPIVQNLEVK 411
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I D++ N LPAG+ G + V+G VM GY+KN AT + + DGWL TGD+G++
Sbjct: 412 ICDSDGN-TLPAGTSGEIVVKGENVMLGYWKNQEATNETII-DGWLFTGDLGYLDNQ--- 466
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAI 573
G L + GR K ++ S GE P +EEA + L+ Q V+ +
Sbjct: 467 -------GYLYVLGRFKSLLIGSDGEKYSPEGIEEAIIDHCPLVDQFVLHNNQNPYTIGL 519
Query: 574 IVPDKEEVLMAAKRLSIVHADASELSKEK 602
IVP E+V +K L E+S+E+
Sbjct: 520 IVPSSEKVNQLSKEL------GDEMSQEE 542
>gi|378824089|ref|ZP_09846634.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378597083|gb|EHY30426.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 608
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 272/602 (45%), Gaps = 64/602 (10%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
R +R+ +++ + +L + +G+K E++++ N + AD LA G
Sbjct: 33 FDRAGNRWVSHTYAEVAERVLAWRRAYAALGLKRGERVAMLLPNGTDHVYADLAALANGL 92
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
I V + + I S + L + + +I T + +++ ++
Sbjct: 93 IPVPLHAIDTPGASAFIMADSGARILVTNKLQRWTQIRATGTELPGLEHVVV-----TTE 147
Query: 161 AP--DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
AP D ++ + ++ +G +S A +D+A VYTSGTTG
Sbjct: 148 APEADDAASPRIWGAEALLAMG----AGYSGELPAGP-------APEDLAGIVYTSGTTG 196
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT 277
PKGVMLTH N + ++ + V G+ FLS LP H +ER GY++ + G + Y
Sbjct: 197 RPKGVMLTHANFVANVKDTLECVSPRAGEVFLSFLPLSHTFERMAGYYLALATGCTIAYN 256
Query: 278 -AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS-AARRVVARALIRISFAYTA 335
+V L +DL+ +P +ISVP VYE +++ +Q+++ SS +ARR+ A +R+ +A
Sbjct: 257 RSVLLLAEDLKTIRPQVIISVPRVYERIHARVQEKLKKSSPSARRLFGEA-VRVGWA--- 312
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA 395
FC +N +P A W +I A L P ++ Q G +
Sbjct: 313 ------DFC-EKNGIRPE---ADAHRWWDGLIRAFLLP------RVRETLAQQFGGRLRV 356
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
+SGG ++ + + +G+ + GYG+TE+SP+IA N +VGHP H E+++
Sbjct: 357 AISGGAAVNPKVARTFCGLGLPIIQGYGMTETSPIIAGNNLELNHPDTVGHPFQHVEVRL 416
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
G ++VRG VM+GY+ P T A DGWL TGDIG P
Sbjct: 417 -----------GEGDEIEVRGPSVMKGYWGRPEDTAAAFTPDGWLKTGDIGEWTPE---- 461
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G+L ++GR K+ IV STGE + P +LE A L Q V+G+++ G + V
Sbjct: 462 ------GMLRIKGRIKEIIVTSTGEKIPPADLESAIETDPLFAQTWVVGENRPYLGLVCV 515
Query: 576 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVV--DEPFT 633
+K E + D + LS + S + + P VV EP+T
Sbjct: 516 LEKNEWAALCAEEGLDPEDPASLSAARAKSSVLKRAKTAAGDFPHYALPRAVVLTQEPWT 575
Query: 634 VN 635
+
Sbjct: 576 IE 577
>gi|319949400|ref|ZP_08023465.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
gi|319436930|gb|EFV91985.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
Length = 602
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 249/549 (45%), Gaps = 83/549 (15%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
+ R+R ++L + + A GL GV+P ++++L + W++ D + GAI V
Sbjct: 40 DGRWRSVSNAELVERVDRIAAGLIAAGVEPGDRVALMAGTRLEWVLVDLAVWTAGAITVP 99
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
SS+ +L I S + L EN E + +T R + L
Sbjct: 100 IYPSSSAGQLEWILADSAAKVLVAENDEHVVVVGDTTVPDTCTRILYL------------ 147
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARK-HYKYETIGSDDIATYVYTSGTTGNPKGV 223
D G E+ +A +S +A T+ D A+ +YTSGTTG PKG
Sbjct: 148 ------------DDGGLEALEADGESVEAETLDAAVATLELDTPASIIYTSGTTGRPKGC 195
Query: 224 MLTHKNLLHQIRSLYD---IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
+TH+NLL + +L D A+ G K L LP HV RA Y ++ + A
Sbjct: 196 AITHRNLLSECHALLDHPIGSMAQQGKKVLMFLPLAHVLARAVTYTVY------LGDATV 249
Query: 281 NLKDD-------LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 333
DD ++PH ++ VP V+E + GI T +AA+ V R + + A
Sbjct: 250 GFWDDTSTILPRFADFRPHMILGVPRVFEKVRDGIA----TKAAAKGAVQRRIFERAEAV 305
Query: 334 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-I 392
G + ++PS L A AR L LVY+ I++A+G
Sbjct: 306 AIEDSRLRGNDGLDDARRPSLLHA------ARYKALDL---------LVYRAIRAALGGR 350
Query: 393 SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 452
+ +SGGG+LP I F+ GV V GYGLTES+ P C +G+VG P+ T
Sbjct: 351 CEYAISGGGALPDRISHFFRGAGVPVYEGYGLTESTAAATVNGPGCQRIGTVGRPVAGTS 410
Query: 453 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
++I D+ G V++ G + Y+ N AT +A+ DGW TGD+G + P
Sbjct: 411 VRIADS-----------GEVELAGELIFDRYWNNEEATAEAV-RDGWFATGDLGALDPD- 457
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
G L + GRAK+ IV + G+NV P ++E+A L+ V+IG+ ++ A
Sbjct: 458 ---------GYLTITGRAKEIIVTAGGKNVSPGQIEDAIRAHRLVGHAVLIGEARKFVSA 508
Query: 573 IIVPDKEEV 581
+I D++E+
Sbjct: 509 LITVDEDEL 517
>gi|332291599|ref|YP_004430208.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
gi|332169685|gb|AEE18940.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
Length = 598
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 160/574 (27%), Positives = 273/574 (47%), Gaps = 76/574 (13%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
IS +N +RV + A+GL GV+ + +++F++N W++AD +++ A
Sbjct: 36 ISWKNMYYRV----------ENLAKGLLQFGVETQHNVAIFAENMPNWIIADLAIMSIRA 85
Query: 101 INVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV 160
+ V + S++E+ ++ N +E L V N +++ E L S + ++ I+ L
Sbjct: 86 VTVPIYATCSTKEVDYVINDAEVSLLFVGNQHEYDQAYELLESSSYLKLIVAL------- 138
Query: 161 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHY--KYETIGSDDIATYVYTSGTTG 218
D ++ P S + E A S + + Y + + + D+A+ +YTSGTTG
Sbjct: 139 -TDTIKLQPSVS-----SMYLEDFVATSPTQEIEDIYLKRQQDLDVKDLASIIYTSGTTG 192
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
PKGVM+ H N+ + + + + D LS LP H++ER+ +F GIE+ +
Sbjct: 193 EPKGVMIGHANIGASLAAHKYELDISDQDVSLSFLPLSHIFERSWVFFCLHMGIEVYFNQ 252
Query: 279 -VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR-ALIRISFAYTAF 336
+ + + L+ +P M +VP ++E +Y+ IQ + ++ ++ +A AL Y
Sbjct: 253 DPKKIAEVLKEVRPTVMCTVPRIFEKIYAAIQAKTKEATPTKQKLASWALSVGDNYYNQH 312
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG 396
+R+ + L N K + +A+K+V K+++ G
Sbjct: 313 QRLEKKVPLGLNLK------------------------YKIADKIVLSKLRALFGGRIKF 348
Query: 397 VSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+ GG+ P+ D+ F+ + G+ V+ GYGLTE++ ++ T S G I TEIK
Sbjct: 349 MPCGGA-PLAADMVSFFHSFGLDVKCGYGLTETTATVSLFGYTNFEFNSAGKSIEGTEIK 407
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I D +E+L V+G VMQGY+K P AT Q +DGW TGD G + H
Sbjct: 408 IGD--NDEIL---------VKGPGVMQGYYKKPEATAQVF-KDGWFCTGDAGRLDEH--- 452
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L + R KD + S G+ + P +LE A + SLI Q+ VIG Q+ A+
Sbjct: 453 -------GNLYITDRIKDLMKTSGGKYIAPQKLETALISDSLIEQLAVIGDQQKYVTALA 505
Query: 575 VPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
VP+ E + A +I EL K+ + L+
Sbjct: 506 VPNFENLKKYANEHNISFESMEELIKDNKVVALF 539
>gi|406910414|gb|EKD50442.1| hypothetical protein ACD_62C00542G0002 [uncultured bacterium]
Length = 595
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 254/549 (46%), Gaps = 63/549 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+++ ++ A GLR G++ +++++ S W +AD G++A + V ++S +
Sbjct: 37 SEVKDRVMKIAGGLRQRGIQKGDRVAIISKTRHEWTLADLGIMAASGVTVPIYESNTSTQ 96
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I +S++ + VEN +I S + I+ + SS + S
Sbjct: 97 AAYILENSQAKIVIVENEGQLQKILPVKNSLPHLTHIVHIDNITSSPTDRLC------SL 150
Query: 174 DEIIDLGRESRKAFSDSNDARKHYK--YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
D++++ SD + + Y ++ D A++VYTSGTTG PKG +LTH N +
Sbjct: 151 DDVMN---------SDLTEVQFVYDEALASLNLDHDASFVYTSGTTGEPKGAILTHGNFV 201
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 290
+ + I P L LP H+ R +F G Y ++ L D++ +
Sbjct: 202 AEAKGALAICPIGEDFTGLLFLPLAHILGRVTQFFHIHVGHTQCYAESIDRLIDNIATVK 261
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PH+M+SVP ++E +++ + + S ++ + R ++I + +R+ K
Sbjct: 262 PHFMVSVPRIFEKIHARTLQNVENSPPLKQHIFRWALKIGEQRS--QRLL--------TK 311
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
QP +C L + LA LV+KK+ +G + +SGG L + L
Sbjct: 312 QP------------LPVCMKLK--YFLAHHLVFKKLHDKMGGRIRFFISGGAPLSADLAL 357
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ A G + GYGLTE++ ++ R G+VG PI E +
Sbjct: 358 FFHAFGFTILEGYGLTETTAGLSFNRSHFIKFGTVGQPI----------EDAVAVKIAGD 407
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G + VRG V +GYF NP AT++A+DE+GW +TGDIG G L + R
Sbjct: 408 GEICVRGKIVFKGYFNNPQATREAIDEEGWFHTGDIGEF----------DTDGFLKITDR 457
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD IV + G+N+ P +E + I Q +V G ++ A++V D+++VL AK
Sbjct: 458 KKDIIVTAGGKNIAPQSIENHMITDPFISQFIVHGDKRKFLSALVVLDRDQVLRFAKEHD 517
Query: 590 IVHADASEL 598
I A EL
Sbjct: 518 IPFASYEEL 526
>gi|302879073|ref|YP_003847637.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
gi|302581862|gb|ADL55873.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
Length = 595
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 241/525 (45%), Gaps = 70/525 (13%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
N+ ++ +++ E+ + L + ++ +++++ N W+ DQ L+ G + V
Sbjct: 35 NNAWQELSWQQMQSEVARWQTALSYLNLQRGDRVAIMLRNCPAWIAFDQAALSLGLVTVP 94
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
+ + L +I N S + L E+ E W +V +
Sbjct: 95 LYTVDRPDNLAYIVNDSGAKVLLFESAE--------------------QWLGLRTVREQL 134
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDS-NDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
+ + S D + DL + + + + D++A+ +YTSGTTG P+GV
Sbjct: 135 QDVVRFVSLDSLPDLDEARLISMAKFLPETAQLLPAAVCRMDELASIIYTSGTTGKPRGV 194
Query: 224 MLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRN 281
ML+H N+L R+ D + D FLS LP H +ER GY+ + + +++
Sbjct: 195 MLSHGNMLSNARACLDTFSVRSEDVFLSFLPLSHTFERTLGYYLTVMTGATVAFARSIQT 254
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
L +D+Q +P +ISVP +YE +Y+ I+ ++ +R + + +A ++
Sbjct: 255 LSEDMQVIRPTLLISVPRIYERIYAVIRAKLEDGPRFKRRLFYLAVETGWAMFEHQQ--- 311
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 400
R + S+L LWP + +KLV +K+ +G + +SGG
Sbjct: 312 ----GRGPWRASFL---------------LWP---VLQKLVAQKVLDKLGGRLRVAISGG 349
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
+L + +G+ + GYGLTE+SPVI+ N SVG PI+ E+++
Sbjct: 350 AALAAEFSRVFVGLGLPIVQGYGLTETSPVISGNHLGNNFPDSVGQPISGVEVRL----- 404
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
G+ ++VRG VM GY+ NP AT+ L DGWL TGDIG I+
Sbjct: 405 ------GALSELQVRGPNVMLGYWNNPEATRATLAADGWLRTGDIGHISDT--------- 449
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G + + GR K+ IV+S GE + P ++E A L L Q++V G+
Sbjct: 450 -GHIYITGRIKEIIVMSNGEKIPPTDMELAILHDPLFEQVMVFGE 493
>gi|291614318|ref|YP_003524475.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
gi|291584430|gb|ADE12088.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
Length = 602
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 243/531 (45%), Gaps = 84/531 (15%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G+ +++++ N +W++ DQ ++ G I V + ++ + +I N ++ L E
Sbjct: 68 GLVKGDRVAIMLRNCPQWVMFDQAAMSLGLITVPLYTVDRADNIAYIVNDAQVKVLLFET 127
Query: 131 PEFFNRIAETLCSKAAM-RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSD 189
+ ++ + + RF+ L D +P Y + L D
Sbjct: 128 EAQWQELSGVVGQMGCVQRFVSL-----DDFRNDEPRLVPAAKY-LLTQLAELQAPVPCD 181
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 249
+ +A+ +YTSGTTG PKGVML+H N+L D
Sbjct: 182 CKE--------------LASIIYTSGTTGRPKGVMLSHNNMLSNTYDAMATFMVRGDDLL 227
Query: 250 LSMLPPWHVYERACGYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
LS LP H +ER CGY++ ++R I L L +DL+ +P +ISVP +
Sbjct: 228 LSFLPLSHTFERTCGYYLQVMTAATVAYARSIPL-------LSEDLKTIKPTILISVPRI 280
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE +Y I ++ A +R++ + + +A ++ G+ +PS+L
Sbjct: 281 YERIYGAISTKLAEGPAFKRMLFHLAVEVGWARFLHQQRRGGW-------KPSFL----- 328
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
LWP L +KLV +KI +G + VSGG +L I + +G+ V
Sbjct: 329 ----------LWP---LLDKLVAQKILERLGGRLRTTVSGGAALAPEISRVFVGLGLPVV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYGLTE+SP+++ + N SVG PI ++K+ G + + V+G V
Sbjct: 376 QGYGLTETSPIVSGNKLDNNFPDSVGQPIRGVQVKL-----------GEQHALLVKGPNV 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M GY+ NP AT+ +D DGWLNTGDI I+ G + + GR K+ IVLS G
Sbjct: 425 MMGYWNNPEATRAMIDADGWLNTGDIAHISET----------GHIYITGRLKEIIVLSNG 474
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
E + P ++E A L LI Q+++ G+ + A+ V + E L A ++ +
Sbjct: 475 EKMPPADMEAAILHDPLIDQVMIYGEGRPYLIALAVLNPEVWLQVAAKVGV 525
>gi|407783917|ref|ZP_11131108.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
gi|407199170|gb|EKE69192.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
Length = 602
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 279/602 (46%), Gaps = 70/602 (11%)
Query: 42 SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
++R+ ++ ++++++ + LR G++P +++ + S+N W +AD ++A GA+
Sbjct: 31 AKRDGTYQPMSWREIDRQVRALSRALRAQGIQPGDRVVIVSENRPEWAIADLAIMAAGAV 90
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
+V ++ + ++I + + L + + F+I L GK
Sbjct: 91 SVPAYVTNTVADHIYILENCGAKGLICSTEKLLRNALPAAIHSSHCEFVIALEGK----G 146
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
P I +D+ + G R+ DD+A +YTSGT G PK
Sbjct: 147 PAQECTIRFQDWDDALKAGAAMPDDVEQVAGQRRR--------DDLACLIYTSGTGGAPK 198
Query: 222 GVMLTHKNLLHQIRSLYDIVPAEN-GDK-FLSMLPPWHVYERACG-YFIFSRGIELMYT- 277
GVML+H+ + + S +D++ GD+ FLS LP H YE CG +F S G ++ Y
Sbjct: 199 GVMLSHRAIFCNLVSAFDLLHEFGLGDEVFLSFLPLSHSYEHTCGLFFPISIGAQIYYAE 258
Query: 278 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
L +LQ +P M +VP +YE L+ I + + +R + + + K
Sbjct: 259 GADTLAANLQEAKPTIMTAVPRLYEVLHGRILAGVERAGGKKRDLFMKALEL-----GRK 313
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
RI + L+ +K +LL + LV +K++ +G KA
Sbjct: 314 RIEQPGSLSLGEKA----------------------FNLLLDLLVRRKVRQRMGGRLKAF 351
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
+SGG L + +F+ A+G+++ GYG TE++PV++ RP + +VG P+ E+++
Sbjct: 352 ISGGAPLNYEVGMFFLALGIRLCQGYGQTEAAPVVSCNRPRRIRIETVGPPLKGVEVRL- 410
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
A E+L VRG +M GY+ +P AT++AL DGWL+TGDIG I P
Sbjct: 411 -APDGEIL---------VRGELLMDGYWDDPEATEKAL-IDGWLHTGDIGEIDPD----- 454
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
G + + R +D IV+S G+N+ P +E I Q +V G + +IVP
Sbjct: 455 -----GYIRITDRKRDIIVISGGDNISPQRVEGFVTLQPEINQAMVYGDKRPYLVGLIVP 509
Query: 577 DKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH---VVDEPFT 633
++ V AK V + +EL+ +K GE+ ++ + + + EPFT
Sbjct: 510 AQDFVESYAKGKG-VAPNLAELAGDKDFRAAIGEVLDRVNRDLSSLEKVRRFVIATEPFT 568
Query: 634 VN 635
+
Sbjct: 569 TD 570
>gi|394990014|ref|ZP_10382846.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
gi|393790279|dbj|GAB72485.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
Length = 554
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 244/524 (46%), Gaps = 80/524 (15%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
++ +R F ++ + + R +P ++++L NS W+ DQ L G + V
Sbjct: 25 DNTWRDFSAHEVMALAARWQQSFRAADYEPGDRIALCLKNSVNWVAIDQAALGLGLVVVP 84
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
+ + E L S + L +EN + + + + + II L G + A
Sbjct: 85 LYADDNPENLAWCLADSGARLLVLENTRLLDALIRAMPT---LPTIICLHGDVPAPAIPA 141
Query: 165 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+P E+ AF K + + + +AT VYTSGTTG PKGVM
Sbjct: 142 CRWLP------------ENGSAF----------KVQDLDENLLATLVYTSGTTGRPKGVM 179
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNL 282
L+H+N+L + + ++V GD +S+LP H++ER CGY++ G+ + Y ++ L
Sbjct: 180 LSHRNILSNVAAALEVVSLHPGDLLISVLPLSHMFERTCGYYVPLKAGVPVAYARSINQL 239
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
+DL +P M++VP V++ + I+ Q T+S +R + + ++ + F+R
Sbjct: 240 AEDLAFLKPTVMVAVPRVFQRFLARIE-QALTASPLKRALFS--LTVALGWRKFER---- 292
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 401
R+ K L L+ + LV + + +G + V GG
Sbjct: 293 ----RSGKVEQALFQLL-------------------QPLVAGPVLNRLGGRMRLAVVGGA 329
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
L + + + +G+ + GYGLTE+SP++A R N +VG P+ E+++ D
Sbjct: 330 PLELRVAQSFIGLGLNMLQGYGLTEASPIVAGNREYDNDPITVGAPLPGVEVRVNDV--- 386
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
G + VRG VM GY+ NP A+ + LD DGWLNTGD+ I
Sbjct: 387 --------GELLVRGPSVMLGYWHNPEASAEVLDADGWLNTGDLVEIPADK--------- 429
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
++++GR KD +VLS GE V P + E A L L Q++++G+
Sbjct: 430 --IIIKGRTKDILVLSNGEKVSPQDAEMAILDDPLFEQVMLVGE 471
>gi|448599433|ref|ZP_21655337.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
gi|445736894|gb|ELZ88434.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
Length = 666
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 244/534 (45%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS + ++ +
Sbjct: 77 LAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQTQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS-YDEIIDLGR 181
+ A+ VEN R+ + + +RFI+ +V+E ++++ LG
Sbjct: 137 ADAVVVENEALLERVL-AVEDELDLRFIV------------VVDEYDGHDDREDVLTLGE 183
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-I 240
R ++A + +D+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRCGEEAYDEAAYESWLDERDPEDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRF 243
Query: 241 VP-AENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRY 289
P + GD LS LP HV+ER G+F+ + + L++D Q
Sbjct: 244 GPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 304 RPTVGTSVPRVYEKLYDAIRAQASESPAKKRVFEWA-VGVGQAY-------------HTT 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 350 DAPGYL---------------LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+ + L
Sbjct: 395 ALYHAMGLPIYEGYGLTETSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRG V +GY+ +P T+ A ED W TGD+ RR G
Sbjct: 455 GEVGELLVRGPSVTEGYWNDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDG 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|433429134|ref|ZP_20407305.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
gi|432195189|gb|ELK51743.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
Length = 666
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 244/534 (45%), Gaps = 72/534 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A G R +G++ +++ + S W D +L G + + SS + ++ +
Sbjct: 77 LAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQTQYLLSDPG 136
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS-YDEIIDLGR 181
+ A+ VEN R+ + + +RFI+ +V+E ++++ LG
Sbjct: 137 ADAVVVENEALLERVL-AVEDELDLRFIV------------VVDEYDGHDDREDVLTLGE 183
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-I 240
R ++A + +D+A+ +YTSGTTG PKGV LTH N + Y
Sbjct: 184 LYRCGEEAYDEAAYESWLDERDPEDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRF 243
Query: 241 VP-AENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRY 289
P + GD LS LP HV+ER G+F+ + + L++D Q
Sbjct: 244 GPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLV 303
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 304 RPTVGTSVPRVYEKLYDAIRAQASESPAKKRVFEWA-VGVGQAY-------------HTT 349
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P YL L H LA++LV+ +++ A+G + +SGGGSL +
Sbjct: 350 DAPGYL---------------LTAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELC 394
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PA 466
Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+ + L
Sbjct: 395 ALYHAMGLPIYEGYGLTETSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGDAG 454
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGG 522
G G + VRG V +GY+ +P T+ A ED W TGD+ RR G
Sbjct: 455 GEVGELLVRGPSVTEGYWNDPEETEAAFVEDDEGRRWFRTGDV----------VERRPDG 504
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+ RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 505 YIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|220936214|ref|YP_002515113.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997524|gb|ACL74126.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 605
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 170/588 (28%), Positives = 273/588 (46%), Gaps = 69/588 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S++ E+ + + + G+KP +++++ N W+V DQ L G I V + E
Sbjct: 49 SEVATEVGRWQQAMLKEGLKPGDRVAIMLRNCREWVVFDQACLGLGLITVPLYTDDRPEN 108
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I ++ + VE + +I E +R II + +++ PD + P
Sbjct: 109 IAYIVREADVKLMVVEGRLQWKKILEVRDRLEGLRRIISV----NTIEPDDKPDDP--RL 162
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
D + D F + + H + D++AT VYTSGTTG PKGVML+H+N+L
Sbjct: 163 DSLSDW------LFGLKGELQAH----ALEPDELATIVYTSGTTGKPKGVMLSHRNILFN 212
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQP 291
+ D FLS LP H ER GY++ G + Y +++ L DDL +P
Sbjct: 213 AHASSRCADLNEQDLFLSFLPLSHTLERTAGYYMPMMVGAAVAYARSIQTLADDLATVRP 272
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+ISVP +YE +Y I + S ++AR L ++ ++R +Q +
Sbjct: 273 TVLISVPRIYERVYGRINAGLKEKS----LLARKLF-MTTVDVGWRR------FEHSQGR 321
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFY 411
W + L+A K++ + G + V GG LP I F+
Sbjct: 322 AG---------WHPKLLLWPLLEKLVASKVLAR----LGGRLRYAVCGGAPLPPPIARFF 368
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+G+ V GYG+TESSPV++ RP NV S+G P+ E+KI G K
Sbjct: 369 IGLGLPVFHGYGMTESSPVVSVNRPDDNVPASIGKPLPGVEVKI-----------GDKDE 417
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
+ R VM GY+ N AT+ +D +GWL++GD + R G L + GR K
Sbjct: 418 LLTRSPSVMLGYWNNEEATRATIDSEGWLHSGD---------KARMDETGH-LYITGRIK 467
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ IVL GE V P ++E A L Q++VIG+ + AI+V + EE AK L +
Sbjct: 468 EIIVLGNGEKVPPADMEMAIALDPLFDQVMVIGEGRPALAAIVVLNPEEWAALAKELDLD 527
Query: 592 HADASELSK---EKTI-SLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
++L+ EKT+ + + +L ++ Q+ + V EP+TV+
Sbjct: 528 PESEADLNGRFLEKTLRTRIARQLHEFPGYA--QVRKLIVTLEPWTVD 573
>gi|390951964|ref|YP_006415723.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
gi|390428533|gb|AFL75598.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
Length = 605
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 160/547 (29%), Positives = 257/547 (46%), Gaps = 66/547 (12%)
Query: 37 TRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
T R R +R + Q + + L ++ +++++ N W++ DQ
Sbjct: 32 TAYRFFERADGWRDLTWRDMGQWVARWRRALAGESLESGDRVAVLLRNCPEWVMFDQAAF 91
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKA-AMRFIILLWG 155
+ G + V + +E +I + + L +++ + R+AE + +R +IL
Sbjct: 92 SLGLVTVPLYTDDRAENAAYILQDAAAKLLLIQDAGRWKRLAEVIGDAPWPLRVVIL--- 148
Query: 156 KKSSVAPDIVEEIP-VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTS 214
+ S A ++ P V D + S A + + +AT VYTS
Sbjct: 149 EPSDAATELAAHDPRVVVADTWL----------PSSAPALTQRDGDPLA---LATIVYTS 195
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGI 272
GTTG PKGVML+H+N+L + + ++ D FLS LP H+ ER GY+ I +
Sbjct: 196 GTTGRPKGVMLSHRNILTNVHGVVTLINVYPEDLFLSFLPLSHMLERTGGYYLPIMAGSC 255
Query: 273 ELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
+V L +DLQ +P MI+VP V+E +Y +Q Q+ + A R + R + ++
Sbjct: 256 VAFARSVGQLAEDLQSIRPTVMIAVPRVFERVYQRLQDQLLSRPAPVRWLFR--LAVATG 313
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+ AF R +G R P L L WL R+ A+L EKL G
Sbjct: 314 WRAFLR-EQG----RGGWHPRLL--LWPWLRRRVGAAVL-------EKLG--------GR 351
Query: 393 SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 452
+ VSGG +LP + + +G+ + GYGLTE+SPV++ NV SVG PI +
Sbjct: 352 MRVAVSGGAALPAGVAHTFIGLGLPLIQGYGLTETSPVVSFNPLRKNVPESVGVPIRGIQ 411
Query: 453 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
++I G+ + V+G VMQGY+ N +AT + L +DGWL+TGD
Sbjct: 412 VRI-----------GADDELMVKGDNVMQGYWNNHAATAKVLTQDGWLHTGD-------- 452
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
++R G + + GR KD +VLS GE V P +LE A + L Q++V+G+ A
Sbjct: 453 ---QARIEDGHIYITGRIKDILVLSNGEKVPPADLEMAIVMDPLFDQVLVLGERHSYLSA 509
Query: 573 IIVPDKE 579
++V + E
Sbjct: 510 LLVLNAE 516
>gi|225352623|ref|ZP_03743646.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156817|gb|EEG70211.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 607
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 161/599 (26%), Positives = 281/599 (46%), Gaps = 87/599 (14%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +L A+GL G+ + +++FS W V D + A GA+NV S+ +
Sbjct: 54 EFHNAVLAAAKGLIAFGINKGDAVTIFSTTRYEWGVLDFALAAIGAVNVPIYDTDSAAQA 113
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
I N S+ +N E F+R+ + +++ I++L S A +E + V D
Sbjct: 114 ERILNDSDVKLAIADNRERFDRLDSVIDRCPSLKHILML----DSNAMGALEGLGVTVSD 169
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E ++ + +++ +DD+AT VYTSG+TG PKG L+H+N +
Sbjct: 170 EELEA------------------RIDSVHADDLATIVYTSGSTGAPKGAELSHRNFISIT 211
Query: 235 RS----LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQR 288
R+ L++IV E+ + L LP H + R Y + G+ + L DL+
Sbjct: 212 RAGSLALHEIV-LEDHPRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRS 270
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
++P Y++ VP V+E +Y+ ++ T R ++ + A + R+ +
Sbjct: 271 FEPTYLLGVPRVFEKVYNAASRKAGTGWKGR-----LFLKAAEAARDWSRMQQA------ 319
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 408
++P+ A+ I HL E VY+ ++SA+G V+ GG+ P+ +
Sbjct: 320 GERPT----------AKQIAQ-----HLSYEASVYRTVRSALGPRIRYVACGGA-PLDVS 363
Query: 409 L--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
L F+ IG+ + GYG+TE++ AA R T NV+G+VG P + ++I D
Sbjct: 364 LAHFFNGIGLPMIQGYGMTETAAPFAATRVTDNVIGTVGQPAPGSSVRISD--------- 414
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G ++V+G V +GY P T +A EDGWL TGD+ I GR + +
Sbjct: 415 --DGELQVKGPNVFRGYHNLPEKTAEAFTEDGWLKTGDLASI---DDEGR-------ITI 462
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR KD I+ + G+NV P+ +E+ ++ ++ +VV+G ++ GA+I D E + A
Sbjct: 463 TGRKKDIIITAGGKNVSPIPMEQEIVKCPIVEHVVVVGDNRPFIGALITLDPEG--LEAW 520
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 639
SI + + L + + ++ E++K+ K + + V+D FT CL
Sbjct: 521 LPSIGLSADTPLDRVAATAAVHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|379710628|ref|YP_005265833.1| long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
gi|374848127|emb|CCF65199.1| Long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
Length = 598
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 249/540 (46%), Gaps = 82/540 (15%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
R ++ + + A+G+ G++ +++++ S W V D + A GA V
Sbjct: 45 LRDVTATEFAKTVTGVAKGIIATGIELGDRVAIMSATRYEWAVLDFAIWAAGACTVAIYD 104
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE- 166
S++E+ I S + L VEN + + E +S P++ E
Sbjct: 105 SSAAEQAKWILQDSATKLLIVENDKHRATVDEI----------------ESGSLPELKEI 148
Query: 167 -EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
+I + DE+I G +D +D H + +G+ AT +YTSGTTG PKGVML
Sbjct: 149 AQIDKGAIDELISRG-------ADLDDQVVHERRAQVGASSPATLIYTSGTTGRPKGVML 201
Query: 226 THKNLLHQIRS----LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-R 280
TH NL + +S L + G K L LP HV+ RA F + + +T+
Sbjct: 202 THANLWAESKSDRIALGKFIV--EGKKTLLFLPLAHVFARAVALAAFDAKVIVAHTSDWT 259
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
L D ++PH+++SVP V+E +++ +++ + A I+++
Sbjct: 260 TLVDQFAEFKPHFILSVPRVFEKVFNSAKQKAHDGGKGKIFDLAAETAIAYS-------- 311
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
EG K + LV I H + +KLVY K++ A+G +A VSG
Sbjct: 312 EGL-----DKGGADLVTKIK--------------HFVFDKLVYSKLRVALGGQCEAAVSG 352
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
GG L + F+ +GV + GYGLTE++ I P +GSVG PI KI AE
Sbjct: 353 GGPLGARLGHFFRGVGVTIFEGYGLTETTAAITVNTPEHIRVGSVGRPIEGHAAKI--AE 410
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
E+L ++GS V GY+ N AT++A EDGW TGD+G I
Sbjct: 411 DGELL---------LKGSVVFDGYWGNAEATEEAF-EDGWFKTGDLGAI----------D 450
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G + + GR K+ IV + G+NV P LE++ LI Q++V+G Q GA+I D E
Sbjct: 451 ADGFVTITGRKKEIIVTAGGKNVSPALLEDSLRAHPLISQVMVVGDGQPFVGALITLDPE 510
>gi|397671022|ref|YP_006512557.1| AMP-binding protein [Propionibacterium propionicum F0230a]
gi|395140893|gb|AFN45000.1| AMP-binding enzyme [Propionibacterium propionicum F0230a]
Length = 595
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 160/542 (29%), Positives = 247/542 (45%), Gaps = 78/542 (14%)
Query: 33 DAVATRIRISRR--NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLV 90
D ATRIR+ H FR F E I + A+GL G++P +++ LF++N W
Sbjct: 18 DRPATRIRVGDDWCTHTFREFGE-----RIDEAAQGLLNRGIRPGDRIGLFANNCPEWSE 72
Query: 91 ADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFI 150
D G AI V + S+ E++ HI S L V R+ E + +
Sbjct: 73 IDFGAATVRAIPVPIYATSTPEQIRHIAADSGLRILFVSGRSECERVLEVADDLPELEHV 132
Query: 151 ILL--WGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARK-HYKYETIGSDDI 207
++L W ++E V +YD+ F +AR + G DD+
Sbjct: 133 VILEPW-------EGMLER--VITYDD-----------FRAEPEARALEARLAEAGPDDL 172
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
A+ +YTSGTTG+PKGVML H ++ Q ++ ++ D L LP H ERA I
Sbjct: 173 ASIIYTSGTTGDPKGVMLRHSAMIAQKEAIEEMFHFGPEDHSLCFLPLSHALERAWTSII 232
Query: 268 FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
+G Y R + D L + +P ++SVP +YE +++ ++ S R + AL
Sbjct: 233 LLKGCMNTYVPDARTVADALVQTKPTLLVSVPKLYEKVFATAHAKVAASGIKRGIFKWAL 292
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
R+ +R Y R ++P+ W W + +A++LV I
Sbjct: 293 -RVG---ARNQRAY------RKGRRPA-------WFWRAQLG--------MADRLVLSSI 327
Query: 387 QSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
+ A+G +KA ++ GG L I+ F+ A+G+ + GYGLTE+SP++ P +G+ G
Sbjct: 328 RVALGGNKAVLACGGAPLRKEIEEFFSAVGMPIYTGYGLTEASPLVTFNSPGGFKIGTAG 387
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
+ ++ I G G V RG VM GY+ N AT A+D DGWL+TGD
Sbjct: 388 RVLKGGQLHI-----------GEHGEVLFRGPNVMAGYWNNEEATAAAIDSDGWLHTGDA 436
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G++ G LV+ R KD IV G+NV P +E L L V++G
Sbjct: 437 GYV----------DVDGFLVITDRIKDIIVTLGGKNVAPQPIEGLILADPLFEHAVLLGD 486
Query: 566 DQ 567
++
Sbjct: 487 NR 488
>gi|406883851|gb|EKD31364.1| hypothetical protein ACD_77C00342G0004 [uncultured bacterium]
Length = 624
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 157/570 (27%), Positives = 278/570 (48%), Gaps = 67/570 (11%)
Query: 41 ISRRNHRFR--VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT 98
+ +R+ F+ + E+KL + F GL IG + + S+ S+ W++ + +
Sbjct: 31 LEKRDGAFKPTTYSETKLIAQ--QFGAGLCSIGFRRKSNASILSEGRNLWIIGELAIFYA 88
Query: 99 GAINVVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKK 157
G +NV + S +LL H+E V L + + +I S ++ I++L
Sbjct: 89 GGVNVPLSIKLEESSDLLFRLIHAE-VELIIVSERQLPKIRSIKNSLPLLKHIVIL---- 143
Query: 158 SSVAPDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGT 216
D++E E+ V D++I++G + D H +I ++D AT YTSGT
Sbjct: 144 -DKISDLLEGELFV---DDVIEMGERFIEKEGDKFLEIGH----SIQNNDYATITYTSGT 195
Query: 217 TGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-------- 268
T +PKGV+LTH+N + + K +LP H + G++I
Sbjct: 196 TADPKGVILTHRNYTANVEQALTCMTIPEKFKNFIILPLDHCFAHVVGFYIMISQGAIVA 255
Query: 269 --SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
+G M T ++N+ ++ +P+ ++SVP + ++ I+ + + +
Sbjct: 256 TVQQGKSAMET-LKNIPVNIMDVKPNLILSVPALAKSFKKNIENSVKSKGGFIWGLYNFA 314
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
++++FAY +G+ +N +L PL LL +K+++ K+
Sbjct: 315 LKVAFAYNR-----DGWDRGKNG------------------TFLLHPLKLLFDKILFSKM 351
Query: 387 QSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
+ A+G GGG+ L + FY AIG+ + GYGL+E++P+I+A P + LGS G
Sbjct: 352 RQAMGGELEFFVGGGALLDKELQKFYYAIGIPMYQGYGLSEATPIISANTPNRHKLGSSG 411
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
P+ EI+I+++E ++LP G G + V+G VM GY+KNP +TK+ + +DGWL TGD+
Sbjct: 412 IPVKPLEIRIMNSE-GKILPLGESGEIVVKGENVMAGYWKNPISTKETV-KDGWLYTGDL 469
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIG 564
G++ P G L ++GR K ++ S GE P E+EE + +S++I+Q+++
Sbjct: 470 GFMDPD----------GFLHVKGRFKSLLIGSDGEKYSPEEIEEVIVTQSNIIQQMMLYN 519
Query: 565 QDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
A+IV DK L + + V D
Sbjct: 520 NQSAYTIAVIVADKNSPLKGRELIKAVWED 549
>gi|392389526|ref|YP_006426129.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390520604|gb|AFL96335.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 591
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/595 (27%), Positives = 277/595 (46%), Gaps = 93/595 (15%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSC-RWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ GL GVKP +K+++ +N+C W + + G+ GAI+V S S +E I+N +
Sbjct: 48 SRGLLKYGVKPGDKIAIIVNNNCAEWNIIEMGIEKVGAISVPIYSSISPQENEFIFNQAG 107
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
V + + +N+IA + ++ + + + E +P ++ EI++LG +
Sbjct: 108 VKLCFVSHKDLYNKIASIQKNTPSLEEVFCI---------NDEENLP--NWKEILELGED 156
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+S E I DD+ T +YTSGTTG+PKGVML+HKNLL + +P
Sbjct: 157 ------ESLQPEIEKIKEKIQPDDLVTIIYTSGTTGSPKGVMLSHKNLLSNAIDCQERIP 210
Query: 243 --AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPL 299
EN + LS LP HV+ER +G+ + + + + +DL+ QP M VP
Sbjct: 211 EVGENA-RALSFLPVCHVFERTLLNLYQIKGLSIYFAQNLDTIGEDLKFVQPQIMTVVPR 269
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ E +++ +I+ + A V + + S + LI
Sbjct: 270 LVEKVFN----KIYETGANAGPVKSKIFKWS-------------------------LDLI 300
Query: 360 DWLWARIICAILWPL-HLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVK 417
++ + W L + +A KL++ K + +G VSG L ++ + A G+
Sbjct: 301 KDYDPKVKMPLNWYLKYKVANKLIFSKWREGMGGKMVTLVSGSAKLSEKLNRMFWAAGIP 360
Query: 418 VQVGYGLTESSPVIAAR---RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
+ GYGLTE+SPVI+ R + G+VG + + ++KI D G V V
Sbjct: 361 ILEGYGLTETSPVISVNCFDRKGFKI-GTVGKIVKNIDVKIAD-----------DGEVLV 408
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
+G V QGY++NP TK+A EDGW TGDIG G+L L R K
Sbjct: 409 KGPCVFQGYYENPELTKEAFTEDGWFKTGDIGEFDE-----------GLLKLTDRKKQIF 457
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHA 593
S G+ + P LE+A R I QI+V+G+ ++ P A+I P+ + + A++ + +
Sbjct: 458 KTSGGKYIVPAALEDAMKRIPFIEQIMVVGEGKKMPCALIQPNYDFSIKWAEKNGVEIGT 517
Query: 594 DASELSK--------EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVNFLCLA 640
+E++K EK ++ + E +W F++ P E +T+ CL
Sbjct: 518 TPAEIAKSEAIYKEIEKAMAEINQEFGRWEQIKRFRLTP-----EEWTIENGCLT 567
>gi|379007028|ref|YP_005256479.1| long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
gi|361053290|gb|AEW04807.1| Long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
Length = 589
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 258/556 (46%), Gaps = 93/556 (16%)
Query: 49 RVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSR 108
R F E L I AEGL+ +GV P E++++ + W++AD + + GA+ V
Sbjct: 34 RTFRE--LGDVIRQTAEGLKSLGVSPGERVAIMAKTRPEWIIADLAIQSLGAVTVPIYPS 91
Query: 109 SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEI 168
+ E++ ++ ++ VE+P+ +A+ +R++ D V+ +
Sbjct: 92 TPQEQVTYVVEDADIHRAIVESPD----MADKWPPSVTIRWM----------TGDPVQRM 137
Query: 169 PVFSYDEIIDLGR-ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ D + L SR++ D+AT VYTSGTTG PKGVMLTH
Sbjct: 138 DQWWGDRVPSLTPYPSRRS-------------------DLATIVYTSGTTGLPKGVMLTH 178
Query: 228 KNLLHQIRSLYDI---VPA---ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVR 280
NLL I ++ + PA D LS LP H+ ER S+G+ + Y +
Sbjct: 179 GNLLANIEAILALRATSPAFTVTREDVALSFLPLSHILERMVHLLFLSQGVTIAYAESPE 238
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ +L+ +P M++VP ++E LY+ I Q+ + +R + IR R Y
Sbjct: 239 RIPANLREIRPTVMVAVPRIFEKLYAAILDQMTRAGGVKRRLFDWAIRQGI------RRY 292
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
E F W W W A++LVY++I+ A+G + +SG
Sbjct: 293 ERF-----------------WQWGGSRPVWGW-ADRWADRLVYRRIRQAVGGRLRFVISG 334
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
G +L I F+ A+G+ V GYGLTE++PV+A P G+VG P+ +++ A
Sbjct: 335 GAALNPVIGQFFYAVGIPVIEGYGLTETAPVLAVNWPDRPRYGTVGRPLPEVTLQL--AP 392
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
E+L RG + GY+ P T++A +DGW +TGD+G P
Sbjct: 393 DGEIL---------ARGPNITPGYWNRPEETQEAF-QDGWFHTGDLGEWTPD-------- 434
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G L + R K IVLSTG+NV P +E+ L S I Q VV+G Q+ A++ + E
Sbjct: 435 --GFLRVTDRKKYIIVLSTGKNVAPQAVEQKLLLSPWIEQAVVLGNRQKYVAALLYLNPE 492
Query: 580 EVLMAAKRLSIVHADA 595
+V A+ + H DA
Sbjct: 493 KVQEWAR---LHHRDA 505
>gi|339629861|ref|YP_004721504.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|339287650|gb|AEJ41761.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
Length = 593
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 258/556 (46%), Gaps = 93/556 (16%)
Query: 49 RVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSR 108
R F E L I AEGL+ +GV P E++++ + W++AD + + GA+ V
Sbjct: 38 RTFRE--LGDVIRQTAEGLKSLGVSPGERVAIMAKTRPEWIIADLAIQSLGAVTVPIYPS 95
Query: 109 SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEI 168
+ E++ ++ ++ VE+P+ +A+ +R++ D V+ +
Sbjct: 96 TPQEQVTYVVEDADIHRAIVESPD----MADKWPPSVTIRWM----------TGDPVQRM 141
Query: 169 PVFSYDEIIDLGR-ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ D + L SR++ D+AT VYTSGTTG PKGVMLTH
Sbjct: 142 DQWWGDRVPSLTPYPSRRS-------------------DLATIVYTSGTTGLPKGVMLTH 182
Query: 228 KNLLHQIRSLYDI---VPA---ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVR 280
NLL I ++ + PA D LS LP H+ ER S+G+ + Y +
Sbjct: 183 GNLLANIEAILALRATSPAFTVTREDVALSFLPLSHILERMVHLLFLSQGVTIAYAESPE 242
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ +L+ +P M++VP ++E LY+ I Q+ + +R + IR R Y
Sbjct: 243 RIPANLREIRPTVMVAVPRIFEKLYAAILDQMTRAGGVKRRLFDWAIRQGI------RRY 296
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
E F W W W A++LVY++I+ A+G + +SG
Sbjct: 297 ERF-----------------WQWGGSRPVWGW-ADRWADRLVYRRIRQAVGGRLRFVISG 338
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
G +L I F+ A+G+ V GYGLTE++PV+A P G+VG P+ +++ A
Sbjct: 339 GAALNPVIGQFFYAVGIPVIEGYGLTETAPVLAVNWPDRPRYGTVGRPLPEVTLQL--AP 396
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
E+L RG + GY+ P T++A +DGW +TGD+G P
Sbjct: 397 DGEIL---------ARGPNITPGYWNRPEETQEAF-QDGWFHTGDLGEWTPD-------- 438
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G L + R K IVLSTG+NV P +E+ L S I Q VV+G Q+ A++ + E
Sbjct: 439 --GFLRVTDRKKYIIVLSTGKNVAPQAVEQKLLLSPWIEQAVVLGNRQKYVAALLYLNPE 496
Query: 580 EVLMAAKRLSIVHADA 595
+V A+ + H DA
Sbjct: 497 KVQEWAR---LHHRDA 509
>gi|385679999|ref|ZP_10053927.1| AMP-binding protein [Amycolatopsis sp. ATCC 39116]
Length = 603
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 162/601 (26%), Positives = 280/601 (46%), Gaps = 71/601 (11%)
Query: 29 RNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
R D A R + R+R + S + + + A GLR +GV+P +++++ ++N W
Sbjct: 23 RTLGDKTAMR---EKHRGRWREWTWSAYAERVANVAAGLRELGVEPGDRVAIHAENRPEW 79
Query: 89 LVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMR 148
+VAD + GAI++ S E+ ++ +HS + L E+ E ++ +R
Sbjct: 80 VVADLAVQGIGAISMGVYPTSPETEVEYLLSHSGAKVLIAEDEEQLDKALAVRGRLPDLR 139
Query: 149 FIILL--WGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 206
++++ G + PD++ ++++ L R A D ++ + D
Sbjct: 140 RLVVMDPRGVRVEALPDLM------TFEQ---LERPRDNALRDYQES-----VSRLDPDA 185
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 266
A VYTSGTTG PKG M++H NL+ R+ D + D+ LS LP H+ ER
Sbjct: 186 TAILVYTSGTTGPPKGAMISHANLVAAGRTFIDALGGGPDDEVLSYLPLCHIAERLTSVI 245
Query: 267 --IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 324
+++ + + +DL+ QP + VP V+E + +G + ++ +S +R + R
Sbjct: 246 DSVWAGSVVNFGEGGPSFLNDLRDVQPTVFLGVPRVWEKMLAGTEIRMADASRLKRGLYR 305
Query: 325 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 384
F +RI R + LW LAE LV++
Sbjct: 306 ------FWLKQGRRIAPRRMTGRLSAGDRFR------LW-------------LAEFLVFR 340
Query: 385 KIQSAIGI--SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV-L 441
++ +G+ + +SG + + + AIGV V+ GYG TE++ +A P +V L
Sbjct: 341 ALREKLGLVRVRTALSGAAPIAPQVLEYLWAIGVPVREGYGQTENT-ALATLTPDGDVRL 399
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
G+VG P+ E++I AE E+L R + V QGYF+NP AT A+D DGWL+
Sbjct: 400 GAVGRPLPGVEVRI--AEDGEIL---------TRSAGVFQGYFRNPEATAAAVDADGWLH 448
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD+G I G L + R KD I+ + G+N+ P E+E S +R+ +
Sbjct: 449 TGDVGEID----------ADGFLRITDRKKDIIITAGGKNISPSEIENRLKVSPFVREAI 498
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 621
VIG ++ A+I + E V A R + + ++LS + + L ++ T++ Q
Sbjct: 499 VIGDRRKYLTALIGIEAETVGNWATRRGLAYTTYADLSAKPEVVALIQQVVDETNREFSQ 558
Query: 622 I 622
+
Sbjct: 559 V 559
>gi|423220287|ref|ZP_17206782.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
gi|392623364|gb|EIY17467.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
Length = 601
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 266/579 (45%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ ++++ +I+ SV D ++ +DE + +G
Sbjct: 109 RYLFVGEQFQYDAAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ +AR E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEART----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + I++ RI+ L R + P
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIKVG-------RIHNLDYLRRGKTPP--------- 322
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
++ + + + EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 323 ----VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A+D DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P LE + I QI +I ++ A+IVP V AK I + D +EL
Sbjct: 474 KYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMAELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 534 QHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|153809226|ref|ZP_01961894.1| hypothetical protein BACCAC_03537 [Bacteroides caccae ATCC 43185]
gi|149128202|gb|EDM19422.1| AMP-binding enzyme [Bacteroides caccae ATCC 43185]
Length = 601
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 266/579 (45%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ ++++ +I+ SV D ++ +DE + +G
Sbjct: 109 RYLFVGEQFQYDAAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ +AR E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEART----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + I++ RI+ L R + P
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIKVG-------RIHNLDYLRRGKTPP--------- 322
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
++ + + + EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 323 ----VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A+D DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKTEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P LE + I QI +I ++ A+IVP V AK I + D +EL
Sbjct: 474 KYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMAELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 534 QHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|339501423|ref|YP_004699458.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338835772|gb|AEJ20950.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 641
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 274/582 (47%), Gaps = 77/582 (13%)
Query: 21 RHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSL 80
R G + FT D+ ++ H R F LE+ G E+++++
Sbjct: 15 RFGDKPFTFKKTDSGWVSKTFNQSFHESRCFAAFLLER------------GYSLEDRVAI 62
Query: 81 FSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES--VALAVENPEFFNRIA 138
+++ S W+V + G++ G I V + EE+ + +HSE+ V + E R+A
Sbjct: 63 YAEGSPNWIVGEYGIIMAGMIAVPLSFKLLPEEIYYRLDHSEARMVLTNANHLEKICRVA 122
Query: 139 ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR---ESRKAFSDSNDARK 195
+ + +K ++ + ++ +F DE++ G E + D+ +A
Sbjct: 123 QDIQTKTGRSIDVVSLDEDQDLSTSTYPRNQLFRIDEVLAQGAAVLEKHRPRLDTIEAE- 181
Query: 196 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI----VPAENGDKFLS 251
D + T YTSGTTGNPKG+MLTHKN + I SL + VP E G +
Sbjct: 182 ------CSEDRVVTISYTSGTTGNPKGIMLTHKN--YYINSLDSVNIFKVP-ETGYRNFV 232
Query: 252 MLPPWHVYERACG-YFIFSRGIELMY--------TAVRNLKDDLQRYQPHYMISVPLVYE 302
+LP H + + G + RGIEL + +RN+ +++ +P ++++VP +
Sbjct: 233 ILPVDHSFAQTVGIHASIQRGIELWFVDSRGGGMAILRNIPINMKEAEPVFLMTVPALSG 292
Query: 303 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 362
+Q +I + + I+ +Y +G RN K ++L AL+
Sbjct: 293 NFMKKMQAEIDKRGGIIKFLFDTGIKAGISYWG-----DGSFPERNLK--TFLNALV--- 342
Query: 363 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQV 420
+PL +KLV K+++ + +A GG S + FY A+G+ +
Sbjct: 343 --------YFPL----KKLVLDKVKTEVFGKRAQFFTGGGASFDIGQQRFYRALGMPLYQ 390
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYG+TE+SPVI+ LG+ G ++H EI+I+ + P G KG + VRG VM
Sbjct: 391 GYGMTEASPVISTNIEGHTKLGTSGIALDHVEIRIIRDDGTFAEP-GEKGEICVRGPNVM 449
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GYFKNP AT++ L DGWL+TGD+GW+ G L + GRAK ++ + GE
Sbjct: 450 KGYFKNPEATRETL-VDGWLHTGDLGWLDKD----------GYLTVAGRAKALLISADGE 498
Query: 541 NVEPLELEEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEV 581
P +EEA S+ ++ Q++V +R A+I + E+V
Sbjct: 499 KYSPEGIEEAIANSAKVVNQVMVWNDHKRFTCALITLEDEQV 540
>gi|350561455|ref|ZP_08930293.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780487|gb|EGZ34805.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 604
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/529 (29%), Positives = 237/529 (44%), Gaps = 69/529 (13%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+ + E+ + LR G++P +++++ N W+ DQ L G + V + +
Sbjct: 47 ADMAHEVGRWQMALRREGLEPGDRVAMMLRNCREWITFDQAALGLGLVTVPLYTDDRPDN 106
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I + L +E+ + R+ + I+ L G AP
Sbjct: 107 VAYILEQAGVKVLLLEDRAQWRRLHPVRDRLPTVTTIVSLRGFDDDSAP----------- 155
Query: 174 DEIIDLGRESRKAFSD---SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
G A +D D + E D +AT VYTSGTTG PKGVML+H+ L
Sbjct: 156 ------GDPRLTAAADWLFGLDGDLITRLEE--PDHLATIVYTSGTTGRPKGVMLSHRAL 207
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQR 288
L + P D FLS LP H ER GYF+ + G E+ + ++ L +DL+
Sbjct: 208 LFNAHAASQCAPLGGEDVFLSFLPLSHTLERTAGYFLPMAVGAEVAFARSIAQLAEDLRV 267
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
QP ++SVP +YE++Y+ IQ + A R + +A + +A + + G+
Sbjct: 268 VQPTVLVSVPRIYESVYAKIQAGLKQKPAFARRLFQATVNTGWARFEYLQRRAGWSPRLL 327
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 408
+ AR + L L +L Y V GG LP I
Sbjct: 328 LWPLLRRLV------ARQV------LERLGGRLEY------------AVCGGAPLPPPIA 363
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+ +G+ V GYGLTE+SPV+ RP N+ S+G P+ EI+I E +E+L
Sbjct: 364 RFFIGLGLPVYHGYGLTEASPVVTVNRPDDNLPASIGKPLPGVEIRI--GEQDELL---- 417
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
R VM GY++N AT A+D DGWL+TGD +R R G + + G
Sbjct: 418 -----TRSPSVMLGYWRNDEATAAAIDSDGWLHTGD-------KARVDDR---GFVFITG 462
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
R KD IVL GE V P ++E A L Q++VIG+ + A++V D
Sbjct: 463 RIKDIIVLGNGEKVPPADMEMAIQLDPLFDQVLVIGEARPFLSALVVLD 511
>gi|365877184|ref|ZP_09416689.1| Long-chain-fatty-acid--CoA ligase [Elizabethkingia anophelis Ag1]
gi|442587891|ref|ZP_21006705.1| Long-chain-fatty-acid--CoA ligase [Elizabethkingia anophelis R26]
gi|365755044|gb|EHM96978.1| Long-chain-fatty-acid--CoA ligase [Elizabethkingia anophelis Ag1]
gi|442562390|gb|ELR79611.1| Long-chain-fatty-acid--CoA ligase [Elizabethkingia anophelis R26]
Length = 587
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 154/574 (26%), Positives = 265/574 (46%), Gaps = 76/574 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++ ++++ K + I A L+ G++ + ++++SDNS W+ D +L+ GAI
Sbjct: 24 KKENQWKELSWKKFSEMIAKTANALKAAGIQENDSVAIYSDNSAEWITFDLAILSLGAIT 83
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL----LWGKKS 158
V S +++E+ +I N S+S + N E +N E L ++ I++ + GKK
Sbjct: 84 VPIYSTNNAEQAEYIINDSQSKIILAGNQEQYNTCYELLQRNEYLKTIVVAKNKVIGKKE 143
Query: 159 SVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
+ VF + I D R S F D DD AT +YTSGTTG
Sbjct: 144 NT---------VFLREFIAD--RPSTFEFCPKED------------DDTATLIYTSGTTG 180
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIELMY 276
PKGVM+TH N + + ++ +N + LS+ LP HV+ER+ G ++ +
Sbjct: 181 IPKGVMITHGNFRKEFDAHFEFFKFKNFEDELSLAFLPLTHVFERSWSLLSLYGGAKVYF 240
Query: 277 TA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
+N+ L +P M +VP ++ +Y+GI + SS ++ + + I Y
Sbjct: 241 LEDPKNIAHALIEVKPTMMCTVPRFFQKVYAGIHDVVEKSSPTKKKIFNWSLGIGKQYAE 300
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA 395
KR + K H LA+ LV+ K++ +G
Sbjct: 301 LKRTEKEIPFGLKAK------------------------HGLADLLVFSKMKEKLGGRLW 336
Query: 396 GVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
GG S+ + F++AIG+ + VGYGLTE++ ++ T G+ G + EI+
Sbjct: 337 FTPCGGASISPEVTEFFDAIGLHLTVGYGLTETTATLSLFPFTNYKYGTCGKILPGVEIR 396
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I G++ ++ RGS +M+GYF P TK EDGW TGD G I
Sbjct: 397 I-----------GAENEIQARGSGIMKGYFNKPEETKTVFTEDGWFKTGDAGNIDDQ--- 442
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G L + R KD + S G+ + P ++E ++ I+Q++V+ + ++ A+I
Sbjct: 443 -------GNLTITERIKDLLKTSNGKYIAPQQVENILSNNNYIQQVMVVAEGRQFVSALI 495
Query: 575 VPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 608
VP+ E + +++I +E+ K++ I+ LY
Sbjct: 496 VPNFEFLKGELSKMNIPFTSWNEIVKDEAINKLY 529
>gi|386822131|ref|ZP_10109346.1| AMP-forming long-chain acyl-CoA synthetase [Joostella marina DSM
19592]
gi|386423377|gb|EIJ37208.1| AMP-forming long-chain acyl-CoA synthetase [Joostella marina DSM
19592]
Length = 590
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 265/552 (48%), Gaps = 79/552 (14%)
Query: 58 QEILD----FAEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSE 112
QE +D F+ GL +G++P EK+++ + N W +AD G+L GA NV S E
Sbjct: 37 QEYVDKANQFSRGLLRLGIQPNEKIAVITHTNRTEWHIADIGILQIGAQNVPIYPTISEE 96
Query: 113 ELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP-VF 171
+ +I NHS + V + E ++ + ++ + +IP
Sbjct: 97 DYEYILNHSGASYCFVSDNEILEKLNAIKQNVPTLKEVYAF------------GDIPNTK 144
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
+++EI+ LG + K+ D +ARK + + ++D+AT +YTSGTTG PKGVML+HKN++
Sbjct: 145 NWEEILTLGDD--KSNQDEVEARK----KAVTTEDLATIIYTSGTTGRPKGVMLSHKNIV 198
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 290
+ + + VP + D LS LP H++ER Y GI++ + ++ + D+L+ +
Sbjct: 199 SDVLASEERVPLDPRDVALSFLPICHIFERMVVYLYQHCGIKIYFAESIDKMSDNLKEVK 258
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
PH M VP + E +Y +I+ A + + L F +E +
Sbjct: 259 PHVMTVVPRLLEKVYD----KIYAKGADLTGIKKKLF---FWAIELGHKFEPYGA----- 306
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+ W +I A KL++ K Q +G + K VSG +L +
Sbjct: 307 ---------NGAWYEFQLSI-------ARKLIFSKWQEGLGGNLKVMVSGSAALQPRLSR 350
Query: 410 FYEAIGVKVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
+ A G+ V GYGLTE+SPVI+ ++ +G+VG + E+KI AE E++
Sbjct: 351 VFGAAGIPVMEGYGLTETSPVISVNDQKNRGWKIGTVGKMLPGVEVKI--AEDGEII--- 405
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
+G VM GY+ + T +A+ E G+ +TGDIG I G L +
Sbjct: 406 ------CKGPNVMMGYYNDEEKTNEAM-EGGYFHTGDIGEIDED----------GFLKIT 448
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
R K+ S G+ V P +E +S I QI+VIG+ ++ P A I P+ E V AKR
Sbjct: 449 DRKKEMFKTSGGKYVAPQLIENLMKQSRFIEQIMVIGEGEKMPAAFIQPNFEFVEEWAKR 508
Query: 588 LSI-VHADASEL 598
+I V+ D ++
Sbjct: 509 HNIEVNGDYKKM 520
>gi|374386313|ref|ZP_09643813.1| hypothetical protein HMPREF9449_02199 [Odoribacter laneus YIT
12061]
gi|373224242|gb|EHP46582.1| hypothetical protein HMPREF9449_02199 [Odoribacter laneus YIT
12061]
Length = 635
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 265/581 (45%), Gaps = 92/581 (15%)
Query: 26 VFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNS 85
+F R+CV +R ++ S+ + D A GL IG+K E+++L S+
Sbjct: 7 LFERSCVKFPDNPYLWEKRQGKYEAMTYSQTNSRVRDIAAGLMAIGIKKGERVALLSEGR 66
Query: 86 CRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKA 145
W+ A+ G+L G INV R + +EL+ NHSE+ + V S
Sbjct: 67 RDWVCAELGILYAGGINVPLSIRLTEQELVFRLNHSEARFVFV--------------SSY 112
Query: 146 AMRFIILLWGKKSSVAPDIVEEIPVFSYD-EIIDLGRESRKAFSDSNDARKHYKY----- 199
++ + + G+ +S VE I VF Y EI D +F+D + K + +
Sbjct: 113 YLKRLRNIEGQLNS-----VERIFVFDYKGEITD----KYVSFTDLVEKGKRHLHIFPGC 163
Query: 200 -ETIG----SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 254
ET+G +DIA YTSGTT PKG++LTH N + + ++ K L LP
Sbjct: 164 LETVGKTIRGEDIANISYTSGTTAEPKGILLTHANYVSNVLQADSLIRIPAYYKILLFLP 223
Query: 255 PWHVYERACGYFIFSRGIELMYTA---------------VRNLKDDLQRYQPHYMISVPL 299
H + G + F MY +RN+ +++ +PH ++SVP
Sbjct: 224 WDHSFAHTVGIYSF------MYNGASLAAVDFGNSPLEFLRNIPVNMKEIKPHVLLSVPA 277
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ + I+ +I R + + FAY R E F
Sbjct: 278 IAKNFRKNIEAKI--RRQGRFIEILYTWGLKFAYWFQGR--ESFA--------------- 318
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 418
R + ++ +P+ L + L++ KI+ + G + + GG L + + +Y A+G+ +
Sbjct: 319 ----RRGVKSLAYPIWYLFDCLLFFKIRQSFGGELRFFIGGGALLDIELQQYYCALGIPM 374
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYGL+E+SPVI++ P LGS G P+ E+KI D E + L AG G + ++G
Sbjct: 375 YQGYGLSEASPVISSNTPERYRLGSSGMPVRPMELKICD-EGGKALAAGETGEIVIKGGN 433
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
VM+GY+KN S+TK+ + E GWL TGD+G++ G L++ GR K ++ +
Sbjct: 434 VMRGYWKNESSTKEVIRE-GWLYTGDLGYVDSD----------GFLMVLGRFKSLLIAND 482
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQR-RPGAIIVPDK 578
GE P +EEA + S ++ DQ +I P+K
Sbjct: 483 GEKYSPEGIEEAIVEKSKFIDYCILYNDQSLYTVGLIAPNK 523
>gi|255692993|ref|ZP_05416668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides finegoldii
DSM 17565]
gi|260621305|gb|EEX44176.1| AMP-binding enzyme [Bacteroides finegoldii DSM 17565]
Length = 602
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 262/580 (45%), Gaps = 66/580 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A L +GV +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANALVALGVGEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE- 182
L V ++ +++ +I+ SV D ++ +DE + +G
Sbjct: 109 RYLFVGEQFQYDAAFSIFGFCTSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IV 241
+ R Y DD+A +YTSGTTG PKGVML H L Q R+ D +
Sbjct: 165 PHNDVVEERTGRASY-------DDLANILYTSGTTGEPKGVMLHHSCYLEQFRTHDDRLT 217
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLV 300
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP
Sbjct: 218 TMSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRF 277
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E +Y+G+Q++I ++ ++ + IR+ +I+ L + + P
Sbjct: 278 WEKVYAGVQEKINETTGMKKALMLDAIRVG-------KIHNLDYLRKGKTPP-------- 322
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKV 418
++ + + + EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 323 -----VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINM 374
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG
Sbjct: 375 VVGYGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKT 423
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
+ +GY+K AT A+D DGW +TGD G+ G L L R KD S
Sbjct: 424 ITKGYYKKAEATAAAIDSDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSN 472
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G+ + P LE + I QI +I ++ A+IVP V AK I + D SEL
Sbjct: 473 GKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMSEL 532
Query: 599 SKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 533 LQHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|27376399|ref|NP_767928.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
110]
gi|27349539|dbj|BAC46553.1| blr1288 [Bradyrhizobium japonicum USDA 110]
Length = 619
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 153/553 (27%), Positives = 266/553 (48%), Gaps = 74/553 (13%)
Query: 46 HRFRVFCES--KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
H R +S +++ E + + L P E++++ N + DQ L+ G + V
Sbjct: 50 HAGRWVSQSWHEIDAEFELWRQALAAENFSPGERVAILMPNGIAHIAMDQASLSRGLVPV 109
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
+ + + + +I S ++ L V+ + I T A++ I V D
Sbjct: 110 PMHAVDNPDSIAYILADSGALLLFVDTLARWQAIVATGQPLDALKRI---------VCAD 160
Query: 164 IVEEIP----VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ +P + + D+ + + SD + DD+A VYTSGTTG
Sbjct: 161 MTGPVPADARIVALDQWLASAPGATAPLSDV----------AVAPDDLAAIVYTSGTTGR 210
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT- 277
PKGVML+H N++ ++++ + A D FLS LP H +ER GY+ + G + Y
Sbjct: 211 PKGVMLSHDNVVANVKAIAHRIAASPDDVFLSFLPLSHTFERTGGYYYPIAAGACVAYAR 270
Query: 278 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
+V L DDL+ +P ++SVP +YE +Y+ I + ++ + + RAL+ ++ A +
Sbjct: 271 SVPQLGDDLKHVRPTVLVSVPRIYERVYALIMQHRASAGS----IERALLDLTIAVGG-R 325
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 396
R + +Q ++L+D L WP L ++LV K+ + +G +
Sbjct: 326 RF--------DARQGRGALSLLDRL--------AWP---LLKQLVADKVLAQLGGRLRVA 366
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
VSGG + + + A+G+ + GYG+TE+SPV++ P N SVGH ++ E ++
Sbjct: 367 VSGGAPIAEPVIRLFLALGLDILQGYGMTETSPVVSVNTPEDNDPRSVGHVLDGVEARL- 425
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
E +E+L VRG VM GY+ P T++ + DGWL+TGD +
Sbjct: 426 -GENDELL---------VRGPSVMLGYWHKPEETRRVKEADGWLHTGD-----------Q 464
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
+R G + + GR KD +V STGE + P++LE A L L Q +V+G+ + A++V
Sbjct: 465 ARIENGRITITGRIKDILVTSTGEKIAPVDLETAILADPLFEQALVVGEQRPFLAALVVL 524
Query: 577 DKEEVLMAAKRLS 589
+ + + +RL+
Sbjct: 525 NAKAWVQEKERLA 537
>gi|254488381|ref|ZP_05101586.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
gi|214045250|gb|EEB85888.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
Length = 651
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 163/591 (27%), Positives = 269/591 (45%), Gaps = 67/591 (11%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R ++ Q + + L+ G+ +++++ N W+ D +A G I V
Sbjct: 85 WRAVTWQEMAQIVARYRTALQFAGLVRGDRVAVLLANCIDWIAFDIAAMANGLITVPLYP 144
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
S+ + I HS + V+N +N +A L ++R + W + AP V
Sbjct: 145 HDSAANIRFILAHSGARLCLVDNAGRWNTLAADLERDVSLREV---WTRSGDQAPRNVHG 201
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ +++ + A D R + DIAT ++TSGTTG PKG ML+H
Sbjct: 202 TDIRCLSDVLSV------AEGDPGPLR-------CAAQDIATVIHTSGTTGQPKGAMLSH 248
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDD 285
LL ++ + +P D FLS+LP H +ER Y + G + A + L+ D
Sbjct: 249 HALLWNAEAVTEFIPPLTSDIFLSLLPLAHSFERTATYHMAMMGGSRVVFARSIDTLRQD 308
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L +P +++VP +YE + +Q + S RR++ +A + + F+ +G
Sbjct: 309 LLEVRPTILVAVPRLYERICEAVQSKAAHSPITRRLLGQA---ATIGWQHFE-ARQG--- 361
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 404
K P + L ++WP + E+LV + + A G + + VSGG L
Sbjct: 362 --RAKPPGAITRL-----------LVWP---MLERLVARPVLRAFGGNVRVAVSGGAPLS 405
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARR-PTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ F +G+ + GYGLTE++PV+ A CN GS G P+ EI++
Sbjct: 406 LEASHFLIGLGLPLVEGYGLTEAAPVVTATTLKDCNP-GSAGRPLRGIEIRL-------- 456
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
GS G + V+ +M GY+ +P + A+D+DGWL+TGD IA H+ G
Sbjct: 457 ---GSDGELLVKSPSLMSGYWHDPERSAAAIDQDGWLHTGD---IAEFHA--------GR 502
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 583
L + GR KD IVLSTG+ V +E A + L Q VIG ++ AI+V ++ +
Sbjct: 503 LFITGRLKDLIVLSTGKKVVSATVEAAVVADPLFEQCCVIGDNRSCIVAIVVLCQDRWEV 562
Query: 584 AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 634
AK+ + AD + + + E + + QI +H V P+TV
Sbjct: 563 FAKQHHLDPADPNMPTAAAALLTRVTEAMRDPPPFA-QIRAVHAVLLPWTV 612
>gi|332665277|ref|YP_004448065.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332334091|gb|AEE51192.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 593
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 166/567 (29%), Positives = 260/567 (45%), Gaps = 79/567 (13%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDN-SCRWLVADQGMLATGAI 101
+R + VF + +I + L +G++ E++++ + + S W D GM G I
Sbjct: 26 KRQGQSMVFSTRDCQHKINQVSAFLLRMGLRRGERVAIMAKHGSPFWNFLDFGMQQIGLI 85
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + S EEL I + A + E + I + +++ + + V
Sbjct: 86 VVPLHATSGVEELRFILQDAAIRACFTDTEELYATIHNLQTESPDLEWVVPFY-PLAGVN 144
Query: 162 PDIVEEIPVFSYDEI--IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
P +++ + S +E+ I + RES + +D+AT +YTSGTTG
Sbjct: 145 PCLLDLLAEPSSEELETIKILRES------------------VVENDLATIIYTSGTTGR 186
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-A 278
PKGVML+H+N++ I+S ++P K LS LP H++ER Y + G + Y
Sbjct: 187 PKGVMLSHQNIISNIKSTIALLPVNCDKKTLSFLPLSHIFERMVIYTYVAVGASVTYAEG 246
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
L +L+ +PHY+ +VPL+ E L I S R+ + + I + Y KR
Sbjct: 247 QEQLLSNLREVRPHYITAVPLIIERLVEQIMANSKKGSFLRKRIIKWAIELGKNYYDSKR 306
Query: 339 IYEGFCLTRNQKQP-SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG- 396
QP +Y W R+ LA LV+ + + G G
Sbjct: 307 ------------QPLAY--------WLRLS---------LARILVFNRWRKMFGGRVEGI 337
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR--PTCNVLGSVGHPINHTEIK 454
V G +L + + A G+KV+ GYGLTE+SPVIA R P + G+VG PI E++
Sbjct: 338 VVGAAALNPVLGRLFSAAGLKVREGYGLTETSPVIAFNRFEPGGSRFGTVGMPIPGVEVR 397
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHS 513
IV+ + G V+V+G VM GY++ P A+++ + EDGW TGD+G W+ H
Sbjct: 398 IVNPDEE------GAGEVQVKGPNVMLGYYQQPEASREVMTEDGWFRTGDVGMWV---HK 448
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
R L L+GR D G+ + P +E+ L S I Q +V G + P A+
Sbjct: 449 R--------FLKLKGRQDDMFKTGAGKFIAPEAVEKQLLHSEYISQCLVAGASRPAPYAL 500
Query: 574 IVP--DKEEVLMAAKRLSIVHADASEL 598
IVP DK E A++ VH A +
Sbjct: 501 IVPRFDKLEEWCKAQK---VHWTAPQF 524
>gi|229820393|ref|YP_002881919.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
gi|229566306|gb|ACQ80157.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
Length = 606
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 263/554 (47%), Gaps = 81/554 (14%)
Query: 34 AVATRIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
A +R+ + ++ + ++R + +++E ++ A+GL G++P E++++ S W + D
Sbjct: 28 ATPSRVLLEQQVDGQWRPYTAAEVEALVVGVAKGLVAHGIRPGERVAIMSRTRFEWTILD 87
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
+ GA+ V SS + I + S +VA+ VE+ +AE
Sbjct: 88 FAIWHAGAVPVPVYETSSVAQTAWILSDSGAVAVIVESSAHGQVVAEAQAE--------- 138
Query: 153 LWGKKSSVAPDIVEEIPVFSYDE--IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 210
APD+ V++ D+ + DL R+ +D +DA +++ +G +D+AT
Sbjct: 139 --------APDVRT---VWTIDDGALEDLTRDG----ADVDDAEIAARHDAVGMEDLATI 183
Query: 211 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFI 267
+YTSGTTG P+G LTH N + ++ ++P A G + L +P HV+ R +
Sbjct: 184 IYTSGTTGRPRGAELTHGNFVALTKNAIAVIPDVFAAPGARTLLFMPLAHVFARFVEVLV 243
Query: 268 FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
+ G+ L +T L DL ++P +++SVP V+E +Y+ + +
Sbjct: 244 VAAGVPLGHTPDTTTLVADLGTFRPTFILSVPRVFEKVYNSAEAKAAAGGKE-------- 295
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
FA+ A R + + + PSY + L H +A KLV K+
Sbjct: 296 --KIFAWAA--RTAIAYSRSLDTGGPSYGLRL---------------KHRIAHKLVLHKL 336
Query: 387 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
Q A+G + VSGGG L + F+ IG+ V GYGLTE++ + RP +G+VG
Sbjct: 337 QDAMGGKLEHAVSGGGPLGERLGHFFRGIGLVVLEGYGLTETTAPLNVNRPERVKIGTVG 396
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
P+ I+I A E+L +G V +GY N +AT +A+ +DGW +TGDI
Sbjct: 397 PPLPGIGIRI--APDGEIL---------AQGIAVFRGYHDNDAATAEAM-KDGWFHTGDI 444
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G + G L + GR K+ IV + G+NV P LE+A L+ Q +V+G
Sbjct: 445 GEL----------DSDGYLRITGRKKEIIVTAGGKNVAPAPLEDAIRAHPLVSQCLVVGD 494
Query: 566 DQRRPGAIIVPDKE 579
+ A+I D E
Sbjct: 495 GRPFVAALITLDPE 508
>gi|423301229|ref|ZP_17279253.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
gi|408471830|gb|EKJ90359.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
Length = 602
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 262/580 (45%), Gaps = 66/580 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A L +GV +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANALVALGVGEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE- 182
L V ++ +++ +I+ SV D ++ +DE + +G
Sbjct: 109 RYLFVGEQFQYDAAFSIFGFCTSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IV 241
+ R Y DD+A +YTSGTTG PKGVML H L Q R+ D +
Sbjct: 165 PHNDVVEERTGRASY-------DDLANILYTSGTTGEPKGVMLHHSCYLEQFRTHDDRLT 217
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLV 300
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP
Sbjct: 218 TMSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRF 277
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E +Y+G+Q++I ++ ++ + IR+ +I+ L + + P
Sbjct: 278 WEKVYAGVQEKINETTGMKKALMLDAIRVG-------KIHNLDYLRKGKTPP-------- 322
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKV 418
++ + + + EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 323 -----VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINM 374
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG
Sbjct: 375 VVGYGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKT 423
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
+ +GY+K AT A+D DGW +TGD G+ G L L R KD S
Sbjct: 424 ITKGYYKKAEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSN 472
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G+ + P LE + I QI +I ++ A+IVP V AK I + D SEL
Sbjct: 473 GKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMSEL 532
Query: 599 SKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 533 LQHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|345870330|ref|ZP_08822283.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
gi|343921902|gb|EGV32611.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
Length = 605
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 252/539 (46%), Gaps = 64/539 (11%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
R R + ++ ++ + + + L + P +++++ N W++ DQ + G
Sbjct: 35 RYHERGNGWKELTWREMSTWVARWRQALSAENLMPGDRVAILLRNCPDWIMFDQAAFSLG 94
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKA-AMRFIILLWGKKS 158
+ V + ++ +I + L +++ + R+AE + +R +IL + S
Sbjct: 95 LVTVPLYTDDRADNAAYILQDAAVKTLLIQDAGRWRRLAEVVGDATWPLRVVIL---EPS 151
Query: 159 SVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
A ++ EE P E + +S A + + + +AT VYTSGTTG
Sbjct: 152 PAAYELAEEDPRVVVAE---------RWLPESAPALQPRMGD---PNSLATIVYTSGTTG 199
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT 277
PKGVML+H N+L + ++ D FLS LP H+ ER GY++ G + Y
Sbjct: 200 RPKGVMLSHHNMLANAHGVITLINVYREDVFLSFLPLSHMLERTGGYYLPLMAGATVAYA 259
Query: 278 -AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
++ L +D+Q +P +I+VP V+E +Y I Q+ T AA R + +++ + +F
Sbjct: 260 RSIAQLAEDMQTIRPTVIIAVPRVFERIYQRIADQLETKPAAVRWLFNTAVKV--GWRSF 317
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG 396
+R R P+ L LWP L K+ ++ G +A
Sbjct: 318 QR-----TQGRAGWHPTLL---------------LWP--FLRHKVGAPVLERLGGRIRAA 355
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 456
VSGG +LP + + +G+ + GYGLTE+SPV++ N+ SVG PI +++I
Sbjct: 356 VSGGAALPNSVARTFIGLGLPLIQGYGLTETSPVVSVNPLQANIPDSVGPPIRGIKVRI- 414
Query: 457 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
G+ ++++G VM GY+ N +AT + L +DGW +TGD +
Sbjct: 415 ----------GADDELQIKGHCVMMGYWNNHAATAKVLSQDGWFHTGD-----------Q 453
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
+R G + + GR KD +VLS GE V P +LE A L Q VV+G+ A++V
Sbjct: 454 ARIENGRVYITGRLKDILVLSNGEKVPPGDLELAISLDPLFDQTVVLGEGHSYLTALLV 512
>gi|42524534|ref|NP_969914.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
gi|39576743|emb|CAE80907.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
Length = 593
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 269/560 (48%), Gaps = 64/560 (11%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
L +G+KP +++++ ++ W D G+ AI V ++++++ +I N+SES
Sbjct: 50 ALLSLGIKPGDRVAIMANTRVEWSTTDLGIFGIKAITVPIYQNNTADDVEYILNNSESRI 109
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
L E+ + E++ SK ++++ ++ PD+V ++ +++ +G++
Sbjct: 110 LICESRGPL-KTFESVRSKCPKVEKVIVF-DETCPNPDVV------TWPKLLQMGKD--- 158
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 245
+ + ++ ++ +DIAT +YTSGTTG PKGV++TH + ++ + + A
Sbjct: 159 -YLAKHPSQFQELCASLTQEDIATILYTSGTTGRPKGVVMTHLQAISEVSEAFPLCGATE 217
Query: 246 GDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 304
D LS LP H+ R + G L + ++ ++ +L +P +MISVP ++E +
Sbjct: 218 ADTSLSFLPYAHILGRIEHWGHAYIGFTLAFAESLEKIRGNLTEVRPTFMISVPRIFEKI 277
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
Y+ + QI T +V AL I +K +
Sbjct: 278 YAAVIAQIQTQPLKMKVFNWAL-EIGTKVGEYK------------------------MSG 312
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
+++ L + LA+KLV KI +A G + +SGG +P I LF+ A G+ + GYG
Sbjct: 313 QVLPLDLLVKYELAKKLVLDKIPTAFGGRLRFAISGGAPIPREIALFFHAAGILILEGYG 372
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
LTE++ + P GSVG PI ++KI AE E+L V+ +VM+ Y
Sbjct: 373 LTETTAAVTVNTPFNYKFGSVGRPIGEVKLKI--AEDGEIL---------VKSDKVMKEY 421
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+KNP ATK+A DGW +TGDIG I P GG L + R KD I + G+ V
Sbjct: 422 YKNPEATKEAFT-DGWFHTGDIGEILP----------GGDLKITDRKKDLIKTAGGKYVA 470
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 603
P LE S I ++V G ++ A++ D+ V AK + ++D + L +
Sbjct: 471 PQRLEGLLSLSPYIANVLVHGDQRKYIVALVTLDRPTVENLAKEKQVSYSDWNSLVQSPF 530
Query: 604 ISLLYGELRKWTSKCSFQIG 623
+ L +RK ++ + Q+
Sbjct: 531 VQDL---IRKAVAETNSQLA 547
>gi|428174665|gb|EKX43559.1| hypothetical protein GUITHDRAFT_53017, partial [Guillardia theta
CCMP2712]
Length = 389
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 201/371 (54%), Gaps = 24/371 (6%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+ I A L+ +GV+ +K++LFS+NS RW + D +L GA++VVRG+ + +E
Sbjct: 29 SQASAAITRMAGFLQELGVQKGDKIALFSENSYRWSLVDSAILQAGAVDVVRGATAPVDE 88
Query: 114 LLHIYNHSESVALAVENPEFFNRIAET--LCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
L IY+ S S A VEN E ++ + L ++ F+++++ K S I E
Sbjct: 89 LKFIYSDSGSKACVVENVELLEKLVKQAKLGTEVEPEFVVVMYPKDKS-GETIKREA--- 144
Query: 172 SYDEIIDLGRESRKAFS--DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
LG S + + + + Y ++ +D AT +YTSGTTG+PKGV+LTH N
Sbjct: 145 ------GLGSSSTRVVTVDEMLQSSSSYTPVSVEEEDTATLLYTSGTTGHPKGVVLTHGN 198
Query: 230 LLHQ-IRSLYDI-VPAEN--GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 285
LLHQ + ++Y +P E GD FL +LP WH++ER Y+ RG +L+Y++V+ K D
Sbjct: 199 LLHQMLENVYSPSLPLEPLPGDVFLCILPCWHIFERFAEYYSLVRGAKLVYSSVKTFKSD 258
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
L R++PH +++VP +YE ++ G+Q + S+ +R++ ++ KR
Sbjct: 259 LLRHRPHILVAVPRLYENVFQGVQAKFAAGSSLQRMLVAFFTAVATKKMEAKRSLLNAAA 318
Query: 346 TRNQKQPSYLV-----ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
Q QP++L L+D L + + +L P + ++L++ K++ +G K +SG
Sbjct: 319 IEPQDQPAFLQRSPAKKLLDQLVSMLTVFLLAPFAAIGDRLIWSKVREGLGGRIKCLISG 378
Query: 400 GGSLPMHIDLF 410
G LP +D F
Sbjct: 379 GSKLPTALDNF 389
>gi|423316667|ref|ZP_17294572.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
gi|405583008|gb|EKB56979.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
Length = 593
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 170/592 (28%), Positives = 270/592 (45%), Gaps = 112/592 (18%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNS-CRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHS 121
F+ GL +G+KP +K++L + + W V D G G + V SSE+ +I+ +S
Sbjct: 46 FSRGLLKLGIKPGDKIALITSATRTEWCVCDLGASQIGVVIVPVYPTISSEDYAYIFGNS 105
Query: 122 ESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP----VFSYDEI- 176
E + + ETL K + EIP VFS+DEI
Sbjct: 106 EIKYCFLSD--------ETLLEKVM----------------KVKTEIPTLQGVFSFDEIK 141
Query: 177 --------IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
+DLG S+++ + +A ++ I DD+AT +YTSGTTG PKGVML+HK
Sbjct: 142 GCANWKEVLDLG--SQESGQEEVEAIRN----IIKEDDLATIIYTSGTTGKPKGVMLSHK 195
Query: 229 NLLHQIRSLYDIVPAENGDK-----FLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNL 282
N++ + + +P ++G K LS LP H++ER + G + + ++ +
Sbjct: 196 NIVSNVVASVPRIPRKSGLKNTDTVVLSFLPICHIFERMIYHLYQYNGFSIYFAESIEKM 255
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++++ +PH M VP + E +Y I + ++A + ++ + A K I
Sbjct: 256 GENIKEVKPHIMTVVPRLIEKVYDKIYDK---GTSAGGLKSKIFLWALGVMKAKKGI--- 309
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGG 401
+PS L +LA+KLV+KK + +G + VSG
Sbjct: 310 -------SKPSGLK------------------EILADKLVFKKWREGLGGNIITLVSGSA 344
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
+L ++ ++ G+ + GYGLTE+SPVI+ +GSVGHP+++ E+KI+
Sbjct: 345 ALSARLNKMFQNAGIPILEGYGLTETSPVISVNSFGRIKVGSVGHPLDNLEVKIL----- 399
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
S G + V+G V GY+KN TK+ EDG+ TGDIG
Sbjct: 400 ------SDGEIAVKGPSVFIGYYKNEEMTKEVFTEDGFFKTGDIGHFDEE---------- 443
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
G L + R K+ S G+ V P +E A S I QI+V+G+ ++ P A + PD V
Sbjct: 444 GYLHITDRKKEMFKTSGGKYVAPQVIENMAKASKFIEQIMVVGEGEKMPAAFVQPDFAFV 503
Query: 582 LMAAKRLSIVHAD-------ASELSK--EKTISLLYGELRKWTSKCSFQIGP 624
A R + + EL K E+ I L +L KW F++ P
Sbjct: 504 KNWAIRKGYTIGETPEEMVKSPELRKRLEREIDYLNTKLGKWEQVKKFELTP 555
>gi|422911306|ref|ZP_16945932.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
gi|341631825|gb|EGS56702.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
Length = 601
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDVALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSLHQDRAPLDALLEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ RG Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYRGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 400
C + Q+QPS++ L H LA+KLV K+++ +G K GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQLADKLVLSKLRALLGGRIKFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|406673705|ref|ZP_11080926.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
gi|405586170|gb|EKB59962.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
Length = 593
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 169/592 (28%), Positives = 270/592 (45%), Gaps = 112/592 (18%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNS-CRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHS 121
F+ GL +G+KP +K++L + + W + D G G + V SSE+ +I+ +S
Sbjct: 46 FSRGLLKLGIKPGDKIALITSATRTEWCICDLGASQIGVVIVPVYPTISSEDYAYIFGNS 105
Query: 122 ESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP----VFSYDEI- 176
E + + ETL K + EIP VFS+DEI
Sbjct: 106 EIKYCFLSD--------ETLLEKVM----------------KVKTEIPTLQGVFSFDEIK 141
Query: 177 --------IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
+DLG S+++ + +A ++ I DD+AT +YTSGTTG PKGVML+HK
Sbjct: 142 GCANWKEVLDLG--SQESGQEEVEAIRN----IIKEDDLATIIYTSGTTGKPKGVMLSHK 195
Query: 229 NLLHQIRSLYDIVPAENGDK-----FLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNL 282
N++ + + +P ++G K LS LP H++ER + G + + ++ +
Sbjct: 196 NIVSNVLASVPRIPRKSGLKNTDTVVLSFLPICHIFERMIYHLYQYNGFSIYFAESIEKM 255
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++++ +PH M VP + E +Y I + ++A + ++ + A K I
Sbjct: 256 GENIKEVKPHIMTVVPRLIEKVYDKIYDK---GTSAGGLKSKIFLWALGVMKAKKGI--- 309
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGG 401
+PS L +LA+KLV+KK + +G + VSG
Sbjct: 310 -------SKPSGLK------------------EILADKLVFKKWREGLGGNIITLVSGSA 344
Query: 402 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 461
+L ++ ++ G+ + GYGLTE+SPVI+ +GSVGHP+++ E+KI+
Sbjct: 345 ALSARLNKMFQNAGIPILEGYGLTETSPVISVNSFGRIKVGSVGHPLDNLEVKIL----- 399
Query: 462 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 521
S G + V+G V GY+KN TK+ EDG+ TGDIG
Sbjct: 400 ------SDGEIAVKGPSVFIGYYKNEEMTKEVFTEDGFFKTGDIGHFDEE---------- 443
Query: 522 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
G L + R K+ S G+ V P +E A S I QI+V+G+ ++ P A + PD V
Sbjct: 444 GYLHITDRKKEMFKTSGGKYVAPQVIENMAKASKFIEQIMVVGEGEKMPAAFVQPDFAFV 503
Query: 582 LMAAKRLSIVHAD-------ASELSK--EKTISLLYGELRKWTSKCSFQIGP 624
A R + + EL K E+ I L +L KW F++ P
Sbjct: 504 KNWAIRKGYTIGETPEEMVKSPELRKRLEREIDYLNTKLGKWEQVKKFELTP 555
>gi|417825702|ref|ZP_12472290.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
gi|340047187|gb|EGR08117.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
Length = 601
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRALLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ + AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|238918664|ref|YP_002932178.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
gi|238868232|gb|ACR67943.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
Length = 603
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 269/565 (47%), Gaps = 60/565 (10%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V+C ++ +++ A L +GV+ +E++++F+ NS W +AD +L A+ V + +
Sbjct: 37 VYCWHEIGEQVSRLACALLALGVEVQERVAIFAHNSVAWSLADLAILHLRAVTVPVYATN 96
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
++ + +I N + L V+ ++ S + II L I +
Sbjct: 97 TAAQAAYILNDASVRILFVDGQAQYDAALALRDSCPQLTRIIALSDGIDLRGCAIACHLH 156
Query: 170 VFSYD-EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
F++D + L R ++ A + + DD+ T +YTSGTTG PKGVML ++
Sbjct: 157 GFAHDGDSASLARLAQLA----------QRIDEASLDDLFTLIYTSGTTGEPKGVMLDYR 206
Query: 229 NLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDL 286
NL Q+ L+D + D L LP HV+ERA +++ G + +Y NL ++ +
Sbjct: 207 NLAAQL-YLHDARLNVSEQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAM 265
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
Q +P M +VP YE ++S +Q ++ + RR + +A K+ + +
Sbjct: 266 QAVRPTMMCAVPRFYEKIFSAVQARVAQAPWLRRQL------FHWALWCGKQRFLNERVG 319
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPM 405
R+Q R++ A +H LA++LV K+++ +G + + G L
Sbjct: 320 RSQ--------------GRLMTA----MHRLADRLVLSKLRAILGGRVRFLPAAGAKLDD 361
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
H+ LF++A+G+ ++ GYG+TE+ ++ GS+G P+ E++I E+NE+
Sbjct: 362 HVILFFQALGLNIKYGYGMTETCATVSCWEEQGFRFGSIGRPLPGVEVRI--GESNEI-- 417
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
+VRG VM+GYF P T Q DGWL TGD G + G L
Sbjct: 418 -------QVRGPIVMRGYFNKPQETAQTFTADGWLKTGDAGALDAQ----------GHLF 460
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ R KD + S G+ + P +E R I+Q+ VI ++ A+IVP + + A
Sbjct: 461 ITERLKDLMKTSNGKYIAPQLVEGTLARDRFIKQVAVIADARKFVSALIVPCFDSLEEYA 520
Query: 586 KRLSIVHADASELSKEKTISLLYGE 610
+ +++ + D +L + I L+ +
Sbjct: 521 RSINLKYHDRLDLLRHSHIVALFEQ 545
>gi|443293070|ref|ZP_21032164.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
gi|385882928|emb|CCH20315.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
Length = 604
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 238/529 (44%), Gaps = 73/529 (13%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ E+ A GL GV P +++L S W + D + GA+ V SS+E+
Sbjct: 56 QFRDEVTAVARGLIAAGVSPGARVALMSRTRYEWTLLDYAIWTVGAVTVPIYETSSAEQA 115
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
I S +VA VE + +A + + + LW +I D
Sbjct: 116 AWILADSGAVAAVVETDAHADLVAGV---RDRLPELTHLW------------QIDRDGVD 160
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E++ G + A + + + + D+AT +YTSGTTG PKG +LTH+N+ I
Sbjct: 161 ELVTAG-------AAVELAEVEQRRKAVRAGDLATIIYTSGTTGRPKGCVLTHRNMYADI 213
Query: 235 RSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQP 291
+ ++P G L LP H + R + L + +NL +LQ ++P
Sbjct: 214 ANAVPVLPNLFNAGAATLLFLPLAHAFARLIQIGVVQARATLAHCPDTKNLVGELQEFRP 273
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+++SVP V+E +Y+ KQ + V ARA +++ AY+ G L +
Sbjct: 274 TFVLSVPRVFEKVYNA-AKQKAEADGKGGVFARAE-QVAIAYSEALETPRGPGLALRAQ- 330
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLF 410
H + ++LVY+K+++A+G + +SGG L + F
Sbjct: 331 -----------------------HAVFDRLVYRKLRAALGGRCRDAISGGAPLGARLGHF 367
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ +GV V GYGLTE+SP AA PT +G+VG P+ ++I D G
Sbjct: 368 FRGVGVTVLEGYGLTETSPAAAANLPTGTRIGTVGRPLPGVTVRIED-----------DG 416
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
+ + G V QGY+ N +AT +AL DGW TGD+G + G L + GR
Sbjct: 417 EILISGDLVFQGYWHNEAATAEALSADGWFRTGDLGQL----------DADGYLSITGRK 466
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
K+ IV + G+NV P LE+ LI Q VV+G + A++ D+E
Sbjct: 467 KELIVTAGGKNVAPAVLEDQVRAHPLISQCVVVGDAKPFIAALVTIDEE 515
>gi|329123150|ref|ZP_08251720.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
gi|327471705|gb|EGF17147.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
Length = 607
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 263/559 (47%), Gaps = 63/559 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 48 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 107
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI-VEEIPV-FSY 173
I NH++ L V + E +++ E ++ I+ ++ P I +++ P+ ++
Sbjct: 108 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIV-------AMKPTIQLQQDPLSCTW 160
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ I G +++ N+ + + + D+ T +YTSGTTG PKGVML + NL HQ
Sbjct: 161 ESFIKTGSNAQQ-----NELTQRLNQKQLS--DLFTIIYTSGTTGEPKGVMLDYANLAHQ 213
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPH 292
+ + + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 214 LETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPT 273
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE +Y+ + ++ + R+++ I + Y F L N K
Sbjct: 274 LMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKY---------FDLRANNKAI 324
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
+L L L LA+KLV K++ +G K GG L I LF+
Sbjct: 325 PFL---------------LKKLFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFF 369
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
AIG+ +++GYG+TE++ ++ S+G + ++KI E NE+L
Sbjct: 370 HAIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAKVKI--GENNEIL------- 420
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG VM+GY+K P T QA EDG+L TGD G G L + R K
Sbjct: 421 --VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIK 468
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ + S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I
Sbjct: 469 ELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIK 528
Query: 592 HADASELSKEKTISLLYGE 610
+ D EL K I ++ +
Sbjct: 529 YHDRLELLKNSDILKMFEQ 547
>gi|319774953|ref|YP_004137441.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3047]
gi|317449544|emb|CBY85748.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3047]
Length = 599
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 263/559 (47%), Gaps = 63/559 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI-VEEIPV-FSY 173
I NH++ L V + E +++ E ++ I+ ++ P I +++ P+ ++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIV-------AMKPTIQLQQDPLSCTW 152
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ I G +++ N+ + + + D+ T +YTSGTTG PKGVML + NL HQ
Sbjct: 153 ESFIKTGSNAQQ-----NELTQRLNQKQLS--DLFTIIYTSGTTGEPKGVMLDYANLAHQ 205
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPH 292
+ + + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 206 LETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPT 265
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE +Y+ + ++ + R+++ I + Y F L N K
Sbjct: 266 LMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKY---------FDLRANNKAI 316
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
+L L L LA+KLV K++ +G K GG L I LF+
Sbjct: 317 PFL---------------LKKLFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFF 361
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
AIG+ +++GYG+TE++ ++ S+G + ++KI E NE+L
Sbjct: 362 HAIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAKVKI--GENNEIL------- 412
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG VM+GY+K P T QA EDG+L TGD G G L + R K
Sbjct: 413 --VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIK 460
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ + S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I
Sbjct: 461 ELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIK 520
Query: 592 HADASELSKEKTISLLYGE 610
+ D EL K I ++ +
Sbjct: 521 YHDRLELLKNSDILKMFEQ 539
>gi|167753742|ref|ZP_02425869.1| hypothetical protein ALIPUT_02023 [Alistipes putredinis DSM 17216]
gi|167658367|gb|EDS02497.1| AMP-binding enzyme [Alistipes putredinis DSM 17216]
Length = 634
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 170/624 (27%), Positives = 291/624 (46%), Gaps = 93/624 (14%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ +R+H F+ ++ ++ L+ GL +G++P++K+++ ++ S W++++ G+ GA
Sbjct: 23 LEKRHHAFQPTTYAETREQALEVGAGLASLGIRPKDKVAILAEGSNGWIISELGIFYAGA 82
Query: 101 INVVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
I+V + S +LL H+E AL V + +I + II+L
Sbjct: 83 ISVPLSVKLEESNDLLFRLRHAEVKALFVSKQQ-LPKIRRIRAELPELEQIIVLG----- 136
Query: 160 VAPDIVEEIPVFS----YDEIIDLGRE----SRKAFSDSNDARKHYKYETIGSDDIATYV 211
IP+ S Y + LGR+ ++ F A I +DD AT
Sbjct: 137 -------HIPLESGETAYGMLKRLGRDYLAGHKEEFLKIGQA--------IRNDDYATIT 181
Query: 212 YTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF--- 268
YTSGTT +PKGV+LTH+N + + + + L +LP H + G++I
Sbjct: 182 YTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSYRTLIILPLDHCFAHVVGFYIMIAC 241
Query: 269 -------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 321
G M T ++N+ +++ +P++++SVP L +K I TS A+
Sbjct: 242 GASVATVQIGATPMET-LKNIPQNIREVKPNFLLSVP----ALAKNFRKNIETSIRAKGP 296
Query: 322 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 381
L + TA+ +G+ + W RI+ A P+ L + +
Sbjct: 297 FTERLFDFALR-TAYIYNQDGYHKGKG------------W---RILLA---PVVGLFDLV 337
Query: 382 VYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC-- 438
+++K++ A G S GGG+ L + F+ AIG+ + GYGL+E++PVI+ P
Sbjct: 338 LFRKVREAFGGSLEFFVGGGALLDSELQRFFYAIGIPMFQGYGLSEATPVISTNSPKYHW 397
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
+ GS G + ++KI+D E E LP G KG + +RG VM GY+KNP AT + +G
Sbjct: 398 HKFGSSGKILEPLDLKILDEEGRE-LPRGQKGEIVIRGENVMAGYWKNPDATAATV-RNG 455
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLI 557
WL+TGD+G+++ L + GR K ++ S GE P +EEA + +S I
Sbjct: 456 WLHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYSPEGMEEAIVDKSPFI 505
Query: 558 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 617
QI++ GAI+VP+++ A R + D E +L E+ ++ +
Sbjct: 506 DQIIIYNNQSPFTGAIVVPNRD-----ALRRELDARDIREGRAAAAADILGAEIDRYRAG 560
Query: 618 CSFQ--------IGPIHVVDEPFT 633
+ + +VDEPFT
Sbjct: 561 GPYAGEFPERWLPAGLAIVDEPFT 584
>gi|149907514|ref|ZP_01896261.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
gi|149809184|gb|EDM69113.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
Length = 595
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/549 (26%), Positives = 260/549 (47%), Gaps = 65/549 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+ L +G + + K+ + ++N W AD G+LA + V +++E+ +I +++
Sbjct: 46 AKALLFLGCEVQAKVGILANNRPEWSFADLGILAARCVTVPIYPTNTTEQTRYIVKNADI 105
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V E F++ E L + ++ II L + D+ E + I G ++
Sbjct: 106 DYLFVGGQEQFDKALELLATDD-LKLIIAL-----TDVIDLKGESNAMHFSAFIQQGNQA 159
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+DA + DD+ T +YTSGTTG PKGVML + N S ++
Sbjct: 160 -------SDAEFEQRLTDANMDDLVTLIYTSGTTGQPKGVMLDYTNFAAAFASHDKMIDV 212
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK---DDLQRYQPHYMISVPLV 300
D ++ LP HV ER +++ G + ++ + N K D + +P +++VP +
Sbjct: 213 SETDTSIAFLPLSHVLERTWSFYLMHSGAKNVH--LENPKLIIDVIAEVKPTLLVAVPRL 270
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE +YS I ++ ++SA ++ + ++ A+ F L + +QPS+
Sbjct: 271 YEKIYSTIHTRLESASAVKKALFGWATKVGLAH---------FKLVHSNQQPSF------ 315
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQ 419
WL ++ H LA++L++ K++ +G + + GG + I+ F+++IG+++Q
Sbjct: 316 WLASQ---------HKLADRLIFSKLRGILGGNTRFLPCGGAKVDPDINQFFQSIGIQIQ 366
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE++ + R T GS+G P+ E+KI D NE+L VR V
Sbjct: 367 AGYGMTETTATVCCHRGTGYDFGSIGLPLPDMEVKIGD--DNEIL---------VRSDTV 415
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GY+K P T++ DGWL TGD G I G +V+ R K+ + S G
Sbjct: 416 MKGYYKMPEETEKNF-IDGWLKTGDAGKIL----------ANGEVVMTERIKELMKTSNG 464
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P +E + I Q+ + + A+IVP + + A +++ + +EL
Sbjct: 465 KYIAPQLVEGTLNKDHFIDQVAIFADSRHFVSALIVPSFDALEEYANSINLQFSSKAELL 524
Query: 600 KEKTISLLY 608
+ I ++
Sbjct: 525 RHSHIVTMF 533
>gi|379729826|ref|YP_005322022.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
gi|378575437|gb|AFC24438.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
Length = 607
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 274/597 (45%), Gaps = 78/597 (13%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRS 109
+ KL + + + GL +G+KP +K++L S +N W + D GM G INV
Sbjct: 35 YSTEKLLELVNKVSWGLLQMGMKPGDKIALISYNNRPEWNIMDLGMQQIGVINVPVYPTI 94
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
S ++ ++I+N + V + + +++ + DI
Sbjct: 95 SPDDYVYIFNDATIKYAVVGHGDLLDKV--------------------RTAQSDIPSLQA 134
Query: 170 VFSYDEIIDLGR-----------ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
+F++DE G+ E + + D + +K + I ++D+AT +YTSGTTG
Sbjct: 135 IFTFDEADAQGQVDANGQEVSFWEHIWGENPNMDIIQAHK-DKIKAEDLATIIYTSGTTG 193
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
PKGVML+H N+ +R + +P + D LS LP HV+ER Y ++G ++ Y
Sbjct: 194 KPKGVMLSHNNIATNVRDVLPFIPLQPQDIALSFLPLCHVFERTVTYSYMAKGAQIFYAK 253
Query: 279 -VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
+ L + LQ +PH+ +VP + E +Y + ++ + + + ++ Y
Sbjct: 254 DLDTLSETLQDVRPHFFTTVPRLLEKVYEKMMLKVQAEGGLKEKIFNWALGLTEKYD--- 310
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG- 396
DW A + AI W +A+KLV+ K++ +G G
Sbjct: 311 ---------------------FDWQ-AAGLEAIKWK---IADKLVFSKVRDRLGGRLKGI 345
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIK 454
V+G + P + + A+GV ++ GYGLTE+SP I+ P ++GSVG + ++K
Sbjct: 346 VTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFEPYQAMIGSVGPILPSVQVK 405
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I ++ +G V V+G+ VM GY++ T + +E+GW TGDIG I
Sbjct: 406 IDQDDSY----GPGEGEVLVKGNSVMMGYYRKEDKTAEVFNEEGWFLTGDIGKIV----- 456
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
+++ L + R K+ + S G+ V P +E L+ Q++V+G+ ++ A+I
Sbjct: 457 -ENKKGIKFLKITDRKKELLKTSGGKYVAPTPIESTLKEDLLVEQVMVVGEKRKFVSALI 515
Query: 575 VPDKEEVLMAAKRLSIVHADASE-LSKEKTISLLYGELRKWTSKCSF--QIGPIHVV 628
P+ E + + +I E L+ K ++ + ++ + S QI H+V
Sbjct: 516 QPNFESLKNWCQDKNITWTKPEEVLANPKVLAYFQAVVNRYNPRFSKVEQIKKFHLV 572
>gi|345865361|ref|ZP_08817547.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345123530|gb|EGW53424.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 593
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 171/618 (27%), Positives = 275/618 (44%), Gaps = 81/618 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
F+ R DA A I R R+ + + E+ + L+ +KP ++++L
Sbjct: 18 FQQRLRRSPDATAY-IEYDREQQRWIKYSWRETAAEVARWQAALQREKLKPGDRIALMLR 76
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W + D G + V + E + +I + L +EN E + + +
Sbjct: 77 NCRHWSIYDLAAQGLGLVIVPIYTNDRPENIGYILQDAGVKLLLLENHEQWQSLQQIQHQ 136
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
A + I+ L +S EIP + R D+ KY+ +
Sbjct: 137 LAGLARIVTLQTVES--------EIP------------QPRLLHLDAWLPATAGKYQAVD 176
Query: 204 SDD--IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 261
D +AT VYTSGTTG PKGVML+H+N+L I + ++ + D FLS LP H ER
Sbjct: 177 LDTNALATIVYTSGTTGRPKGVMLSHRNILWDIEAGLKLIDVFSNDLFLSFLPLSHALER 236
Query: 262 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 319
GY++ G + Y ++ L +DLQ+ +P +I+VP ++E +Y+ + + +
Sbjct: 237 TVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPRIFERIYNKLMSALDEGPTLK 296
Query: 320 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 379
R + + ++ + +++ R P L WP L E
Sbjct: 297 RKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG---------------WP---LLE 331
Query: 380 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
+LV KK+Q +G + VSGG L I + +GV + GYGLTE+SP+IA
Sbjct: 332 RLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPILQGYGLTETSPIIAENTHAD 391
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
N+ SVG + E +I G ++VR VM GY+ NP AT + +D DG
Sbjct: 392 NIPDSVGLILPGIEARI-----------GENDELQVRSPTVMLGYWNNPQATAETIDPDG 440
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
WL+TGD I +H L + GR K+ IVL+ GE V P ++E L
Sbjct: 441 WLHTGDKVKIEQNH-----------LFITGRIKEIIVLANGEKVPPADMEMCIALDPLFE 489
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE--KTISLLYGELRKWTS 616
Q++VIG+ + A++V + ++ + + D + L+K + IS G +
Sbjct: 490 QVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-LNKRLLERISSHLGSFPGYA- 547
Query: 617 KCSFQIGPIHVVDEPFTV 634
QI + V+DEP+TV
Sbjct: 548 ----QIRRLAVIDEPWTV 561
>gi|229846920|ref|ZP_04467026.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
gi|229810004|gb|EEP45724.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
Length = 599
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 263/557 (47%), Gaps = 59/557 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I NH++ L V + E +++ E ++ I+ + KS++ + +++ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTI--QLQQDVLSCTWEN 154
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I+ G ++ N+ + + + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 155 FIETGSNIQQ-----NELTQRLNQKQLS--DLFTIIYTSGTTGEPKGVMLDYANLAHQLE 207
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYM 294
+ + + D LS LP H++ERA +I RG L Y N ++ L +P M
Sbjct: 208 THDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGTILCYLEDTNQVRSALTEIRPTLM 267
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 268 CAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRTNNK---- 314
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
+I +L LA+KLV K++ +G K GG L I LF+ A
Sbjct: 315 -----------VIPFLLKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHA 363
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 364 IGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL--------- 412
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKEL 462
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+++I +
Sbjct: 463 MKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQINIKYH 522
Query: 594 DASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 523 DRLELLKNSDILKMFEQ 539
>gi|37678678|ref|NP_933287.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
gi|37197418|dbj|BAC93258.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
Length = 616
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 265/577 (45%), Gaps = 67/577 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q+I + + L G++ ++K+++FS+N +W VAD L A+ V +++ + +I
Sbjct: 58 QQIDELSLALLAQGIEVQDKIAIFSNNMPQWTVADFAALQLRAVTVPIYPTNTAAQAAYI 117
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
+++ L V F+ + + I+ + S D+ E + I
Sbjct: 118 LQNADVKVLFVGEQPQFDAAVKIFDECEQLNLIVAM-----SDDIDLGEHHFAIHWKAFI 172
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
G++ +A + E +D+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 173 QQGQQEARA-------ELERRLEQANFEDLLTLIYTSGTTGQPKGVMLDYSNIAAQLEGH 225
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMIS 296
+ D L LP HV+ERA +++ +G Y ++D L +P M +
Sbjct: 226 DRRLSLTENDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCA 285
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP YE ++S I +++ + R+++ + + + + EG +QPS +
Sbjct: 286 VPRFYEKIFSAIHEKVSRAPLMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM- 335
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIG 415
L H LA+KLV K+++ +G + + GG L I F+ AIG
Sbjct: 336 --------------LKKAHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIG 381
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ V++GYG+TE++ I+ C S+G + ++KI E NE+L VR
Sbjct: 382 INVKLGYGMTETTATISCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VR 430
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+K P T++ DE G+L TGD G I H G L + R K+ +
Sbjct: 431 GPMVMRGYYKLPEETEKTFDEHGFLKTGDAGHIDEH----------GNLFITDRIKELMK 480
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 481 TSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDR 540
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 541 VELIKHHQVVEMLEKRVNDLQKELAKFEQVKKFKLLP 577
>gi|148827162|ref|YP_001291915.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
gi|148718404|gb|ABQ99531.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
Length = 599
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 264/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIKTGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L + I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLELAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSDILKMFEQ 539
>gi|311742143|ref|ZP_07715953.1| AMP-binding enzyme [Aeromicrobium marinum DSM 15272]
gi|311314636|gb|EFQ84543.1| AMP-binding enzyme [Aeromicrobium marinum DSM 15272]
Length = 614
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 159/586 (27%), Positives = 276/586 (47%), Gaps = 73/586 (12%)
Query: 40 RISRRNHRFRVFCESKLEQ---EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
RI+ R F ++ E Q A GL +GV+P +++++ S+N WL D G+
Sbjct: 18 RIAMREKSFGIWEEVTWAQYWERSTLVAHGLLALGVEPGDRIAVHSENRREWLYCDIGIT 77
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
+ A V + S E+LH+ S S L E+ E ++ + + + I+ L
Sbjct: 78 SVRAATVGLYPTNPSPEVLHVLRDSGSRVLFAEDQEQLDKALDVIDELPHLERIVYL--- 134
Query: 157 KSSVAPDIVE----EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
P ++ + + S++E + LG + R S D R E + D+AT VY
Sbjct: 135 ----EPRGIQGHYTDGRLLSWEEFVALGEQHRSQHPGSLDER----LEAVEPSDLATLVY 186
Query: 213 TSGTTGNPKGVMLTHKNLLH-----QIRSLYDIVPAENGDKFLSMLPPWHVYERA-CGYF 266
TSGTTG PKG MLT N+ Q +S + PA D LS LP HV ER +F
Sbjct: 187 TSGTTGPPKGAMLTQANITFVLDTLQGQSAFVSPPANEKDLVLSYLPLCHVAERVFTTWF 246
Query: 267 IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 325
+ G ++ + ++ ++ +L+ QP + VP ++E + +G+Q ++ +S +R
Sbjct: 247 NAAVGTQVNFAESIDTVQLNLREVQPTLVFGVPRIWEKIAAGVQVRMAGASRIKRA---- 302
Query: 326 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 385
Y + ++ T ++Q + V RI A+ W ++Y+
Sbjct: 303 ------NYAVWMKVASWIGRTLVERQGKHTVG------TRIAYAVGW-------VMLYRP 343
Query: 386 IQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 443
++ IG++K + G+ P+ ++ F+ +G+ + YG+TE+S + A +G+
Sbjct: 344 LRERIGLAKTRYAASGAAPISPEVLEFFMGLGLPMFEVYGMTENSAIATANMAGRVRVGT 403
Query: 444 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 503
VG P E++I D ET E+L R + GY+ NP AT +D DGWL+TG
Sbjct: 404 VGEPQPGAEVRI-DEETGEIL---------TRHAGTFAGYWNNPEATASTIDADGWLHTG 453
Query: 504 DIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 562
D+G W+ H L + R KD I+ + G+N+ P E+E + S +++ +V
Sbjct: 454 DVGTWVDGTH-----------LKITDRIKDIIITAGGKNISPSEIENSLKASPFVKEALV 502
Query: 563 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLL 607
IG ++ A+I + + V A+R I + +L +K + I+L+
Sbjct: 503 IGDRRKYLTALIGIELDTVGAWAQRRKIAYTTYRDLTTKPEVIALV 548
>gi|212715288|ref|ZP_03323416.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661745|gb|EEB22320.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 607
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/599 (25%), Positives = 278/599 (46%), Gaps = 87/599 (14%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ ++++ A+GL G+ +++FS W V D + A GA+NV S+ +
Sbjct: 54 EFHKDVIAAAKGLIAFGIAKGNAVTIFSTTRYEWGVLDFALAAIGAVNVPIYDTDSAAQA 113
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
I N S+ +N E F+R+ + +++ I++L S A +E + V D
Sbjct: 114 ERILNDSDVKLAIADNRERFDRLDSVIDRCPSLKHILML----DSNAMGALEGLGVTVSD 169
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E ++ + +++ +DD+AT VYTSG+TG PKG L+H+N +
Sbjct: 170 EELEA------------------RIDSVHADDLATIVYTSGSTGAPKGAELSHRNFISIT 211
Query: 235 RS----LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQR 288
R+ L++I+ E+ + L LP H + R Y + G+ + L DL+
Sbjct: 212 RAGSLALHEII-LEDHPRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRS 270
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
++P Y++ VP V+E +Y+ ++ R + A + ++ ++ E + +
Sbjct: 271 FEPTYLLGVPRVFEKVYNAASRKAGMGWKGRLFLKAA--EAARDWSHMQQAGEKPTMKQT 328
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 408
+ SY E VY+ ++ A+G V+ GG+ P+ +
Sbjct: 329 AEHLSY------------------------EASVYRTVRGALGPRIRYVACGGA-PLDVS 363
Query: 409 L--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
L F+ IG+ + GYG+TE++ AA R T NV+G+VG P + ++I D
Sbjct: 364 LAHFFNGIGLPMIQGYGMTETAAPFAANRVTDNVIGTVGQPAPGSSVRISD--------- 414
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G ++V+G V +GY P T +A EDGWL TGD+ I GR + +
Sbjct: 415 --DGELQVKGPNVFRGYHNLPEKTAEAFTEDGWLKTGDLASI---DDEGR-------ITI 462
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
GR KD I+ + G+NV P+ +E+ ++ ++ VV+G ++ GA++ D E +AA
Sbjct: 463 TGRKKDIIITAGGKNVSPIPMEQEIVKCPIVEHAVVVGDNRPFIGALVTLDLEG--LAAW 520
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 639
S+ + + L + T++ ++ E++K+ K + + V+D FT CL
Sbjct: 521 LPSVGLSADTPLDRIATVAAVHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|27364106|ref|NP_759634.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
gi|27360224|gb|AAO09161.1| Long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
Length = 601
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 265/577 (45%), Gaps = 67/577 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q+I + + L G++ ++K+++FS+N +W VAD L A+ V +++ + +I
Sbjct: 43 QQIDELSLALLAQGIEVQDKIAIFSNNMPQWTVADFAALQLRAVTVPIYPTNTAAQAAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
+++ L V F+ + + I+ + S D+ E + I
Sbjct: 103 LQNADVKVLFVGEQPQFDAAVKIFDECEQLNLIVAM-----SDDIDLGEHHFAIHWKAFI 157
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
G++ +A + E +D+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 158 QQGQQEARA-------ELERRLEQANFEDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGH 210
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMIS 296
+ D L LP HV+ERA +++ +G Y ++D L +P M +
Sbjct: 211 DRRLSLTENDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCA 270
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP YE ++S I +++ + R+++ + + + + EG +QPS +
Sbjct: 271 VPRFYEKIFSAIHEKVSRAPLMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM- 320
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIG 415
L H LA+KLV K+++ +G + + GG L I F+ AIG
Sbjct: 321 --------------LKKAHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIG 366
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ V++GYG+TE++ I+ C S+G + ++KI E NE+L VR
Sbjct: 367 INVKLGYGMTETTATISCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VR 415
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+K P T++ DE G+L TGD G I H G L + R K+ +
Sbjct: 416 GPMVMRGYYKLPEETEKTFDEHGFLKTGDAGHIDEH----------GNLFITDRIKELMK 465
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 466 TSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDR 525
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 526 VELIKHHQVVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|145629146|ref|ZP_01784945.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|145633445|ref|ZP_01789175.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145639710|ref|ZP_01795313.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148825717|ref|YP_001290470.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
gi|144978649|gb|EDJ88372.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|144986008|gb|EDJ92610.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145271267|gb|EDK11181.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148715877|gb|ABQ98087.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
Length = 599
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 265/560 (47%), Gaps = 62/560 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIKTGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGELR 612
D EL K I ++ ELR
Sbjct: 522 HDRLELLKNSDILKMF-ELR 540
>gi|256824009|ref|YP_003147969.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
gi|256687402|gb|ACV05204.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
Length = 606
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 260/575 (45%), Gaps = 78/575 (13%)
Query: 38 RIRISRRNHRFRVFCESKLEQEILD----FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQ 93
R+ ISRR + V S Q+ LD A GL GV+PE+++ L + W + D
Sbjct: 32 RVLISRRQGQSWVDLTS---QQFLDHVNSVARGLVAAGVEPEDRVVLMAKTRYEWALLDL 88
Query: 94 GMLATGAINVVRGSRSSSEELLHIYNHSE-SVALAVENPEFFNRIAETLCSKAAMRFIIL 152
+L+TGAI V SS+ +L I +S + AL + A + A ++ +
Sbjct: 89 AILSTGAIVVPVYETSSANQLAWIMENSRVTWALTESDALAATARAAADQAGAQLKGV-- 146
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
W + I D++I G E +A D + E +G + +AT +Y
Sbjct: 147 -WAMDAKTTEGI---------DQLIAGGAEVDQAEIDR-------RCEGLGRETLATLIY 189
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSR 270
TSGTTG PK ML H+ + ++ + Y +P E+ L LP HV+ R + +
Sbjct: 190 TSGTTGRPKACMLPHRAFIDEVTAAYQGLPELFEDDSSTLLFLPLAHVFGRMVHFAVIGA 249
Query: 271 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
G +T + + DL ++P ++++VP V+E +Y + T ++ A A
Sbjct: 250 GARTGHTDIARVAKDLPVFKPTFVLAVPRVFEKIYESAHLKA-TKGGKEKIFAAA----- 303
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
Q Y AL A + +L H L KLVY K+Q+A
Sbjct: 304 -----------------TQTAIDYSKALD----AGRVPLVLRAKHKLFTKLVYGKVQAAF 342
Query: 391 GISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G +SGG +L + ++ +GV + G+GLTE+S RP+ +G+VG P+
Sbjct: 343 GGELTWAISGGAALGERLGHYFRGMGVNIMEGWGLTETSAAATVNRPSMQKIGTVGVPLP 402
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
E ++ D +G ++VRG V GY NP T + L EDGW +TGD+G I
Sbjct: 403 GFEARLSD-----------EGEIQVRGGHVFAGYENNPEETAKVLAEDGWFSTGDLGEID 451
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
G L + GRAKD +V + G+NV P LE+ L+ + +V+G +
Sbjct: 452 DD----------GFLRIIGRAKDILVTAAGKNVAPGPLEDILRSHRLVSEAMVVGDGRPT 501
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 604
A+I D+E++ K ASEL++++ +
Sbjct: 502 VMALITLDEEQLPEWLKHHHREVVPASELTEDEQV 536
>gi|309750679|gb|ADO80663.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2866]
Length = 607
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 265/560 (47%), Gaps = 62/560 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 48 FQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 107
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 108 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 161
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 162 SFIKTGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 214
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 215 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 274
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 275 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 326 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 370
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 371 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 420
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 421 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 469
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 470 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 529
Query: 593 ADASELSKEKTISLLYGELR 612
D EL K I ++ ELR
Sbjct: 530 HDRLELLKNSDILKMF-ELR 548
>gi|417843442|ref|ZP_12489516.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
gi|341949585|gb|EGT76188.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
Length = 602
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 263/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E + ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCSQLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I+ G +++ +K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIETGSNAQQDELTQRLNQKQF-------SDLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 EAHDLSLNVTDRDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSTLTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + + QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFVEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSDILKMFEQ 539
>gi|451944815|ref|YP_007465451.1| acyl-CoA synthetase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451904202|gb|AGF73089.1| acyl-CoA synthetase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 610
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 256/548 (46%), Gaps = 73/548 (13%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
N+ + + EI + A+GL +GV+P ++++L S W + D + ATGA +V
Sbjct: 40 NYEWINVTAQEFRDEIYEVAKGLIAMGVEPGDRVALLSATRYEWSLLDFAIWATGAASVP 99
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA--P 162
SS ++ I S +V LA ++ET + M ++L +A P
Sbjct: 100 IYPSSSLTQIQWIIEDSGAV-LA---------LSETREHTSQMEHLVLQPDGTPQLAGSP 149
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
+ I + + L E R +DA + I +D+A+ VYTSGTTG PKG
Sbjct: 150 SRLRRILEINSSAVETLKFEGRAI----DDAEVDRRIAGIRHEDLASLVYTSGTTGKPKG 205
Query: 223 VMLTHKNLLHQIRSLYD------IVPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELM 275
+LTH+N +HQIR+L VP G + L+ LP HV RA + G +
Sbjct: 206 CILTHRNWIHQIRALLTHPIGAIAVP---GTRILTYLPMAHVLARAVSLAVVIGGATQSH 262
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
++ V L + QR +PH ++ VP V+E + ++AA + ++ A
Sbjct: 263 WSDVSTLTVEFQRTRPHMILGVPRVFEKV---------RNAAANKAADGGPLKAKIFERA 313
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 394
K E PS ++A AR L ++LVY K++SA+G + K
Sbjct: 314 EKTAVEYSKALDTPDGPSRVLA------AR---------RRLYDRLVYSKLKSAVGGAVK 358
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
++GG ++ + F+ +G+ V GYGLTE+ AA T +G+VG P+ K
Sbjct: 359 YCITGGSAMSPELRHFFRGVGLPVYEGYGLTETC-AAAAVDFTDVRIGTVGQPLGGYSAK 417
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I DA G + +RG V GY+ NP AT +ALD GW NTGD+G I
Sbjct: 418 INDA-----------GEICIRGEGVFAGYWNNPEATAEALDVGGWFNTGDLGEIDET--- 463
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G +++ GR KD IV + G+NV P LEE LI Q +V+G + GA++
Sbjct: 464 -------GHIIITGRKKDLIVTAGGKNVSPAPLEEKLASHPLISQALVVGDGKPFIGALV 516
Query: 575 VPDKEEVL 582
D++ +L
Sbjct: 517 TLDEDSLL 524
>gi|345877498|ref|ZP_08829243.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225466|gb|EGV51824.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 619
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 171/618 (27%), Positives = 275/618 (44%), Gaps = 81/618 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
F+ R DA A I R R+ + + E+ + L+ +KP ++++L
Sbjct: 44 FQQRLRRSPDATAY-IEYDREQQRWIKYSWRETAAEVARWQAALQREKLKPGDRIALMLR 102
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W + D G + V + E + +I + L +EN E + + +
Sbjct: 103 NCRHWSIYDLAAQGLGLVIVPIYTNDRPENIGYILQDAGVKLLLLENHEQWQSLQQIQHQ 162
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
A + I+ L +S EIP + R D+ KY+ +
Sbjct: 163 LAGLARIVTLQTVES--------EIP------------QPRLLHLDAWLPATAGKYQAVD 202
Query: 204 SDD--IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 261
D +AT VYTSGTTG PKGVML+H+N+L I + ++ + D FLS LP H ER
Sbjct: 203 LDTNALATIVYTSGTTGRPKGVMLSHRNILWDIEAGLKLIDVFSNDLFLSFLPLSHALER 262
Query: 262 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 319
GY++ G + Y ++ L +DLQ+ +P +I+VP ++E +Y+ + + +
Sbjct: 263 TVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPRIFERIYNKLMSALDEGPTLK 322
Query: 320 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 379
R + + ++ + +++ R P L WP L E
Sbjct: 323 RKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG---------------WP---LLE 357
Query: 380 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
+LV KK+Q +G + VSGG L I + +GV + GYGLTE+SP+IA
Sbjct: 358 RLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPILQGYGLTETSPIIAENTHAD 417
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
N+ SVG + E +I G ++VR VM GY+ NP AT + +D DG
Sbjct: 418 NIPDSVGLILPGIEARI-----------GENDELQVRSPTVMLGYWNNPQATAETIDPDG 466
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
WL+TGD I +H L + GR K+ IVL+ GE V P ++E L
Sbjct: 467 WLHTGDKVKIEQNH-----------LFITGRIKEIIVLANGEKVPPADMEMCIALDPLFE 515
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE--KTISLLYGELRKWTS 616
Q++VIG+ + A++V + ++ + + D + L+K + IS G +
Sbjct: 516 QVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-LNKRLLERISSHLGSFPGYA- 573
Query: 617 KCSFQIGPIHVVDEPFTV 634
QI + V+DEP+TV
Sbjct: 574 ----QIRRLAVIDEPWTV 587
>gi|417846422|ref|ZP_12492429.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
gi|341952560|gb|EGT79085.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
Length = 608
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 264/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 48 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 107
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 108 FILNHADVKILFVGDQEQYDQALEIAHHCPELQKIVAM---KSTIQ---LQQAPLSCTWE 161
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I+ G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 162 NFIETGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 214
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 215 ETHDLALNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 274
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 275 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 326 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 370
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 371 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--RENNEIL-------- 420
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 421 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 469
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 470 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 529
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 530 HDRLELLKNSEILKMFEQ 547
>gi|373467688|ref|ZP_09558982.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758409|gb|EHO47182.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
Length = 602
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 264/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIADISTLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPQLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I+ G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIETGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I +G L Y N ++ L +P
Sbjct: 207 ETHDLSLNVTDQDVSLSFLPFSHIFERAWAAYILHKGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K+ +G S K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLHQLLGGSIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADTKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSEILKMFEQ 539
>gi|158520331|ref|YP_001528201.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
gi|158509157|gb|ABW66124.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
Length = 597
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 165/577 (28%), Positives = 265/577 (45%), Gaps = 65/577 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+ L + V ++K+++ S +W++ D + + + V + + +I NHS++
Sbjct: 51 AKSLIALDVNKQDKVNILSYTCYQWVLCDMAIASCNGVTVGIYQSNLPHDCKYIINHSDA 110
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
V + E+ + +++ +R +IL GK + I S+DE + LG+
Sbjct: 111 VVIFAEDQKQLDKLLSIRADIPNIRKVILFKGKGTGDGWAI-------SFDEFLALGK-- 161
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
D D + + + G D A VYTSGTTG PKG +LTH NL +S +
Sbjct: 162 -----DVADEKLKERIDAAGPSDPAAIVYTSGTTGVPKGAVLTHDNLTFTAQSARECADI 216
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 302
GD LP HV+ R C YF G + ++ L DDL+ +P + SVP +YE
Sbjct: 217 HEGDNTFLFLPLAHVFARLCVYFSVLTGTCTTFARSIDTLVDDLKASEPDWFASVPRIYE 276
Query: 303 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 362
+Y+ ++ + + A+ +A + R +A T I + R KQP
Sbjct: 277 KVYA----KVISGAEAKGGLALKIFR--WACTVGNEISD----RRLNKQP---------- 316
Query: 363 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 421
I A + +A KLV+ K+Q+A+G + +SG L I F+ A V + G
Sbjct: 317 ----IPAGTAFKYKIATKLVFSKLQAALGGRVRWCISGAAPLNPDIAKFFHAADVLILEG 372
Query: 422 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 481
G++E++ R G VG P E KI AE EVL RG VM+
Sbjct: 373 LGMSENTSFTNVNRVDNYRFGWVGQPGPGIEQKI--AEDGEVL---------FRGRNVMK 421
Query: 482 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 541
Y+K P T + + DGW +TGD+G I G L + GR KD I+ + G+N
Sbjct: 422 EYYKMPEETAKTIAPDGWQSTGDLGEIDDQ----------GFLQITGRKKDLIITAGGKN 471
Query: 542 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SK 600
+ P +E S I Q+ VIG ++ A++V D E V A+ +I D ++L K
Sbjct: 472 IAPSAIEGVIATSKYIAQVTVIGDRRKYLTALVVMDPETVAEYAQSNNIAFTDINDLGQK 531
Query: 601 EKTISLLYGEL-RKWTSKCSFQ-IGPIHVVDEPFTVN 635
+ + L+ E+ K + SF+ I + +V E FT++
Sbjct: 532 PEILKLIETEVAEKNKAFASFENIKKVTIVPE-FTID 567
>gi|229527090|ref|ZP_04416485.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
gi|229335487|gb|EEO00969.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
Length = 601
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ + AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|319896424|ref|YP_004134617.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3031]
gi|317431926|emb|CBY80272.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3031]
Length = 599
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 264/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD +L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIAILQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIKTGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGKPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSDILKMFEQ 539
>gi|326333548|ref|ZP_08199788.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
gi|325948657|gb|EGD40757.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
Length = 597
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 239/526 (45%), Gaps = 75/526 (14%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
E+ A+GL GV ++++L S W + D + GA V SS+E++ I
Sbjct: 55 EVSAVAKGLIAAGVGAGDRVALLSKTRYEWTLIDYAIWFAGAATVPIYETSSAEQIEWIL 114
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
S +VA+ E+ RI+E S A+ + W + + D ++
Sbjct: 115 QDSAAVAIVAEDAGHIGRISEVRASCTALNNV---WSINDN------------AVDLLVK 159
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
LG +D D + + + +D AT +YTSGTTG PKG +LTH N + ++
Sbjct: 160 LG-------TDITDEQLEARRSAVTPEDAATLIYTSGTTGRPKGCVLTHGNFMFELGVAV 212
Query: 239 DIVPAE---NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYM 294
D + G L LP HV+ R L +T ++NL DL +QP ++
Sbjct: 213 DSLDGLFNIEGRSTLLFLPLAHVFARIIQIGCIKSRTRLGHTPDIKNLVADLGTFQPTFV 272
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
++VP V+E +Y+ +A+++ VA RI T Y T K P
Sbjct: 273 LAVPRVFEKVYN---------TASQKAVADGKGRIFDMATEVAIDYS--RATETGKAPLL 321
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEA 413
L A H L KLVY K+ +A+G + + +SGG L + FY
Sbjct: 322 LTAK----------------HKLFSKLVYGKLLAALGGNCSYAISGGAPLGDRLGHFYRG 365
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IGV V GYGLTE++ + P +G+VG P+ T +++ D G +
Sbjct: 366 IGVTVLEGYGLTETTAALTVNLPEAFKIGTVGRPLPGTSVRVAD-----------DGELL 414
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+G QV++ Y++NP+AT +A +DGW ++GD+G + G + + GR K+
Sbjct: 415 FKGGQVLKEYWQNPTATAEAKTDDGWFHSGDLGEVDDE----------GFVKITGRKKEI 464
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+V + G+NV P LE+ L+ Q +V+G Q GAI+ D E
Sbjct: 465 LVTAGGKNVAPAVLEDRLRAHVLVDQCIVVGDGQPFIGAIVTIDPE 510
>gi|260771297|ref|ZP_05880224.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
gi|260613894|gb|EEX39086.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
Length = 604
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 170/624 (27%), Positives = 287/624 (45%), Gaps = 75/624 (12%)
Query: 14 LSSLDYHRHGFRVFTRNCVDAVATRIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGV 72
+++LD+H R V +RI + + ++ ++ ++ +E+ + L G+
Sbjct: 1 MANLDFH---IVKRIREQVALGGSRIALKHQVDNEWQGISWTQFGEEMDAMSMALLAFGL 57
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAV-ENP 131
++K+ +FS+N +W +AD L A+ V +++E+ +I ++ L V E P
Sbjct: 58 DVQDKIGIFSNNMPQWTIADFAALQIRAVTVPIYPTNTAEQAAYILQDADVKVLFVGEQP 117
Query: 132 EFFNRIAETLCSKA-AMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+F A T+ + ++ I+ + S A + + S+ + LG + + D
Sbjct: 118 QF--DAAVTMFEQCDQLQLIVAM-----SDAIALGDCDFAMSWQAFVALGENTSREPLDE 170
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 250
+ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L
Sbjct: 171 -------RLEQANDDDLFTLIYTSGTTGKPKGVMLDYRNVGAQLEGHDQRLNLSQDDVSL 223
Query: 251 SMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LP HV+ERA +++ +G Y V ++D L + +P M +VP YE ++S I
Sbjct: 224 CFLPLSHVFERAWTFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIH 283
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
+++ + R+V+ F ++ C + ++ PS WA C
Sbjct: 284 EKVARAPLHRKVM--------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC- 324
Query: 370 ILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 428
H LA+KLV K++ +G + GG L I F+ AIG+ V++GYG+TE++
Sbjct: 325 -----HQLADKLVLSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETT 379
Query: 429 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 488
I+ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 380 ATISCWDDQCFDPDSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPE 428
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
T Q DE G+L TGD G I G L + R K+ + S G+ + P +E
Sbjct: 429 ETAQTFDEHGFLKTGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIE 478
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-------- 600
A + + QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 479 GAIGKDHFVEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMF 538
Query: 601 EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L L K+ F++ P
Sbjct: 539 EKRVNELQHGLAKFEQVKRFKLLP 562
>gi|15642480|ref|NP_232113.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590764|ref|ZP_01678094.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121729013|ref|ZP_01682015.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|147675212|ref|YP_001217984.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|153819335|ref|ZP_01972002.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|153822876|ref|ZP_01975543.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|227082604|ref|YP_002811155.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227118925|ref|YP_002820821.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229507458|ref|ZP_04396963.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229512347|ref|ZP_04401826.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229519483|ref|ZP_04408926.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229606963|ref|YP_002877611.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254849608|ref|ZP_05238958.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255746847|ref|ZP_05420792.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262162012|ref|ZP_06031028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|262167313|ref|ZP_06035023.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|298500161|ref|ZP_07009966.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360036356|ref|YP_004938119.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742270|ref|YP_005334239.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|417814498|ref|ZP_12461151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|417818238|ref|ZP_12464866.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|418335481|ref|ZP_12944390.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|418339446|ref|ZP_12948336.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|418347017|ref|ZP_12951770.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|418350773|ref|ZP_12955504.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|418356029|ref|ZP_12958748.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|419827426|ref|ZP_14350925.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|421317974|ref|ZP_15768542.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|421322231|ref|ZP_15772783.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|421326029|ref|ZP_15776553.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|421329687|ref|ZP_15780197.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|421333643|ref|ZP_15784120.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|421337185|ref|ZP_15787646.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|421340612|ref|ZP_15791044.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|421348160|ref|ZP_15798537.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|422897573|ref|ZP_16935012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|422903772|ref|ZP_16938736.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|422907656|ref|ZP_16942449.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|422914496|ref|ZP_16949000.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|422926700|ref|ZP_16959712.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|423146023|ref|ZP_17133616.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|423150699|ref|ZP_17138012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|423154533|ref|ZP_17141697.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|423157601|ref|ZP_17144693.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|423161173|ref|ZP_17148111.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|423166002|ref|ZP_17152721.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|423732032|ref|ZP_17705333.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|423771758|ref|ZP_17713598.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|423896810|ref|ZP_17727642.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|423932013|ref|ZP_17732035.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|424003448|ref|ZP_17746522.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|424007242|ref|ZP_17750211.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|424025222|ref|ZP_17764871.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|424028108|ref|ZP_17767709.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|424587389|ref|ZP_18026967.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|424596043|ref|ZP_18035361.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|424599952|ref|ZP_18039130.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|424602714|ref|ZP_18041853.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|424607648|ref|ZP_18046588.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|424611464|ref|ZP_18050302.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|424614292|ref|ZP_18053076.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|424618259|ref|ZP_18056929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|424623045|ref|ZP_18061548.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|424646005|ref|ZP_18083739.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|424653772|ref|ZP_18091151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|424657593|ref|ZP_18094877.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|440710708|ref|ZP_20891356.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443504822|ref|ZP_21071774.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443508728|ref|ZP_21075483.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443512566|ref|ZP_21079199.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443516125|ref|ZP_21082630.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443519918|ref|ZP_21086305.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443524810|ref|ZP_21091013.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443532394|ref|ZP_21098408.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443536208|ref|ZP_21102075.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443539737|ref|ZP_21105590.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|449055077|ref|ZP_21733745.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
gi|9657064|gb|AAF95626.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547405|gb|EAX57518.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121628695|gb|EAX61165.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|126510116|gb|EAZ72710.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|126519613|gb|EAZ76836.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|146317095|gb|ABQ21634.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|227010492|gb|ACP06704.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227014375|gb|ACP10585.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229344172|gb|EEO09147.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229352312|gb|EEO17253.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229354963|gb|EEO19884.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229369618|gb|ACQ60041.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254845313|gb|EET23727.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255735249|gb|EET90649.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262024288|gb|EEY42979.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|262028261|gb|EEY46918.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|297540854|gb|EFH76908.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340035834|gb|EGQ96812.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|340036984|gb|EGQ97960.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|341619829|gb|EGS45631.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|341619946|gb|EGS45733.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|341620751|gb|EGS46517.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|341636308|gb|EGS61010.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|341645701|gb|EGS69830.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|356416516|gb|EHH70147.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|356416913|gb|EHH70534.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|356422267|gb|EHH75750.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|356427738|gb|EHH80979.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|356428406|gb|EHH81633.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|356429545|gb|EHH82761.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|356439071|gb|EHH92071.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|356443666|gb|EHH96485.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|356445269|gb|EHH98078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|356449593|gb|EHI02339.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|356452527|gb|EHI05206.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|356647510|gb|AET27565.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795780|gb|AFC59251.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|395916232|gb|EJH27062.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|395917867|gb|EJH28695.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|395917971|gb|EJH28798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|395928221|gb|EJH38984.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|395929045|gb|EJH39798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|395932284|gb|EJH43028.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|395939895|gb|EJH50577.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|395942739|gb|EJH53415.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|395957678|gb|EJH68210.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|395958149|gb|EJH68652.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|395960785|gb|EJH71145.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|395970073|gb|EJH79884.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|395971996|gb|EJH81620.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|395974400|gb|EJH83929.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|408006131|gb|EKG44307.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|408010593|gb|EKG48446.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|408030465|gb|EKG67126.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|408040591|gb|EKG76766.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|408041889|gb|EKG77976.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|408051829|gb|EKG86905.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|408608216|gb|EKK81619.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|408622477|gb|EKK95461.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|408632827|gb|EKL05258.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|408653605|gb|EKL24767.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|408654098|gb|EKL25241.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|408844341|gb|EKL84473.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|408845097|gb|EKL85218.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|408869573|gb|EKM08869.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|408878384|gb|EKM17394.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|439974037|gb|ELP50241.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443430901|gb|ELS73459.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443434731|gb|ELS80883.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443438624|gb|ELS88344.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443442661|gb|ELS95969.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443446442|gb|ELT03107.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443449263|gb|ELT09564.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443457784|gb|ELT25181.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443460711|gb|ELT31795.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443464867|gb|ELT39528.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|448265119|gb|EMB02354.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 601
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|229524469|ref|ZP_04413874.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
gi|229338050|gb|EEO03067.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
Length = 601
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 274/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A ++ + +Y DD+ T++YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANY-------DDLFTFIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ + AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|254226261|ref|ZP_04919854.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
gi|125621234|gb|EAZ49575.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
Length = 601
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 157/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQATYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H LA+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQLADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|229521309|ref|ZP_04410729.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|421355168|ref|ZP_15805500.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
gi|229341841|gb|EEO06843.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|395954293|gb|EJH64906.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
Length = 601
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ + AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|397689621|ref|YP_006526875.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
gi|395811113|gb|AFN73862.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
Length = 636
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 154/588 (26%), Positives = 277/588 (47%), Gaps = 59/588 (10%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
+N ++ + ++ + FA GL +G+ ++L+L S+ W++++ G+L GA+NV
Sbjct: 26 KNGKYEALTYDEAKKYVYYFAAGLISLGINKGDRLALISEGRNFWVISELGILYAGAVNV 85
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
+ L +AV + ++I + I+L D
Sbjct: 86 PISVKIDELNDLKFRLDHSGTRIAVVSASQLHKIRGIKNDLPELEKTIVL-----DKIDD 140
Query: 164 IVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
+ E+ ++++ G E KA + R +++ +D A YTSGTT +PKG+
Sbjct: 141 LQED--ELCVEDLLKTGEEFLKAKGNILIER----MQSVKENDYANICYTSGTTADPKGI 194
Query: 224 MLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRG-----IELMYT 277
+L+H+N + ++P L +LP H + G Y + G +E T
Sbjct: 195 VLSHRNYTANVEQATSLLPIPEWYTTLLILPWDHAFAHTAGIYTLMYNGASMAAVETGRT 254
Query: 278 AVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+ LK+ +++ +P +++SVP + + I+K I + + +++++ Y
Sbjct: 255 PLETLKNIPKNIKEIKPTFLLSVPALAKNFRKNIEKGIREKGKRIEQLFNSALKLAYNYN 314
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
A EG+ +++ +L PL+ L +K+++ KI+ G
Sbjct: 315 A-----EGWNRGNGKRK------------------LLKPLYKLYDKILFSKIRENFGGRL 351
Query: 395 AGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
GGG+L + + F+ AIG+ + GYGLTE++P+I+A P + LGS G +++ E+
Sbjct: 352 EFFIGGGALLDIELQRFFYAIGIPMFQGYGLTEAAPIISANVPAKHKLGSSGRIVDNLEV 411
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
KI D+ +E LPAG KG + VRG VM GY+KN AT + + +DGWL +GD+G++
Sbjct: 412 KICDSNGSE-LPAGQKGEIVVRGENVMVGYWKNEKATAETI-KDGWLYSGDLGYLDED-- 467
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS-LIRQIVVIGQDQRRPGA 572
G L + GR K ++ S GE P +EEA +S I Q+++ A
Sbjct: 468 --------GFLYVLGRFKSLLIASDGEKYSPEGIEEALTENSKFIEQVMLYNNQSPYTIA 519
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 620
+IVP+KE++ ++ H SE + I L+ E+ K+ F
Sbjct: 520 LIVPNKEQIKRFLDENNLSH--KSEEGQNAVIKLIDEEISKFKQGGQF 565
>gi|262404795|ref|ZP_06081350.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
gi|262349827|gb|EEY98965.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
Length = 601
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 268/567 (47%), Gaps = 73/567 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES-VALAVE 129
G+ ++K+++FS+N RW +AD L A+ V ++ E+ +I ++++ V E
Sbjct: 56 GIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGE 115
Query: 130 NPEFFNRIAE-TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFS 188
P+F +++ C + +R I+ + + D+ + +D+ + +
Sbjct: 116 QPQFDAALSQFEQCPE--LRLIVAM-----NANIDLKQADCAMHWDDFVTQHQ------- 161
Query: 189 DSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 247
+ D + ++ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D
Sbjct: 162 -TQDHTQLFELIEQANFDDLFTLIYTSGTTGTPKGVMLDYRNIGSQLEGHDQRLNLNEED 220
Query: 248 KFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 306
L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVAHVRDALGEVRPTVMCAVPRFYEKIFS 280
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
I +++ + R+V+ F + C + Q QPS+L+A
Sbjct: 281 AIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQHQPSWLLA--------- 322
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 425
H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 323 ------QSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E++ I+ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 377 ETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYK 425
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
T ++ DE G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 426 LEKETSESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQ 475
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 600
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 476 VIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVL 535
Query: 601 ---EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 536 EMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|441516134|ref|ZP_20997885.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441457005|dbj|GAC55846.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 603
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 244/530 (46%), Gaps = 73/530 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q + D A+GL G+ ++++L S W + D + +TGA V SS ++ I
Sbjct: 54 QRVRDLAKGLIASGINVGDRVALMSATRLEWTLLDFAIWSTGATPVPIYDSSSGPQIDWI 113
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
S +VA+ VEN + E AA + + P ++E++
Sbjct: 114 MEDSAAVAIIVENEGKRKLLDEVSHVTAATTVFTI----DQTDGPGLIEQL--------- 160
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+A ++ DA + ++ +D AT +YTSGTTG PKGVML H NLL ++ +
Sbjct: 161 ------TQAGTEVTDAELEARRRSLRADSPATLIYTSGTTGRPKGVMLYHSNLLGEVGGV 214
Query: 238 YDIVPAE---NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHY 293
D A+ G + L LP HV R G+ + YTA + NL + ++P
Sbjct: 215 LDSSLADLLGPGKRLLLFLPMAHVLARGVNLIAIEAGVAVGYTADIANLLPTFEVFRPSL 274
Query: 294 MISVPLVYETLYSGIQKQIFTSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
++SVP V+E +Y+ +++ + S + ++ RA A TA +
Sbjct: 275 ILSVPRVFEKVYNSARQKAYDDSPVKGKIFDRA------ATTAIQ--------------- 313
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
Y AL D + +L H L ++LVY K+ +A+G + +SGG L + F+
Sbjct: 314 -YSKALDDG----SVGKVLQLRHKLYDRLVYSKLTAALGGQCELAISGGAPLGARLGHFF 368
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+G+ V GYGLTE++ I P +G+VG PI ++I G
Sbjct: 369 RGVGIPVYEGYGLTETTAAITVNTPAEVRMGTVGRPIPGNAVRIA-----------PDGE 417
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V + G+ V GY++N AT +A+ DGW +TGD+G S G L + GR K
Sbjct: 418 VMLNGAVVFGGYWRNDEATAEAI-TDGWFHTGDLG----------SLDEDGFLRITGRKK 466
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
+ IV + G+NV P LE+ +I Q +V+G + G +I D E++
Sbjct: 467 EIIVTAGGKNVSPAPLEDIMRAHPMISQAMVVGDKEPFIGTLITLDAEQI 516
>gi|452963530|gb|EME68596.1| AMP-dependent synthetase and ligase [Magnetospirillum sp. SO-1]
Length = 608
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/517 (30%), Positives = 242/517 (46%), Gaps = 78/517 (15%)
Query: 76 EKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFN 135
+++ L ++N W +AD G++A G I+V + ++ + LHI +S + + V
Sbjct: 64 DRVMLVAENRPEWAIADLGIMAAGGISVPAYTTNTVADHLHILENSGARLVIVSTRALAE 123
Query: 136 RIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESR---KAFSDSND 192
R+ II++ + +P + + +D ++++G +A D
Sbjct: 124 RVLPAAARSDHAPAIIVMEPLSLAQSPGV----DIHGWDAVLEMGGGGGAGIRALVAGLD 179
Query: 193 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKF 249
R D A +YTSGT G PKGVML+H +L D++ EN + F
Sbjct: 180 RR-----------DTACLIYTSGTGGVPKGVMLSHGAILCNCMGATDVLRELGLEN-EVF 227
Query: 250 LSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 307
LS LP H YE G +F S G E+ Y + L ++ P M +VP +YET+ +
Sbjct: 228 LSFLPLSHAYEHTAGLHFPISIGAEIRYAEGIEMLAANMAEVSPTIMTAVPRLYETMRTR 287
Query: 308 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 367
I K + S RR + A + + +R+ L AR+
Sbjct: 288 ILKGLARVSPLRRRLFMAALDLGTRRLKGQRL---------------------GLIARLA 326
Query: 368 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
+L E+LV K+++ G KA VSGG LP + F+ A+GV++ GYG TE
Sbjct: 327 DLVL-------ERLVRDKVRARFGGRLKAFVSGGAPLPYEVGAFFVALGVRILQGYGQTE 379
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
++PVIA RP N L +VG + E++I G + VRG VMQGY+++
Sbjct: 380 AAPVIAVNRPGHNRLETVGPAMPGVELRIA-----------GDGEILVRGELVMQGYWRD 428
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
AT QA+D +GWL+TGDIG + P G L + R KD IV S G+NV P
Sbjct: 429 APATAQAIDSEGWLHTGDIGEVDPD----------GCLRITDRKKDIIVNSGGDNVAPQR 478
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKEEV 581
+E + I Q +V G RRP A+IVPD++ V
Sbjct: 479 IESFLTLEAEIAQAMVYG--DRRPHLVALIVPDRDWV 513
>gi|145595792|ref|YP_001160089.1| AMP-dependent synthetase and ligase [Salinispora tropica CNB-440]
gi|145305129|gb|ABP55711.1| AMP-dependent synthetase and ligase [Salinispora tropica CNB-440]
Length = 599
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 242/546 (44%), Gaps = 76/546 (13%)
Query: 39 IRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT 98
IR V C + E++ A GL GV+P +++ L S W + D + A
Sbjct: 36 IRAGADGASTDVTCR-QFRDEVVAVARGLVAAGVRPGDRVGLMSRTRYEWTLFDYAVWAA 94
Query: 99 GAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS 158
GA+ V SS E+ I + S +VA+ VE +A + + W
Sbjct: 95 GAVTVPIYETSSPEQAAWILSDSGAVAVLVETDAHAALVAGVRDRTPELTNV---W---- 147
Query: 159 SVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
+I + + DE++ G + A H +DD+AT VYTSGTTG
Sbjct: 148 --------QIDLGALDELVTAGESVDPTEIEQRRAAVH-------ADDLATLVYTSGTTG 192
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIF-SRGIELM 275
PKG MLTH+++L + + ++P G L LP H + R + +R
Sbjct: 193 RPKGCMLTHRSMLADVANAVPVLPNLFGPGASTLLFLPLAHAFARLIQVGVVQARATMAH 252
Query: 276 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
+L LQ +P +++SVP V+E +Y+ KQ +S R+ ARA ++ AY+
Sbjct: 253 CPDTNDLLSRLQTVRPTFVLSVPRVFEKVYNS-AKQKADASGKGRIFARAEA-VAIAYSE 310
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG--IS 393
G L + H L ++LVY+K+++A+G S
Sbjct: 311 SLETSSGPGLALRVQ------------------------HALFDRLVYRKLRAALGGRCS 346
Query: 394 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
A +SGG L + F+ +GV + GYGLTE+SP +A P +GSVG P+ I
Sbjct: 347 DA-ISGGAPLGARLGHFFRGVGVVIYEGYGLTETSPAASANLPDAIRIGSVGRPLPGVTI 405
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
+I D G V + G V +GY++N +A+ L DGW TGD+G +
Sbjct: 406 RIDD-----------DGEVLIAGDLVFKGYWRNEAASADVLTADGWFRTGDLGQL----- 449
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G L + GR K+ IV + G+NV P LE+ ++ Q VVIG Q A+
Sbjct: 450 -----DSDGYLRITGRKKEIIVTAGGKNVAPAVLEDQVRAHPMVSQCVVIGDRQPFVAAL 504
Query: 574 IVPDKE 579
+ D+E
Sbjct: 505 VTVDEE 510
>gi|153826974|ref|ZP_01979641.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
gi|149739172|gb|EDM53454.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
Length = 601
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ + AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|91227124|ref|ZP_01261608.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91188776|gb|EAS75063.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 602
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 158/586 (26%), Positives = 273/586 (46%), Gaps = 77/586 (13%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q++ + L G+ ++K+ +FS+N +W +AD L ++ V +++ +
Sbjct: 39 TQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADIAALQLRSVTVPIYPTNTAAQ 98
Query: 114 LLHIYNHSESVALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+I N+++ L V E P+F ++ I ++ + + ++I +
Sbjct: 99 SAYIINNADVKVLFVGEQPQFDAAVS------------IFDQCEQLELIVAMSDDIELGD 146
Query: 173 YDEIIDLGRESRKAFSDSNDARKHY----KYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
+D +I S +AF DA + + DD+ T +YTSGTTG PKGVML +
Sbjct: 147 HDFVI-----SWQAFVAKGDATYQVELDARLDQAKEDDLLTLIYTSGTTGQPKGVMLDYA 201
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 287
N+ Q+ + D L LP HV+ERA +++ +G Y ++D L
Sbjct: 202 NIAAQLEGHDQRLSLSQSDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALS 261
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+ +P M +VP YE ++S I +++ + R+++ + + A C +
Sbjct: 262 QVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIMFTWAVNMGAKMAA--------C-HQ 312
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 406
++QPS L L + LA+KLV K+++ +G + GG L
Sbjct: 313 EKRQPSLL---------------LRKSYALADKLVLSKLRALLGGQINFMPCGGAKLDET 357
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL-- 413
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
VRG VM+GY+K P T++ DE G+L TGD G+I + G L +
Sbjct: 414 -------VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFI 456
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAK 516
Query: 587 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRVELIKHHQVVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|16271978|ref|NP_438175.1| long chain fatty acid CoA ligase [Haemophilus influenzae Rd KW20]
gi|260580694|ref|ZP_05848521.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
gi|1170730|sp|P44446.1|LCFH_HAEIN RecName: Full=Putative long-chain-fatty-acid--CoA ligase; AltName:
Full=Long-chain acyl-CoA synthetase; Short=LACS
gi|1572946|gb|AAC21681.1| long chain fatty acid coA ligase, putative [Haemophilus influenzae
Rd KW20]
gi|260092756|gb|EEW76692.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
Length = 607
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 154/556 (27%), Positives = 261/556 (46%), Gaps = 61/556 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW + D L AI V + +++++
Sbjct: 48 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIVDIATLQIRAITVPIYATNTAQQAE 107
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 108 FILNHADVKILFVGDQEQYDQTLEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 161
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 162 SFIKTGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 214
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 215 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 274
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + Y F L N K
Sbjct: 275 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKY---------FDLRANNKAIP 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 326 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 370
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 371 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 420
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 421 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 469
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 470 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 529
Query: 593 ADASELSKEKTISLLY 608
D EL K I ++
Sbjct: 530 HDRLELLKNSDILKMF 545
>gi|386265628|ref|YP_005829120.1| long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)
(LACS) [Haemophilus influenzae R2846]
gi|309972864|gb|ADO96065.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2846]
Length = 607
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 264/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V S +++++
Sbjct: 48 FQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYSTNTAQQAE 107
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 108 FILNHADVKILFVGDQEQYDQALEIAHHYPKLQKIVAM---KSTIQ---LQQDPLSCTWE 161
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I+ G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 162 SFIETGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 214
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 215 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 274
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 275 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWTISVGQKH---------FDLRANNKAIP 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 326 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 370
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 371 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 420
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA +DG+L TGD G G L + R K+
Sbjct: 421 -VRGKMVMKGYYKKPEETAQAFTKDGFLKTGDAGEFDEQ----------GNLFITDRIKE 469
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+++I +
Sbjct: 470 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQINIKY 529
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 530 HDRLELLKNSDILKMFEQ 547
>gi|296269285|ref|YP_003651917.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092072|gb|ADG88024.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 593
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 160/566 (28%), Positives = 259/566 (45%), Gaps = 89/566 (15%)
Query: 26 VFTRNC--VDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
VF R +AV R + + R+ ++ ++ A+GL G++P ++++L S
Sbjct: 22 VFQRAADEPNAVVIRRKADETSDRWVPVTAAEFRDQVAALAKGLIAAGIEPGDRVALMSR 81
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
W + D + A G + V SS+E++ I + S + A+ VE + E
Sbjct: 82 TRYEWTLVDYAIWAAGGVGVPIYETSSAEQVKWILSDSGAKAIVVEQEHHEQTVRE---- 137
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
AM L+W I D + + G+E SD A + G
Sbjct: 138 --AMPDFPLIW------------RIEGGGLDRLAEQGKE----VSDETLAERRTSR---G 176
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS--------LYDIVPAENGDKFLSMLPP 255
D+AT +YTSGTTG PKG LTH NLL R+ L+++ G L LP
Sbjct: 177 GPDLATIIYTSGTTGLPKGCRLTHDNLLFTARNVTQGPLSRLFEV----EGRSALLFLPL 232
Query: 256 WHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 314
H R + + +T ++N+ DLQ +P ++++VP V+E +Y+ +++
Sbjct: 233 AHSLARLIQVALLETKTIIAHTPNIKNVAPDLQSSKPTFLLAVPRVFEKVYNAAEQK--A 290
Query: 315 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 374
+ + + A + + AY+ + + G L RI AI
Sbjct: 291 TEEGKGKIFHAAVATAIAYS--RELDSGGPR----------------LGTRIKHAIF--- 329
Query: 375 HLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 433
+KLVY+K+++A G + VSGG +L + F+ IG++V GYGLTE+S
Sbjct: 330 ----DKLVYRKLRAATGGALTAAVSGGSALGERLGHFFRGIGIEVLEGYGLTETSAPSTV 385
Query: 434 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 493
P N +G+VG P ++I D G + ++G V +GY+ N ATK+A
Sbjct: 386 NIPGANKIGTVGKPFPGVSVRIAD-----------DGEILIKGRHVFEGYWNNERATKEA 434
Query: 494 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 553
+DE+GW +TGDIG + G L + GR K+ IV + G+NV P LE+A
Sbjct: 435 IDEEGWFHTGDIGELDED----------GYLRITGRKKEIIVTAGGKNVAPAPLEDAIRA 484
Query: 554 SSLIRQIVVIGQDQRRPGAIIVPDKE 579
L+ Q++V+G ++ GA+I D E
Sbjct: 485 HRLVSQVMVVGDNRPFIGALITLDPE 510
>gi|354596150|ref|ZP_09014167.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
gi|353674085|gb|EHD20118.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
Length = 607
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 266/579 (45%), Gaps = 65/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A L G+ +E+ ++FS NS W + D ML AI+V + +++ + I N ++
Sbjct: 57 ASALLAQGLDVQERAAIFSHNSLNWSLVDLAMLHLRAISVPIYATNTAAQAAFIINDADI 116
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ V F+ + + +R II++ DI + F + R+
Sbjct: 117 RTIFVGGQAQFDALLALRETCPQLRNIIVMDDGVDLRGCDIAVTLREFEAQAVDAFWRDE 176
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VP 242
+ D D +D+ T +YTSGTTG PKGVML + N+ Q++ L+D+ +
Sbjct: 177 LQKRIDGRDL-----------NDLFTLIYTSGTTGEPKGVMLDYANMAMQLK-LHDLRLR 224
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVY 301
D L LP HV+ERA +FI G + +Y NL + +Q +P M +VP Y
Sbjct: 225 VTETDISLCFLPLSHVFERAWSFFIMHSGAQNVYLNDTNLVRAAMQAVKPTMMCAVPRFY 284
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +YS I ++ + R+ + +A +R+ F L R K P
Sbjct: 285 EKVYSAIYEKAAQAPWYRQRL------FHWAVAQGRRV---FLLRRAGKHPG-------- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 420
W R+ +H A++LV K++ +G + + G L +I LF++++G+++
Sbjct: 328 AWRRL-------MHRYADRLVLGKLRQLLGGQIRFLPAAGARLDDNIILFFQSMGIRIVY 380
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYG+TE+ ++ LGS+G P+ E++I G+ ++VRG+ VM
Sbjct: 381 GYGMTETCATVSCWEEENFRLGSIGTPLPEIEVRI-----------GADNEIQVRGATVM 429
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GYF P T A DGWL TGD G + G L + R KD + S G+
Sbjct: 430 RGYFHRPQETADAFTADGWLKTGDAGELDAQ----------GNLFITERLKDLMKTSGGK 479
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
+ P LE + I Q+ VI ++ A+IVP E + A+ +++ + D EL +
Sbjct: 480 YIAPQHLEGTLGQDRFIEQVAVIADARKYVSALIVPCFEALEEHARSINLKYHDRLELLR 539
Query: 601 EKTISLLYG----ELRKWTSKCSFQIGPIHVVDEPFTVN 635
I L+ E++K S+ Q+ ++ PF+++
Sbjct: 540 HSHIIELFEQRLREIQKELSRVE-QVKKFTLLPAPFSMD 577
>gi|229514108|ref|ZP_04403570.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
gi|229349289|gb|EEO14246.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
Length = 601
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDERLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|417321242|ref|ZP_12107782.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328471922|gb|EGF42799.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 602
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 263/583 (45%), Gaps = 79/583 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
I N V E P+F ++ E L AM I L ++
Sbjct: 103 IDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFAI----------- 151
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
S+ + + G S +A D + E DD+ T +YTSGTTG PKGVML + N+
Sbjct: 152 SWKDFVAKGDTSHQAELDE-------RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIA 204
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQ 290
Q+ + GD L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 AQLEGHDQRLSLSQGDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVR 264
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE ++S I +++ + R+++ F + C + ++
Sbjct: 265 PTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKR 315
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 409
+PS + L H LA+KLV K+++ +G + GG L I
Sbjct: 316 KPSMM---------------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGR 360
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E NE+L
Sbjct: 361 FFHAIGINVKLGYGMTETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL----- 413
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T++ DE G+L TGD G I + G L + R
Sbjct: 414 ----VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDR 459
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELN 519
Query: 590 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IAYHDRVELIKHHQVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|378696081|ref|YP_005178039.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
gi|301168604|emb|CBW28193.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
Length = 599
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 263/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIKTGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLSHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKDIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHNFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSDILKMFEQ 539
>gi|320157490|ref|YP_004189869.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus MO6-24/O]
gi|319932802|gb|ADV87666.1| long-chain-fatty-acid-CoA ligase [Vibrio vulnificus MO6-24/O]
Length = 601
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 164/587 (27%), Positives = 269/587 (45%), Gaps = 87/587 (14%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q+I + + L G++ ++K+++FS+N +W VAD L A+ V +++ + +I
Sbjct: 43 QQIDELSLALLAQGIEVQDKIAIFSNNMPQWTVADFAALQLRAVTVPIYPTNTAAQAAYI 102
Query: 118 YNHSESVALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP-VFSYDE 175
+++ L V E P+F AA++ D E++ + + +
Sbjct: 103 LQNADVKVLFVGEQPQF----------DAAVKIF------------DECEQLNLIVAMSD 140
Query: 176 IIDLGRESR----KAFSDSNDARK----HYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
IDLG KAF + E +D+ T +YTSGTTG PKGVML +
Sbjct: 141 DIDLGEHHFAIHWKAFIQQGQQEACTELERRLEQANFEDLLTLIYTSGTTGQPKGVMLDY 200
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 286
N+ Q+ + D L LP HV+ERA +++ +G Y ++D L
Sbjct: 201 ANIAAQLEGHDRRLSLTENDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDAL 260
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
+P M +VP YE ++S I +++ + R+++ + + + + EG
Sbjct: 261 SDIKPTVMCAVPRFYEKIFSAIHEKVSRAPLMRKIMFTWAVNMGAKMSVCHQ--EG---- 314
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPM 405
+QPS + L H LA+KLV K+++ +G + + GG L
Sbjct: 315 ---RQPSLM---------------LKKAHALADKLVLSKLRALLGGNINFMPCGGAKLDE 356
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
I F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E NE+L
Sbjct: 357 TIGRFFHAIGINVKLGYGMTETTATISCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL- 413
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
VRG VM+GY+K P T++ DE G+L TGD G I H G L
Sbjct: 414 --------VRGPMVMRGYYKLPEETEKTFDEHGFLKTGDAGHIDEH----------GNLF 455
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + A
Sbjct: 456 ITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYA 515
Query: 586 KRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
K L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 516 KELNIKYHDRVELIKHHQVVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|68248553|ref|YP_247665.1| long chain fatty acid CoA ligase [Haemophilus influenzae 86-028NP]
gi|68056752|gb|AAX87005.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
86-028NP]
Length = 607
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 264/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V S +++++
Sbjct: 48 FQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYSTNTAQQAE 107
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 108 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 161
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I+ G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 162 SFIETGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 214
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 215 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 274
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 275 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWTISVGQKH---------FDLRANNKAIP 325
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 326 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 370
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 371 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 420
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA +DG+L TGD G G L + R K+
Sbjct: 421 -VRGKMVMKGYYKKPEETAQAFTKDGFLKTGDAGEFDEQ----------GNLFITDRIKE 469
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+++I +
Sbjct: 470 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQINIKY 529
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 530 HDRLELLKNSDILKMFEQ 547
>gi|145223549|ref|YP_001134227.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315443896|ref|YP_004076775.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium gilvum
Spyr1]
gi|145216035|gb|ABP45439.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315262199|gb|ADT98940.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium gilvum
Spyr1]
Length = 601
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 236/525 (44%), Gaps = 73/525 (13%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
+I A GL GV+ ++++L S W + D +L+ GA+ V SS+E++ +
Sbjct: 56 QIRSAARGLIAEGVQAGDRVALLSATRYEWPILDFAILSIGAVTVPIYETSSAEQVQFVL 115
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
S +VA E I + A+R I ++ G V + DE+ +
Sbjct: 116 ADSGAVAAIAETDAHAAHIEAQRDTLPALRRIYVIDGS-------------VPALDELAE 162
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
G A D + +I S D AT +YTSGTTG PKG LTH NLL++IR
Sbjct: 163 AGASVDAAAVDE-------RVASIRSTDAATLIYTSGTTGRPKGCQLTHSNLLYEIRGAK 215
Query: 239 DIVPAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
P G+K L LP HV RA FS G+ L +T+ ++NL +QP ++
Sbjct: 216 ACFPEHLAKGEKLLVFLPLAHVLARALTIGAFSNGVTLGFTSDIKNLVPMFAVFQPTLVV 275
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
SVP V+E +Y+ + T + A A I ++ K + G P +
Sbjct: 276 SVPRVFEKVYNTAELNAETGGKGKIFTAAANTAIEYS----KALDSG--------GPGLV 323
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 414
+ L H L +KLVY K+++A+G A +SGG L + FY +
Sbjct: 324 LKL---------------KHALFDKLVYGKLRAALGGRCHAAISGGAPLGARLGHFYRGV 368
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ + GYGLTE+S I R +GSVG + +++ G G + V
Sbjct: 369 GLSIYEGYGLTETSAAITVNRVGDLRVGSVGKLVPGNSMRL-----------GEDGELLV 417
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG V GY+ N T+ A+ DGW +TGD+G I G L + GR K+ I
Sbjct: 418 RGGVVFNGYWGNEEETR-AVFTDGWFHTGDLGAIDDD----------GFLTIVGRKKEII 466
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
V + G+NV P +LE+ LI Q + +G Q A+I D E
Sbjct: 467 VTAGGKNVAPAQLEDRLRAHPLISQAMAVGDQQPFIAALITVDTE 511
>gi|403737820|ref|ZP_10950548.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
gi|403191932|dbj|GAB77318.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
Length = 602
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 253/538 (47%), Gaps = 59/538 (10%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+R+ ++ + L+ + A L G+ P +++++F+ NS W +AD G++ GAI
Sbjct: 26 KRSEQWIRLSYTALKDQTRHIANALVRAGIAPGDRVAVFAGNSPEWTLADLGIMTAGAIT 85
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V SS E++ HI S + + V + R+A ++ + L S+ A
Sbjct: 86 VTIYQTSSPEQVRHILADSGAAIVFVGSAAEARRLAPVREELPELKKVFSL----STSAE 141
Query: 163 DIVEEIPVFSYDEIIDL-GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
D+ P + DL + + + + +A T+G D +AT VYTSGTTG PK
Sbjct: 142 DVENAPPGLIDGTLADLLAQPTDPEVASTVEAH----LRTMGHDTLATIVYTSGTTGEPK 197
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVR 280
GV L+H N+L ++ ++ + G + + LP HV+ER+ + + G+E +Y T R
Sbjct: 198 GVCLSHGNILAEVLAMKERFHLSPGLRSMCFLPLSHVFERSWTLVVLANGMENIYVTNPR 257
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ + + +P SVP +YE +Y+ +Q T +R V +R FA + +R
Sbjct: 258 TVAEAMVEIRPDAFCSVPRLYEKVYAVAHEQAGT--GVKRKVFDWAVRTGFATQSRRRA- 314
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK-AGVSG 399
+ P++L+A + +A++LV +++ A+G K SG
Sbjct: 315 -------GKSVPAHLLA----------------ANAIADRLVLHRVRDAVGGPKRLMASG 351
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
G + + F+ A ++V GYGLTE++P+++ +GSVG PI E++I D
Sbjct: 352 GAATRREVIEFFLAADLEVYEGYGLTETAPMVSCNSVGQVRIGSVGRPIPRCEVRIAD-- 409
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
G + VRG V GY+ P T++ DGW TGDIG +
Sbjct: 410 ---------NGEILVRGPNVFNGYWHAPELTEEVF-TDGWFRTGDIGHLDED-------- 451
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G L + R KD I+ + G+N+ P LE LI VV+G +++ A++ P+
Sbjct: 452 --GYLYVTDRLKDLIITAQGKNIAPAPLENHLSADPLIESAVVVGDNRKYLVALLQPN 507
>gi|387792640|ref|YP_006257705.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379655473|gb|AFD08529.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 631
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 153/581 (26%), Positives = 283/581 (48%), Gaps = 73/581 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSR-SSSEELLH 116
+++ A GL +GV+ +K++ ++ W+V + G+L TGA+NV + S +L+
Sbjct: 39 EQVYHLAAGLIAVGVEKNDKVAFLAEGRNAWIVGELGILYTGAVNVPLSVKLEESNDLIF 98
Query: 117 IYNHSES--VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
HS++ + ++ N I E L + ++ +I + +E+ +
Sbjct: 99 RIQHSDAKYIMVSARNLPKIRAIIENLPN---VKNVI------------VFDELDNYQSK 143
Query: 175 EIIDLGRESRKA--FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
EI +G +++ F ++++I +D A YTSGTT +PKG++L+H+N
Sbjct: 144 EI-HIGEINKRGEEFLAERMPEFESRFKSIKGNDYANISYTSGTTADPKGIILSHRNYTS 202
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNL 282
+ ++ K L +LP H + G++ F G M T ++N+
Sbjct: 203 NVEQALSLMNIPANWKTLIILPLDHCFAHVAGFYSFMASGASVATVDPGKNAMDT-LKNI 261
Query: 283 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++Q +P+ ++SVP + + I+ I + ++I++AY EG
Sbjct: 262 PVNMQEIKPNLLLSVPALAKNFKKNIESAIKQKGGITEKLFNHALKIAYAYNR-----EG 316
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS 402
F N+ Q + +V PL +K+++ K+++A G + GGG+
Sbjct: 317 F----NKGQGASIV--------------YKPLLAFYDKILFSKVRNAFGGELSFFIGGGA 358
Query: 403 LPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L + IDL F+ AIGV + GYGL+E++P+I++ + LGS G+ + E+KI D +
Sbjct: 359 L-LDIDLQRFFYAIGVPMFQGYGLSEATPIISSNSLKKHKLGSSGYLVKPMELKICDEQG 417
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
N LP G KG + ++G VM GY+KN +AT + ++GWL+TGD+G++
Sbjct: 418 NS-LPVGQKGEIVIKGENVMMGYWKNETATADTI-KNGWLHTGDLGYM----------DS 465
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKE 579
G L + GR K ++ S GE P +EE+ + +S I Q+++ A++VP+KE
Sbjct: 466 DGFLYVLGRFKSLLIGSDGEKYSPEGIEESLVENSKFIDQVMLHNNQDAYTTALLVPNKE 525
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 620
+ ++ + SE K++ I +L E+ ++ S+ F
Sbjct: 526 SLKSYLRQKGLNW--ESEEGKKEAIKMLQAEVNEYKSQGKF 564
>gi|422348826|ref|ZP_16429718.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658878|gb|EKB31740.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 609
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 245/551 (44%), Gaps = 65/551 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L ++++ + ++ ++ + NS ADQ LA G + V
Sbjct: 52 AQLMVRVMEWRRAYAAMNLERGTRIGILMPNSIDHACADQAALANGLVPVP--------- 102
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
LH + + A + + A+ L + R W + + D+ + V
Sbjct: 103 -LHAIDTPGASAFILSDSR-----AKVLVTNKLTR-----WKQIKAAGGDLQDLTAVIIT 151
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKY--ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
++ +D + S+ A H E DD+A VYTSGTTG PKGVMLTH N++
Sbjct: 152 EDEVDDETGMVRGLSEWLAAGTHVVELPEGPKEDDLAGIVYTSGTTGRPKGVMLTHGNIV 211
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
+++ + V + GD FLS LP H +ER GY++ + G + Y +V L DDL+
Sbjct: 212 SNVKATLECVFPQVGDIFLSFLPLSHTFERTAGYYLALATGCTIAYNRSVLLLADDLKTI 271
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P +ISVP VYE +++ + ++ S A R + + I + FC +
Sbjct: 272 RPTVIISVPRVYERIFARVHDKLKKSRPAARYLFDWAVEIG---------WRDFCRRNHL 322
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 409
A +D L + L K+ + G + +SGG +L +
Sbjct: 323 PVEHTGRAWLDGL-----------MRPLVRKVSSTLLDQFGGRLRIAISGGAALSSKVAR 371
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
+ +G+ + GYG+TE+SP+IA T N +VG P N+ E+++ G
Sbjct: 372 TFCGLGLPIIQGYGMTEASPIIAGNNRTLNQPNTVGKPFNNVEVRL-----------GEG 420
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
++++G + +GY+ P AT A EDGW TGD+G G+L ++GR
Sbjct: 421 DEIQIKGPSITRGYWNRPDATADAFTEDGWFRTGDVGGFNEL----------GLLSIKGR 470
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ IV STGE V P +LE A L Q VIG+++ I V + +E AK
Sbjct: 471 IKEIIVTSTGEKVPPADLEAAIETDPLFSQCYVIGENRPYLSLITVVNPDEWASFAKSCG 530
Query: 590 IVHADASELSK 600
+ AD + L
Sbjct: 531 VDPADPASLDN 541
>gi|229845424|ref|ZP_04465554.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
gi|229811620|gb|EEP47319.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
Length = 599
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 263/558 (47%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLTHNIGVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDHEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ N+ + + + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIKTGSNAQQ-----NELTQRLNQKQLS--DLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ Y A + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIM---------FYWAISVGQKHFDLRANNKTVP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSDILKMFEQ 539
>gi|153802845|ref|ZP_01957431.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|424592182|ref|ZP_18031606.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
gi|124121634|gb|EAY40377.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|408029778|gb|EKG66480.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
Length = 601
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|416893219|ref|ZP_11924505.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
gi|347814247|gb|EGY30897.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
Length = 578
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 158/585 (27%), Positives = 270/585 (46%), Gaps = 75/585 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L+Q+I + L + ++K+ +F+ N RW + D G L A+ V + +++++
Sbjct: 21 AELQQQIDKISLALLANHIDIQDKIGIFAHNMPRWTITDIGTLQVRAVTVPIYATNTAKQ 80
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
I N+++ + V + E ++++ E ++ I+ + K+++ + E +
Sbjct: 81 AQFIINNADMKIIFVGDQEQYDQVIEIADECPKLQKIVAM---KNTI--HLHEHTKACHW 135
Query: 174 DEIIDL-GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
E ID+ G + + D + +D+ T +YTSGTTG PKGVML + NL H
Sbjct: 136 QEFIDMAGEQYQTELQQRLDGK--------CLEDLFTLIYTSGTTGEPKGVMLDYANLAH 187
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQP 291
Q+++ + ++ D LS LP H++ERA ++ RG Y N ++ L +P
Sbjct: 188 QLKAHDQALKVDDSDVSLSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVRSALTEIRP 247
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVV---ARALIRISFAYTAFKRIYEGFCLTRN 348
M +VP YE +Y+ I ++ + R+ + A A+ R F L++
Sbjct: 248 TLMCAVPRFYEKIYTAILDKVHNAPQLRQWIFHWAMAIGRQHFD-----------ILSKG 296
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
QK I +L + LA KLV K+++ +G + GG L I
Sbjct: 297 QK----------------IGFLLKQQYALANKLVLGKLRALLGGRIRMMPCGGAKLEPTI 340
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
LF+ +IG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 341 GLFFHSIGLNIKLGYGMTETTATVSCWDDVNFNANSIGSLMPGAEVKI--GENNEIL--- 395
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
VRG VM+GY+K P T +A DG+L TGD G G L +
Sbjct: 396 ------VRGGMVMKGYYKKPQETAEAFTADGFLKTGDAG----------EFDANGNLYIT 439
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
R K+ + S G+ + P LE + I QI VI ++ A+IVP + AK+
Sbjct: 440 DRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIAVIADAKKYVSALIVPCYTALEEYAKQ 499
Query: 588 LSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
++I + D EL K E+ I+ L EL W F + P
Sbjct: 500 VNIKYQDRLELLKNSEIIQMLERRINDLQKELAGWEQIKRFTLLP 544
>gi|375129923|ref|YP_004992022.1| long-chain-fatty-acid--CoA ligase-like protein [Vibrio furnissii
NCTC 11218]
gi|315179096|gb|ADT86010.1| hypothetical long-chain-fatty-acid--CoA ligase-like protein [Vibrio
furnissii NCTC 11218]
Length = 604
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 170/624 (27%), Positives = 285/624 (45%), Gaps = 75/624 (12%)
Query: 14 LSSLDYHRHGFRVFTRNCVDAVATRIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGV 72
+++LD+H R V +RI + + ++ ++ ++ +E+ + L G+
Sbjct: 1 MANLDFH---IVKRIREQVALGGSRIALKHQVDNEWQGISWTQFGEEMDAMSMALLAFGL 57
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAV-ENP 131
++K+ +FS+N +W +AD L A+ V +++E+ +I ++ L V E P
Sbjct: 58 DVQDKIGIFSNNMPQWTIADFAALQIRAVTVPIYPTNTAEQAAYILQDADVKVLFVGEQP 117
Query: 132 EFFNRIAETLCSKA-AMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
+F A T+ + ++ I+ + S A + + S+ + LG + D
Sbjct: 118 QF--DAAVTMFEQCDQLQLIVAM-----SDAIALGDCDFAMSWQAFVALGENTSGELLDE 170
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 250
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L
Sbjct: 171 -------RLEQANDDDLFTLIYTSGTTGKPKGVMLDYCNVGAQLEGHDQRLNLSQDDVSL 223
Query: 251 SMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LP HV+ERA +++ +G Y V ++D L + +P M +VP YE ++S I
Sbjct: 224 CFLPLSHVFERAWSFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIH 283
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
+++ + R+V+ F ++ C + ++ PS WA C
Sbjct: 284 EKVARAPLHRKVM--------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC- 324
Query: 370 ILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 428
H LA+KLV K++ +G + GG L I F+ AIG+ V++GYG+TE++
Sbjct: 325 -----HQLADKLVLSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETT 379
Query: 429 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 488
I+ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 380 ATISCWDDQCFDPDSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPE 428
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
T Q DE G+L TGD G I G L + R K+ + S G+ + P +E
Sbjct: 429 ETAQTFDEHGFLKTGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIE 478
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-------- 600
A + + QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 479 GAIGKDHFVEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMF 538
Query: 601 EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L L K+ F++ P
Sbjct: 539 EKRVNELQHGLAKFEQVKRFKLLP 562
>gi|456352266|dbj|BAM86711.1| long-chain-fatty-acid-CoA ligase [Agromonas oligotrophica S58]
Length = 623
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 248/503 (49%), Gaps = 61/503 (12%)
Query: 76 EKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFN 135
E++++ N L DQ L+ G + V + +++ + +I S + L V++ E +
Sbjct: 78 ERVAILMPNGIAHLAMDQAALSRGLVPVPMHAVDNADSIAYILADSGARLLLVDSDERWE 137
Query: 136 RIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARK 195
IA + ++ II +++ AP + + D ++ A S SN+
Sbjct: 138 EIAAVGQALPDLKRIICA-DMRTARAP--AGDARLVEMDAWLN---APGNAASPSNEI-- 189
Query: 196 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPP 255
+I +D+A VYTSGTTG PKGVML+H N++ +++++ + A+ D FLS LP
Sbjct: 190 -----SIAPEDLAAIVYTSGTTGRPKGVMLSHDNVVSNLKAIHQRLVADGDDVFLSFLPL 244
Query: 256 WHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
H +ER GY+ + G + Y +V+ L DDL +P +ISVP +YE +YS +
Sbjct: 245 SHTFERTAGYYYPVAIGASVAYARSVKQLSDDLMEVRPTILISVPRIYERIYSVVMHHRA 304
Query: 314 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 373
++A + RAL+ ++ A + + TR ++L+D WP
Sbjct: 305 VANA----IERALLDLTIAIGGRRFDAQHGRGTR--------LSLLD--------RAAWP 344
Query: 374 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 432
L ++LV K+ + G + VSGG + + + A+G++V GYG+TE+SPV++
Sbjct: 345 ---LLKRLVADKVLNRFGGRLQVAVSGGAPIAEPVVRLFLALGLEVLQGYGMTETSPVVS 401
Query: 433 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 492
P N +VG + E++I G+ + VRG+ VM Y+ P T +
Sbjct: 402 VNTPDDNDPRTVGRALPGIEVRI-----------GANDELMVRGANVMLAYWHRPEETAR 450
Query: 493 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 552
+ DGWL+TGD ++R G + + GR KD +V STGE + P +LE A L
Sbjct: 451 VKEADGWLHTGD-----------QARIDQGRITITGRIKDILVTSTGEKIAPADLETAIL 499
Query: 553 RSSLIRQIVVIGQDQRRPGAIIV 575
L Q +VIG+++ AI+V
Sbjct: 500 TDPLFEQAIVIGENRPFLAAIVV 522
>gi|269964650|ref|ZP_06178888.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
gi|269830549|gb|EEZ84770.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
Length = 602
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 158/586 (26%), Positives = 273/586 (46%), Gaps = 77/586 (13%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q++ + L G+ ++K+ +FS+N +W +AD L ++ V +++ +
Sbjct: 39 TQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADIAALQLRSVTVPIYPTNTAAQ 98
Query: 114 LLHIYNHSESVALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+I N+++ L V E P+F ++ I ++ + + ++I +
Sbjct: 99 SAYIINNADVKVLFVGEQPQFDAAVS------------IFDQCEQLELIVAMSDDIELGD 146
Query: 173 YDEIIDLGRESRKAFSDSNDA----RKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
+D +I S +AF DA + + DD+ T +YTSGTTG PKGVML +
Sbjct: 147 HDFVI-----SWQAFVAKGDAIYQVELDARLDQAKEDDLLTLIYTSGTTGQPKGVMLDYA 201
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 287
N+ Q+ + D L LP HV+ERA +++ +G Y ++D L
Sbjct: 202 NIAAQLEGHDQRLSLSQSDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALS 261
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+ +P M +VP YE ++S I +++ + R+++ + + A C +
Sbjct: 262 QVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIMFTWAVNMGAKMAA--------C-HQ 312
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 406
++QPS L L + LA+KLV K+++ +G + GG L
Sbjct: 313 EKRQPSLL---------------LRKSYALADKLVLSKLRALLGGQINFMPCGGAKLDET 357
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL-- 413
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
VRG VM+GY+K P T++ DE G+L TGD G+I + G L +
Sbjct: 414 -------VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFI 456
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAK 516
Query: 587 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRVELIKHHQVVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|260582084|ref|ZP_05849879.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
gi|260094974|gb|EEW78867.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
Length = 599
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 152/559 (27%), Positives = 262/559 (46%), Gaps = 63/559 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI-VEEIPV-FSY 173
I NH++ L V + E +++ E ++ I+ ++ P I +++ P+ ++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIV-------AMKPTIQLQQDPLSCTW 152
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ I G +++ N+ + + + D+ T +YTSGTTG PKGVML + NL HQ
Sbjct: 153 ESFIKTGSNAQQ-----NELTQRLNQKQLS--DLFTIIYTSGTTGEPKGVMLDYANLAHQ 205
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPH 292
+ + + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 206 LETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPT 265
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 266 LMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAI 316
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 317 PFL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFF 361
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 362 HAIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL------- 412
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG VM+GY+K P T QA EDG+L TGD G G L + R K
Sbjct: 413 --VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIK 460
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ + S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I
Sbjct: 461 ELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIK 520
Query: 592 HADASELSKEKTISLLYGE 610
+ D EL K I ++ +
Sbjct: 521 YHDRLELLKNSDILKMFEQ 539
>gi|254292111|ref|ZP_04962885.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
gi|150421979|gb|EDN13952.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
Length = 601
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LQQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLRTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|417840982|ref|ZP_12487090.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
gi|341950793|gb|EGT77380.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
Length = 602
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 261/558 (46%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ S++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPQLQKIVAM---KSTIQ---LQQDPLSCSWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G ++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIKTGSNVQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 EAHDLSLNVTDQDVSLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
IG+ +++GYG+TE++ ++ S+G I E+KI E NE+L
Sbjct: 363 VIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLIPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDKQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSDILKMFEQ 539
>gi|74318615|ref|YP_316355.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
gi|74058110|gb|AAZ98550.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
Length = 602
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 160/542 (29%), Positives = 248/542 (45%), Gaps = 68/542 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G+ P +++++ N W++ DQ LA G + V +E +I +++++ L VE
Sbjct: 62 GLAPGDRVAVMLKNCVEWVIFDQAALALGLVTVPLYLDDRAESAAYILDNADAKLLLVEG 121
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
++AE S ++ I+ L +S +A + P F A
Sbjct: 122 RFQLKKLAEIAASSPGLQRIVCLVAPESRLA----DWSPRFVV-----------AAEWLE 166
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAENGD 247
N ++ D +A+ VYTSGTTG PKGVMLTH NLL + D P E
Sbjct: 167 NAVATAVPERSLAPDLLASIVYTSGTTGRPKGVMLTHDNLLWNAYYASHCADFGPHE--- 223
Query: 248 KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 305
FLS LP H ER GY++ G E+ Y ++ L DLQ +P +ISVP +YE +Y
Sbjct: 224 VFLSFLPLSHTLERTGGYYLAMLLGAEVAYARSIAQLAQDLQAIRPTVLISVPRIYERVY 283
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
IQ + A ARAL R++ + ++R R+Q + +Y W
Sbjct: 284 GRIQDGLEKKGAP----ARALFRLAV-HVGWRR------FERSQGR-AY--------WHP 323
Query: 366 IICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 425
+ L+A + Q G + +SGG +L + + +GV V GYGLT
Sbjct: 324 ELLLWPLLERLVARNVT----QKLGGRLRLAISGGAALSPEVARVFIGLGVPVYQGYGLT 379
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E+SPV+ RP N ++G P+ E++I D +E+L R VM+GY+K
Sbjct: 380 ETSPVVCVNRPDSNSPATIGQPLPGVEVRIGD--NDELL---------TRSRCVMRGYWK 428
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
+ +AT+ +D DGWL++GD + G + GR KD IVL+ GE V P
Sbjct: 429 DEAATRAMIDADGWLHSGDQARV----------DADGHYTIIGRIKDIIVLNNGEKVPPT 478
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
++E A L L Q++V+G+ + A+ V ++ A L + A + L K
Sbjct: 479 DMESAILLDPLFEQVMVVGEGRPYLAALTVLNEAHWEAFAASLHLDPAQPATLRDPKVTR 538
Query: 606 LL 607
L
Sbjct: 539 AL 540
>gi|384425421|ref|YP_005634779.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
gi|327484974|gb|AEA79381.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
Length = 601
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|153830473|ref|ZP_01983140.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
gi|148874039|gb|EDL72174.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
Length = 601
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETTESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|238760082|ref|ZP_04621232.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
gi|238701701|gb|EEP94268.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
Length = 599
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 156/593 (26%), Positives = 282/593 (47%), Gaps = 76/593 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ + + L +GV +E++ +F++NS W +AD +L ++V + +++ +
Sbjct: 41 QQVDTHVTRISAALLSLGVGIQERVGIFANNSMAWSLADLAILQLRGVSVPLYATNTTAQ 100
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
++ N ++ L V + F+ IA TL S+ P +V+ I + S
Sbjct: 101 AAYVVNDADVRILFVGGQKQFD-IALTL----------------RSLCPQLVQIIALESS 143
Query: 174 DEIIDLGRESRKA-FSDSNDARKHY----KYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
++ G A F ++A + + + E+ DD+ T +YTSGTTG PKGVML ++
Sbjct: 144 VDLRGCGYAQHLADFEQQSNAVQLHLLTSRIESCDLDDLFTLIYTSGTTGEPKGVMLDYR 203
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN---LKDD 285
N+ Q+ + D L LP HV+ERA ++ G + +Y +R+ ++
Sbjct: 204 NMAAQLYLHDQRLTLTAQDVSLCFLPLSHVFERAWSCYVMHTGAQNVY--IRDTDWVRPA 261
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
+Q +P M +VP YE ++S I ++ + RR++ R +A +R ++ CL
Sbjct: 262 MQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHRRMLFR------WAVGRGERKFQ--CL 313
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLP 404
R QK PS L L+ H LA++LV K+++ +G + + G L
Sbjct: 314 QRGQK-PSLLSGLV---------------HKLADRLVLSKLRAVLGGRVRFLPAAGARLD 357
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+I LF++AIGV ++ GYG+TE+ ++ GS+G P+ ++++
Sbjct: 358 DNIILFFQAIGVNIKYGYGMTETCATVSCWEENDFRFGSIGKPLPGIDVRL--------- 408
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G++ ++VRG VM+GYF P T ++ +DGWL TGD G + G L
Sbjct: 409 --GAENEIQVRGPIVMRGYFNKPQETAESFTDDGWLKTGDAGVLDAQ----------GNL 456
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
+ R KD + S G+ + P LE + I QI VI ++ A+IVP E +
Sbjct: 457 FITERLKDLMKTSGGKYIAPQMLEGTLGQDRFIEQIAVIADTRKFVSALIVPCFESLEEY 516
Query: 585 AKRLSI-VHADASELSKEKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
A+ +++ H+ L +SL L++ + + Q+ ++ + FT+
Sbjct: 517 ARSINLKYHSRLELLRHSHIVSLFEQRLKEMQKELALFEQVKRFTLLPQAFTM 569
>gi|297581107|ref|ZP_06943032.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|417821798|ref|ZP_12468412.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|423958046|ref|ZP_17735514.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|423985757|ref|ZP_17739070.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
gi|297534933|gb|EFH73769.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|340039429|gb|EGR00404.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|408656122|gb|EKL27224.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|408663415|gb|EKL34290.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
Length = 601
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|377573521|ref|ZP_09802577.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
gi|377537636|dbj|GAB47742.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
Length = 607
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 160/617 (25%), Positives = 272/617 (44%), Gaps = 62/617 (10%)
Query: 29 RNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
R+ D VA R+R R + +L++ A + +G+ P +++++ + NS W
Sbjct: 15 RDNADLVALRVR---RRGDWVTTTYRELDEISARLATAVLELGLTPGDRVAIHAGNSPEW 71
Query: 89 LVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMR 148
+ D L G + V + S+ ++ H+ S + + E R E L + +
Sbjct: 72 TMVDIACLRAGLVTVPIYTTSTPSQIAHVLRDSGARVVVCGTEELLARTQEALATDDDLD 131
Query: 149 F---IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHY--KYETIG 203
+LL G + + E V + +I+D + + R+ + K E +
Sbjct: 132 THMPCVLLPGDRHADDTAGAEGASVRTLAQILDTVPGDAETLTR---LREEFAAKEEEVD 188
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
D T +YTSGTTG PKGV+LT + ++ + + G++ +S LP H YER
Sbjct: 189 PDTPVTIIYTSGTTGAPKGVVLTQRAYSRELYVIDTLFGLPRGERNMSFLPLSHAYERGW 248
Query: 264 GYFIFSRGIE-LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 322
Y + G+E T + + + +P +SVP +YE +Y+G Q+ RR+
Sbjct: 249 TYCALASGMENCSVTDPKTVAAAMLDIRPATFVSVPRLYEKVYAGAH-QLAGEGVKRRLF 307
Query: 323 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 382
AL R+ G + R +++ R + L H LA++LV
Sbjct: 308 DWAL-RV------------GADVQRRRRE------------GRPVPRTLAARHALADRLV 342
Query: 383 YKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
++ +G K ++ GG+ L ++ F+ A G+ + GYGLTE++P+++ P
Sbjct: 343 LHNVRDVVGGEKYVMAAGGAPLRQEVEEFFLAAGLPIYQGYGLTETAPLVSCNAPGAVKS 402
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
G+ G P+ TE++I D ET E+L VRG V GY+ P T +DE+GW +
Sbjct: 403 GTAGRPVPGTEVRISD-ETGEIL---------VRGDNVTPGYYNRPEETAAVIDEEGWFH 452
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD+G + G L++ R KD IV G+N+ P +E A L+ V
Sbjct: 453 TGDVGHL----------DADGYLLITDRIKDLIVTMQGKNIAPGPIESALTADPLVEAAV 502
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF- 620
VIG + A+I P EE+ A+ EL + Y +L + S
Sbjct: 503 VIGDGRPYLTALIQPSFEELEHRAREKGWASDSTEELLARGEVEQYYDDLIARVGRDSAR 562
Query: 621 --QIGPIHVVDEPFTVN 635
+I ++ EP T++
Sbjct: 563 YERIQKFRLLSEPLTMD 579
>gi|423332199|ref|ZP_17309983.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
gi|409229322|gb|EKN22199.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
Length = 633
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 160/588 (27%), Positives = 279/588 (47%), Gaps = 68/588 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ RF SK+ + + GL +GV+ + ++L S+ W++ + M GA N
Sbjct: 26 KTGKRFEPTTYSKVRDLVYEEGAGLVSLGVRKGDNMALLSEGRNAWIIGELAMFYAGATN 85
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I A+R II+L +A
Sbjct: 86 VPLSIKLEEANDLLFRLVHADVKYIMVSGQQL-KKIRAIKDKLPAVRKIIVL----DELA 140
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
E+P+ EI +G K + + + +++G+DD AT YTSGTT +P
Sbjct: 141 EYQDREMPL---SEIRRMG----KVYLGIHPLEEFLAIGQSLGNDDYATITYTSGTTADP 193
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IEL 274
KGV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 KGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATVQV 253
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ +++ ++P ++SVP + + I++ I + +RI +
Sbjct: 254 GRTGMETLKNIPVNIKEFKPDLILSVPALAKNFKKNIEQGIRARGKNAVRLFNLALRIGY 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y EG RI +L PL L +KL++ K++ G
Sbjct: 314 IYNGDSDEEEGKGF-------------------RI---LLKPLVRLFDKLLFAKVRENFG 351
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K + GG L + FY A+G+ + GYGL+E++P+I+ P +V GS G +
Sbjct: 352 GELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATPIISTNGPRRHVFGSSGVLVRP 411
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D + N VLP G KG + +RG VM GY+KNP++T + E GWL TGD+G++
Sbjct: 412 LDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPASTADTVKE-GWLYTGDMGYMR- 468
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRR 569
G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 469 ----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPY 518
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTISLLYGELRKW 614
A++VP+KE + R + H + S+ +E+ I ++ ++ ++
Sbjct: 519 TTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIRIIQRQIDRF 561
>gi|419838174|ref|ZP_14361612.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|421344598|ref|ZP_15795001.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|422308417|ref|ZP_16395567.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|423736135|ref|ZP_17709325.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|424010468|ref|ZP_17753401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
gi|424660979|ref|ZP_18098226.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|395940678|gb|EJH51359.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|408049851|gb|EKG85040.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|408617687|gb|EKK90800.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|408629107|gb|EKL01820.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|408856722|gb|EKL96417.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|408863097|gb|EKM02593.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
Length = 601
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|145630709|ref|ZP_01786488.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
gi|144983835|gb|EDJ91285.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
Length = 599
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 154/556 (27%), Positives = 262/556 (47%), Gaps = 61/556 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSLALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + E +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I G +++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIKTGSNAQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 ETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLY 608
D EL K I ++
Sbjct: 522 HDRLELLKNSDILKMF 537
>gi|375264373|ref|YP_005021816.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
gi|369839697|gb|AEX20841.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
Length = 599
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 159/579 (27%), Positives = 273/579 (47%), Gaps = 71/579 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q++ + + L G++ ++K+ +FS+N +W +AD L ++ V +++ + +I
Sbjct: 43 QQVDELSLALLAQGLRVQDKVGIFSNNMPQWTIADFAALQVRSVTVPIYPTNTAAQSAYI 102
Query: 118 YNHSESVALAV-ENPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
++++ L V E P+F ++ CS+ + I+ + S ++ + V S+ +
Sbjct: 103 LDNADVKVLFVGEQPQFDAAVSIFEQCSQ--LELIVAM-----SDDIELGDHPFVASWKD 155
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G S + + DAR E DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 156 FIAKGNSS---YQEELDARVAQACE----DDLLTLIYTSGTTGQPKGVMLDYANIAAQLE 208
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYM 294
+ D L LP HV+ERA +++ +G Y ++D L + +P M
Sbjct: 209 GHDKRLSLTQDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLKDTAQVRDALSQVRPTVM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+VP YE ++S I +++ + R+++ F + C + ++QPS
Sbjct: 269 CAVPRFYEKIFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRQPSI 319
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEA 413
+ L H LA+KLV K+++ +G + GG L I F+ A
Sbjct: 320 M---------------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHA 364
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
+G+ V++GYG+TE++ ++ C S+G + ++KI NE+L
Sbjct: 365 MGINVKLGYGMTETTATVSCWDDYCFDPDSIGTSMPGAQVKI--GANNEIL--------- 413
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG VM+GY+K P T++ DE G+L TGD G I + G L + R K+
Sbjct: 414 VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKEL 463
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
+ S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I +
Sbjct: 464 MKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYH 523
Query: 594 DASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
D EL K EK ++ L EL K+ F++ P
Sbjct: 524 DRVELIKHHQVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|344343202|ref|ZP_08774071.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
gi|343805133|gb|EGV23030.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
Length = 649
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/533 (29%), Positives = 249/533 (46%), Gaps = 62/533 (11%)
Query: 72 VKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENP 131
++P +++++ N W++ DQ L G + V + ++ +I N + L V++
Sbjct: 109 LEPGDRVAILLRNCPEWVMFDQAALGLGLVTVPLYTDDRADNAAYILNDAAVKVLLVQDL 168
Query: 132 EFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSN 191
+ R+AE + ++LL ++S A + V + D + A + ++
Sbjct: 169 GRWRRLAEAIGDSPWPLRVVLLEASEASRACAATDPRVVVAEDWL--------PATAPAS 220
Query: 192 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 251
+R+ D +AT VYTSGTTG PKGVML+H+N+L + D FLS
Sbjct: 221 TSREG------DPDALATIVYTSGTTGRPKGVMLSHRNILSNAHGALTQIDVYGEDVFLS 274
Query: 252 MLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
LP H+ ER Y++ G + Y ++ L +DLQ +P MI+VP V+E +Y I
Sbjct: 275 FLPLSHMLERTGSYYLPMMAGSRVAYARSIGQLAEDLQTIRPTAMIAVPRVFERVYQRIL 334
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
Q+ R AR L + A A R +E R Q + + WL
Sbjct: 335 DQL----DKRPKPARWLFNAAVA--AGWRTFE-----REQGRAGWH----PWL------- 372
Query: 370 ILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
++WP LL K+ Q G +A VSGG L + + +GV + GYGLTE+SP
Sbjct: 373 LVWP--LLRRKVALPVQQRLGGRLRATVSGGAPLSTEVARTFIGLGVPLLQGYGLTETSP 430
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 489
VI+ N+ SVG P+ +++I G + + VRG M GY+ N +A
Sbjct: 431 VISFNTLQSNIPASVGVPLRGLQVRI-----------GPESELLVRGDNTMLGYWNNHAA 479
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T + L +DGWL+TGD I +H + + GR KD +VLS GE V P ++E
Sbjct: 480 TAKMLAQDGWLHTGDQARIEDNH-----------IYITGRIKDILVLSNGEKVPPGDMEL 528
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
A L Q+VV+G+ Q A++V + + A L + D + L+ +
Sbjct: 529 AIALDPLFDQVVVLGEGQSYLSALLVLNPDLWPGLALELGLEPEDPTSLANAR 581
>gi|313204617|ref|YP_004043274.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312443933|gb|ADQ80289.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 600
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 256/556 (46%), Gaps = 70/556 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+E+ ++ IGV +++++ FS N L+ D + A A+ V + SS++++ +I
Sbjct: 43 KEVSSISKSFVEIGVSEQQRVAQFSQNKAENLIIDFALFANRAVMVPLYATSSAQQVEYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
N +E + V + + +N IA + ++ I+ + KK A + Y + +
Sbjct: 103 VNDAEIGVIFVGDQQQYN-IAYEVAQQSKYLKKIIAFDKKVVFA----DAANAMYYSDFL 157
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL-----LH 232
+G +S K F +++ D+A +YTSGTTGNPKGVM+ H +H
Sbjct: 158 LIGEKSTKHF------EVDHRHSETSESDLACILYTSGTTGNPKGVMMPHSCFTEAMRIH 211
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR--NLKDDLQRYQ 290
IR + + D ++ LP HV+ER YF +G+ + Y +R ++ ++
Sbjct: 212 NIR----LTSITDKDTSIAFLPLSHVFERTWCYFCIFKGVTI-YINLRPTEIQQTIKDVH 266
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP +E +Y+G+++ + S V I++A KR + R K
Sbjct: 267 PTLMCAVPRFWEKVYAGVKENLSKYSPIMLGV------IAWAVATGKR--HNVDILRKGK 318
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 408
QP + + +A+KL++ K++ +GI A + + G L I
Sbjct: 319 QPDVFLKF---------------GYSIADKLIFSKVKETLGIENANMLPTAGAKLSDEIA 363
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
LF+ +IGV + GYGLTES+ + +G+VG+ + +KI D NE+L
Sbjct: 364 LFFRSIGVPIVYGYGLTESTATVCCYEYVGYEIGTVGNIMPDVSVKIGD--DNEIL---- 417
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
++G + GY+ NP A + EDGW TGD G+I + +VL
Sbjct: 418 -----LKGKTIFPGYYNNPEANAASFTEDGWFKTGDAGYIKDNK-----------IVLTE 461
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R KD S G+ + P E+E I Q+ VIG ++ AII P+ + A++
Sbjct: 462 RIKDLFKTSNGKYIAPQEIETRLALDKYIEQVAVIGDERNYVTAIIAPNIPALEEYAQKH 521
Query: 589 SIVHADASELSKEKTI 604
SI + + +L K I
Sbjct: 522 SITYENIDDLLKSPKI 537
>gi|313204863|ref|YP_004043520.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444179|gb|ADQ80535.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 634
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 163/603 (27%), Positives = 288/603 (47%), Gaps = 79/603 (13%)
Query: 57 EQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSR-SSSEELL 115
+Q+ A GL +G++ +K++L S+ W++ + G+L GA+NV + S +L+
Sbjct: 39 QQQAQHLAAGLIQLGIEMYDKVALLSEGRNAWIIGELGILHAGAVNVPLSIKLEESNDLI 98
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE----EIPVF 171
HSE+ + V + +I + S ++ +I+L D E EIP+
Sbjct: 99 FRLIHSETKYIFVSGGQL-KKIRAIIKSLPLIKKVIIL--------DDQTEYEELEIPI- 148
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
++I G++ K ++ R E I DD+A YTSGTT +PKG+MLTH+N
Sbjct: 149 --SKLIADGKQLLKTQPEAVQRR----VEAIKPDDLANITYTSGTTADPKGIMLTHRNYT 202
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRN 281
+ ++ + L +LP H + G++ F G M T ++N
Sbjct: 203 ANVEQALTLMDISTSTRTLLILPLDHCFAHVAGFYSFMALGASVGTVQSGKTGMET-LKN 261
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+ +++ +P+ ++SVP + ++ I+ I + + +S++Y E
Sbjct: 262 IPINIKELKPNILLSVPALAKSFKKNIEANIRAQGDMVNRLFNFALNLSYSYNK-----E 316
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGG 401
G+ + + + PL +L +++++KK++ A G + GGG
Sbjct: 317 GYNKGKG------------------LQILKKPLIVLFDRILFKKVREAFGGNLDFFIGGG 358
Query: 402 SLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
+L + IDL FY AIG+ + GYGL+E++P+I++ + LGS G+ + E+KI D+E
Sbjct: 359 AL-LDIDLQRFYYAIGIPMFQGYGLSEATPIISSNGLKHHKLGSSGYLVKPLELKIYDSE 417
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
+ LP KG + ++G VM GYFKN AT + + +DGWL+TGD+G++
Sbjct: 418 GKQ-LPNYEKGEIVIKGENVMAGYFKNEKATAETI-KDGWLHTGDMGYM----------D 465
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
G L + GR K ++ S GE P +EE+ A S I Q+V+ A+IVP+K
Sbjct: 466 NDGFLYVVGRFKSLLISSDGEKYSPEGIEESIADNSRYIDQVVLYNNQNPYTTALIVPNK 525
Query: 579 EEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ-IGP-------IHVVDE 630
E + K + S +KE ++ L E+ ++ + + P + V+ E
Sbjct: 526 EALKRYVKEKKPQLSWDSNEAKELALNKLQKEINEYKKGGRLEGLFPERWLPSAVAVIGE 585
Query: 631 PFT 633
PF+
Sbjct: 586 PFS 588
>gi|387774023|ref|ZP_10129303.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
gi|386903110|gb|EIJ67930.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
Length = 591
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 165/608 (27%), Positives = 273/608 (44%), Gaps = 89/608 (14%)
Query: 14 LSSLDYHR-HGFRVFTRNCVDAVATRIRISRRNHRFRVFCE---SKLEQEILDFAEGLRV 69
+S+LD+H + R +N + A R + + +C S +QEI + + L
Sbjct: 1 MSALDFHFVNRLRFQAKNFANCTALRFQEQGK------WCNMEWSTFQQEIDNISLALIA 54
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
G++ ++K+ +F+ N RW +AD G + + V + ++ ++ +I N ++ L
Sbjct: 55 QGIEIQDKIGIFAHNMPRWSIADFGAMQARVVTVPIYATNTPPQVEYIINDADIRIL--- 111
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAF-- 187
F A+ C+ +A + + I + + I+L
Sbjct: 112 ---FVGEQAQMDCA--------------IQIANNCTQLIKIVAMKSSINLHNHPLACHWE 154
Query: 188 ----SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
D N + + DD+ T +YTSGTTG+PKGVML + NL HQ++S +
Sbjct: 155 NFIQVDKNMIVLEARLASKRLDDLFTLIYTSGTTGDPKGVMLDYANLAHQLQSHDQALNI 214
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 302
D LS LP H++ERA +IF RG Y ++ L +P M +VP YE
Sbjct: 215 SEQDISLSFLPLSHIFERAWVAYIFHRGTTNCYLENTDQIRQALVETKPTVMCAVPRFYE 274
Query: 303 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 362
+Y+ + ++ + RR + +A A ++ Y+ +PS WL
Sbjct: 275 KIYAAVLDKVEKAPFIRRTL------FHWAIQAGEKHYQS-------AKPS------RWL 315
Query: 363 -WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 420
W H A+KLV K+++ +G + GG L I F+ ++GV V++
Sbjct: 316 KWQ----------HKWADKLVLSKLRALLGGQVRMMPCGGAKLEPTIGKFFHSLGVNVKL 365
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYG+TE++ ++ S+G + +TE+KI E NE+L VRG VM
Sbjct: 366 GYGMTETTATVSCWEDHGFNPNSIGKLMPNTEVKI--GENNEIL---------VRGGMVM 414
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GY+K P T A EDG+L TGD G I H G L + R K+ + S G+
Sbjct: 415 RGYYKKPEETANAFTEDGFLKTGDAGEIDEH----------GNLHITDRIKELMKTSNGK 464
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
+ P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 465 YIAPQYIEGKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRLELIK 524
Query: 601 EKTISLLY 608
I ++
Sbjct: 525 HAEIIQMF 532
>gi|258622365|ref|ZP_05717390.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|424807687|ref|ZP_18233095.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
gi|258585381|gb|EEW10105.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|342325629|gb|EGU21409.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
Length = 601
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 264/570 (46%), Gaps = 79/570 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES-VALAVE 129
G+ ++K+++FS+N RW +AD L A+ V ++ E+ +I ++++ V E
Sbjct: 56 GIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGE 115
Query: 130 NPEFFNRIAE-TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFS 188
P+F +++ C + +R I+ + + D+ + +D+ F
Sbjct: 116 QPQFDAALSQFEHCPE--LRLIVAM-----NPNIDLKQASCAMHWDD-----------FV 157
Query: 189 DSNDARKHYKY----ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
N + H E DD+ T +YTSGTTG PKGVML ++N+ Q+ +
Sbjct: 158 AQNQTKDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLT 217
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 303
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE
Sbjct: 218 QDDVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEK 277
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
++S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 278 IFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL-------- 320
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 422
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LTQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE++ I+ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K T ++ DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYI 472
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 600
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHS 532
Query: 601 ------EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 533 QVLEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|154492200|ref|ZP_02031826.1| hypothetical protein PARMER_01834 [Parabacteroides merdae ATCC
43184]
gi|423345257|ref|ZP_17322946.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|423722201|ref|ZP_17696377.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
gi|154087425|gb|EDN86470.1| AMP-binding enzyme [Parabacteroides merdae ATCC 43184]
gi|409223043|gb|EKN15980.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|409242692|gb|EKN35453.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
Length = 635
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 152/585 (25%), Positives = 283/585 (48%), Gaps = 71/585 (12%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
F +++Q++ GL +GVK + ++L S+ W++ + M GA NV
Sbjct: 30 FEPTTYKEVQQQVYAAGAGLIALGVKKGDNMALLSEGRNAWIIGELAMFYAGATNVPLSI 89
Query: 108 R-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE 166
+ + +LL H++ + V + +I + + II +++
Sbjct: 90 KLEEANDLLFRLVHADVKYILVSGNQL-KKIRAIMDKLPLVEKII------------VID 136
Query: 167 EIPVF-----SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
E+P + S+ E+ +G+E + S + +++ ++D AT YTSGTT +PK
Sbjct: 137 ELPEYKEKEISWSEVFRMGKEYLASHSLEDFLAVG---QSLQNNDYATITYTSGTTADPK 193
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IELM 275
GV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 GVILTHRNYTANVEQALSCVDIDDTWRTLIILPLDHCFAHVVGFYIFMSKGASVATVQVG 253
Query: 276 YTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
T + LK+ +++ ++P+ ++SVP + + I++ I + +++++
Sbjct: 254 RTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQGIRAQGKNITRLFDFALKVAYI 313
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
Y R +G R + +L PL L + +++ K++ G
Sbjct: 314 YNGDGREDKG----------------------RGVRFLLKPLVSLFDHMLFTKVRENFGG 351
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
K + GG L + FY AIG+ + GYGL+E++PVI+ P + GS G +
Sbjct: 352 QLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATPVISTNGPHRHTFGSSGMLVRPL 411
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
++KI DA+ E LPAG KG + +RG VM GY+KNP +T + + DGWL TGD+G++
Sbjct: 412 DLKICDADGKE-LPAGEKGEIVIRGENVMAGYWKNPVSTAETV-RDGWLYTGDMGYMG-- 467
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRRP 570
H G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 468 HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPYT 519
Query: 571 GAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELRKW 614
A++VP+K+ + K L+ + D +S+ +E+ I ++ ++ ++
Sbjct: 520 VALVVPNKDRL---KKHLTHQYLDLSSDKGREEAIRIIQSQIDRF 561
>gi|296166052|ref|ZP_06848500.1| possible long-chain-fatty-acid--CoA ligase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295898591|gb|EFG78149.1| possible long-chain-fatty-acid--CoA ligase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 600
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 244/534 (45%), Gaps = 73/534 (13%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V C +++ ++ A GL +GV+ +++ +FS W + D +L+ GA+ V S
Sbjct: 46 VTC-AEVADQVRSAALGLIGLGVQAGDRVCIFSATRYEWAIVDLAILSVGAVTVPIYETS 104
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
S+E++ + SE+V E + E AMR ++ + G P ++++
Sbjct: 105 SAEQVRWVLQDSEAVLAFAETDAHAAMVTELTAELPAMRRVLHIDGS----GPKALDQLA 160
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+A + A + E + +DD AT +YTSGTTG PKG LTH N
Sbjct: 161 ---------------EAAASVEPAELTARQEGLRADDPATLIYTSGTTGRPKGCQLTHSN 205
Query: 230 LLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 286
LL++ R + +P + G + L LP HV R+ F+ + + +T+ ++NL
Sbjct: 206 LLYETRGAKECLPTLLDEGQRLLIFLPLAHVLARSLTLSAFANKVTVGFTSDIKNLLPMF 265
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
++P ++SVP V+E +Y+ ++ R A + ++
Sbjct: 266 AVFKPTVVVSVPRVFEKVYNTAEQNAVNDGKGRIFAAAVQAAVDWSQ------------A 313
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
+++ +P L L H L ++LVY K+++A+G A VSGG L
Sbjct: 314 QDRGRPGPL---------------LRAKHALFDRLVYHKLRAALGGECHASVSGGAPLGA 358
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
+ FY +G+ + GYGLTE+S I + +G+VG + ++I D
Sbjct: 359 RLGHFYRGVGLTIHEGYGLTETSSAITVNQVGNVRIGTVGTLLPGNSMRIAD-------- 410
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G + VRG V GY++N AT+ A DGW TGD+G + G L
Sbjct: 411 ---DGELLVRGGVVFSGYWRNEQATRDAF-TDGWFKTGDLGALDED----------GFLK 456
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+ GR K+ IV + G+NV P LE+ +LI Q +V+G + GA+I D E
Sbjct: 457 ITGRKKEIIVTAGGKNVAPAVLEDQLRAHALISQAMVVGDAKPFIGALITIDPE 510
>gi|153839176|ref|ZP_01991843.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
gi|149747314|gb|EDM58294.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
Length = 602
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 263/583 (45%), Gaps = 79/583 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
I N V E P+F ++ E L AM I L ++
Sbjct: 103 IDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFAI----------- 151
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
S+ + + G +R+A D + E DD+ T +YTSGTTG PKGVML + N+
Sbjct: 152 SWKDFVAKGDTNRQAELDE-------RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIA 204
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 290
Q+ + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 AQLEGHDQRLSLSQDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVR 264
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE ++S I +++ + R+++ F + C + ++
Sbjct: 265 PTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKR 315
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 409
+PS + L H LA+KLV K+++ +G + GG L I
Sbjct: 316 KPSMM---------------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGR 360
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E NE+L
Sbjct: 361 FFHAIGINVKLGYGMTETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL----- 413
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T++ DE G+L TGD G I + G L + R
Sbjct: 414 ----VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDR 459
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELN 519
Query: 590 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IAYHDRVELIKHHQVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|160891396|ref|ZP_02072399.1| hypothetical protein BACUNI_03846 [Bacteroides uniformis ATCC 8492]
gi|156858803|gb|EDO52234.1| AMP-binding enzyme [Bacteroides uniformis ATCC 8492]
Length = 601
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 266/589 (45%), Gaps = 66/589 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ Q + A + +G++P+E + +FS N L D G A A+ + + SS +
Sbjct: 40 EFSQTVRRTANAMVALGIEPQENIGIFSQNKPECLFTDFGAFANRAVTIPLYATSSPAQA 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N ++ L V ++ +++ +I+ +V D + ++ +D
Sbjct: 100 QYIINDAQIRYLFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVKDPRDMTSIY-FD 155
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E + + E + ++A + DD+A +YTSGTTG PKGVML H N
Sbjct: 156 EFMAMDEELQ------HNAIVEERTAAASDDDLANILYTSGTTGEPKGVMLHHFNYREAF 209
Query: 235 RSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQP 291
R ++DI D+ +SM LP HV+E+A Y RG+++ + ++++ ++ +P
Sbjct: 210 R-IHDIRLPFMTDQDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRP 268
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M SVP +E +Y+G+Q++I + R+ + I++ + R K
Sbjct: 269 TLMCSVPRFWEKVYAGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKT 320
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDL 409
P ++ L + EK +Y ++ IGI + G ++P I
Sbjct: 321 PPMMLHL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICE 365
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 366 FVHSVGINMVVGYGLTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL----- 418
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
+RG + GY+K P AT A+D DGW +TGD G++ H L L R
Sbjct: 419 ----LRGKTITTGYYKKPEATAAAIDRDGWFHTGDAGYLKDSH-----------LYLTER 463
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD S G+ + P LE I QI VI +++ A+IVP V AK
Sbjct: 464 IKDLFKTSNGKYISPQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKG 523
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I +++ EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 524 IAYSNMDELLQHPKIQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|256839560|ref|ZP_05545069.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738490|gb|EEU51815.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 633
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 277/588 (47%), Gaps = 68/588 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ RF SK+ + + GL +GV+ + ++L S+ W++ + M GA N
Sbjct: 26 KTGKRFEPTTYSKVRDLVYEEGAGLVSLGVRKGDNMALLSEGRNAWIIGELAMFYAGATN 85
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I A+R II+L +A
Sbjct: 86 VPLSIKLEEANDLLFRLVHADVKYIMVSGQQL-KKIRAIKDKLPAVRKIIVL----DELA 140
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
E+P+ EI +G K + + + +++G+DD AT YTSGTT +P
Sbjct: 141 EYQDREMPL---SEIRRMG----KVYLGIHPLEEFLAIGQSLGNDDYATITYTSGTTADP 193
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IEL 274
KGV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 KGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATVQV 253
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ +++ ++P+ ++SVP + + I++ I + +RI +
Sbjct: 254 GRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQGIRAQGKNAVRLFNLALRIGY 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y EG + L PL L +KL++ K++ G
Sbjct: 314 IYNGDSDEEEG----------------------KGFRVFLKPLIRLFDKLLFTKVRENFG 351
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K + GG L + FY A+G+ + GYGL+E++P+I+ P + GS G +
Sbjct: 352 GELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATPIISTNGPRRHTFGSSGVLVRP 411
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D + N VLP G KG + +RG VM GY+KNP++T + E GWL TGD+G++
Sbjct: 412 LDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPASTADTVKE-GWLYTGDMGYMR- 468
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRR 569
G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 469 ----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPY 518
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTISLLYGELRKW 614
A++VP+KE + R + H + S+ +E+ I ++ ++ ++
Sbjct: 519 TTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIRIIQRQIDRF 561
>gi|424842397|ref|ZP_18267022.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
gi|395320595|gb|EJF53516.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
Length = 607
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 151/597 (25%), Positives = 275/597 (46%), Gaps = 78/597 (13%)
Query: 51 FCESKLEQEILDFAEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRS 109
+ K+ + I + GL +G+KP +K++L S +N W + D GM G INV
Sbjct: 35 YSTEKVLELINKVSWGLLQMGMKPGDKIALISYNNRPEWNIMDLGMQQIGVINVPVYPTI 94
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
S ++ ++I+N + V + + +++ + DI
Sbjct: 95 SPDDYVYIFNDATIKYAFVGHGDLLDKV--------------------RTAQSDIPSLQA 134
Query: 170 VFSYDEIIDLGR-----------ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
+F++DE G+ E + D + +K + I ++D+AT +YTSGTTG
Sbjct: 135 IFTFDEADAQGQVDANGQEVSFWEHIWGEHPNMDIIQAHK-DKIKAEDLATIIYTSGTTG 193
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 278
PKGVML+H N+ +R + +P + D LS LP HV+ER Y ++G ++ Y
Sbjct: 194 KPKGVMLSHNNIATNVRDVLPFIPLQPQDIALSFLPICHVFERTVTYSYMAKGAQVFYAK 253
Query: 279 -VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
+ L + LQ +PH+ +VP + E +Y + ++ + + + ++ Y
Sbjct: 254 DLDTLSETLQDIRPHFFTTVPRLLEKVYEKMMLKVQAEGGLKEKIFNWALGLTEKYD--- 310
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG- 396
DW A + AI W +A+KLV+ K++ +G G
Sbjct: 311 ---------------------FDWQ-AAGLEAIKWK---IADKLVFSKVRERLGGRLKGI 345
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIK 454
V+G + P + + A+GV ++ GYGLTE+SP I+ P ++GSVG + ++K
Sbjct: 346 VTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFEPYQAMIGSVGPILPSVQVK 405
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I ++ ++G V V+G+ VM GY++ T + +++GW TGDIG I
Sbjct: 406 IDQDDSY----GPNEGEVLVKGNSVMMGYYRKEDKTAEVFNDEGWFLTGDIGKIV----- 456
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
+++ L + R K+ + S G+ V P +E L+ Q++V+G+ ++ A+I
Sbjct: 457 -ENKKGIKFLKITDRKKELLKTSGGKYVAPTPIESTLKEDLLVEQVMVVGEKRKFVSALI 515
Query: 575 VPDKEEVLMAAKRLSIVHADASE-LSKEKTISLLYGELRKWTSKCSF--QIGPIHVV 628
P+ E + + +I + E ++ K ++ + ++ + S QI H+V
Sbjct: 516 QPNFESLKNWCQDKNIAWSKPEEVITNPKVLAYFQAVINRYNPRFSKVEQIKKFHLV 572
>gi|254392600|ref|ZP_05007777.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294812566|ref|ZP_06771209.1| Putative long chain fatty acid:CoA ligase [Streptomyces
clavuligerus ATCC 27064]
gi|326440981|ref|ZP_08215715.1| putative long chain fatty acid:CoA ligase [Streptomyces
clavuligerus ATCC 27064]
gi|197706264|gb|EDY52076.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294325165|gb|EFG06808.1| Putative long chain fatty acid:CoA ligase [Streptomyces
clavuligerus ATCC 27064]
Length = 629
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 169/588 (28%), Positives = 265/588 (45%), Gaps = 67/588 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+ + + A GL +GV+PE++++L S W++AD G++ G +++EE
Sbjct: 53 SEAAERVHAVAAGLIGLGVEPEDRVALASATRIEWILADLGVMCAGGATTTIYPSTNAEE 112
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVE-EIPVFS 172
+I SES L E+ + E +R ++++ + V PD + E V +
Sbjct: 113 SAYILADSESRVLIAEDAVQLAKARERRAELPGLRHVVVI--DATGVEPDAADPEGWVLT 170
Query: 173 YDEIIDLGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
E+ E+R A+ + + I SD +AT +YTSGTTG PKGV L H N
Sbjct: 171 LAEL-----EARGAAYLAATPGAVKERVGAITSDQLATLIYTSGTTGRPKGVRLPHDNWS 225
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRN----LKDDL 286
+ R++ D LP HV+ G + S IE+ + TAV + D+L
Sbjct: 226 YMARAIGASGLVNADDVQYLWLPLAHVF----GKVLTSGQIEVGHVTAVDGRIDKIIDNL 281
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
QP YM +VP ++E +Y+G+ + A+ + R ++ Y K + F T
Sbjct: 282 PVVQPTYMAAVPRIFEKVYNGVAAKARAGGPAKYKIFRWAAEVAREYA--KAGQDNFRRT 339
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
+ P L A H +A+ LVY K++ A G +A VSG +L
Sbjct: 340 GTRSVPFALSAK----------------HKVADALVYSKLREAFGGRLRAAVSGSAALSP 383
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
I F+ G+ + GYGLTESS G+VG P+ TE++I D
Sbjct: 384 EIGYFFAGAGIHILEGYGLTESSAASFVNPGEAYRTGTVGKPLPGTEVRIAD-------- 435
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G + +RG +MQGY P T + L+ DGWL+TGDIG ++ G L
Sbjct: 436 ---DGEILLRGPGIMQGYHGQPEKTAEVLEPDGWLHTGDIGELS----------TDGYLR 482
Query: 526 LEGRAKDTIVLSTGENVEPLELE-EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
+ R KD I S G+ + P E+E + + IVVIG D+ A+I D+ VL
Sbjct: 483 ITDRKKDLIKTSGGKYIAPTEIEIQFKAACPFVSNIVVIGADRNFCTALIALDEPTVLGW 542
Query: 585 AKRLSIVHADASE-LSKEKTISLLYG-------ELRKWTSKCSFQIGP 624
AK + +E ++ T L+ G L++W + F++ P
Sbjct: 543 AKENGLDGRSYAEVVAAPATRELIQGYAARVNEGLQRWQTIKKFRLLP 590
>gi|451971092|ref|ZP_21924314.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
gi|451932908|gb|EMD80580.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
Length = 602
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 266/582 (45%), Gaps = 69/582 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSE 112
++ Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 39 TQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADIAALQLLGVTVPIYPTNTAAQ 98
Query: 113 ELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
I N V E P+F + + I+ + S ++ E V S
Sbjct: 99 SAYIIDNADVKVLFVGEQPQF-DAAVSIFDQCEQLELIVAM-----SDDIELGEHDFVIS 152
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+ + G + + D+ + E DD+ T +YTSGTTG PKGVML + N+
Sbjct: 153 WQAFVAKGDTTYQVELDA-------RLEQAKDDDLLTLIYTSGTTGQPKGVMLDYANIAA 205
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQP 291
Q+ + D L LP HV+ERA +++ +G Y ++D L + QP
Sbjct: 206 QLEGHDQRLSLSQSDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSQVQP 265
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M +VP YE ++S I +++ + R+++ + + A C + ++Q
Sbjct: 266 TVMCAVPRFYEKIFSAIHEKVSRAPIHRKIMFTWAVNMGAKMAA--------C-HQEKRQ 316
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLF 410
PS + L + LA+KLV K+++ +G + GG L I F
Sbjct: 317 PSLM---------------LRKSYALADKLVLSKLRALLGGKINFMPCGGAKLDETIGRF 361
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 362 FHAIGINVKLGYGMTETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL------ 413
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
VRG VM+GY+K P T++ DE G+L TGD G+I + G L + R
Sbjct: 414 ---VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRI 460
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I
Sbjct: 461 KELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNI 520
Query: 591 VHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ D EL K EK ++ L EL K+ F++ P
Sbjct: 521 KYHDRVELIKHHQVVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|228471964|ref|ZP_04056732.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228276576|gb|EEK15289.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 597
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/588 (26%), Positives = 282/588 (47%), Gaps = 73/588 (12%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
+I + A+ L V +EK+ +F+ NS +W + D A V + +++++ +I
Sbjct: 44 KIQELAKALLHHKVGVQEKVGIFAPNSPQWTMVDMAAAHLRACAVPIYATNTADQAAYII 103
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
N++ L V E + ++A+ ++ +IL + D E+ V + +
Sbjct: 104 NNAGIRILFVGEKEQYEKVAQIKEQCPGLQCVILF----NETLLD-KEDTFVLPLSQFVR 158
Query: 179 LGRESR-KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
G+E + A+++ + DI T +YTSGTTGNPKGV++ ++N+ +Q +
Sbjct: 159 TGQEEEYEQLLKERVAQRNMQ-------DIYTIIYTSGTTGNPKGVLIDYENVAYQFINH 211
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMIS 296
D + G+ LS LP HVYER ++ +G+ Y N + + L+ +PHYM
Sbjct: 212 DDRLAVVEGNVSLSFLPLSHVYERMWVAYVLHKGVINCYLDDTNRVAEVLKEVRPHYMCV 271
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP + E +Y+ I + + S +R+V RI A R +G K+PS+L
Sbjct: 272 VPRLLEKIYTKIYENVEKQSVLKRLVFATATRI--AKIQLGRKKKG-------KKPSFL- 321
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIG 415
L + +A+++V++K+++A+G + + GG+ L I F+ AIG
Sbjct: 322 --------------LQKAYNVADRVVFQKLKAALGGNIQMIPCGGALLEPSIGRFFRAIG 367
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
V V +GYG+TE++ ++ L SVG + + ++KI E NE+L ++
Sbjct: 368 VNVTLGYGMTETTATVSCWDDHKFKLKSVGTLVPNMQVKI--GENNEIL---------LK 416
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G + +GY+ NP +A EDG+L TGD G+I G L + R K+ +
Sbjct: 417 GGSITKGYYNNPEENAKAFTEDGFLRTGDAGYIDKE----------GNLFITERIKELMK 466
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P ++E + S I QI +I ++ A+IVP+ + + AK L++ + +
Sbjct: 467 TSNGKYIAPQQIEGKVGKDSFIEQIAIIADARKYVSALIVPNYDALAEYAKSLNLKYKNY 526
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 635
+EL K +K + L EL + QI ++ PF++N
Sbjct: 527 AELIKNSQIVEFFQKRLQNLQQELASYE-----QIKKFTLLTTPFSIN 569
>gi|449145821|ref|ZP_21776618.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
gi|449078529|gb|EMB49466.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
Length = 601
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 264/570 (46%), Gaps = 79/570 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES-VALAVE 129
G+ ++K+++FS+N RW +AD L A+ V ++ E+ +I ++++ V E
Sbjct: 56 GIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGE 115
Query: 130 NPEFFNRIAE-TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFS 188
P+F +++ C + +R I+ + + D+ + +D+ F
Sbjct: 116 QPQFDAALSQFEHCPE--LRLIVAM-----NPNIDLKQASCAMHWDD-----------FV 157
Query: 189 DSNDARKHYKY----ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
N + H E DD+ T +YTSGTTG PKGVML ++N+ Q+ +
Sbjct: 158 VQNQTKDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLT 217
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 303
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE
Sbjct: 218 QDDVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEK 277
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
++S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 278 IFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL-------- 320
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 422
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LTQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE++ I+ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K T ++ DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYI 472
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 600
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHS 532
Query: 601 ------EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 533 QVLEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|383789327|ref|YP_005473901.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
gi|383105861|gb|AFG36194.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
Length = 645
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 252/553 (45%), Gaps = 73/553 (13%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++++ E A L G +++ S+ S W+V++ + G V + + E
Sbjct: 36 AQVQSESRSVAAALVQRGFAKNNTMAILSEGSPEWIVSEFATIMAGGAAVPLSIKLLANE 95
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAM----RFIILLWGKKSSVAPDIVEEIP 169
+ NHSES L + AE + S + +L A + E
Sbjct: 96 VPFRLNHSESRGLFLSK-----NTAEKIFSVRDQIEDPNYFYVLLDDDPDFADQLAAENN 150
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS----DDIATYVYTSGTTGNPKGVML 225
+ +++ + +E + S DA + + +TI S DDI T YTSGTTGNPKG+ML
Sbjct: 151 LKRGTQLVTI-QELAAEGAGSPDALR--QVDTICSELTEDDIVTVSYTSGTTGNPKGIML 207
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG-----------YFIFSRGIEL 274
H+N + ++ G + L +LP H + G YF+ +RG +
Sbjct: 208 MHRNYIANSSEAIEVFRIPAGYQTLLILPCDHSFAHTVGIYASLVAGISLYFVDARGGSM 267
Query: 275 MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+RN+ +L P ++++VP + IQ + + + IR A
Sbjct: 268 --AILRNIPGNLVETDPTFLLTVPALTGNFMKKIQNGVAAKGSFVNGIFERGIRAGIA-- 323
Query: 335 AFKRIYEGF----CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
R +G+ LTR + + W LLAE LV++K+++
Sbjct: 324 ---RNGDGYHQVPFLTRARH-------FLPW--------------LLAELLVFRKVRTIF 359
Query: 391 GIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
G K VSGG L + F+ A+G+ V GYG+TE+SP+I++ P C LG+ G P
Sbjct: 360 GKKVKFCVSGGALLDLGQQQFFHALGLPVYQGYGMTEASPIISSNHPWCYKLGTSGKPFP 419
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
++K+V + +E P G KG + VRG VM+GY KNP AT++AL DGWL+TGD+G++
Sbjct: 420 TVQVKVVLQDGSEAAP-GEKGQICVRGPNVMKGYLKNPDATEEAL-RDGWLHTGDLGFL- 476
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS-SLIRQIVVIGQDQR 568
G L + GR K ++ + GE P E+EE + I Q ++ R
Sbjct: 477 ---------DADGFLTVSGREKALLISADGEKYSPEEIEEVMTTACPYISQAMLYNDHNR 527
Query: 569 RPGAIIVPDKEEV 581
GA+IVPD + V
Sbjct: 528 FTGALIVPDTDAV 540
>gi|416052822|ref|ZP_11578457.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991614|gb|EGY33077.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 595
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/601 (26%), Positives = 279/601 (46%), Gaps = 74/601 (12%)
Query: 37 TRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
T +R + N+R + ++L+Q++ + L + ++K+ +F+ N RW + D G+L
Sbjct: 22 TALRYFKDNNRLDI-SWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGIL 80
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETL--CSKAAMRFIILLW 154
A+ V + +++++ I N+++ + V + E ++++ + C K +I +
Sbjct: 81 QVRAVTVPIYATNTAKQAQFIINNADMKIIFVGDQEQYDQVLDIADECPK-----LIKIV 135
Query: 155 GKKSSVAPDIVEEIPVFSYDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYT 213
KS++ + E + + I++ E SR D + +D+ T +YT
Sbjct: 136 AMKSTI--HLQEHAKACHWQDFIEMADEQSRPQLQQRLDDK--------CLEDLFTLIYT 185
Query: 214 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIE 273
SGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA ++ RG
Sbjct: 186 SGTTGEPKGVMLDYANLAHQLKAHDQALQVDDTDVSLSFLPLSHIFERAWVAYVLHRGAT 245
Query: 274 LMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
Y N ++ L +P M +VP YE +Y+ I ++ + R+ + ++A
Sbjct: 246 NCYIEDTNQVRAALMEIRPTLMCAVPRFYEKIYAAILDKVHNAPKLRQWI------FNWA 299
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
++ ++ L + QK I +L H LA+KLV K+++ +G
Sbjct: 300 IAVGRKHFDA--LAKQQK----------------IGFLLKQQHALADKLVLGKLRALLGG 341
Query: 393 S-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
+ GG L I LF+ +IG+ +++GYG+TE++ ++ S+G +
Sbjct: 342 RIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWNDFNFNANSIGTLMPGA 401
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
E+KI E NE+L VRG VM+GY+K P T DG+L TGD G
Sbjct: 402 EVKI--GENNEIL---------VRGGMVMKGYYKKPQETADTFTTDGFLKTGDAG----- 445
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
G L + R K+ + + G+ + P LE + I QI VI ++
Sbjct: 446 -----EFDADGNLYITDRIKELMKTANGKYIAPQVLESKIGKDKFIEQIAVIADAKKYVS 500
Query: 572 AIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIG 623
A+IVP + AK+++I + D EL + E+ I+ L EL W F +
Sbjct: 501 ALIVPCYAALEDYAKQVNIKYQDRLELLRNSEIIQMLERRINELQKELAGWEQIKRFTLL 560
Query: 624 P 624
P
Sbjct: 561 P 561
>gi|410867744|ref|YP_006982355.1| AMP-binding enzyme [Propionibacterium acidipropionici ATCC 4875]
gi|410824385|gb|AFV91000.1| AMP-binding enzyme [Propionibacterium acidipropionici ATCC 4875]
Length = 657
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/596 (25%), Positives = 276/596 (46%), Gaps = 55/596 (9%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
R + ++R+ ++ + + A L G+ ++++LF++N W+ D ++ GA+
Sbjct: 57 REDQQWRIRTYAETGRRVQALARALVEHGIARGDRIALFANNCPEWIELDLAIMTVGAVP 116
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V S+ ++L+HI + + + +R+ ++ I+ + + +
Sbjct: 117 VPIYPTSTPDQLVHIVTDAGVRIICLAGASERDRVLSAADRMPSLDAIVTIDPEAADHTG 176
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
+PV S +++ RE+ +A + DA + DD+A+ +YTSGTTG PKG
Sbjct: 177 LPAASLPVHSLSDLVSAPREAGEA--ERLDALVDERMALSAGDDVASLIYTSGTTGAPKG 234
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRN 281
VM+TH+ + Q +L + D L LP H E A I S G Y T +
Sbjct: 235 VMITHRAAMSQPAALDEFFTITASDHSLCFLPLSHALEWAWTMVIISHGCLNTYVTNPKT 294
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI-SFAYTAFKRIY 340
+ L +P ++VP +YE Q+ T + + +R IRI ++ +R +
Sbjct: 295 VASMLAEVRPTLFVTVPKLYE--------QVMTVAREKVSDSRLKIRIFDWSLDVGRRWW 346
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGG 400
+ T ++P + + H +A++LV + ++ A+G K ++ G
Sbjct: 347 Q---TTEAGRRPDVGLRI---------------RHAVADRLVLRAVRDAVGGPKTVLAAG 388
Query: 401 GS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
G+ L ++ F+ +IG+ + GYGLTESSP+++ P + G+ G P+ ++IK
Sbjct: 389 GAPLRQEVEEFFASIGLLICQGYGLTESSPLVSFNSPGAHKFGTAGKPLVGSQIK----- 443
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
+G++G + RG +M+GY+ NP AT + +DGWL+TGDIG +
Sbjct: 444 ------SGAEGEILYRGPNIMKGYWNNPEATASTI-QDGWLHTGDIGHV----------D 486
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G LV+ R KD IV G+N+ P +E L L Q V++G ++ ++ P
Sbjct: 487 DDGYLVITDRLKDIIVTLNGKNISPQPIEGLLLADPLFEQAVILGDNRPCLTLLVKPSMP 546
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFT 633
V A+RL + A L + + + + T+K QI + V+ E FT
Sbjct: 547 HVEEIAERLHLNLALPESLRSPELAEEIRKHVAELTAKLPNQEQIRDLRVLWEDFT 602
>gi|145636795|ref|ZP_01792461.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
gi|145270093|gb|EDK10030.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
Length = 599
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/544 (28%), Positives = 258/544 (47%), Gaps = 63/544 (11%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
IGV ++K+++F+ N RW +AD L AI V + +++++ I NH++ L V
Sbjct: 56 IGV--QDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAEFILNHADVKILFVG 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYDEIIDLGRESRKAFS 188
+ E +++ E ++ I+ + KS++ +++ P+ +++ I G +++
Sbjct: 114 DQEQYDQALEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWESFIKTGSNAQQ--- 164
Query: 189 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK 248
N+ + + + D+ T +YTSGTTG PKGVML + NL HQ+ + + + D
Sbjct: 165 --NELTQRLNQKQLS--DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDI 220
Query: 249 FLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSG 307
LS LP H++ERA +I RG L Y N ++ L +P M +VP YE +Y+
Sbjct: 221 SLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAA 280
Query: 308 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 367
+ ++ + R+++ I + + F L N K +L
Sbjct: 281 VLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKAIPFL------------ 319
Query: 368 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GYG+TE
Sbjct: 320 ---LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTE 376
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
++ ++ S+G + E+KI E NE+L VRG VM+GY+K
Sbjct: 377 TTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKK 425
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
P T Q EDG+L TGD G G L + R K+ + S G+ + P
Sbjct: 426 PEETAQTFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQY 475
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 606
+E + I QI +I ++ A+IVP + + AK+L+I + D EL K I
Sbjct: 476 IESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILK 535
Query: 607 LYGE 610
++ +
Sbjct: 536 MFEQ 539
>gi|319940752|ref|ZP_08015093.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
gi|319805812|gb|EFW02586.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
Length = 609
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 261/566 (46%), Gaps = 89/566 (15%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
R ++ + +L + +L + +G+KP E++++ N + ADQ LA G I
Sbjct: 35 RATGKWESWTYKELGEHVLAWRRAFAAMGLKPGERIAILMPNGRDHVCADQAALANGLIP 94
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V + + I S++ L + +I T ++ II
Sbjct: 95 VPLHAIDTPGASAFITIDSQAATLVTNKLTRWQQIRATGVPLPDLKNII----------- 143
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYK-YETI---GS------------DD 206
I D G K+ + R H + E+I G+ DD
Sbjct: 144 -------------ITDPGETENKS-----EGRFHIRSLESILLEGASWTEDLPAGPLEDD 185
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 266
+A +YTSGTTG PKGVMLTH+N++ +++ + V + GD FLS LP H +ER GY+
Sbjct: 186 LAGIIYTSGTTGRPKGVMLTHRNIVSNVKATLECVSPKVGDTFLSFLPLSHTFERTAGYY 245
Query: 267 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 324
+ + G + Y +V L +DL+ +P +ISVP VYE +Y+ +Q ++ S R +A+
Sbjct: 246 LALATGCIIAYNRSVLLLAEDLKTIKPTVIISVPRVYERIYARVQDKLRKS----RPIAK 301
Query: 325 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 384
L F + A + + FC R P WL I+ A L LH +A L
Sbjct: 302 KL----FDW-AVEVGWRDFC--RKNHLPVEKSGR-SWL-DGIVRATL--LHKMANTL--- 347
Query: 385 KIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 444
+ G + +SGG +L + + +G+ + GYG+TE+SP+IA N +V
Sbjct: 348 -LSQFGGRLRIAISGGAALNHKVARTFCGLGLPIIQGYGMTEASPIIAGNCVEFNQPDTV 406
Query: 445 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 504
G P + EI++ E NE ++VR +M+GY+ P T A +DGWL TGD
Sbjct: 407 GKPFCNVEIRL--GEGNE---------IQVRAPSIMKGYWHRPEDTAAAFTKDGWLKTGD 455
Query: 505 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 564
+G G+L ++GR K+ IV STGE + P +LE A L Q ++G
Sbjct: 456 VG----------EFNADGMLKIKGRIKEIIVTSTGEKIPPADLESAIETDPLFAQAYIVG 505
Query: 565 QDQRRPG--AIIVPDKEEVLMAAKRL 588
+++ G A++ P++ L A+ L
Sbjct: 506 ENKPYLGLLAVVEPNEWASLAASLNL 531
>gi|251791879|ref|YP_003006599.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
gi|247533266|gb|ACS96512.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
Length = 595
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/620 (25%), Positives = 282/620 (45%), Gaps = 71/620 (11%)
Query: 16 SLDYHR-HGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKP 74
L++H H R + V+ A R +++ + ++L+Q+I + L +
Sbjct: 2 DLNFHFIHRVRSQAKTLVNRTALRYF---KDNNWLDISWAELQQQIDQISLALLANHIDI 58
Query: 75 EEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFF 134
++K+ +F+ N RW + D G L A+ V + +++++ I N+++ + V + E +
Sbjct: 59 QDKIGIFAHNMPRWTITDIGTLQIRAVTVPIYATNTAKQAQFIINNADMKIIFVGDQEQY 118
Query: 135 NRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDAR 194
+++ + ++ I+ + K+++ + E + E ID+ E +
Sbjct: 119 DQVIDIAEECPTLQKIVAM---KNTI--HLHEHAKACHWQEFIDMADEQYQV-------E 166
Query: 195 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 254
+ ++ +D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP
Sbjct: 167 LQQRLDSKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDDSDVSLSFLP 226
Query: 255 PWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
H++ERA ++ RG Y N ++ L +P M +VP YE +Y+ I ++
Sbjct: 227 LSHIFERAWVAYVLHRGAANCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVH 286
Query: 314 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 373
+ R+ + + I + L + QK I +L
Sbjct: 287 NAPKLRQWIFHWAMAIGHQHFD--------ALAKGQK----------------IGFLLKQ 322
Query: 374 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 432
+ LA KLV K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 323 QYSLANKLVLGKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVS 382
Query: 433 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 492
S+G + E+KI E NE+L VRG VM+GY+K P T +
Sbjct: 383 CWDDVNFNANSIGSLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETAE 431
Query: 493 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 552
A DG+L TGD G G L + R K+ + S G+ + P LE
Sbjct: 432 AFTADGFLKTGDAG----------EFDANGNLYITDRIKELMKTSNGKYIAPQVLESKIG 481
Query: 553 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTI 604
+ I QI VI ++ A+IVP + AK+++I + D EL K E+ I
Sbjct: 482 KDKFIEQIAVIADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLKNSEIIQMLERRI 541
Query: 605 SLLYGELRKWTSKCSFQIGP 624
+ L EL W F + P
Sbjct: 542 NDLQKELAGWEQIKRFTLLP 561
>gi|296272883|ref|YP_003655514.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
gi|296097057|gb|ADG93007.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
Length = 573
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 154/585 (26%), Positives = 268/585 (45%), Gaps = 85/585 (14%)
Query: 37 TRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
T + N+++ + +++++ L+ +G+K +++FS +S WL+ D +
Sbjct: 24 TLLNFINANNKYESISALQFKEKVICLCAALQNLGIKKGTMVAIFSKSSPFWLIFDFALQ 83
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
GA++V + S++ L S+ + +++ N I E + FI +
Sbjct: 84 QLGAVSVPIFANISTKNLNFELKDSKCKYIFIDDINRINDIKEEII------FITHNF-- 135
Query: 157 KSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGT 216
++E ++ DEII +G+E R Y DDI + VYTSG
Sbjct: 136 -------CIKEKNYYNLDEIIVMGKEICN--------RLEYVEHKPKEDDIFSIVYTSGN 180
Query: 217 TGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY 276
TG+PKGV+L+HKN++ Q++ + +++ + + LS+LP H++ERA + SRG+ + +
Sbjct: 181 TGDPKGVILSHKNIISQVKDINELIQLDKKEVILSILPLAHIFERAVMSYYISRGVSIYF 240
Query: 277 T-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
+ N+ ++ +P M VP + E +Y I+ I +++A SFA+
Sbjct: 241 IDDITNVATLMKTVRPTMMTVVPRLLEKIYYKIKTNISDKPFFSKLIA------SFAF-- 292
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 394
+ L N + S L L + KLVY K + G K
Sbjct: 293 ------HYALKENINKDSILFKLFN-------------------KLVYSKFREIFGGRIK 327
Query: 395 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
VSGG L +I F+ I V + GYG+TE SPVI+ P N +G+ G + E+K
Sbjct: 328 WLVSGGAPLEKNIYQFFLNIEVPLYQGYGMTEFSPVISTNYPGANRVGTSGKAMPTAEVK 387
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I E +E+L V+G +M+GY N TK+ +DE GWL+TGD+ I
Sbjct: 388 I---ENDELL---------VKGPSLMKGYLNNEELTKKTIDEKGWLHTGDVASIDE---- 431
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G + ++ R KD STGE V + +E+ ++ I V+I +++ A++
Sbjct: 432 ------DGYIYIQSRKKDIFKTSTGEYVNAIPIEQELSKNKYIEFAVLISSNRKYTTALL 485
Query: 575 VPDKEEVLMAAKRLSIV---HADASELSK--EKTISLLYGELRKW 614
D E K ++ + + S + K + I L ++ KW
Sbjct: 486 FVDHERYTQHEKSSNLTIDEYFNQSRIQKSIQNHIDRLNKKVNKW 530
>gi|54307638|ref|YP_128658.1| long-chain-fatty-acid-CoAligase [Photobacterium profundum SS9]
gi|46912061|emb|CAG18856.1| putative long-chain-fatty-acid-CoAligase [Photobacterium profundum
SS9]
Length = 604
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 253/552 (45%), Gaps = 65/552 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
++I A + G+ ++K+++FS+N RW V D L + V S ++ ++ ++
Sbjct: 43 EQIQQLAIAMLAHGMNVQDKVAIFSNNMPRWTVTDFAALYNRCVTVPIYSTNTPQQAAYV 102
Query: 118 YNHSESVALAVENPEFFNR---IAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
N ++ L V + IAE C K R + L V PD V S++
Sbjct: 103 LNDADVRLLFVGEQVQLDAAIGIAEG-CPKLE-RIVTL---SDDLVLPD---NPLVCSFN 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ + A + +A + DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 155 DFL-------CAATPELEAELQQRLNDTAMDDLLTLIYTSGTTGTPKGVMLDYANIAAQL 207
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHY 293
+ + GD L LP HV+ERA +++ RG I T LK+ L +P+
Sbjct: 208 AGHDQNLSLDEGDSSLCFLPLSHVFERAWTFYVLHRGAINHYLTDTNQLKEALADVKPNV 267
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP VYE +YS + ++ + R+++ ++A R+ C + +QPS
Sbjct: 268 MAAVPRVYEKIYSTVHDKVSRAPFHRKLI------FTWAVNMGARM--AVC-HQEHRQPS 318
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
L+ + H LA KLV K++ +G + K GG L I F+
Sbjct: 319 KLLTMS---------------HNLANKLVLSKLRDILGGNIKFMPCGGAKLDEGIGRFFH 363
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ V++GYG+TE++ ++ C S+G + EIKI E NE+L
Sbjct: 364 AIGINVKLGYGMTETTATVSCWDDQCFNPDSIGMAMPGAEIKI--GENNEIL-------- 413
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+ P T + EDG+L TGD G G L + R K+
Sbjct: 414 -VRGPMVMRGYYNMPEETAKNFTEDGFLKTGDAGHFDEQ----------GNLFITDRIKE 462
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E A + I QI VI ++ A+IVP + + A+ L+I +
Sbjct: 463 LMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDTLEEHARELNIKY 522
Query: 593 ADASELSKEKTI 604
D EL K I
Sbjct: 523 KDRLELVKNSQI 534
>gi|383110916|ref|ZP_09931734.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
gi|313694486|gb|EFS31321.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
Length = 604
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 262/579 (45%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ ++++ +I+ SV D ++ +DE + G+
Sbjct: 109 RFLFVGEQYQYDAAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMATGKGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ + R E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEERT----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL--- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
+ EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 328 ------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGLEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A++ DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + I QI +I ++ A+IVP V AK I + D +EL
Sbjct: 474 KYVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 534 QHPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|313147826|ref|ZP_07810019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424665955|ref|ZP_18102991.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
gi|313136593|gb|EFR53953.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574208|gb|EKA78959.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
Length = 601
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 271/590 (45%), Gaps = 66/590 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + A + +GV+ EE + +FS N L D A A+ + + SS +
Sbjct: 39 NEFSQTVRQAANAMVELGVQEEENIGIFSQNKPECLFTDFAAFANRAVTIPLYATSSPAQ 98
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ L V ++ ++ +I+ +V D + ++ +
Sbjct: 99 AQYIINDAQIRFLFVGEQFQYDAAFSVFGFCPSLTQLIIF---DPAVVRDPRDMSSIY-F 154
Query: 174 DEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
DE + G++ + AR G+DD+A +YTSGTTG PKGVML H L
Sbjct: 155 DEFLAKGKDLPHNEVVEERTARA-------GADDLANILYTSGTTGEPKGVMLHHSCYLE 207
Query: 233 QIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRY 289
R ++DI + DK +SM LP HV+E+A Y +G+++ + +++ ++
Sbjct: 208 AFR-IHDIRLVDMTDKDVSMNFLPLTHVFEKAWTYLCVHKGVQVCINLRPADIQTTIKEI 266
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M SVP +E +Y+G+Q++I ++ ++++ I++ RI+ L R
Sbjct: 267 RPTLMCSVPRFWEKVYAGVQEKIAETTGIKKMLMLDAIKVG-------RIHNLEYL-RVG 318
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHI 407
K P ++ L + EK +Y ++ IGI + G ++P I
Sbjct: 319 KTPPKMIQL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEI 363
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
F ++G+ + VGYGLTES+ ++ T +GSVG + E+KI E NE+L
Sbjct: 364 CEFVHSVGIDMLVGYGLTESTATVSCTSKTGYDIGSVGQVMPEVEVKI--GEDNEIL--- 418
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
+RG + +GY+K AT A+DE+GW +TGD G+ G L L
Sbjct: 419 ------LRGKTITKGYYKKAEATAAAIDEEGWFHTGDAGYFK-----------NGQLYLT 461
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
R KD S G+ + P LE + I QI +I ++ A+IVP V AK
Sbjct: 462 ERIKDLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKQYAKE 521
Query: 588 LSIVHADASELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
I + D +EL + K I+L + + + QI ++ EPF++
Sbjct: 522 KGIEYKDMTELLEHPKIIALFRARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|317478468|ref|ZP_07937628.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
gi|316905357|gb|EFV27151.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
Length = 601
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 265/589 (44%), Gaps = 66/589 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ Q + A + +G++P+E + +FS N L D G A A+ + + SS +
Sbjct: 40 EFSQTVRRTANAMVALGIEPQENIGIFSQNKPECLFTDFGAFANRAVTIPLYATSSPAQA 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N ++ L V ++ +++ +I+ +V D + ++ +D
Sbjct: 100 QYIINDAQIRYLFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVKDPRDMTSIY-FD 155
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E + + E + ++A + DD+A +YTSGTTG PKGVML H N
Sbjct: 156 EFMAMDEELQ------HNAIVEERTAAASDDDLANILYTSGTTGEPKGVMLHHFNYREAF 209
Query: 235 RSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQP 291
R ++DI D+ +SM LP HV+E+A Y RG+++ + ++++ ++ +P
Sbjct: 210 R-IHDIRLPFMTDQDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRP 268
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M SVP +E +Y+G+Q++I + R+ + I++ + R K
Sbjct: 269 TLMCSVPRFWEKVYAGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKT 320
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDL 409
P ++ L + EK +Y ++ IGI + G ++P I
Sbjct: 321 PPMMLHL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICE 365
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 366 FVHSVGINMVVGYGLTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL----- 418
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
+RG + GY+K P AT A+D DGW +TGD G++ H L L R
Sbjct: 419 ----LRGKTITTGYYKKPEATAAAIDRDGWFHTGDAGYLKDSH-----------LYLTER 463
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD S G+ + P LE I QI VI +++ A+IVP V AK
Sbjct: 464 IKDLFKTSNGKYISPQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKG 523
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + + EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 524 IAYNNMDELLQHSKIQALF-RARIDTLQQQFAHYEQVKRFTLLTEPFSM 571
>gi|262170570|ref|ZP_06038248.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
gi|261891646|gb|EEY37632.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
Length = 601
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 264/570 (46%), Gaps = 79/570 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES-VALAVE 129
G+ ++K+++FS+N RW +AD L A+ V ++ E+ +I ++++ V E
Sbjct: 56 GIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGE 115
Query: 130 NPEFFNRIAE-TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFS 188
P+F +++ C + +R I+ + + D+ + +D+ F
Sbjct: 116 QPQFDAALSQFEHCPE--LRLIVAM-----NPNIDLKQASCAMHWDD-----------FV 157
Query: 189 DSNDARKHYKY----ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
N + H E DD+ T +YTSGTTG PKGVML ++N+ Q+ +
Sbjct: 158 AQNQTQDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLT 217
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 303
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE
Sbjct: 218 QDDVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEK 277
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
++S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 278 IFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL-------- 320
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 422
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LKQNHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE++ I+ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K T ++ DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYI 472
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 600
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHS 532
Query: 601 ------EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 533 QVLEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|333914694|ref|YP_004488426.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333744894|gb|AEF90071.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 647
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/624 (25%), Positives = 287/624 (45%), Gaps = 66/624 (10%)
Query: 32 VDAVATRIRISRRNHRFRVFCESKLEQEILDFAE-GLRVIG---------VKPEEKLSLF 81
V+ +A R++ + +R + E + L++A+ G RV + ++++
Sbjct: 29 VEMLALRVQQTPAGEAYRAYDEDARSWKTLNWAQAGERVALWAQALAAQELPAGSRIAIL 88
Query: 82 SDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETL 141
N + D L G + V + ++ + +I +++ L V +++I T
Sbjct: 89 LPNGLDAMSIDLASLRCGHVPVPLHAIDNAGSIAYILANAQVSMLFVAQQSTWDKICATG 148
Query: 142 CSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYET 201
+ A+R +++ K +S A + E + + + + + + A +
Sbjct: 149 QALPALRKVVVASAKPASRAAEPETEGDAAALEALRQIPVQPLAQWLAEGGAVPLPPPPS 208
Query: 202 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 261
++D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 209 --AEDLAAVVYTSGTTGKPKGVMLTHRNVVSNVQAVMQRLQPRSDDVFLSFLPLSHTFER 266
Query: 262 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 319
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +
Sbjct: 267 TAGYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERVHAKVME--------- 317
Query: 320 RVVARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALIDWLWARIICAILWPL- 374
+ARA ++ A R ++ FC T+ Q + + WL WP+
Sbjct: 318 -TLARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQWL--------PWPVL 368
Query: 375 -HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 433
HL+A+ L+ + G + VSGG L I + +G+ + GYG+TE+SPV+ A
Sbjct: 369 NHLVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPLIQGYGMTETSPVVCA 424
Query: 434 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 493
N +VGH + E++I G ++VRG VM+GY++ P T +
Sbjct: 425 NTLEDNHPATVGHALPGVEVRI-----------GENRELQVRGPCVMRGYWERPEDTAKT 473
Query: 494 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 553
+DGWL TGD I GR R ++GR K+ IV STGE + P +LE A
Sbjct: 474 FTDDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTSTGEKIPPADLELAITG 522
Query: 554 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 613
Q+ V+G+D+ A+ V ++ E A+RL + D L+ + K
Sbjct: 523 DPFFTQVFVVGEDRPFIAAVAVIERGEWQAMAQRLGLDPEDPKSLNHSAAEREALARIEK 582
Query: 614 WTSKCSFQIGP--IHVVDEPFTVN 635
+ + P +H+ EP+T+
Sbjct: 583 QVASFARYAVPRAVHLELEPWTIE 606
>gi|429888249|ref|ZP_19369739.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
gi|429224692|gb|EKY31030.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
Length = 601
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G + + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNVFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|160885360|ref|ZP_02066363.1| hypothetical protein BACOVA_03359 [Bacteroides ovatus ATCC 8483]
gi|156108982|gb|EDO10727.1| AMP-binding enzyme [Bacteroides ovatus ATCC 8483]
Length = 604
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 261/579 (45%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A + + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRVVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ ++++ +I+ SV D ++ +DE + +G
Sbjct: 109 RFLFVGEQYQYDAAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ + R E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEERT----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIRVG-------RIH-NLDYLRQGKTPPVMNQL--- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
+ EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 328 ------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEGNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A++ DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + I QI +I ++ A+IVP V AK I + D +EL
Sbjct: 474 KYVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 534 QHPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|426405050|ref|YP_007024021.1| long-chain fatty acid CoA ligase (AMP-binding) [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425861718|gb|AFY02754.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 593
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 151/562 (26%), Positives = 262/562 (46%), Gaps = 68/562 (12%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
L +G+KP +++++ ++ W D G+ AI V ++++++ +I N+SES
Sbjct: 50 ALLSLGIKPGDRVAIMANTRLEWSTTDLGIFGIKAITVPIYQNNTADDVEYILNNSESRI 109
Query: 126 LAVEN--PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L E+ P + C K +K V + ++ +++ +G++
Sbjct: 110 LICESRGPLKTFESVKAKCPKV----------EKVIVFDETCPNPEAITWPKLLQMGKD- 158
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+ + ++ ++ +DIAT +YTSGTTG PKGV++TH + ++ + + A
Sbjct: 159 ---YLAKHPSQFQELCASLTQEDIATILYTSGTTGRPKGVVMTHLQAISEVSEAFPLCGA 215
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 302
D LS LP H+ R + G L + ++ ++ +L +P +++SVP ++E
Sbjct: 216 TEADTSLSFLPYAHILGRIEHWGHAYIGFTLAFAESLEKMRGNLTEVRPTFLMSVPRIFE 275
Query: 303 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 362
+Y+ + QI T ++ + L K Y ++
Sbjct: 276 KIYAAVTAQIQTQPLKMKIF-------------------NWALEVGTKVGDYKMS----- 311
Query: 363 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 421
+++ L + LA+KLV KI +A G + +SGG +P I LF+ A GV + G
Sbjct: 312 -GQVLPLDLLVKYELAKKLVLDKIPTAFGGRLRFAISGGAPIPREIALFFHAAGVLILEG 370
Query: 422 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 481
YGLTE++ I P GSVG PI ++KI AE E++ V+ +VM+
Sbjct: 371 YGLTETTAAITVNTPFNYKFGSVGRPIGEVKLKI--AEDGEIM---------VKSDKVMK 419
Query: 482 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 541
Y+KNP ATK+A DGW +TGDIG I P GG L + R KD I + G+
Sbjct: 420 EYYKNPEATKEAFT-DGWFHTGDIGEILP----------GGDLKITDRKKDLIKTAGGKY 468
Query: 542 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 601
V P LE S I ++V G ++ A++ D+ V AK I ++D + L +
Sbjct: 469 VAPQRLEGLLSLSPYIANVLVHGDQKKYIVALVTLDRPTVENLAKEKQINYSDWNSLVQS 528
Query: 602 KTISLLYGELRKWTSKCSFQIG 623
++ L +RK ++ + Q+
Sbjct: 529 PFVAEL---IRKAVAETNTQLA 547
>gi|433656674|ref|YP_007274053.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432507362|gb|AGB08879.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 602
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 262/583 (44%), Gaps = 79/583 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
I N V E P+F ++ E L AM I L ++
Sbjct: 103 IDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFTI----------- 151
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
S+ + + G S +A D + E DD+ T +YTSGTTG PKGVML + N+
Sbjct: 152 SWKDFVAKGDTSHQAELDE-------RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIA 204
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 290
Q+ + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 AQLEGHDQRLSLSQDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVR 264
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE ++S I +++ + R+++ F + C + ++
Sbjct: 265 PTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKR 315
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 409
+PS + L H LA+KLV K+++ +G + GG L I
Sbjct: 316 KPSMM---------------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGR 360
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E NE+L
Sbjct: 361 FFHAIGINVKLGYGMTETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL----- 413
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T++ DE G+L TGD G I + G L + R
Sbjct: 414 ----VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDR 459
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELN 519
Query: 590 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IAYHDRVELIKHHQVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|262275041|ref|ZP_06052852.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
gi|262221604|gb|EEY72918.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
Length = 597
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 158/585 (27%), Positives = 261/585 (44%), Gaps = 95/585 (16%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
+ + V G+ ++K+ +F++N W +AD L + V +++E+ +I
Sbjct: 48 SRAMLVSGLAVQDKIGIFANNCAEWSIADIAALQVRCVPVPIYPTNTAEQAAYILR---- 103
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV--APDIVEEIP----VFSYDEII 177
A +R IL G +S V A I + P + S+D+ +
Sbjct: 104 --------------------DAGVR--ILFVGDQSQVDAAMSIADSCPSLEKIVSFDDNV 141
Query: 178 DLGRESR--------KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
D + + +D+ D + + DD+ T +YTSGTTG PKGVML + N
Sbjct: 142 DFAGHAMGMGWRCFLQTANDNVDPEFNKRLADAAMDDLMTLIYTSGTTGEPKGVMLDYAN 201
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQR 288
+ QI S ++ + L+ LP HV+ER +++ G Y + +++ LQ
Sbjct: 202 IAAQIESHDQVLGISENEVSLAFLPLSHVFERCWTFYVLHHGATNCYLSNTYAIREALQD 261
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P M +VP YE +YS + +++ T++ ++ + RA + I +TR
Sbjct: 262 VKPTVMCAVPRFYEKIYSAVHEKVATANPVKKGMFRAAVSIGNLMAE---------ITRK 312
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHI 407
K+P+ WL + H +A+KLV K++ +G + + GG L I
Sbjct: 313 GKKPA------PWLKS---------AHRMADKLVLSKLRELLGGNITMMPCGGAKLEPAI 357
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
F+ AIGV V++GYG+TE++ ++ S+G P+ + E+KI E NE+L
Sbjct: 358 GRFFHAIGVNVKLGYGMTETTATVSCWDSGSFDPDSIGMPMPNAEVKI--GENNEIL--- 412
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
VRG VM+GY+ P T +DG+L TGD G I G L +
Sbjct: 413 ------VRGPMVMRGYYNKPKETADTFTKDGFLKTGDAGHI----------DAKGNLFIT 456
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
R K+ + S G+ + P +E + I QI V+ + A+IVP E + AK
Sbjct: 457 DRIKELMKTSGGKYIAPQMIEGKLGKDHFIEQIAVVADARHFVSALIVPCFETLESWAKE 516
Query: 588 LSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
L+I + D EL K EK ++ L EL K+ F + P
Sbjct: 517 LNIKYHDRMELIKHSEVVELFEKRLAELQKELAKFEQVKKFTLLP 561
>gi|120600799|ref|YP_965373.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
gi|120560892|gb|ABM26819.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
Length = 598
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 259/544 (47%), Gaps = 73/544 (13%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+ L +GV+ +++ + S N +W AD G L + AI V S+ E+ I N + +
Sbjct: 50 AQVLIELGVQVQDRCVILSQNCPQWTCADIGTLKSRAIVVPIYPTSTIEQASFIVNDAAA 109
Query: 124 VALAVENPEFFNRIAE--TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR 181
+ V++ + + E T+C ++ +I+ SSV + + D ++ G
Sbjct: 110 KVIFVDDAKQYAMACELQTICP--SLEHVIVF---DSSVTLAADKGNQHWHLDTLLAGGY 164
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
+ +A + + E DD+ T +YTSGTTG+PKGVML ++N+ IR +
Sbjct: 165 --------TQEAELNQRLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKL 216
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLV 300
+GD L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP
Sbjct: 217 AFSSGDVSLAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRF 276
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
E +YS +Q ++ S +R+ + +R+ +R +E Q++ +
Sbjct: 277 LEKVYSAVQDKVAKSPESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL---- 321
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
WL ++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V
Sbjct: 322 WL------SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVL 372
Query: 420 VGYGLTESSPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GYG+TE++ + TCN L GS G P+ TEIK+ + +E+L V
Sbjct: 373 CGYGMTETNATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------V 416
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG+ VM+GY+ P T A EDGWL TGD G G L + R K+ +
Sbjct: 417 RGATVMRGYYNRPEDTAAAF-EDGWLKTGDAGRF----------DANGNLFITDRIKELM 465
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E R I Q+ +I + A+IVP E + AK + +
Sbjct: 466 KTSNGKYIAPQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYES 525
Query: 595 ASEL 598
+ EL
Sbjct: 526 SLEL 529
>gi|146291172|ref|YP_001181596.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
gi|145562862|gb|ABP73797.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
Length = 598
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 154/542 (28%), Positives = 257/542 (47%), Gaps = 69/542 (12%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+ L +GV+ +++ + S N +W AD G L + AI V S+ E+ I N + +
Sbjct: 50 AQVLIELGVQVQDRCVILSQNCPQWTCADIGTLKSRAIVVPIYPTSTIEQASFIVNDAAA 109
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+ V++ + + E ++ +I+ SSV + + D ++ G
Sbjct: 110 KVIFVDDAKQYAMACELQTICPSLEHVIVF---DSSVTLAADKGNQHWHLDTLLAGGY-- 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
+ +A + + E DD+ T +YTSGTTG+PKGVML ++N+ IR +
Sbjct: 165 ------TQEAELNQRLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAF 218
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYE 302
+GD L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP E
Sbjct: 219 SSGDVSLAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLE 278
Query: 303 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 362
+YS +Q ++ S +R+ + +R+ +R +E + + + + S L
Sbjct: 279 KVYSAVQDKVAKSPESRKKMFAWAMRVG------ERQFE---VGQRRAKGS--------L 321
Query: 363 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 421
W ++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V G
Sbjct: 322 W----LSLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCG 374
Query: 422 YGLTESSPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
YG+TE++ + TCN L GS G P+ TEIK+ + +E+L VRG
Sbjct: 375 YGMTETNATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRG 418
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
+ VM+GY+ P T A EDGWL TGD G G L + R K+ +
Sbjct: 419 ATVMRGYYNRPEDTAAAF-EDGWLKTGDAGRF----------DANGNLFITDRIKELMKT 467
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
S G+ + P +E R I Q+ +I + A+IVP E + AK + + +
Sbjct: 468 SNGKYIAPQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSL 527
Query: 597 EL 598
EL
Sbjct: 528 EL 529
>gi|303257838|ref|ZP_07343848.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|302859441|gb|EFL82522.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
Length = 615
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 170/611 (27%), Positives = 280/611 (45%), Gaps = 84/611 (13%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
+ + + ++ +L LD+A G+K +++++ N + DQG L G
Sbjct: 40 QFNAKTKQWETLSFKELYARALDWANAFVASGLKKGDRVAMLLPNGIDAVCFDQGALIVG 99
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
+ V + +I S++ L N ++ I T + +R ++ + +
Sbjct: 100 LVPVPLHIIDTPANCAYILEDSDTKLLVTVNRARWHAIQATGADLSQLRTVVYIDDESEP 159
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ E+ + E + G ES + +D+A VYTSGTTG
Sbjct: 160 ES----NEVRSVNVAEWLKEG-ESVLTLPPGPE-----------EEDLAALVYTSGTTGK 203
Query: 220 PKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERACGYFI---------FS 269
PKGVMLTHKN++ I + LY+I P + D +LS LP H +ER Y+I FS
Sbjct: 204 PKGVMLTHKNIMSDISALLYNIAPNPS-DTWLSFLPLSHTFERTTSYYIGLGMGNKVTFS 262
Query: 270 RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 329
RG V + DDL+ +P M+SVP V+E + + I +++ A R+V A +
Sbjct: 263 RG-------VARILDDLKLVRPSIMMSVPRVFEKVAAKINERLKQKGAVSRLVFNAAVDA 315
Query: 330 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 389
Y FC S + A D L + L +KLV +I+++
Sbjct: 316 G---------YRNFCRCNGLPVDSAVPAAFDRL-----------MDPLYDKLVRNQIKNS 355
Query: 390 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 448
G + VSGG +L + +G+++ GYG+TE+SP+I+ + N +VG +
Sbjct: 356 FGGRMRVAVSGGAALSPEVAKTIIGLGIEIFQGYGMTETSPIISVNKIGANHPDTVGPIL 415
Query: 449 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 508
E K+ E +E+L VRG QVM+GY+K P T + LD +GWL+TGD I
Sbjct: 416 EGIEAKL--GEKDELL---------VRGPQVMRGYWKRPEDTFKTLDPEGWLSTGDQADI 464
Query: 509 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 568
P G L ++GR K+ IV STGE V P+++E+A L Q +V G ++
Sbjct: 465 LP----------GNYLKIKGRIKEIIVTSTGEKVPPVDIEQAIETDPLFDQAMVYGDNRP 514
Query: 569 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC-SF-QIG--- 623
++V +K+ L++ D L+ + I + L++ + C SF Q G
Sbjct: 515 FIVGLLVLNKDNFERFVVSLNLDPKDPEILTNKAVIREI---LKRIKTACKSFPQYGVPR 571
Query: 624 PIHVVDEPFTV 634
+ ++ EP+T+
Sbjct: 572 SVLLLKEPWTI 582
>gi|330998740|ref|ZP_08322468.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|329576237|gb|EGG57753.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 615
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 170/611 (27%), Positives = 280/611 (45%), Gaps = 84/611 (13%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
+ + + ++ +L LD+A G+K +++++ N + DQG L G
Sbjct: 40 QFNAKTKQWETLSFKELYARALDWANAFVASGLKKGDRVAMLLPNGIDAVCFDQGALIVG 99
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
+ V + +I S++ L N ++ I T + +R ++ + +
Sbjct: 100 LVPVPLHIIDTPANCAYILEDSDTKLLVTVNRARWHAIQATGADLSQLRTVVYIDDESEP 159
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
+ E+ + E + G ES + +D+A VYTSGTTG
Sbjct: 160 ES----NEVRSVNVAEWLKEG-ESVLTLPPGPE-----------EEDLAALVYTSGTTGK 203
Query: 220 PKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERACGYFI---------FS 269
PKGVMLTHKN++ I + LY+I P + D +LS LP H +ER Y+I FS
Sbjct: 204 PKGVMLTHKNIMSDISALLYNIAPNPS-DTWLSFLPLSHTFERTTSYYIGLGMGNKVTFS 262
Query: 270 RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 329
RG V + DDL+ +P M+SVP V+E + + I +++ A R+V A +
Sbjct: 263 RG-------VARILDDLKLVRPSIMMSVPRVFEKVAAKINERLKQKGAVSRLVFNAAVDA 315
Query: 330 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 389
Y FC S + A D L + L +KLV +I+++
Sbjct: 316 G---------YRNFCRCNGLPVDSAVPAAFDRL-----------MDPLYDKLVRNQIKNS 355
Query: 390 I-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 448
G + VSGG +L + +G+++ GYG+TE+SP+I+ + N +VG +
Sbjct: 356 FGGRMRVAVSGGAALSPEVAKTIIGLGIEIFQGYGMTETSPIISVNKIEANHPDTVGPIL 415
Query: 449 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 508
E K+ E +E+L VRG QVM+GY+K P T + LD +GWL+TGD I
Sbjct: 416 EGIEAKL--GEKDELL---------VRGPQVMRGYWKRPEDTFKTLDPEGWLSTGDQADI 464
Query: 509 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 568
P G L ++GR K+ IV STGE V P+++E+A L Q +V G ++
Sbjct: 465 LP----------GNYLKIKGRIKEIIVTSTGEKVPPVDIEQAIETDPLFDQAMVYGDNRP 514
Query: 569 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC-SF-QIG--- 623
++V +K+ L++ D L+ + I + L++ + C SF Q G
Sbjct: 515 FIVGLLVLNKDNFERFVVSLNLDPKDPEILTNKAVIREI---LKRIKTACKSFPQYGVPR 571
Query: 624 PIHVVDEPFTV 634
+ ++ EP+T+
Sbjct: 572 SVLLLKEPWTI 582
>gi|254229751|ref|ZP_04923159.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262392424|ref|YP_003284278.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151937718|gb|EDN56568.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262336018|gb|ACY49813.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 602
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 161/623 (25%), Positives = 282/623 (45%), Gaps = 73/623 (11%)
Query: 14 LSSLDYHRHGFRVFTRNCVDAVATRIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGV 72
++ LD+H R + TR+ + + + ++ ++ Q++ + L G+
Sbjct: 1 MAKLDFH---IVKRIREQIANGGTRVALKHKVDEEWQGITWTQFGQQVDALSLALLAQGL 57
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLHIYNHSESVALAVENP 131
++K+ +FS+N +W +AD L + V + + ++++ I N V E P
Sbjct: 58 GVQDKIGIFSNNMPQWTIADIAALQLRGVTVPIYPTNTAAQSAYIIDNADVKVLFVGEQP 117
Query: 132 EFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSN 191
+F + + I+ + S ++ E V S+ + G + + D+
Sbjct: 118 QF-DAAVSIFDQCEQLELIVAM-----SDDIELGEHDFVISWQAFVAKGDTTYQVELDA- 170
Query: 192 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 251
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L
Sbjct: 171 ------RLEQAKEDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLC 224
Query: 252 MLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 310
LP HV+ERA +++ +G Y ++D L + +P M +VP YE ++S I +
Sbjct: 225 FLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIFSAIHE 284
Query: 311 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 370
++ + R+++ + + A C + ++QPS +
Sbjct: 285 KVSRAPIHRKIMFTWAVNMGAKMAA--------C-HQEKRQPSLM--------------- 320
Query: 371 LWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++
Sbjct: 321 LRKSYALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA 380
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 489
++ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 381 TVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEE 429
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T++ DE G+L TGD G+I + G L + R K+ + S G+ + P +E
Sbjct: 430 TEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEG 479
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------E 601
A + I QI VI ++ A+IVP + + AK L+I + D EL K E
Sbjct: 480 AIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLE 539
Query: 602 KTISLLYGELRKWTSKCSFQIGP 624
K ++ L EL K+ F++ P
Sbjct: 540 KRVNDLQKELAKFEQVKKFKLLP 562
>gi|386315854|ref|YP_006012019.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
gi|319428479|gb|ADV56553.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
Length = 598
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 259/544 (47%), Gaps = 73/544 (13%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+ L +GV+ +++ + S N +W AD G L + AI V S+ E+ I N + +
Sbjct: 50 AQVLIELGVQVQDRCVILSQNCPQWTCADIGTLKSRAIVVPIYPTSTIEQASFIVNDAAA 109
Query: 124 VALAVENPEFFNRIAE--TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR 181
+ V++ + + E T+C ++ +I+ SSV + + D ++
Sbjct: 110 KVIFVDDAKQYAMACELQTICP--SLEHVIVF---DSSVTLAADKGNQHWHLDTLL---- 160
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
A + +A + + E DD+ T +YTSGTTG+PKGVML ++N+ IR +
Sbjct: 161 ----AGCYTQEAELNQRLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKL 216
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLV 300
+GD L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP
Sbjct: 217 AFSSGDVSLAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRF 276
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
E +YS +Q ++ S +R+ + +R+ +R +E Q++ +
Sbjct: 277 LEKVYSAVQDKVAKSPESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL---- 321
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
WL ++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V
Sbjct: 322 WL------SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVL 372
Query: 420 VGYGLTESSPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
GYG+TE++ + TCN L GS G P+ TEIK+ + +E+L V
Sbjct: 373 CGYGMTETNATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------V 416
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG+ VM+GY+ P T A EDGWL TGD G G L + R K+ +
Sbjct: 417 RGATVMRGYYNRPEDTAAAF-EDGWLKTGDAGRF----------DANGNLFITDRIKELM 465
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E R I Q+ +I + A+IVP E + AK + +
Sbjct: 466 KTSNGKYIAPQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYES 525
Query: 595 ASEL 598
+ EL
Sbjct: 526 SLEL 529
>gi|28897125|ref|NP_796730.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260361698|ref|ZP_05774725.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
gi|260878037|ref|ZP_05890392.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|260896932|ref|ZP_05905428.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|260903404|ref|ZP_05911799.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|28805334|dbj|BAC58614.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308088769|gb|EFO38464.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|308089896|gb|EFO39591.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|308109048|gb|EFO46588.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|308115498|gb|EFO53038.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
Length = 602
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 262/583 (44%), Gaps = 79/583 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
I N V E P+F ++ E L AM I L ++
Sbjct: 103 IDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFAI----------- 151
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
S+ + + G S +A D + E DD+ T +YTSGTTG PKGVML + N+
Sbjct: 152 SWKDFVAKGDTSHQAELDE-------RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIA 204
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 290
Q+ + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 AQLEGHDQRLSLSQDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVR 264
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE ++S I +++ + R+++ F + C + ++
Sbjct: 265 PTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKR 315
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 409
+PS + L H LA+KLV K+++ +G + GG L I
Sbjct: 316 KPSMM---------------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGR 360
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E NE+L
Sbjct: 361 FFHAIGINVKLGYGMTETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL----- 413
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T++ DE G+L TGD G I + G L + R
Sbjct: 414 ----VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDR 459
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELN 519
Query: 590 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IAYHDRVELIKHHQVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|262405353|ref|ZP_06081903.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293370545|ref|ZP_06617097.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|294644597|ref|ZP_06722350.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294810339|ref|ZP_06769000.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|336404562|ref|ZP_08585255.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
gi|345507938|ref|ZP_08787579.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|229442559|gb|EEO48350.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|262356228|gb|EEZ05318.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292634279|gb|EFF52816.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|292640034|gb|EFF58299.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294442447|gb|EFG11253.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|335941466|gb|EGN03319.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
Length = 604
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 260/579 (44%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ +++ +I+ SV D ++ +DE + +G
Sbjct: 109 RFLFVGEQYQYDAAFSIFGFCTSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ + R E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEERT----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL--- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
+ EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 328 ------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A++ DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + I QI +I ++ A+IVP V A+ I + D EL
Sbjct: 474 KYVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
K I L+ R T + F QI ++ EPF++
Sbjct: 534 KHPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|295086341|emb|CBK67864.1| Long-chain acyl-CoA synthetases (AMP-forming) [Bacteroides
xylanisolvens XB1A]
Length = 604
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 260/579 (44%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ +++ +I+ SV D ++ +DE + +G
Sbjct: 109 RFLFVGEQYQYDAAFSIFGFCTSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ + R E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEERT----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 279 EKVYAGVQEKINETAGLKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL--- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
+ EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 328 ------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A++ DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + I QI +I ++ A+IVP V A+ I + D EL
Sbjct: 474 KYVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
K I L+ R T + F QI ++ EPF++
Sbjct: 534 KHPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|153216942|ref|ZP_01950706.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|419830916|ref|ZP_14354401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|419834601|ref|ZP_14358055.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|422918315|ref|ZP_16952629.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|423823214|ref|ZP_17717222.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|423857175|ref|ZP_17721024.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|423884451|ref|ZP_17724618.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|423998737|ref|ZP_17741987.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|424017639|ref|ZP_17757465.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|424020556|ref|ZP_17760337.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|424625937|ref|ZP_18064396.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|424630421|ref|ZP_18068703.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|424634468|ref|ZP_18072566.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|424637547|ref|ZP_18075553.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|424641450|ref|ZP_18079330.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|424649523|ref|ZP_18087183.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|443528441|ref|ZP_21094477.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
gi|124114037|gb|EAY32857.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|341635360|gb|EGS60078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|408011114|gb|EKG48950.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|408017056|gb|EKG54578.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|408022056|gb|EKG59285.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|408022492|gb|EKG59701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|408031293|gb|EKG67929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|408053493|gb|EKG88507.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|408620689|gb|EKK93701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|408634322|gb|EKL06585.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|408639779|gb|EKL11586.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|408640101|gb|EKL11902.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|408648734|gb|EKL20069.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|408852179|gb|EKL92023.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|408858681|gb|EKL98353.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|408866754|gb|EKM06131.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|443453260|gb|ELT17091.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
Length = 601
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A ++ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|269956791|ref|YP_003326580.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305472|gb|ACZ31022.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 606
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 242/530 (45%), Gaps = 75/530 (14%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ + ++ A+GL +GV P + + + S W + D A GA+ V SS+E++
Sbjct: 50 EFDAAVVAAAKGLVALGVGPGDSVGIMSRTRYEWTLLDFAAWAAGAVPVPIYETSSAEQV 109
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
I + + L VE+ E +AE A R E+ V D
Sbjct: 110 QWILSDAAVTVLVVESAENAATVAEVRDQVPACR------------------EVLVIDDD 151
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ GR + A +D DA + DDIAT +YTSGTTG PKG LTH+N +
Sbjct: 152 AV---GRLT-AAGADVPDAEIERRRSLATLDDIATIIYTSGTTGRPKGAELTHRNFVSLT 207
Query: 235 RSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQ 290
+ VP A G + L LP HV+ R G L ++ +R L DDL ++
Sbjct: 208 TNTVPEVPEVFAAPGGRTLLFLPLAHVFARFVEVLAIRSGTVLAHSPDIRTLVDDLGAFR 267
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P Y+++VP V+E +Y +SA + A ++I F + A I L K
Sbjct: 268 PTYILAVPRVFEKVY---------NSAEQTAAAGGKLKI-FRWAAATAIRWSRALD-TAK 316
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDL 409
PS WL + H +A+ LVY K+++ + G ++ VSGGG L +
Sbjct: 317 GPSA------WLSVQ---------HKVADALVYGKLRAKLGGQTRYAVSGGGPLGERLGH 361
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
FY IG+ V GYGLTE++ RP +G+VG + ++I A E+L
Sbjct: 362 FYRGIGLTVLEGYGLTETTAPTCVNRPAALRIGTVGLQLPGCGVRI--APDGEIL----- 414
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
++G V +GY NP AT +A D + W TGD+G S G L + GR
Sbjct: 415 ----LKGHHVFRGYHNNPQATAEAFDGE-WFRTGDLG----------SLDDEGFLRITGR 459
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
K+ IV + G+NV P LE+ +L+ Q VV+G ++ GA++ D E
Sbjct: 460 KKEIIVTAAGKNVAPAVLEDRLRAHALVSQCVVVGDNRPFIGALVTLDPE 509
>gi|325955427|ref|YP_004239087.1| long-chain-fatty-acid--CoA ligase [Weeksella virosa DSM 16922]
gi|323438045|gb|ADX68509.1| Long-chain-fatty-acid--CoA ligase [Weeksella virosa DSM 16922]
Length = 587
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/547 (26%), Positives = 250/547 (45%), Gaps = 73/547 (13%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATG 99
+S+ N ++ + + F+ GL +G+KP++K+ + + +N W + D GM G
Sbjct: 24 VSKVNGEWKKTSTQEYVNKANTFSRGLLKLGIKPQDKIGIVTANNRTEWNICDMGMQQVG 83
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
I+V S ++ ++ ++SE V + + ++++ + + + I L
Sbjct: 84 VISVPLYPTLSPKDYEYVLSNSECKICIVSDKDLYDKVLQAKQNVPTLTGIYLF------ 137
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
D V +P ++ EI+DLG + DS + + + DIAT +YTSGTTG
Sbjct: 138 ---DDVAGLP--NWQEILDLGAD------DSTQSEVEALKNLVKAQDIATIIYTSGTTGK 186
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT- 277
PKGV+L+H+N++ + VP + + LS LP H+ ER Y SRGI + Y
Sbjct: 187 PKGVVLSHENIVSNVLMSTPAVPNLPSPSRALSFLPINHILERMIVYLYLSRGIGIYYAE 246
Query: 278 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
++ L D+L+ +PH VP V E +Y I + + + + ++ Y F+
Sbjct: 247 SIDKLGDNLKEVKPHVFTVVPRVVEKVYDKIYTTGANAGGLKTKIFMWALSLAKEYQPFE 306
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG- 396
++ GF K +A+KLV+ K + +G
Sbjct: 307 KL--GFMQKLKMK--------------------------IADKLVFTKWREGVGGEVVCL 338
Query: 397 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV--LGSVGHPINHTEIK 454
VSG L H+ + G+ V GYGL+E+SPVI+ N +G+VG + ++K
Sbjct: 339 VSGSAPLSAHLSRIFWGAGIPVLEGYGLSETSPVISVNMMKKNSFGIGTVGPVLKGIDVK 398
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
G G + V+G V + Y+ +P T +A DG+ TGDIG +
Sbjct: 399 F-----------GEDGEILVKGPNVFKEYYNDPEKTSEAFTADGYFKTGDIGVLE----- 442
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 574
G+L + R K+ S G+ + P ++E +S I QI+V+G+ ++ P A+I
Sbjct: 443 ------NGLLKITDRKKEMFKTSGGKYIAPQQIENLFKQSPYIEQIMVVGEGEKMPTAMI 496
Query: 575 VPDKEEV 581
P E++
Sbjct: 497 QPSFEKL 503
>gi|237720321|ref|ZP_04550802.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|336415414|ref|ZP_08595754.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|423290471|ref|ZP_17269320.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|423294228|ref|ZP_17272355.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
gi|229450072|gb|EEO55863.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|335941010|gb|EGN02872.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|392665858|gb|EIY59381.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|392675419|gb|EIY68860.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
Length = 604
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 261/579 (45%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ ++++ +I+ SV D ++ +DE + G
Sbjct: 109 RFLFVGEQYQYDAAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMATGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ + R E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEERT----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL--- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
+ EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 328 ------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A++ DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + I QI +I ++ A+IVP V AK I + D +EL
Sbjct: 474 KYVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 534 QHPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|291513979|emb|CBK63189.1| Long-chain acyl-CoA synthetases (AMP-forming) [Alistipes shahii WAL
8301]
Length = 635
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 170/623 (27%), Positives = 296/623 (47%), Gaps = 90/623 (14%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGA 100
+ +R+H+F ++ ++ L+ GL +G++P +K+++ ++ S W++++ G+ GA
Sbjct: 23 LEKRHHKFEPTTYAETREQALEAGAGLAALGIRPGDKVAILAEGSNAWIISELGLFYAGA 82
Query: 101 INVVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
++V + S +LL H+E A+ V + +I + +I+L
Sbjct: 83 VSVPLSVKLEESNDLLFRMRHAEVKAVFVSKHQL-PKIRRIRAGLPQLEQVIVLG----- 136
Query: 160 VAPDIVEEIPVFSYDEIIDLGRE----SRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
I E +Y + LGRE +++ F + A I +DD AT YTSG
Sbjct: 137 ---HIPLESGETAYGTLKRLGREYLAKNKEEFMEIGQA--------IRNDDYATITYTSG 185
Query: 216 TTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF---- 268
TT +PKGV+LTH+N + Q S DI P + L +LP H + G++I
Sbjct: 186 TTSDPKGVILTHRNYTANVEQALSRVDIPPH---FRTLIILPLDHCFAHVVGFYIMIACG 242
Query: 269 ------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 322
G M T ++N+ +++ QPH+++SVP + + I+ I +
Sbjct: 243 ASVATVQIGATPMET-LKNIPQNIREVQPHFLLSVPALAKNFRKNIESSIRAKGRFTEAL 301
Query: 323 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 382
+R ++AY + +G+ W RI+ A P+ + + L+
Sbjct: 302 FNLALRTAYAYNS-----DGYGRGSG--------------W-RIVLA---PVVGIFDALL 338
Query: 383 YKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT--CN 439
++K++ A G GGG+L + F+ AIG+ + GYGL+E++PVI+ P +
Sbjct: 339 FRKVRQAFGGHLEFFVGGGALLDAELQRFFYAIGIPMFQGYGLSEATPVISTNSPKHHWH 398
Query: 440 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 499
GS G + ++KI+D E EV P G KG + VRG VM GY+KNP AT + + DGW
Sbjct: 399 RFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVVRGENVMAGYWKNPGATAETV-RDGW 456
Query: 500 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIR 558
L+TGD+G+++ L + GR K ++ S GE P +EEA + +S I
Sbjct: 457 LHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYSPEGMEEAIVDKSPYID 506
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 618
QI+V GAI+VP++E + + A+ + ++ E +L E+ ++ +
Sbjct: 507 QIIVHNNQSPFTGAIVVPNREALRRELEARRTPEAERANVAAE----ILGAEIDRYRAGG 562
Query: 619 SFQ--------IGPIHVVDEPFT 633
++ + +VDE FT
Sbjct: 563 TYAGEFPERWLPAGLAIVDEAFT 585
>gi|298481594|ref|ZP_06999785.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|423214977|ref|ZP_17201505.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
gi|298272135|gb|EFI13705.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|392692240|gb|EIY85478.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
Length = 604
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 260/579 (44%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ +++ +I+ SV D ++ +DE + +G
Sbjct: 109 RFLFVGEQYQYDAAFSIFGFCTSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ + R E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEERT----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL--- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
+ EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 328 ------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A++ DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + I QI +I ++ A+IVP V A+ I + D EL
Sbjct: 474 KYVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
K I L+ R T + F QI ++ EPF++
Sbjct: 534 KHPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|336320550|ref|YP_004600518.1| AMP-dependent synthetase/ligase [[Cellvibrio] gilvus ATCC 13127]
gi|336104131|gb|AEI11950.1| AMP-dependent synthetase and ligase [[Cellvibrio] gilvus ATCC
13127]
Length = 605
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 152/533 (28%), Positives = 254/533 (47%), Gaps = 77/533 (14%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+L+ E++ A+GL GV+P +++ + S W + D A GAI V SS+E++
Sbjct: 52 ELDAEVVAVAKGLVARGVEPGDRVGIMSRTRYEWSLLDWATWAAGAIPVPLYETSSAEQV 111
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
I + S+ L VE+ E +R ++ +++E V +
Sbjct: 112 NWILSDSDVSVLVVESTAHAAVAQEARTGLTGLREVL------------VIDEGAV---E 156
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---- 230
++ G + D AR+ E +AT +YTSGTTG PKGV LTH N
Sbjct: 157 TLVSAGAD----VPDDEIARRRGLAELA---SVATVIYTSGTTGRPKGVELTHGNFYELT 209
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 289
++ + L ++V +E G + L +P HV+ R G L ++ R L DDL +
Sbjct: 210 VNAVEGLREVV-SEPGSRTLLFMPLAHVFARFIHVLCMPAGAVLGHSPDTRTLLDDLASF 268
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P ++++VP V+E +Y+G +++ ++ + + + + S Y+ R +
Sbjct: 269 RPTFILAVPRVFEKVYNGAEQK--AAAGGKGSIFQRAAKTSIVYS---RALD------TP 317
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHID 408
+ PS W R+ H +A+ LV ++++ + G +K +SGG L +
Sbjct: 318 RGPSP--------WLRL-------QHKVADVLVLHRLRALLGGQAKWAISGGAPLGERLG 362
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FY +G+KV GYGLTE++ RP +G+VG P+ T ++I D
Sbjct: 363 HFYRGVGLKVLEGYGLTETTAPATVNRPARTKIGTVGKPLPGTAVRIAD----------- 411
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G ++++G QV QGY N +AT++++ DGW TGD+G S G L + G
Sbjct: 412 DGEIEIKGIQVFQGYHNNDAATQESM-HDGWFRTGDLG----------SLDDEGYLRITG 460
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
R K+ IV + G+NV P LE+ LI Q+VV+G + GA++ D E V
Sbjct: 461 RKKEIIVTAGGKNVAPAVLEDRLRGHPLISQVVVVGDQRPFIGALVTLDPEGV 513
>gi|398822044|ref|ZP_10580434.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
gi|398227329|gb|EJN13561.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
Length = 606
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 247/505 (48%), Gaps = 64/505 (12%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P E++++ N + DQ L+ G + V + + + + +I S ++ L V+ E
Sbjct: 70 PGERVAILMPNGVAHIAMDQAALSRGLVPVPMHAVDNPDSIAYILADSGALLLFVDTLER 129
Query: 134 FNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDA 193
+ I T ++R I V D+ P + +D + + A
Sbjct: 130 WQAIIATGQPLDSLRRI---------VCADVTGPQPADTRIVALD------DWLASAPGA 174
Query: 194 RKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 253
+ +D+A VYTSGTTG PKGVML+H N++ ++++ + A D FLS L
Sbjct: 175 TAPLPDVAVEPNDLAAIVYTSGTTGRPKGVMLSHDNVVANVKAIAHRIEAAPDDVFLSFL 234
Query: 254 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 311
P H +ER GY+ + G + Y +V L +DL+ +P +ISVP +YE +++ I +
Sbjct: 235 PLSHTFERTGGYYYPIAAGACVAYARSVPLLSEDLKHVRPTVLISVPRIYERIHALIMQH 294
Query: 312 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 371
++A R + RAL+ ++ A + + +Q +A++D L
Sbjct: 295 --RATAGR--IERALLDLTIAVGGRR---------FDARQGRGTLAVVDRL--------A 333
Query: 372 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 430
WP L ++LV K+ + +G + VSGG + + + A+G+ + GYG+TE+SPV
Sbjct: 334 WP---LLKRLVADKVLAQLGGRLRVAVSGGAPIAEPVIRLFIALGLDILQGYGMTETSPV 390
Query: 431 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 490
++ P N SVGH ++ E+++ E +E+L VRG VM GY+ P T
Sbjct: 391 VSVNTPEDNDPRSVGHVLDGVEVRL--GENDELL---------VRGPSVMLGYWHKPEET 439
Query: 491 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 550
++ + DGWL+TGD ++R G + + GR KD +V STGE + P++LE A
Sbjct: 440 RRVKEADGWLHTGD-----------QARIDNGRITITGRIKDILVTSTGEKIAPVDLETA 488
Query: 551 ALRSSLIRQIVVIGQDQRRPGAIIV 575
L L Q +V+G+ + A++V
Sbjct: 489 ILADPLFEQALVVGEQRPFVTALVV 513
>gi|258625340|ref|ZP_05720239.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
gi|258582381|gb|EEW07231.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
Length = 601
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 263/570 (46%), Gaps = 79/570 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES-VALAVE 129
G+ ++K+++FS+N RW +AD L A+ V ++ E+ +I ++++ V E
Sbjct: 56 GIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGE 115
Query: 130 NPEFFNRIAE-TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFS 188
P+F +++ C + +R I+ + + D+ + +D+ F
Sbjct: 116 QPQFDAALSQFEHCPE--LRLIVAM-----NPNIDLKQASCAMHWDD-----------FV 157
Query: 189 DSNDARKHYKY----ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
N + H E DD+ T +YTSGTTG PKGVML ++N+ Q+ +
Sbjct: 158 AQNQTQDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLT 217
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 303
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE
Sbjct: 218 QDDVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEK 277
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
++S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 278 IFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL-------- 320
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 422
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LKQNHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE++ I+ C S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATISCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K T + DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKLEKETADSFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYI 472
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 600
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHS 532
Query: 601 ------EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 533 QVLEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|421352186|ref|ZP_15802551.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
gi|395952631|gb|EJH63245.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
Length = 601
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 272/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A ++ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKDLNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|444424568|ref|ZP_21220024.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444242274|gb|ELU53789.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 602
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 265/579 (45%), Gaps = 71/579 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I N V E P+F ++ C + + I+ + S D+ E S+ +
Sbjct: 103 IDNADVKVLFVGEQPQFDAAVSIYDECQQ--LELIVAM-----SDDIDLGEHAFAMSWQD 155
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G +S A + E DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 156 FIAKG-------DNSQHAELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLE 208
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYM 294
+ D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 209 GHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+VP YE ++S I +++ + R+++ + + A + EG ++PS
Sbjct: 269 SAVPRFYEKIFSAIHEKVSRAPVQRKIMFTWAVNMGAKMAACHQ--EG-------RKPSL 319
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEA 413
+ L + LA+KLV K+++ +G + GG L I F+ A
Sbjct: 320 M---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHA 364
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 365 IGINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL--------- 413
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG VM+GY+K P T++ DE G+L TGD G+I + G L + R K+
Sbjct: 414 VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKEL 463
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
+ S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I +
Sbjct: 464 MKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEQYAKELNIKYH 523
Query: 594 DASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
D EL K EK ++ L EL K+ F++ P
Sbjct: 524 DRVELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|299147218|ref|ZP_07040283.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
gi|298514496|gb|EFI38380.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
Length = 604
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 261/579 (45%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A A+ + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ ++++ +I+ SV D ++ +DE + G
Sbjct: 109 RFLFVGEQYQYDAAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMATGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVP 242
+D+ + R E DD+A +YTSGTTG PKGVML H L Q + D +
Sbjct: 165 --PHNDTVEERT----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTT 218
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D ++ LP HV+E+A Y +G+++ + +++ ++ +P M SVP +
Sbjct: 219 MSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFW 278
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +Y+G+Q++I ++ ++ + IR+ RI+ R K P + L
Sbjct: 279 EKVYAGVQEKINETTGLKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL--- 327
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQ 419
+ EK +Y ++ IGI + G ++P I+ F ++G+ +
Sbjct: 328 ------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMV 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG +
Sbjct: 376 VGYGLTESTATVSCTLPVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTI 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
+GY+K AT A++ DGW +TGD G+ G L L R KD S G
Sbjct: 425 TKGYYKKAEATAAAIEPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNG 473
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ V P LE + I QI +I ++ A+IVP V AK I + D +EL
Sbjct: 474 KYVAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELL 533
Query: 600 KEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
+ I L+ R T + F QI ++ EPF++
Sbjct: 534 QHPKIVGLF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|53711664|ref|YP_097656.1| long-chain-fatty-acid-CoA ligase [Bacteroides fragilis YCH46]
gi|60679909|ref|YP_210053.1| AMP binding long chain acyl-CoA synthetase [Bacteroides fragilis
NCTC 9343]
gi|265765048|ref|ZP_06093323.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336407849|ref|ZP_08588345.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|375356753|ref|YP_005109525.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|383116664|ref|ZP_09937412.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|423248321|ref|ZP_17229337.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|423253270|ref|ZP_17234201.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|423259296|ref|ZP_17240219.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|423263732|ref|ZP_17242735.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|423269687|ref|ZP_17248659.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|423272755|ref|ZP_17251702.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|423282376|ref|ZP_17261261.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
gi|52214529|dbj|BAD47122.1| putative long-chain-fatty-acid-CoA ligase [Bacteroides fragilis
YCH46]
gi|60491343|emb|CAH06091.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis NCTC 9343]
gi|251948055|gb|EES88337.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|263254432|gb|EEZ25866.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301161434|emb|CBW20974.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|335944928|gb|EGN06745.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|387776876|gb|EIK38976.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|392657170|gb|EIY50807.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|392660428|gb|EIY54042.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|392700533|gb|EIY93695.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|392706844|gb|EIY99965.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|392708319|gb|EIZ01426.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|404581944|gb|EKA86639.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
Length = 601
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 272/592 (45%), Gaps = 70/592 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + A + +GV+ EE + +FS N L D A A+ + + SS +
Sbjct: 39 NEFSQTVRQAANAMVELGVQEEENIGIFSQNKPECLFTDFAAFANRAVTIPLYATSSPAQ 98
Query: 114 LLHIYNHSESVALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+I N ++ L V E ++ + + ++ II +V D + ++
Sbjct: 99 AQYIINDAQIRFLFVGEQFQYDAAFSVFGFCPSLVQLIIF----DPAVVKDPRDMSSIY- 153
Query: 173 YDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
YDE + G++ + AR ++D+A +YTSGTTG PKGVML H L
Sbjct: 154 YDEFLAKGKDLPHNEVVEERTARA-------SAEDLANILYTSGTTGEPKGVMLHHSCYL 206
Query: 232 HQIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQR 288
R ++DI + DK +SM LP HV+E+A Y +G+++ + +++ ++
Sbjct: 207 EAFR-IHDIRLVDMTDKDVSMNFLPLTHVFEKAWTYLCVHKGVQVCINLRPADIQTTIKE 265
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P M SVP +E +Y+G+Q++I ++ ++++ I++ RI+ R
Sbjct: 266 IRPTLMCSVPRFWEKVYAGVQEKIAETTGIKKMLMLDAIKVG-------RIH-NLDYLRV 317
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMH 406
K P ++ L + EK +Y ++ IGI + G ++P
Sbjct: 318 GKTPPRMIQL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDE 362
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
I F ++G+ + VGYGLTES+ ++ T +GSVG + E+KI E NE+L
Sbjct: 363 ICEFVHSVGIDMLVGYGLTESTATVSCTSKTGYDIGSVGQVMPEVEVKI--GEDNEIL-- 418
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
+RG + +GY+K AT A+DE+GW +TGD G+ G L L
Sbjct: 419 -------LRGKTITKGYYKKAEATAAAIDEEGWFHTGDAGYFK-----------NGQLYL 460
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R KD S G+ + P LE + I QI +I ++ A+IVP V AK
Sbjct: 461 TERIKDLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKQYAK 520
Query: 587 RLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + D +EL + I+ L+ R T + F QI ++ EPF++
Sbjct: 521 EKGIEYKDMAELLEHPKITALF-RARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|407770692|ref|ZP_11118059.1| AMP-dependent synthetase/ligase [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407286266|gb|EKF11755.1| AMP-dependent synthetase/ligase [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 606
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 240/534 (44%), Gaps = 69/534 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A L IGV+P +++ L S+N W +AD ++ GA+ V + ++ + LH S
Sbjct: 55 LARSLYKIGVRPGDRVLLVSENRTEWSIADLAIMCVGALTVPAYTTNTERDHLHAIEDSG 114
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIVEEIPVFSYDEIIDLG 180
+ + + R I++ WG+ V +I + ++++I G
Sbjct: 115 AGIAIISTKKLAQPFLHAALDSGRCRHAIMMEDWGQS------FVGDITITRWEDMISQG 168
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
R +D DA I D +A +YTSGT G PKGVML+H +L +DI
Sbjct: 169 R----GLTDDIDAW----VANIERDQLACLIYTSGTGGAPKGVMLSHGAILSNCMGAFDI 220
Query: 241 VPAENGDK--FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMIS 296
+ ++ FLS LP H YE G YF S G ++ Y ++ L +L +P M +
Sbjct: 221 IETLGIEEEVFLSFLPLSHSYEHTAGLYFPMSIGAQIYYAESLDRLAANLAEVRPTIMTA 280
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP +YE LY + + + ++ + +++ ++ YE KQP L+
Sbjct: 281 VPRLYEMLYQRMSRMVEKEGGFKQKLFNLTLKLG------RKTYE--------KQPLSLI 326
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGV 416
I +C IL L K Q G KA VSGGG L + + + + G+
Sbjct: 327 EKIQ----NFVCEIL---------LRRKLRQRFGGRIKAMVSGGGPLNYELGVLFVSCGI 373
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
++ GYG TE +PV++ R N L +VG P+ E KI D G + +RG
Sbjct: 374 RILQGYGQTEFAPVVSCNRAENNKLRTVGPPMVGAEAKIAD-----------DGEILLRG 422
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
+M+GY+ P T + DGWL+TGDIG G LV+ R KD IV
Sbjct: 423 ESMMKGYWNLPEVTAATII-DGWLHTGDIGKFDEE----------GSLVITDRKKDIIVN 471
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
S G+N+ P +E + I Q +V G D+ A++ PD++ + AK I
Sbjct: 472 SGGDNISPQRIEGLLTLETEISQAMVYGDDKPYLVAVLWPDEDFMREFAKENGI 525
>gi|383457070|ref|YP_005371059.1| putative long-chain-fatty-acid--CoA ligase [Corallococcus
coralloides DSM 2259]
gi|380732726|gb|AFE08728.1| putative long-chain-fatty-acid--CoA ligase [Corallococcus
coralloides DSM 2259]
Length = 622
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 261/536 (48%), Gaps = 65/536 (12%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N R++ +++ ++++ + GL GV+P +++++F++ S WL+AD + A+
Sbjct: 40 KKNDRWQDVTYAQVLEDVMLMSAGLIAQGVQPGDRVAIFANTSLNWLIADLAISGAQAVT 99
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V + +++EE +I NHSE+ L V++ E + A+ + + +R + G+ S+
Sbjct: 100 VPIYASNTAEECRYILNHSETKLLLVDSDE---KDAKQIGRLSRVRARL---GEIPSLQK 153
Query: 163 DIVEEIPVFSYDEII--DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 220
+V E PV E+ D+ +R S +A + E + +D +YTSGTTG+P
Sbjct: 154 IVVFEGPVSGEKEMTLADMLASARGGPDASREAFERRVGE-VKLEDTNLLIYTSGTTGDP 212
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AV 279
KGV+LTH N ++ ++ + D + LP HV+ + S G L+ +V
Sbjct: 213 KGVILTHGNWAYEAKATQAMSLMVPNDSVMLFLPLAHVFAQVVKAAWLSMGFRLIIAESV 272
Query: 280 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
L +L +P + SVP V+E +Y+ + + ++A + R L R +F R
Sbjct: 273 DKLLVNLPETRPTVLPSVPRVFEKVYNNV---VANGTSAPGMKGR-LTRWAF------RQ 322
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--- 396
++ + R+Q + +A LA+KLV+ K++ + G
Sbjct: 323 FDEYVEARSQGREHNTLAFA-----------------LAKKLVFSKVRKVLDEKLGGNMR 365
Query: 397 --VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
+SGG L I F++ + KV GYGLTE+S R +G+VG P+ TEIK
Sbjct: 366 IFISGGAPLSRKIAYFFDMLDYKVLEGYGLTETSAPCNVNRVEKIKIGTVGPPMPGTEIK 425
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 514
I + G + VRG +M+GY+KNP+AT + L+ DGW +TGDIG + +
Sbjct: 426 I-----------AADGEIMVRGPCLMKGYYKNPAATAEVLEPDGWFHTGDIGELDSDN-- 472
Query: 515 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
L + R KD IV + G+NV P +E LI Q +V G +RP
Sbjct: 473 --------YLRITDRKKDIIVTAGGKNVAPQNIENTLKTFPLISQAMVYG--DKRP 518
>gi|342904876|ref|ZP_08726672.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
gi|341952332|gb|EGT78862.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
Length = 602
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 258/544 (47%), Gaps = 63/544 (11%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
IGV ++K+++F+ N RW + D L AI V + +++++ I NH++ L V
Sbjct: 56 IGV--QDKIAIFAHNMERWTIVDIATLQVRAITVPIYATNTAQQAEFILNHADVKILFVG 113
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYDEIIDLGRESRKAFS 188
+ E ++++ E ++ I+ + KS++ +++ P+ +++ I G +++
Sbjct: 114 DQEQYDQVLEIADHCPKLQKIVAM---KSTIQ---LQQDPLSCTWESFIKTGSNAQQ--- 164
Query: 189 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK 248
N+ + + + D+ T +YTSGTTG PKGVML + NL HQ+ + + + D
Sbjct: 165 --NELTQRLNQKQLS--DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDQDV 220
Query: 249 FLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSG 307
LS LP H++ERA +I RG L Y N ++ L +P M +VP YE +Y+
Sbjct: 221 SLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAA 280
Query: 308 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 367
+ ++ + R+++ I + + F L N K +L
Sbjct: 281 VLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKTVPFL------------ 319
Query: 368 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
L LA+KLV K++ +G K GG L I LF+ AIG+ +++GYG+TE
Sbjct: 320 ---LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTE 376
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
++ ++ S+G + E+KI E NE+L VRG VM+GY+K
Sbjct: 377 TTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKK 425
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
T QA EDG+L TGD G G L + R K+ + S G+ + P
Sbjct: 426 SEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQY 475
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 606
+E + I QI +I ++ A+IVP + + AK+L+I + D EL K I
Sbjct: 476 IESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILK 535
Query: 607 LYGE 610
++ +
Sbjct: 536 MFEQ 539
>gi|270295471|ref|ZP_06201672.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274718|gb|EFA20579.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 601
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 156/589 (26%), Positives = 265/589 (44%), Gaps = 66/589 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ Q + A + +G++P+E + +FS N L D G A A+ + + SS +
Sbjct: 40 EFSQTVRRTANAMVALGIEPQENIGIFSQNKPECLFTDFGAFANRAVTIPLYATSSPAQA 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N ++ L V ++ +++ +I+ +V D + ++ +D
Sbjct: 100 QYIINDAQIRYLFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVKDPRDMTSIY-FD 155
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E + + E + ++A + DD+A +YTSGTTG PKGVML H N
Sbjct: 156 EFMAMDEELQ------HNAIVEERTAAASDDDLANILYTSGTTGEPKGVMLHHFNYREAF 209
Query: 235 RSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQP 291
R ++DI D+ +SM LP HV+E+A Y RG+++ + ++++ ++ +P
Sbjct: 210 R-IHDIRLPFMTDRDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRP 268
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M SVP +E +Y+G+Q++I + R+ + I++ + R K
Sbjct: 269 TLMCSVPRFWEKVYAGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKT 320
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDL 409
P ++ L + EK +Y ++ IGI + G ++P I
Sbjct: 321 PPMMLHL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICE 365
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 366 FVHSVGINMVVGYGLTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL----- 418
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
+RG + GY+K P AT A+D +GW +TGD G++ H L L R
Sbjct: 419 ----LRGKTITTGYYKKPEATAAAIDRNGWFHTGDAGYLKDSH-----------LYLTER 463
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD S G+ + P LE I QI VI +++ A+IVP V AK
Sbjct: 464 IKDLFKTSNGKYISPQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKG 523
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + + EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 524 IAYNNMDELLQHSKIQALF-RARIDTLQQQFAHYEQVKRFTLLTEPFSM 571
>gi|160899186|ref|YP_001564768.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160364770|gb|ABX36383.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 647
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 217/442 (49%), Gaps = 54/442 (12%)
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
++D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 209 AEDLAAVVYTSGTTGKPKGVMLTHRNVVSNVQAVMQRLQPRSDDVFLSFLPLSHTFERTA 268
Query: 264 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 321
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + + +
Sbjct: 269 GYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERVHAKVMETL--------- 319
Query: 322 VARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALIDWLWARIICAILWPL--H 375
ARA ++ A R ++ FC T+ Q + + WL WP+ H
Sbjct: 320 -ARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQWL--------PWPVLNH 370
Query: 376 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 435
L+A+ L+ + G + VSGG L I + +G+ + GYG+TE+SPV+ A
Sbjct: 371 LVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPLIQGYGMTETSPVVCANT 426
Query: 436 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 495
N +VGH + E++I G ++VRG VM+GY++ P T +
Sbjct: 427 LEDNHPATVGHALPGVEVRI-----------GENRELQVRGPCVMRGYWERPEDTAKTFT 475
Query: 496 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 555
+DGWL TGD I GR R ++GR K+ IV STGE + P +LE A
Sbjct: 476 DDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTSTGEKIPPADLELAITGDP 524
Query: 556 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 615
Q+ V+G+D+ A+ V ++ E A+RL + D L+ + K
Sbjct: 525 FFTQVFVVGEDRPFIAAVAVIERGEWQTMARRLGLDPEDPKSLNHSAAEREALARIEKQV 584
Query: 616 SKCSFQIGP--IHVVDEPFTVN 635
+ + P +H+ EP+T+
Sbjct: 585 ASFARYAVPRAVHLELEPWTIE 606
>gi|262192691|ref|ZP_06050831.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
gi|262031430|gb|EEY50028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
Length = 601
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 271/592 (45%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A D+ + +Y D+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYH-------DLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|255014105|ref|ZP_05286231.1| long-chain-fatty-acid-CoA ligase, putative [Bacteroides sp. 2_1_7]
gi|410101665|ref|ZP_11296593.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
gi|409239463|gb|EKN32247.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
Length = 633
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 155/588 (26%), Positives = 276/588 (46%), Gaps = 68/588 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ RF SK+ + + GL +GV+ + ++L S+ W++ + M GA N
Sbjct: 26 KTGKRFEPTTYSKVRDLVYEEGAGLVSLGVRKGDNMALLSEGRNAWIIGELAMFYAGATN 85
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I A+R II+L +
Sbjct: 86 VPLSIKLEEANDLLFRLVHADVKYIMVSGQQ-LKKIRAIKDKLPAVRKIIVLDEQAEYQD 144
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
++ S EI +G K + + + +++G+DD AT YTSGTT +P
Sbjct: 145 REM-------SLSEIRRMG----KVYLGIHPLEEFLAIGQSLGNDDYATITYTSGTTADP 193
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IEL 274
KGV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 KGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATVQV 253
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ +++ ++P+ ++SVP + + I++ I + +RI +
Sbjct: 254 GRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQGIRARGKNAARLFNLALRIGY 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y EG + +L PL L +KL++ K++ G
Sbjct: 314 IYNGDSDEEEG----------------------KGFRVLLKPLVRLFDKLLFAKVRENFG 351
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K + GG L + FY A+G+ + GYGL+E++P+I+ P + GS G +
Sbjct: 352 GELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATPIISTNGPRRHTFGSSGVLVRP 411
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D + N VLP G KG + +RG VM GY+KNP++T + E GWL TGD+G++
Sbjct: 412 LDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPASTADTVKE-GWLYTGDMGYMR- 468
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRR 569
G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 469 ----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPY 518
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTISLLYGELRKW 614
A++VP+KE + R + H + S+ +E+ I ++ ++ ++
Sbjct: 519 TTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIRIIQRQIDRF 561
>gi|432089699|gb|ELK23519.1| Long-chain-fatty-acid--CoA ligase 1 [Myotis davidii]
Length = 706
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 239/522 (45%), Gaps = 69/522 (13%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQYIGIFAQNRPEWVIIEQGCFAFSMVVVPLYDTLGTEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
N + E + +K ++ ++L+ S D+VE + + S + DLGR +RK
Sbjct: 206 ANMLLEGVENKLTPGLKVVVLM----DSYGSDLVERGKKCGVEITSMKAMEDLGRANRK- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ ++ +IV
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNIVSDASGFVKVTENIVS 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP
Sbjct: 310 PTPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQP--------- 360
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRI-SFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
T++ + + R RI A T KR F R + + +
Sbjct: 361 --TIFP-VPEAXXXXXXXXXXXXRMFDRIFGQANTTLKRWLLDFASKRKEAELRSCIIRN 417
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE-AIGVKV 418
+ LW +KL+++KIQ A G++ V+G + + F A+G +
Sbjct: 418 NSLW---------------DKLIFRKIQVADGLTVIXVTGAAPVSATVLTFLRAALGCQF 462
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + + P G VG P+ IK+VD E L A +G V V+G
Sbjct: 463 YEGYGQTECTAGCSLTIPGDWTAGHVGAPMPCNLIKLVDVEEMNYLAAKGEGEVCVKGPN 522
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 523 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GALKIIDRKKHIFKLAQ 572
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKE 579
GE + P ++E LRS + Q+ V G+ Q A++VPD E
Sbjct: 573 GEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLVAVVVPDVE 614
>gi|269956645|ref|YP_003326434.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305326|gb|ACZ30876.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 622
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 250/541 (46%), Gaps = 68/541 (12%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
R+ ++ ++ + +++ A+GL +GV+P + + S W + D + A G + V
Sbjct: 52 RDGGWQKVTVAEFDAQVVAVAKGLVALGVEPGTTVGIMSRTRYEWTLLDFAVWAAGGVPV 111
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
SS E++ I ++S + VEN + E R ++++ S D
Sbjct: 112 PIYETSSVEQVEWILSNSAIRVVVVENDANAATV-EAAGLAGPEREVLVIDPATGSGRRD 170
Query: 164 IVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 223
E V ++ D E R+ + G+DD+AT +YTSGTTG PKG
Sbjct: 171 GAIESLVAGGADVADAEIERRRRLA--------------GADDLATIIYTSGTTGRPKGA 216
Query: 224 MLTHKNLLH-QIRSLYDIVPAENG-DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VR 280
LTH N + ++ ++ NG + + LP HV+ R + G L ++ ++
Sbjct: 217 ELTHGNFTTLALNTVAEVPEVFNGMGRTIIFLPLAHVFARFVEVVAVAGGSVLGHSPDIK 276
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRI 339
NL DL ++P Y++ VP ++E +Y+ ++ SSAA + AR + A A+ R
Sbjct: 277 NLTKDLAAFRPTYLLGVPRIFEKVYNTAEQ----SSAAEK--ARGYFNWATAVAIAYSRA 330
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 398
+ ++ PS LW + L A+ LVY K++ +G K VS
Sbjct: 331 LD------TERGPS--------LWLKF-------QRLFADGLVYSKLRDKLGGRVKFAVS 369
Query: 399 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
GGG L + FY IG+ + GYGLTE++ + RP +GSVG + + I D
Sbjct: 370 GGGPLGERLGHFYRGIGLHIIEGYGLTETTAPTSVNRPGATRVGSVGQMLPGCSVSIAD- 428
Query: 459 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 518
G + ++G + +GY +NP AT A DEDGW TGD+G +
Sbjct: 429 ----------DGEILLKGPHLFRGYHRNPEATAAAFDEDGWFRTGDLGKVDDE------- 471
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
G + + GR K+ IV + G+NV P LE+ +L+ Q VV+G ++ GA++ D
Sbjct: 472 ---GFVHITGRKKEIIVTAGGKNVAPAVLEDRVRAHALVSQCVVVGDNRPFIGALVTLDA 528
Query: 579 E 579
E
Sbjct: 529 E 529
>gi|417850883|ref|ZP_12496700.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338220259|gb|EGP05803.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 606
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 266/561 (47%), Gaps = 62/561 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +Q++ F+ L + ++K+++F+ N RW +AD G + A+ V + S+++++
Sbjct: 40 QFQQDLDTFSYALLANHIGVQDKIAIFAHNMPRWTIADIGTMQVRAVVVPIYATSAAKQV 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N+++ L V + E +N E + + ++ I+ + K ++ D+ +
Sbjct: 100 EYILNNADVKILFVGDQEEYNCTLEIIDACPQIQKIVTM---KDNL--DLKNHPKACDWQ 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ G ++ +K D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 155 TFLLEGSPLQQTVLQERLEQKQLT-------DLFTLIYTSGTTGEPKGVMLDYANLAHQL 207
Query: 235 RS---LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 290
++ + + D LS LP H++ERA ++ RG Y N +++ L +
Sbjct: 208 KAHDEAFTTLNVSQYDSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIR 267
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE +Y+ + ++ + RR++ ++A ++ ++ +QK
Sbjct: 268 PTLMCAVPRFYEKIYTAVWDKVQKAPLFRRMI------FNWAIVVGQKCFQFI----SQK 317
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P I +L + LA+KLV K++ +G + GG L +I L
Sbjct: 318 KP--------------IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGL 363
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ +IG+ V++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 364 FFHSIGINVKLGYGMTETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL----- 416
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T + EDG+L TGD G P G L + R
Sbjct: 417 ----VRGGMVMRGYYKKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDR 462
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E + I QI VI ++ A+IVP + AK+L+
Sbjct: 463 IKELMKTSNGKYIAPQYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLN 522
Query: 590 IVHADASELSKEKTISLLYGE 610
I + D EL K I ++ +
Sbjct: 523 IKYHDRLELIKHSDILQMFEQ 543
>gi|407984058|ref|ZP_11164689.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium hassiacum
DSM 44199]
gi|407374332|gb|EKF23317.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium hassiacum
DSM 44199]
Length = 600
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 244/538 (45%), Gaps = 77/538 (14%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V C+ EQ I A GL GV+P ++++L S W + D +LA GA+ V S
Sbjct: 46 VTCKEAAEQ-IRAAALGLIAEGVQPGDRVALLSATRYEWPIIDFAILAIGALTVPIYETS 104
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
S E++ + +SE+V + E E +R+ + + +R + + G +
Sbjct: 105 SVEQIRFVLENSEAVLIFAETDEHADRVEQIAGALPKLRKVFRIAGSGTP---------- 154
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
+ + + + GR + D + I S D AT +YTSGTTG PKG LTH N
Sbjct: 155 --ALEALAEAGRSVDPSELDK-------RLAAIRSSDPATLIYTSGTTGRPKGCQLTHSN 205
Query: 230 LLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 286
L++++R P G+K L LP HV RA F + L +T+ ++NL
Sbjct: 206 LVYEVRGAKACFPDLLGKGEKMLVFLPLAHVLARAITMAAFVNKVTLGFTSDIKNLVPLF 265
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR--RVVARALIRISFAYTAFKRIYEGFC 344
++P ++SVP V+E +Y+ ++ R + AR I S A
Sbjct: 266 AVFKPTLVVSVPRVFEKVYNTAEQNAENDGKGRIFAIAARTAIDYSRAL----------- 314
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 403
+ P L+ L H L +KLVY K+++A+G A +SGG L
Sbjct: 315 ---DSGGPGLLLRL---------------RHALFDKLVYGKLRNALGGECHAAISGGAPL 356
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+ FY +G+ + GYGLTE+S I R +G+VG + +++ +E NE+
Sbjct: 357 GERLGHFYRGVGLTIYEGYGLTETSAAITVNRIDDLKVGTVGKLLPGNSMRL--SEDNEL 414
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
L VRG V GY++N + T+ A DGW +TGD+G I G
Sbjct: 415 L---------VRGGVVFNGYWRNEAETQAAF-TDGWFHTGDLGSIDDD----------GF 454
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
L + GR K+ IV + G+NV P LE+ LI Q + +G + A++ D E +
Sbjct: 455 LKIIGRKKEIIVTAGGKNVAPAILEDQLRAHPLISQAMAVGDGKPFIAALVTIDPEAI 512
>gi|378773920|ref|YP_005176163.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
gi|356596468|gb|AET15194.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
Length = 606
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 154/561 (27%), Positives = 267/561 (47%), Gaps = 62/561 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +Q++ F+ L + ++K+++F+ N RW +AD G + A+ V + S+++++
Sbjct: 40 QFQQDLDTFSYALLANHIGVQDKIAIFAHNMPRWTIADIGTMQVRAVVVPIYATSAAKQV 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N+++ L V + E +N E + + ++ I+ + K ++ D+ +
Sbjct: 100 EYILNNADVKILFVGDQEEYNCTLEIIDACPQIQKIVAM---KDNL--DLKNHPKACDWQ 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ G ++ + AR K T D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 155 TFLLEGSPLQQT---ALQARLEQKQLT----DLFTLIYTSGTTGEPKGVMLDYANLAHQL 207
Query: 235 RS---LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 290
++ + + D LS LP H++ERA ++ RG Y N +++ L +
Sbjct: 208 KAHDEAFTTLNVSQYDSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIR 267
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE +Y+ + ++ + RR++ I + F+ I +QK
Sbjct: 268 PTLMCAVPRFYEKIYTAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SQK 317
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P I +L + LA+KLV K++ +G + GG L +I L
Sbjct: 318 KP--------------IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGL 363
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ +IG+ V++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 364 FFHSIGINVKLGYGMTETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL----- 416
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T + EDG+L TGD G P G L + R
Sbjct: 417 ----VRGGMVMRGYYKKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDR 462
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E + I QI VI ++ A+IVP + AK+L+
Sbjct: 463 IKELMKTSNGKYIAPQYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLN 522
Query: 590 IVHADASELSKEKTISLLYGE 610
I + D EL K I ++ +
Sbjct: 523 IKYHDRLELIKHSDILQMFEQ 543
>gi|153834232|ref|ZP_01986899.1| AMP-binding family protein [Vibrio harveyi HY01]
gi|148869420|gb|EDL68426.1| AMP-binding family protein [Vibrio harveyi HY01]
Length = 602
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 265/579 (45%), Gaps = 71/579 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I N V E P+F ++ C + + I+ + S D+ E S+ +
Sbjct: 103 IDNADVKVLFVGEQPQFDAAVSIYDECQQ--LELIVAM-----SDDIDLGEHAFAMSWQD 155
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G +S A + E DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 156 FIAKG-------DNSQHAELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLE 208
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYM 294
+ D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 209 GHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+VP YE ++S I +++ + R+++ + + A + EG ++PS
Sbjct: 269 SAVPRFYEKIFSAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSL 319
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEA 413
+ L + LA+KLV K+++ +G + GG L I F+ A
Sbjct: 320 M---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHA 364
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 365 IGINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL--------- 413
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG VM+GY+K P T++ DE G+L TGD G+I + G L + R K+
Sbjct: 414 VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKEL 463
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
+ S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I +
Sbjct: 464 MKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYH 523
Query: 594 DASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
D EL K EK ++ L EL K+ F++ P
Sbjct: 524 DRVELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|86148106|ref|ZP_01066406.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
gi|85834093|gb|EAQ52251.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
Length = 602
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 265/578 (45%), Gaps = 84/578 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLHIYNHS 121
A+GLRV ++K+ +FS+N +W VAD L + V + + ++++ I N
Sbjct: 53 LAQGLRV-----QDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNTAAQSSYIIQNAD 107
Query: 122 ESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
+ E +F ++ E L AM I L G + +V S+ E
Sbjct: 108 VKILFVGEQAQFDAAVSLFEECEQLEVVVAMSDDIDLQGHRFAV-----------SWKEF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
+ G E ++A D + DD+ T +YTSGTTG PKGVML + N+ +Q++
Sbjct: 157 MARGVEDQQAELD-------VRLADACMDDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 210 HDERLSLSKDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVKPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+V+ + + + + EG + PS++
Sbjct: 270 AVPRFYEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------RTPSFM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAI 414
L H LA+KLV K+++ +G + + GG L I F+ AI
Sbjct: 321 ---------------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + E+KI G+K + V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAKDEILV 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T + DE G+L TGD G + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + + AK L+I + D
Sbjct: 465 KTSGGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEVYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 525 RVELVKNHQIVEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|423304813|ref|ZP_17282812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
gi|423310073|ref|ZP_17288057.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392682713|gb|EIY76055.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392683477|gb|EIY76812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
Length = 601
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 156/589 (26%), Positives = 265/589 (44%), Gaps = 66/589 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ Q + A + +G++P+E + +FS N L D G A A+ + + SS +
Sbjct: 40 EFSQTVRRTANAMVALGIEPQENIGIFSQNKPECLFTDFGAFANRAVTIPLYATSSPAQA 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N ++ L V ++ +++ +I+ +V D + ++ +D
Sbjct: 100 QYIINDAQIRYLFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVKDPRDMTSIY-FD 155
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
E + + E + ++A + DD+A +YTSGTTG PKGVML H N
Sbjct: 156 EFMAMDEELQ------HNAIVEERTAAASDDDLANILYTSGTTGEPKGVMLHHFNYREAF 209
Query: 235 RSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQP 291
R ++DI D+ +SM LP HV+E+A Y RG+++ + ++++ ++ +P
Sbjct: 210 R-IHDIRLPFMTDQDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPQDIQTTIKEIRP 268
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M SVP +E +Y+G+Q++I + R+ + I++ + R K
Sbjct: 269 TLMCSVPRFWEKVYAGVQEKISQETGLRKAMMLDAIKVGRTH--------NIDYLRQGKT 320
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDL 409
P ++ L + EK +Y ++ IGI + G ++P I
Sbjct: 321 PPMMLHL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICE 365
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 366 FVHSVGINMVVGYGLTESTATVSCFLNEGYEIGSVGTVMPDVEVKI--GENNEIL----- 418
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
+RG + GY+K P AT A+D +GW +TGD G++ H L L R
Sbjct: 419 ----LRGKTITTGYYKKPEATAAAIDRNGWFHTGDAGYLKDSH-----------LYLTER 463
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD S G+ + P LE I QI VI +++ A+IVP V AK
Sbjct: 464 IKDLFKTSNGKYISPQALETKLAIDRYIDQIAVIADERKFVSALIVPVYGFVKDYAKEKG 523
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + + EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 524 IAYNNMDELLQHSKIQALF-RARIDTLQQQFAHYEQVKRFTLLTEPFSM 571
>gi|406576196|ref|ZP_11051861.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
gi|404554395|gb|EKA59932.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
Length = 579
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 240/521 (46%), Gaps = 77/521 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL GV+ ++++L +D WL+ D+ + A GA V SS+ +L I S +
Sbjct: 60 ARGLVASGVEAGDRVALMADTRYEWLLLDEAVWAVGAGTVPVYPSSSAGQLEWILRDSGA 119
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V + AET + D+ E+ V D + LG
Sbjct: 120 RLLLVGTADQ----AET----------------ARGLGLDV--EVLVIDEDALEVLGERG 157
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD---I 240
R+ +AR + + + DD+A VYTSGTTG PKGV+LTH++L ++ D
Sbjct: 158 RQV----PEARVIERRDAVTLDDLAGIVYTSGTTGRPKGVVLTHRHLAAEVAGCLDHPIG 213
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPL 299
G + L LP HV R+ Y G + + A ++ D L ++PH ++ VP
Sbjct: 214 SVGRPGRRILIFLPMAHVLARSVAYIAAQSGATVGFWADFGSIVDKLGSFRPHMVVGVPR 273
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
V+E ++ G++ Q ++ +RV A + A R + + +PS + L
Sbjct: 274 VFEKVHDGVRSQ----ASGQRVSAVVFTKGEQVALACSR-----AIGEGEGRPSLPLRLA 324
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKV 418
H + ++L+Y K+++A+G V SGGG+L + F+ +GV V
Sbjct: 325 ---------------HAVFDRLLYTKVRAALGGEMEYVISGGGALGERLGHFFRGVGVPV 369
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYGLTE+ I P +G+VG P+ E+++ D G + VRG+
Sbjct: 370 HEGYGLTETCAAITVNGPGVQRVGTVGRPLPGNEVRVAD-----------DGAISVRGAV 418
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V GY+ N AT++A+ DGW TGD+G + G L + GRAK+ IV +
Sbjct: 419 VTDGYWGNDEATREAI-VDGWFATGDLGTLDDD----------GYLTITGRAKEIIVTAG 467
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G+NV P LE+ L+ Q +V+G + GA+I D E
Sbjct: 468 GKNVSPGPLEDVLRTHPLVSQAMVVGDGRPFVGALITLDPE 508
>gi|403251222|ref|ZP_10917573.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
gi|402915430|gb|EJX36402.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
Length = 594
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 255/557 (45%), Gaps = 85/557 (15%)
Query: 57 EQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLH 116
E+EI A+GL GV +++++ + W V D + GA+ V SS+E++
Sbjct: 52 EEEIKAVAKGLVANGVSFGDRVAIMAKTRYEWTVLDFAIWYAGAVPVPIYETSSAEQVEW 111
Query: 117 IYNHSESVALAVENP---EFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
I S +V + VE P E + + C K +W +Y
Sbjct: 112 ILTDSSAVGIIVETPALAELVQPVLPSSCKK--------VWN---------------ITY 148
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ + L E + D R+ E + + +AT +YTSGTTG PKGV LTH N L +
Sbjct: 149 NALATLTHEGKDVSEDEIAKRR----EKLKPETLATLIYTSGTTGKPKGVQLTHGNFLSE 204
Query: 234 ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQR 288
+ D+ G L LP HV+ R + G+ L + + + L DL
Sbjct: 205 CGNVVNGASDLFLKPGGSTLL-FLPVAHVFGRMVQIGSITAGLHLAHCSDLTKLPSDLAS 263
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
++P ++++VP ++E +++G + + +A + + ++ AY+ + +
Sbjct: 264 FKPTFVLAVPRIFEKIFNGAEAK--AQAAGKGKIFHKAAEVAIAYSK----------SLD 311
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
K+ S L+ L H L +KLVY KI++ +G +A +SGG L +
Sbjct: 312 SKKISPLLKL---------------QHGLFDKLVYTKIRTGLGGRVEAAISGGAPLGERL 356
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
FY G++V GYGLTE++ + + +GSVG PI T IKI AE EVL
Sbjct: 357 GHFYRGAGIRVLEGYGLTETTAGATLNLTSAHRVGSVGKPIPGTTIKI--AEDGEVL--- 411
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
++G VMQGY++N +A K+ DG+ +GD+G I G L +
Sbjct: 412 ------IKGPIVMQGYWQNDAANKEVFTSDGYFKSGDLGKIDEE----------GYLSIV 455
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
GR K+ IV + G+NV P LE+ LI Q +V+G ++ A+I D + + A
Sbjct: 456 GRKKELIVTAGGKNVAPAVLEDRLRSHPLISQCMVVGDNKPFIAALITIDPDAIKPWAVA 515
Query: 588 LSIVHADASELSKEKTI 604
A ++L+K+ T+
Sbjct: 516 NKKEGASIADLAKDPTL 532
>gi|422336959|ref|ZP_16417931.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
gi|353345511|gb|EHB89802.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
Length = 595
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 152/581 (26%), Positives = 268/581 (46%), Gaps = 67/581 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L+Q+I + L + ++K+ +F+ N RW + D G L A+ V + +++++
Sbjct: 38 AELQQQIDQISLALLANHIDIQDKIGIFAHNMPRWTITDIGTLQIRAVTVPIYATNTAKQ 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
I N+++ + V + E ++++ + ++ I+ + K+++ + E +
Sbjct: 98 AQFIINNADMKIIFVGDQEQYDQVIDIAEECPTLQKIVAM---KNTI--HLHEHAKACHW 152
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
E ID+ E + + ++ +D+ T +YTSGTTG PKGVML + NL HQ
Sbjct: 153 QEFIDMADEQYQV-------ELQQRLDSKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQ 205
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPH 292
+++ + ++ D LS LP H++ERA ++ RG Y N ++ L +P
Sbjct: 206 LKAHDQALKVDDSDVSLSFLPLSHIFERAWVAYVLHRGAANCYIEDTNQVRSALTEIRPT 265
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE +Y+ I ++ + R+ + + I + L + QK
Sbjct: 266 LMCAVPRFYEKIYTAILDKVHNAPKLRQWIFHWAMAIGHQHFD--------ALAKGQK-- 315
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
I +L + LA KLV K+++ +G + GG L I LF+
Sbjct: 316 --------------IGFLLKQQYSLANKLVLGKLRALLGGRIRMMPCGGAKLEPTIGLFF 361
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+IG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 362 HSIGLNIKLGYGMTETTATVSCWDDVNFNANSIGSLMPGAEVKI--GENNEIL------- 412
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG VM+GY+K P T +A DG+L TGD G + + L + R K
Sbjct: 413 --VRGGMVMKGYYKKPQETAEAFTADGFLKTGDAGEFDANSN----------LYITDRIK 460
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ + S G+ + P LE + I QI VI ++ A+IVP + AK+++I
Sbjct: 461 ELMKTSNGKYIAPQVLESKIGKDKFIEQIAVIADAKKYVSALIVPCYTALEEYAKQVNIK 520
Query: 592 HADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ D EL K E+ I+ L EL W F + P
Sbjct: 521 YQDRLELLKNSEIIQMLERRINDLQKELAGWEQIKRFTLLP 561
>gi|334337306|ref|YP_004542458.1| long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
gi|334107674|gb|AEG44564.1| Long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
Length = 604
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 248/555 (44%), Gaps = 74/555 (13%)
Query: 29 RNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
R D AT I + + + + E++ A+GL GV+P + + + S W
Sbjct: 25 RVAKDPAATIIERTDGAGGWTPLTGAAFDAEVVAVAKGLVAKGVEPGDAVGIMSKTRYEW 84
Query: 89 LVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMR 148
+ D A GA+ V SS+E++ I ++ L VE P+ +AE A+R
Sbjct: 85 TLLDFAAWAAGAVPVPIYETSSAEQVQWILTDADVRLLVVETPDHAATVAEVSDDAPALR 144
Query: 149 FIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIA 208
++ I D ++ G +D D + DD+A
Sbjct: 145 EVLT---------------IDQGGIDALVAAG-------ADVPDDEIARRRALANLDDLA 182
Query: 209 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYF 266
T +YTSGTTG PKG LTH N + + VP G + L LP HV+ R
Sbjct: 183 TIIYTSGTTGRPKGAELTHGNFASLAVNAVEAVPTVFTEGGRTLLFLPLAHVFARFVEVL 242
Query: 267 IFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 325
+ G L + ++ + L+ ++P Y+++VP V+E +Y+ SA ++ A
Sbjct: 243 AIAAGTVLGHWGDLKTVTAGLESFRPTYILAVPRVFEKVYN---------SAEQKAAAGG 293
Query: 326 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 385
++I F + A I L K PS LW + H +A+KLVY K
Sbjct: 294 KLKI-FHWAAATAIEWSRALD-TPKGPS--------LWLNV-------QHKVADKLVYSK 336
Query: 386 IQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 444
+++ +G ++ VSGGG L + F+ +G+ V GYGLTES+ + RP +G+V
Sbjct: 337 LRAVLGGQARHAVSGGGPLGERLGHFFRGLGLTVLEGYGLTESTAPTSVNRPDATKIGTV 396
Query: 445 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 504
G + +K+ A E+L +RG + +GY NP AT +A D + W TGD
Sbjct: 397 GTQLPGCGVKL--APDGEIL---------LRGIHIFRGYHNNPEATAEAFDGE-WFRTGD 444
Query: 505 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 564
+G + G L + GR K+ IV + G+NV P LE+ +L+ Q VV+G
Sbjct: 445 LGTLDDD----------GFLTITGRKKEIIVTAAGKNVAPAVLEDRIRAHALVSQCVVVG 494
Query: 565 QDQRRPGAIIVPDKE 579
++ GA++ D E
Sbjct: 495 DNRPFIGALVTLDAE 509
>gi|254492052|ref|ZP_05105229.1| AMP-binding enzyme, putative [Methylophaga thiooxidans DMS010]
gi|224462749|gb|EEF79021.1| AMP-binding enzyme, putative [Methylophaga thiooxydans DMS010]
Length = 599
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 259/564 (45%), Gaps = 78/564 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q++ + L+ ++P ++++L N+ W+ DQ + G I V + + +I
Sbjct: 54 QQVARWQAALKHENLEPGDRVALNLRNTKEWVFFDQAAMGLGLIVVPLYPDDRPDNVAYI 113
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
++ L ++N + R+ ++ + +R +I+ S++ +P + +
Sbjct: 114 LQDADVKLLYLQNHAQWKRLQPSITDEHNLRRVIIANQDSESLS------LPAIYAQDWL 167
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-- 235
ES + DA + +A+ +YTSGTTG PKGVML+H N+L
Sbjct: 168 PTSGESITDY----DADPY---------QLASIIYTSGTTGRPKGVMLSHHNMLSVAAGS 214
Query: 236 -SLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPH 292
++I P D FLS LP H ER GY++ G + Y+ + L DD+Q +P
Sbjct: 215 LQYFEIFP---NDLFLSFLPLSHTLERTAGYYLPIMAGASVAYSRGIPQLADDMQMVKPT 271
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--SFAYTAFKRIYEGFCLTRNQK 350
+I+VP ++E +YS +Q Q+ + V++R L ++ S ++ FK + +
Sbjct: 272 ILIAVPRIFERIYSRLQAQL----DQKPVISRFLFQLTCSTGWSKFK-----YQQGKQGW 322
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P + L L K+V +K+ +G + VSGG LP
Sbjct: 323 RPGF------------------SLLPLLNKIVAQKVHQRMGGQVRLAVSGGAPLPFQAAK 364
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
+ +G+ + GYGLTE+SPVI+ P N SVG I +KI D +E+L
Sbjct: 365 LFIGLGLNLLQGYGLTETSPVISVNEPANNDPTSVGRAIPGVAVKIGD--NDELL----- 417
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG M GY+ N AT QA++ +GWL+TGD I + + + GR
Sbjct: 418 ----VRGPGNMMGYWNNHKATAQAINAEGWLHTGDQAKIDDNDH----------IHITGR 463
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD +VLS GE V P ++E A Q +++G+ + A+IV + ++ AK L
Sbjct: 464 IKDILVLSNGEKVPPSDMESAIQSGEYFEQALIVGEGESYLSALIVLNTDKWFSLAKELG 523
Query: 590 IVHADASELSKEKTISLLYGELRK 613
+ D S L + + +LR+
Sbjct: 524 LDAMDNSSLESKNLHQFVIQKLRQ 547
>gi|423281106|ref|ZP_17260017.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
gi|404583270|gb|EKA87951.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
Length = 601
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 269/590 (45%), Gaps = 66/590 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + A + +GV+ EE + +FS N L D A A+ + + SS +
Sbjct: 39 NEFSQTVRQAANAMVELGVQEEENIGIFSQNKPECLFTDFAAFANRAVTIPLYATSSPAQ 98
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ L V ++ ++ +I+ +V D + ++ +
Sbjct: 99 AQYIINDAQIRFLFVGEQFQYDAAFSVFGFCPSLTQLIIF---DPAVVRDPRDMSSIY-F 154
Query: 174 DEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
DE + G++ + AR G+DD+A +YTSGTTG PKGVML H L
Sbjct: 155 DEFLAKGKDLPHNEVVEERTARA-------GADDLANILYTSGTTGEPKGVMLHHSCYLE 207
Query: 233 QIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRY 289
R ++DI + DK +SM LP HV+E+A Y +G+++ + +++ ++
Sbjct: 208 AFR-IHDIRLVDMTDKDVSMNFLPLTHVFEKAWTYLCVHKGVQVCINLRPADIQTTIKEI 266
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M SVP +E +Y+G+Q++I ++ ++++ I++ RI+ L R
Sbjct: 267 RPTLMCSVPRFWEKVYAGVQEKIAETTGIKKMLMLDAIKVG-------RIHNLEYL-RVG 318
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHI 407
K P ++ L + EK +Y ++ IGI + G ++P I
Sbjct: 319 KTPPKMIQL---------------KYKFYEKTIYALLKKTIGIENGNFFPTAGAAVPDEI 363
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
F ++G+ + VGYGLTES+ ++ T +GSVG + E+KI E NE+L
Sbjct: 364 CEFVHSVGIDMLVGYGLTESTATVSCTSKTGYDIGSVGQVMPEVEVKI--GEDNEIL--- 418
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
+RG + +GY+K AT A+DE+GW +TGD G+ G L L
Sbjct: 419 ------LRGKTITKGYYKKAEATAAAIDEEGWFHTGDAGYFK-----------NGQLYLT 461
Query: 528 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 587
R KD S G+ + P LE + I QI +I ++ A+IVP V AK
Sbjct: 462 ERIKDLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKQYAKE 521
Query: 588 LSIVHAD-ASELSKEKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
I + D A L K I+L + + + QI ++ EPF++
Sbjct: 522 KGIEYKDMAGLLEHPKIIALFRARIDTLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|326797469|ref|YP_004315288.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326548233|gb|ADZ76618.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 597
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 255/555 (45%), Gaps = 80/555 (14%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q + + ++GL +G+K +KL++ S N W D + GA V S +L +I
Sbjct: 41 QIVDNLSKGLLNLGIKKGDKLAIMSANRPEWNFTDFAINQIGAAVVPLYPTLSDHDLNYI 100
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
++E V + ++ K A+ L +IP++++D++
Sbjct: 101 TENAEVKMAFVGTSDLAKKL------KTALTLHNL--------------DIPLYTFDKV- 139
Query: 178 DLGRESRKAFSDSNDARKHYKYET----IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
G + K + + + I DD+ T +YTSGTTG+PKGV L+HKNL+
Sbjct: 140 -EGEKYWKEIEEIGASLTTVDLDVYRNDIHEDDLLTLIYTSGTTGSPKGVFLSHKNLVSN 198
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPH 292
++P EN +S LP H++ER Y F +GI + Y + + D+ +P+
Sbjct: 199 FTDCAHLLP-ENYKTAISFLPLCHIFERMVVYLYFYKGISVYYAENMDTIVADINDVKPN 257
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
+VP V E +Y I + +AL I A + L K+P
Sbjct: 258 GFTTVPRVLEKVYDKIVDK-----------GKALTGIKHAL-----FFWALDLGLKFKEP 301
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFY 411
+ + +I AI A KL++KK Q A+G + G+ SGG +L + +
Sbjct: 302 RK-----NSFFYKIKLAI-------ARKLIFKKWQMALGGNIVGIISGGAALQERLARVF 349
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLG--SVGHPINHTEIKIVDAETNEVLPAGSK 469
A G+ V GYGLTE+SPVIA N LG +VG + ++KI S
Sbjct: 350 WAAGIPVLEGYGLTETSPVIAVNNFERNGLGFGTVGPLLKSVKVKI-----------ASD 398
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G + +G V +GY+KN AT++A DEDG+ TGDIG + G L + R
Sbjct: 399 GEILCKGPNVTKGYYKNDEATREAFDEDGYFKTGDIGELTTE----------GFLRITDR 448
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + G+ V P +E + S+LI QI+VIG+ +R P A+IVP EE+ A +
Sbjct: 449 KKEMFKTAGGKYVAPQIIENKFMESTLIAQIMVIGEGKRFPAALIVPAFEELKKWAGKNG 508
Query: 590 IVHADASELSKEKTI 604
I + +L K+ +
Sbjct: 509 ISGSTKEDLIKDPKV 523
>gi|422923777|ref|ZP_16956920.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
gi|341643515|gb|EGS67800.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
Length = 601
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 273/592 (46%), Gaps = 67/592 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N +++ + +++ + + L G+ ++K+++FS+N RW +AD L A+
Sbjct: 28 KQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVT 87
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++ E+ +I +++ + V F+ +R I+ + +
Sbjct: 88 VPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAM-----NANI 142
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
D+ + +DE + +A ++ + +Y DD+ T +YTSGTTG PKG
Sbjct: 143 DLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANY-------DDLFTLIYTSGTTGTPKG 195
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 281
VML ++N+ Q+ + D L LP HV+ERA ++ +G Y V +
Sbjct: 196 VMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAH 255
Query: 282 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 341
+++ L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 256 VREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFVRKVL--------FTWAVNMGAKM 307
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGG 400
C + Q+QPS++ L H A+KLV K+++ +G + GG
Sbjct: 308 AVC-RQQQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGG 351
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E
Sbjct: 352 AKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GEN 409
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L VRG VM+GY+K T ++ DE G+L TGD G I +
Sbjct: 410 NEIL---------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN--------- 451
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G V + + R K+ + S G+ + P +E A + I QI VI ++ A+IVP +
Sbjct: 452 GNVFITD-RIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDS 510
Query: 581 VLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ AK L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 511 LEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|419839901|ref|ZP_14363302.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
gi|386909003|gb|EIJ73687.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
Length = 602
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 262/558 (46%), Gaps = 61/558 (10%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
++++ + L + ++K+++F+ N RW +AD L AI V + +++++
Sbjct: 40 FQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATNTAQQAE 99
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPV-FSYD 174
I NH++ L V + + +++ E ++ I+ + KS++ +++ P+ +++
Sbjct: 100 FILNHADVKILFVGDQDQYDQAFEIAHHCPKLQKIVAM---KSTIQ---LQQDPLSCTWE 153
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
I+ G ++ D R + K + D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 154 SFIETGSNVQQ---DELTQRLNQKQLS----DLFTIIYTSGTTGEPKGVMLDYANLAHQL 206
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
+ + + D LS LP H++ERA +I RG L Y N ++ L +P
Sbjct: 207 EAHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 266
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE +Y+ + ++ + R+++ I + + F L N K
Sbjct: 267 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKH---------FDLRANNKTVP 317
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
+L L LA+KLV K++ +G K GG L I LF+
Sbjct: 318 FL---------------LKKQFALADKLVLSKLRQLLGGRIKMMPCGGAKLEPAIGLFFH 362
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ +++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 363 AIGINIKLGYGMTETTATVSCWHDFQFNPNSIGTLMPKAEVKI--GENNEIL-------- 412
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VR VM+GY+K P T QA EDG+L TGD G G L + R K+
Sbjct: 413 -VRSGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQ----------GNLFITDRIKE 461
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I QI +I ++ A+IVP + + AK+L+I +
Sbjct: 462 LMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKY 521
Query: 593 ADASELSKEKTISLLYGE 610
D EL K I ++ +
Sbjct: 522 HDRLELLKNSEILKMFEQ 539
>gi|312881741|ref|ZP_07741518.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370631|gb|EFP98106.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 600
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 250/569 (43%), Gaps = 67/569 (11%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
L + V P++K+ +FS+N +W +AD L AI V S+ ++L +I N S+
Sbjct: 51 ALLALDVLPQDKIGIFSENMPQWTIADFASLQIRAITVPIYPTSTEQQLAYILNDSDVEI 110
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
L V F+ +R I+ + + I Y L R
Sbjct: 111 LFVGEQAQFDAATSIFSQCDRLRLIVTM-----------SDNIDTHQYPYATSLQRLISN 159
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 245
A S+ + + DD+ T +YTSGTTG PKGVML + N+ Q+ +
Sbjct: 160 AESNYLPLLEQ-RLSDANFDDLLTLIYTSGTTGKPKGVMLDYANVAAQLDGHNQRLSLTQ 218
Query: 246 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 304
D L LP HV+ERA +++ +G Y +K L +P M +VP YE +
Sbjct: 219 DDVSLCFLPLSHVFERAWSFYVLYKGATNCYLQDTSAIKQALVEVRPTVMCAVPRFYEKI 278
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
+S I +++ + R+++ F + C + K PS L
Sbjct: 279 FSAIHEKVAKAPLVRKII--------FTWAVNMGAKLAHC-QQTGKTPSLL--------- 320
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYG 423
L H LA+ +V K++S +G + + GG L I F+ AIG+ V++GYG
Sbjct: 321 ------LKKSHQLADSMVLSKLRSLVGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYG 374
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE+ I+ C S+G P+ E+KI NE+L VRG VM+GY
Sbjct: 375 MTETVATISCWDDGCFNPDSIGLPMPGAEVKI--GPNNEIL---------VRGPMVMRGY 423
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K T++ D++G+L TGD G+I G + + R K+ + S G+ +
Sbjct: 424 YKLAEETQKTFDDEGFLKTGDAGYIDDK----------GNVFITDRIKELMKTSGGKYIA 473
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--- 600
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 474 PQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDALEDYAKDLNIKYHDKVELIKNNQ 533
Query: 601 -----EKTISLLYGELRKWTSKCSFQIGP 624
EK + L EL K+ F++ P
Sbjct: 534 IIEMLEKRVENLQKELAKFEQIKRFKLLP 562
>gi|309243088|ref|NP_001161101.2| long-chain-fatty-acid--CoA ligase 1 [Sus scrofa]
Length = 699
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 247/549 (44%), Gaps = 82/549 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
PE + +F+ N W++ +QG A + V +E + +I N E + V+ PE
Sbjct: 147 PENFVGIFAQNRPEWVIIEQGCFAYSMVVVPLYDTLGTEAITYIINKGELSLVFVDKPEK 206
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
N + E + +K ++ IIL+ S D++E + + S + DLGR +R+
Sbjct: 207 ANLLLEGVENKLIPGLKTIILM----DSYGIDLLERGKKCGVEIMSMKALEDLGRANRR- 261
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----- 241
K + +D+A +TSGTTGNPKG M+TH+N++ + +
Sbjct: 262 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNVVSDCSAFVKVTDKTFS 310
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P+ + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 311 PSSD-DTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPR 369
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 370 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRN 409
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGV 416
+ LW +KL++ KIQS++G K + G+ P+ + A+G
Sbjct: 410 NSLW---------------DKLIFHKIQSSLG-GKVRLMVTGAAPVSATVLTFLRAALGC 453
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYG TE + + P G VG P+ + IK+VD E L A +G V V+G
Sbjct: 454 QFYEGYGQTECTAGCSLTVPGDWTAGHVGAPMPCSLIKLVDVEEMNYLAAKGEGEVCVKG 513
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L
Sbjct: 514 PNVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKL 563
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
+ GE + P ++E LRS + Q+ V G+ Q AI+VPD E + A++ V
Sbjct: 564 AQGEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLIAIVVPDVETLGHWAQKRGFV-GSF 622
Query: 596 SELSKEKTI 604
EL + K +
Sbjct: 623 EELCRNKDV 631
>gi|407939119|ref|YP_006854760.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
gi|407896913|gb|AFU46122.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
Length = 618
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/587 (25%), Positives = 267/587 (45%), Gaps = 54/587 (9%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ + + +A+ L + + P ++++ N + ADQ LATG + V + +
Sbjct: 47 AQTAERVNTWAQALAAMQLPPAARVAILLPNGLHAMCADQATLATGGVPVPLHAIDNPGS 106
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKS-SVAPDIVEEIPVFS 172
+ +I E+ L V E + +I A+R +++ + P ++ V S
Sbjct: 107 IAYILADCEASMLIVSQAEQWEKIRAVGTPFPALRAVVITDDDDAFKPTPASIDSPAVGS 166
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+ + ++ + +DD+A VYTSGTTG PKGVMLTH+N++
Sbjct: 167 LAQWLTGAGQTGAPTTRMGPQ----------ADDLAAIVYTSGTTGKPKGVMLTHRNVVS 216
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
++++ + + D FLS LP H +ER GY++ + G + Y +V L +DL+ +
Sbjct: 217 DVKAVLERIAPTVDDVFLSFLPLSHTFERTGGYYLPIAAGSCVAYARSVAQLAEDLKTIR 276
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P ++SVP +YE +++ + +++ + ++ A + + FC +
Sbjct: 277 PTVLVSVPRIYERIHAKLIEKLSPTP----------WKMQLYEAAQNKGWARFCAAQRLP 326
Query: 351 QPSYLVALIDWLWARIICAILWP-LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 409
P+ + W + A+ WP LH L K + + G + VSGG L I
Sbjct: 327 APTPDASSQAAGW---MAALPWPVLHALVAKPLLAQFG---GRVRVAVSGGAPLSPTIAK 380
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
+ +G+ + GYG+TE++PV++ N VG + E++I G
Sbjct: 381 CFLGLGLPLIQGYGMTETAPVVSVNALDDNDPACVGKALPGVEVRI-----------GDN 429
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
++VRG VM+GY+K P T + L DGWL TGD ++ G + ++GR
Sbjct: 430 HELQVRGPIVMKGYWKRPEDTAKILSPDGWLGTGD-----------QADIVNGRIYIKGR 478
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ IV STGE V P +LE A L L+ Q V+G+++ + V + E A L
Sbjct: 479 IKEIIVTSTGEKVPPGDLELALLADPLLEQAFVVGENRPFIACVAVLNAGEWPRLAADLG 538
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTV 634
+ A L+ + + K T+ + P +H+ EP+T+
Sbjct: 539 LNPQAADSLNHPSVHRAVLARIEKNTASFARYAVPRTVHLTLEPWTI 585
>gi|410099275|ref|ZP_11294247.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219297|gb|EKN12260.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
Length = 633
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/590 (26%), Positives = 283/590 (47%), Gaps = 71/590 (12%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ ++F +++ +++ GL +GV + ++L S+ W++ + M GA N
Sbjct: 25 KTTNKFEPTTYTQVREQVYTLGAGLVALGVMKGDNMALLSEGRNAWIIGELAMFYAGATN 84
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I + +R II+ +K
Sbjct: 85 VPLSIKLEEANDLLFRLTHADVKYIMVSGNQL-KKIRSIVDKLPLLRQIIIFDDQKEYQE 143
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG----SDDIATYVYTSGTT 217
+EIP+ ++I++G+E A ++ IG +DD AT YTSGTT
Sbjct: 144 ----KEIPL---SKVIEMGQEYLSAHPLE-------EFLAIGQSLTNDDYATITYTSGTT 189
Query: 218 GNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFS-RG----- 271
+PKGV+LTH+N + V ++ + L +LP H + G++IF +G
Sbjct: 190 ADPKGVILTHRNYTANVEQSLTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMYKGASVAT 249
Query: 272 IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL-I 327
+++ T + LK+ +++ ++P+ ++SVP + + I++ I A +V R +
Sbjct: 250 VQVGRTGMETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQGI---RAQGNMVNRLFHM 306
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
++ AYT W + +L P+ L + +++ K++
Sbjct: 307 GLNVAYTY--------------NGDGGDDKGRGWRF------LLKPVVSLFDSIIFSKVR 346
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
G K + GG L + FY AIG+ + GYGL+E++PVI+ P + GS G
Sbjct: 347 ENFGSELKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATPVISTNGPRHHRFGSSGV 406
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
+ ++KI D E E LP G KG + +RG VM GY+KNP++T + + +DGWL TGD+G
Sbjct: 407 LVQPLDLKICDQEGKE-LPLGEKGEIVIRGENVMAGYWKNPASTTETI-KDGWLYTGDMG 464
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQ 565
++ G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 465 YMGKD----------GLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLLLYNN 514
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELRKW 614
A++VP+K+ + + LS + D +E KE+ I ++ ++ ++
Sbjct: 515 QNPYTVALVVPNKDHL---KRHLSHLQLDLNTEKGKEEAIRIIQKQIDRF 561
>gi|300114859|ref|YP_003761434.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
gi|299540796|gb|ADJ29113.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
Length = 601
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 262/568 (46%), Gaps = 71/568 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ E+ + L + P ++++L NS W+ +Q L G + V +
Sbjct: 51 AEMATEVARWQAALSEEELNPGDRVALMLRNSREWVFFEQAALGLGLVVVPLYINDRPDN 110
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI-VEEIPVFS 172
+I +SE L +E + + I + + R I S++P + S
Sbjct: 111 ARYILKNSEVKLLLIEGYQQWQEIKQWWALRKLARVI--------SLSPFAETQRQKRLS 162
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
Y L K SN ++ D +AT VYTSGTTG PKGVML+H N+L
Sbjct: 163 Y-----LQEWLPKMADKSNPGPRN-------PDALATIVYTSGTTGLPKGVMLSHHNILW 210
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
S P D FLS LP H ER GY++ G ++ YT ++ L +DL +
Sbjct: 211 NAHSSLHSTPVYEDDVFLSFLPLSHTLERTIGYYLPMMAGAQVAYTRSIAKLAEDLATVK 270
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P ++SVP ++E ++ QI+ + + + RAL R++ A G+ +
Sbjct: 271 PTVLVSVPRIFERTHN----QIYDTLQEKNPLERALFRLAVA--------AGW------R 312
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
Q +Y W +C L+ L +++V +++ + G + V GG L ++
Sbjct: 313 QFNYQQGHAPW---HPLCL----LNPLLQQIVGRQVLAQFGGRLRIVVCGGAPLAFNVAK 365
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
A+G+ + GYGLTE+SPVI+ N SVG P+ EI+I E NE+L S
Sbjct: 366 ELLALGLPLIQGYGLTETSPVISVNHLNNNDPKSVGTPLQDVEIRI--GEHNELL-GHSP 422
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G VM GY+ NP AT + +DE GWL+TGD ++R G L + GR
Sbjct: 423 G--------VMLGYWNNPKATAEVIDEKGWLHTGD-----------QARIEQGRLYITGR 463
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ IVL+TGE + P E+E A SL Q++VIG+ + A+IV + E A+ L+
Sbjct: 464 IKEIIVLATGEKIPPGEMETAISTDSLFDQVMVIGEGKPYLSALIVLNPEHWTTLAQELN 523
Query: 590 IVHADASELSKEKTISLLYGELRKWTSK 617
+ A L + + G + + T +
Sbjct: 524 LDPHQAQSLKHSTVLEEVLGRIEQHTRQ 551
>gi|424048004|ref|ZP_17785560.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
gi|408883314|gb|EKM22101.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
Length = 602
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/578 (26%), Positives = 266/578 (46%), Gaps = 69/578 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
I N V E P+F + + I+ + S ++ E ++D+
Sbjct: 103 IDNADVKVLFVGEQPQF-DAAVSIFDECQQLELIVAM-----SDDIELGEHAFAMTWDDF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
I G +S++ S + E +D+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 157 IAKGDDSQQPELTS-------RLEQAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 210 HDERLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+++ + + A + EG ++PS +
Sbjct: 270 AVPRFYEKIFSAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAI 414
L + LA+KLV K+++ +G + GG L I F+ AI
Sbjct: 321 ---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + ++KI E NE+L V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------V 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T++ DE G+L TGD G+I + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 525 RVELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|425065789|ref|ZP_18468909.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
gi|404383284|gb|EJZ79738.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
Length = 606
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 151/561 (26%), Positives = 264/561 (47%), Gaps = 62/561 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +Q++ F+ L + ++K+++F+ N RW +AD G + A+ V + S+++++
Sbjct: 40 QFQQDLDTFSYALLANHIGVQDKIAIFAHNMPRWTIADIGTMQVRAVVVPIYATSAAKQV 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N+++ L V + E +N E + + ++ I+ + K ++ D+ +
Sbjct: 100 EYILNNADVKILFVGDQEEYNCTLEIIDACPQIQKIVAM---KDNL--DLKNHPKACDWQ 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ G ++ +K D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 155 TFLFEGSPLQQTALQERLEQKQLT-------DLFTLIYTSGTTGEPKGVMLDYANLAHQL 207
Query: 235 RS---LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 290
++ + + D LS LP H++ERA ++ RG Y N +++ L +
Sbjct: 208 KAHDEAFTTLNVSQYDSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIR 267
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE +Y+ + ++ + RR++ I + F+ I +QK
Sbjct: 268 PTLMCAVPRFYEKIYTAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SQK 317
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P I +L + LA+KLV K++ +G + GG L +I L
Sbjct: 318 KP--------------IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGL 363
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ +IG+ V++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 364 FFHSIGINVKLGYGMTETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL----- 416
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T + EDG+L TGD G P G L + R
Sbjct: 417 ----VRGGMVMRGYYKKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDR 462
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E + I QI VI ++ A+IVP + AK+L+
Sbjct: 463 IKELMKTSNGKYIAPQYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLN 522
Query: 590 IVHADASELSKEKTISLLYGE 610
I + D EL K I ++ +
Sbjct: 523 IKYHDRLELIKHSDILQMFEQ 543
>gi|388600371|ref|ZP_10158767.1| hypothetical protein VcamD_10774 [Vibrio campbellii DS40M4]
Length = 602
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 265/579 (45%), Gaps = 71/579 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ + K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDALSLALLAQGLGVQNKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I N V E P+F ++ C + + I+ + S D+ E S+ +
Sbjct: 103 IDNADVKVLFVGEQPQFDAAVSIYDECQQ--LELIVAM-----SDDIDLGEHAFAMSWQD 155
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G +S A + E DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 156 FIAKG-------DNSQHAELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLE 208
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYM 294
+ D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 209 GHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVM 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+VP YE ++S I +++ + R+++ + + A + EG ++PS
Sbjct: 269 SAVPRFYEKIFSAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSL 319
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEA 413
+ L + LA+KLV K+++ +G + GG L I F+ A
Sbjct: 320 M---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHA 364
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG+ V++GYG+TE++ ++ C S+G + ++KI E+NE+L
Sbjct: 365 IGINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGVQVKI--GESNEIL--------- 413
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG VM+GY+K P T++ DE G+L TGD G+I + G L + R K+
Sbjct: 414 VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKEL 463
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
+ S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I +
Sbjct: 464 MKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYH 523
Query: 594 DASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
D EL K EK ++ L EL K+ F++ P
Sbjct: 524 DRVELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|378822222|ref|ZP_09845037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378598964|gb|EHY32037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 620
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 205/415 (49%), Gaps = 44/415 (10%)
Query: 205 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 264
+D+A VYTSGTTGNPKGVMLTH+N+L ++ + + + LS LP H +ER
Sbjct: 189 NDLAALVYTSGTTGNPKGVMLTHRNILSNLQGVLKSIQPSESETLLSFLPLSHTFERTAS 248
Query: 265 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 322
Y++ G + ++ NL DDL+ +P ++SVP VYE ++ ++ A + +
Sbjct: 249 YYLALGLGFTCAFNRSIANLADDLKTIRPTIIMSVPRVYEMIHG----KVMDGLAKKPPM 304
Query: 323 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 382
R + + A ++R FC ++ +D A + +K V
Sbjct: 305 VRRIFNWAVA-VGWRR----FCRENGLPVEPSALSFLDPFVAGFL-----------DKKV 348
Query: 383 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
K ++ A G +SGG +LP ++ + A+GV + GYG+TE+SP+I+ RP N
Sbjct: 349 GKTLRDAFGDRIHLFISGGAALPTNVAKVFLALGVPIFQGYGMTETSPIISVNRPGSNHP 408
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
+VG + + E+++ D + ++VRG VM+GY+ P AT++ ED WL
Sbjct: 409 NTVGPALANIEVRLGDGDE-----------IQVRGPSVMKGYWNRPEATREIFTEDDWLR 457
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD+G I + G R + GR K+ IV STGE V P +LE A L Q +
Sbjct: 458 TGDVGEI---YKDGHIR-------ITGRIKEIIVTSTGEKVPPTDLEAAVTTDRLFTQCM 507
Query: 562 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS 616
V+G D+ A+ V ++ + L + D + L K++ + ++ TS
Sbjct: 508 VVGDDRPFISALCVVNEGPWAALCEELGLDPNDPASLDKKEAKAAALRRIKAATS 562
>gi|444911063|ref|ZP_21231239.1| Long-chain-fatty-acid--CoA ligase [Cystobacter fuscus DSM 2262]
gi|444718401|gb|ELW59214.1| Long-chain-fatty-acid--CoA ligase [Cystobacter fuscus DSM 2262]
Length = 606
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 157/551 (28%), Positives = 253/551 (45%), Gaps = 87/551 (15%)
Query: 38 RIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
R+ SRR RF ++ + + A GL +GV+P ++++L S W + D +L
Sbjct: 38 RVLFSRRVGDRFEPITAAEAVRTVRGLARGLIALGVEPGQRVALMSKTRVEWPLIDYAIL 97
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
ATGA V SS+E++ I + S +VA FF ET A R
Sbjct: 98 ATGATTVPIYETSSAEQVEWILHDSGAVA------AFF----ETDALHAHQR-------- 139
Query: 157 KSSVAPDIVEEIPVFSYDEIIDLG--RESRKAFSDSNDARKHYKYETIGSDDIATYVYTS 214
E +P + +I+ G E R+ +AR + + ++ +AT +YTS
Sbjct: 140 ------ACAERLPDCRHTFVIEKGALEELRQRGEGVEEARLEERLSRLRAEHLATLIYTS 193
Query: 215 GTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 270
GTTG P+G LTH NL L + D++ D+ L LP H + +
Sbjct: 194 GTTGRPRGCELTHGNLRANVLQVMEHARDVITER--DRTLLFLPLAHALAKILFLASVEK 251
Query: 271 GIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR--RVVARALI 327
G+ + + T+ L ++L +P + +VP V E ++ +++ S AR + A +
Sbjct: 252 GLPVAFATSPGKLVEELSLVKPTWFGTVPRVLEKVFQTARQKAEQSGKARVFDLATDAAV 311
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
R S LTR Q H + ++LVY+ ++
Sbjct: 312 RYSRESVGGG----ASLLTRLQ-------------------------HGVFDRLVYRTLR 342
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
+G + VSGGG LP ++ FY +GV+V GYG+TE+SPV+ P G+VG
Sbjct: 343 GILGGQLRFIVSGGGPLPERLNHFYRGVGVQVLEGYGMTETSPVLTLNAPQAARPGTVGQ 402
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
P+ T ++I AE E++ V+G QV +GYF+N AT++ ++ DGWL TGD+G
Sbjct: 403 PVPGTTVRI--AEDGEIV---------VKGPQVFRGYFQNEEATRRTVNPDGWLQTGDLG 451
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
S G L + GR K+ +V + G+NV P LE+ + L+ Q +V+G+
Sbjct: 452 ----------SLDAQGFLRITGRKKEILVTAAGKNVAPGPLEDRIRENPLVSQAMVVGEG 501
Query: 567 QRRPGAIIVPD 577
+ A++ D
Sbjct: 502 KPFVAALVTLD 512
>gi|114321276|ref|YP_742959.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227670|gb|ABI57469.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 620
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 250/550 (45%), Gaps = 66/550 (12%)
Query: 29 RNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
R DA A R + + +R + + + + + L G++ + +++ N W
Sbjct: 29 RRSPDAPAYR-QYDYAHQSWRTYTWRETAEAVRRWQATLAREGLQRGDTVAVMLPNGWPW 87
Query: 89 LVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMR 148
++ DQ LA G + V + + + +I S + L +E E + I A++
Sbjct: 88 VLFDQAALALGLVVVPLYTSDRPDNVAYILEDSGARVLILEQAETWQAIQRGGHRLNAVQ 147
Query: 149 FIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIA 208
+++ G P S ++ L +A+ +A
Sbjct: 148 RVVVTQGVA-----------PADSRGTVVAL-----EAWLAPEGDPGDPPEPPRDGHALA 191
Query: 209 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI- 267
+ VYTSG+TG PKGVML+H+N+L + + D FLS LP H ER GY++
Sbjct: 192 SIVYTSGSTGRPKGVMLSHRNMLENAYAGLQRIAIYPDDLFLSFLPLSHTLERTIGYYLP 251
Query: 268 FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
G + Y +V +L +DL ++P ++SVP +YE +Y IQ+ + S R + +
Sbjct: 252 IMTGSTVAYARSVPDLPEDLATHRPTALVSVPRIYERVYGRIQEGLKAKSGLARALFHSA 311
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
+R+ + ++R +G C ++ + WP L +LV K+
Sbjct: 312 VRV--GWHRYQR-GQGLCGWHPRE-------------------LAWP---LLHRLVAGKV 346
Query: 387 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
+ +G + +SGG L + + ++GV V GYGLTESSPVI+ N G+VG
Sbjct: 347 TARLGGRVRVAISGGAPLSREVAQLFLSLGVPVLEGYGLTESSPVISVNTLEDNRPGTVG 406
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
P+ E++I G +G + RG +M GY+ NP AT ALD DGWL+TGD
Sbjct: 407 KPLPGVEVRI-----------GEQGELLARGPNIMLGYWNNPEATAAALDRDGWLHTGDQ 455
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
+ G + + GR K+ IV++ GE V P ++E A + Q++V+G+
Sbjct: 456 ARLDDE----------GRITITGRLKEIIVMANGEKVPPADMELAIANDPVFEQVMVVGE 505
Query: 566 DQRRPGAIIV 575
+ GA++V
Sbjct: 506 GRPYLGALVV 515
>gi|218708425|ref|YP_002416046.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
gi|218321444|emb|CAV17396.1| Long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
Length = 602
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 264/578 (45%), Gaps = 84/578 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLHIYNHS 121
A+GLRV ++K+ +FS+N +W VAD L + V + + ++++ I N
Sbjct: 53 LAQGLRV-----QDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNTAAQSSYIIQNAD 107
Query: 122 ESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
+ E +F ++ E L AM I L G + +V S+ E
Sbjct: 108 VKILFVGEQAQFDAAVSLFEECEQLEVVVAMSDDIDLQGHRFAV-----------SWKEF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
+ G E ++A D + DD+ T +YTSGTTG PKGVML + N+ +Q++
Sbjct: 157 MARGVEDQQAELD-------VRLADACMDDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 210 HDERLSLSKDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVKPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+V+ + + + + EG + PS++
Sbjct: 270 AVPRFYEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------RTPSFM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAI 414
L H LA+KLV K+++ +G + + GG L I F+ AI
Sbjct: 321 ---------------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + E+KI G+K + V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAKDEILV 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T + DE G+L TGD G + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSGGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 525 RVELVKNHQIVEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|298375259|ref|ZP_06985216.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
gi|298267759|gb|EFI09415.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
Length = 633
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 278/588 (47%), Gaps = 68/588 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ RF S++ + + GL +GV+ + ++L S+ W++ + M GA N
Sbjct: 26 KTGKRFEPTTYSEVRDLVYEEGAGLISLGVRKGDNMALLSEGRNAWIIGELAMFYAGATN 85
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I A+R II+L +
Sbjct: 86 VPLSIKLEEANDLLFRLVHADVKYIMVSGQQ-LKKIRAIKDQLPAVRKIIVLDEQAEYQD 144
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
++ S EI +G K + + + +++G+DD AT YTSGTT +P
Sbjct: 145 REM-------SLSEIRRMG----KVYLGIHPIEEFLAIGQSLGNDDYATITYTSGTTADP 193
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IEL 274
KGV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 KGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATVQV 253
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ +++ ++P+ ++SVP + + I++ I + +RI +
Sbjct: 254 GRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQGIRARGKNAVRLFNLALRIGY 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y EG RI +L PL L +KL++ K++ G
Sbjct: 314 IYNGDSDEEEGKGF-------------------RI---LLKPLVRLFDKLLFAKVRENFG 351
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K + GG L + FY A+G+ + GYGL+E++P+I+ P +V GS G +
Sbjct: 352 GELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATPIISTNGPRRHVFGSSGVLVRP 411
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D + N VLP G KG + +RG VM GY+KNP++T + E GWL TGD+G++
Sbjct: 412 LDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPASTADTVKE-GWLYTGDMGYMR- 468
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRR 569
G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 469 ----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPY 518
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTISLLYGELRKW 614
A++VP+KE + R + H + S+ +E+ I ++ ++ ++
Sbjct: 519 TTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIRIIQRQIDRF 561
>gi|351728737|ref|ZP_08946428.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 628
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/588 (26%), Positives = 269/588 (45%), Gaps = 56/588 (9%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + +A+ L + + ++++ N + ADQ LATG + V + +
Sbjct: 57 AQAAQHVGTWAQALAAMQLPAAARVAILLPNGLNAMCADQSALATGCVPVPLHAIDNPGS 116
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS--VAPDIVEEIPVF 171
+ +I ++ L V + E + +I A+R +++ S A E V
Sbjct: 117 IAYILADCDASMLIVSHAEQWEKIRAVGTRFPALRAVVITDDDTPSFKAAAGSGEGPAVG 176
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
S + + + A +D A K +DD+A VYTSGTTG PKGVMLTH N++
Sbjct: 177 SLAQWL-----AGAAHADGAPAPKAPD-----ADDLAAIVYTSGTTGKPKGVMLTHHNVV 226
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
++++ D + D FLS LP H +ER GY++ + G + Y +V L +DL+
Sbjct: 227 SDVKAVLDRIAPTVDDVFLSFLPLSHTFERTGGYYLPIAAGSCVAYARSVPQLAEDLKTV 286
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P ++SVP +YE +++ + +++ + ++ A R + FC +
Sbjct: 287 RPTVLVSVPRIYERIHAKLLEKLSPTP----------WKMQLYEAAQHRGWARFCTMQGL 336
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P A D A + A+ WP + + LV K + + G + VSGG L I
Sbjct: 337 PAP----AAEDGRAAGWMAALPWP---VLQALVAKPLLAQFGGRVRVAVSGGAPLSPTIA 389
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
+ +G+ + GYG+TE++PV++ N VG + +++I G
Sbjct: 390 KCFLGLGLPLIQGYGMTETAPVVSVNSLDDNDPACVGKALPGVDVRI-----------GE 438
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
++VRG VM+GY+K P T + L DGWL TGD ++ G + ++G
Sbjct: 439 NRELQVRGPIVMKGYWKRPEDTAKILSPDGWLGTGD-----------QAELVNGRIYIKG 487
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R K+ IV STGE + P +LE A L L+ Q V+G+++ + V + E A L
Sbjct: 488 RIKEIIVTSTGEKIPPGDLELALLADPLLEQAFVVGENRPFIACVAVLNAGEWQRLAADL 547
Query: 589 SIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTV 634
+ D L+ + + K T+ + P +H+ +P+T+
Sbjct: 548 GLSAQDTDSLNHPSVHRAVLARIEKNTASFARYAVPRAVHLTLDPWTI 595
>gi|156973145|ref|YP_001444052.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
gi|156524739|gb|ABU69825.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
Length = 602
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 261/566 (46%), Gaps = 71/566 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLHIYNHSESVALAVE 129
G+ ++K+ +FS+N +W +AD L + V + + ++++ I N V E
Sbjct: 56 GLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYIIDNADVKVLFVGE 115
Query: 130 NPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFS 188
P+F ++ C + + I+ + S D+ + S+ + I G S++A
Sbjct: 116 QPQFDAAVSIYDECQQ--LELIVAM-----SDDIDLGDHAFAMSWQDFIAKGDNSQRA-- 166
Query: 189 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK 248
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D
Sbjct: 167 -----ELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQCLSLTEDDV 221
Query: 249 FLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSG 307
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S
Sbjct: 222 SLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSA 281
Query: 308 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 367
I +++ + R+++ + + A + EG ++PS +
Sbjct: 282 IHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM------------ 320
Query: 368 CAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE
Sbjct: 321 ---LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTE 377
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
++ ++ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 378 TTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKM 426
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 427 PEETEKTFDEHGFLKTGDGGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQV 476
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------ 600
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 477 VEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVE 536
Query: 601 --EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 537 MLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|50604627|gb|AAT79534.1| acyl coenzyme A synthetase long-chain 1 [Sus scrofa]
Length = 683
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 247/549 (44%), Gaps = 82/549 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
PE + +F+ N W++ +QG A + V +E + +I N E + V+ PE
Sbjct: 131 PENFVGIFAQNRPEWVIIEQGCFAYSMVVVPLYDTLGTEAITYIINKGELSLVFVDKPEK 190
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
N + E + +K ++ IIL+ S D++E + + S + DLGR +R+
Sbjct: 191 ANLLLEGVENKLIPGLKTIILM----DSYGIDLLERGKKCGVEIMSMKALEDLGRANRR- 245
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----- 241
K + +D+A +TSGTTGNPKG M+TH+N++ + +
Sbjct: 246 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNVVSDCSAFVKVTDKTFS 294
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P+ + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 295 PSSD-DTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPR 353
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 354 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRN 393
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGV 416
+ LW +KL++ KIQS++G K + G+ P+ + A+G
Sbjct: 394 NSLW---------------DKLIFHKIQSSLG-GKVRLMVTGAAPVSATVLTFLRAALGC 437
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYG TE + + P G VG P+ + IK+VD E L A +G V V+G
Sbjct: 438 QFYEGYGQTECTAGCSLTVPGDWTAGHVGAPMPCSLIKLVDVEEMNYLAAKGEGEVCVKG 497
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L
Sbjct: 498 PNVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKL 547
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
+ GE + P ++E LRS + Q+ V G+ Q AI+VPD E + A++ V
Sbjct: 548 AQGEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLIAIVVPDVETLGHWAQKRGFV-GSF 606
Query: 596 SELSKEKTI 604
EL + K +
Sbjct: 607 EELCRNKDV 615
>gi|15602790|ref|NP_245862.1| FadD protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|383309925|ref|YP_005362735.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
gi|12721245|gb|AAK03009.1| FadD [Pasteurella multocida subsp. multocida str. Pm70]
gi|380871197|gb|AFF23564.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
Length = 606
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/561 (26%), Positives = 264/561 (47%), Gaps = 62/561 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +Q++ F+ L + ++K+++F+ N RW +AD G + A+ V + S+++++
Sbjct: 40 QFQQDLDTFSYALLANHIGVQDKIAIFAHNMPRWTIADIGTMQVRAVVVPIYATSAAKQV 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N+++ L V + E +N E + + ++ I+ + K ++ D+ +
Sbjct: 100 EYILNNADVKILFVGDQEEYNCTLEIIDACPQIQKIVAM---KDNL--DLKNHPKACDWQ 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ G ++ +K D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 155 TFLLEGSPLQQTALQERLEQKQLT-------DLFTLIYTSGTTGEPKGVMLDYANLAHQL 207
Query: 235 RS---LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 290
++ + + D LS LP H++ERA ++ RG Y N +++ L +
Sbjct: 208 KAHDEAFTTLNVSQYDSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIR 267
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE +Y+ + ++ + RR++ I + F+ I +QK
Sbjct: 268 PTLMCAVPRFYEKIYTAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SQK 317
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P I +L + LA+KLV K++ +G + GG L +I L
Sbjct: 318 KP--------------IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGL 363
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ +IG+ V++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 364 FFHSIGINVKLGYGMTETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL----- 416
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T + EDG+L TGD G P G L + R
Sbjct: 417 ----VRGGMVMRGYYKKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDR 462
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E + I QI VI ++ A+IVP + AK+L+
Sbjct: 463 IKELMKTSNGKYIAPQYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLN 522
Query: 590 IVHADASELSKEKTISLLYGE 610
I + D EL K I ++ +
Sbjct: 523 IKYHDRLELIKHSDILQMFEQ 543
>gi|84393678|ref|ZP_00992428.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
gi|84375677|gb|EAP92574.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
Length = 602
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 266/583 (45%), Gaps = 79/583 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q+I + L G++ ++K+ +FS+N +W VAD L + V + + ++++
Sbjct: 43 QQIDTLSLALLAHGLRVQDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNTAAQSSYI 102
Query: 117 IYNHSESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
I N + E +F ++ E L AM I L G + +V
Sbjct: 103 IQNADVKILFVGEQAQFDAAVSLFEECEQLEVVVAMSDDIDLQGHRFAV----------- 151
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
S+ E + G E ++A D + DD+ T +YTSGTTG PKGVML + N+
Sbjct: 152 SWKEFMARGVEDQQAELD-------VRLADACMDDLLTLIYTSGTTGQPKGVMLDYTNVG 204
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQ 290
+Q++ + + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 YQLKGHDERLSLSKDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVK 264
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE ++S I +++ + R+V+ + + + + EG +
Sbjct: 265 PTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------R 315
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 409
PS++ L H LA+KLV K+++ +G + + GG L I
Sbjct: 316 TPSFM---------------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGR 360
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ AIG+ V++GYG+TE++ ++ C S+G + E+KI G+K
Sbjct: 361 FFHAIGINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAK 409
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
+ VRG VM+GY+K P T + DE G+L TGD G + G L + R
Sbjct: 410 DEILVRGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHFDEN----------GNLFITDR 459
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELN 519
Query: 590 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IKYHDRVELVKHHQIVEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|427384503|ref|ZP_18881008.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
gi|425727764|gb|EKU90623.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
Length = 616
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 159/590 (26%), Positives = 269/590 (45%), Gaps = 66/590 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + A L +GV+ EE + +FS N L AD G A A+ + + SS +
Sbjct: 54 NQFSQTVRQVANALVELGVQEEENIGIFSQNKPECLYADFGAFANRAVTIPLYATSSPAQ 113
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ + V ++ +++ +I+ +V D + ++ +
Sbjct: 114 AQYIINDAQIRYIFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVRDPRDMTSIY-F 169
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
DE ++ G+ N+ + DD+A +YTSGTTG PKGVML H N +
Sbjct: 170 DEFLETGK------GLPNNDIVEERTSRASDDDLANILYTSGTTGEPKGVMLHHSNYIEA 223
Query: 234 IRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 290
R ++DI + D+ +SM LP HV+E+A Y +G+++ + +++ ++ +
Sbjct: 224 FR-IHDIRLVDMTDQDISMNFLPLTHVFEKAWTYLCIYKGVQICINLRPVDIQTTIKEIR 282
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M SVP +E +Y+G+Q++I + ++ + I++ +I+ R K
Sbjct: 283 PTLMCSVPRFWEKVYAGVQEKIAQETGLKKAMMLDAIKVG-------KIH-NIDYLRKGK 334
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 408
P ++ L + EK VY ++ IGI + G ++P I
Sbjct: 335 TPPLMLHL---------------KYKFYEKTVYALLKKTIGIENGNFFPTAGAAVPDEIC 379
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F ++G+ + VGYGLTES+ ++ + +GSVG + E+KI E NE+L
Sbjct: 380 EFVHSVGINMLVGYGLTESTATVSCFLNSGYEIGSVGTIMPDVEVKI--GEENEIL---- 433
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+RG + +GY+K AT A+D+DGW +TGD G++ G L L
Sbjct: 434 -----LRGKTITKGYYKKAEATAAAIDKDGWFHTGDAGYLK-----------GDQLYLTE 477
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R KD S G+ V P LE I QI +I ++ A+IVP V AK
Sbjct: 478 RIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEK 537
Query: 589 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + D EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 538 GIEYKDMEELLQHPKILGLF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 586
>gi|150007270|ref|YP_001302013.1| long-chain-fatty-acid-CoA ligase [Parabacteroides distasonis ATCC
8503]
gi|149935694|gb|ABR42391.1| long-chain-fatty-acid-CoA ligase, putative [Parabacteroides
distasonis ATCC 8503]
Length = 633
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/588 (26%), Positives = 276/588 (46%), Gaps = 68/588 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ RF S++ + + GL +GV+ + ++L S+ W++ + M GA N
Sbjct: 26 KTGKRFEPTTYSEVRDLVYEEGAGLVSLGVRKGDNMALLSEGRNAWIIGELAMFYAGATN 85
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I A+R II+L +
Sbjct: 86 VPLSIKLEEANDLLFRLVHADVKYIMVSGLQ-LKKIRAIKDKLPAVRKIIVLDEQAEYQD 144
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
++ S EI +G K + + + +++G+DD AT YTSGTT +P
Sbjct: 145 REM-------SLSEIRRMG----KVYLGIHPLEEFLAIGQSLGNDDYATITYTSGTTADP 193
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IEL 274
KGV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 KGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATVQV 253
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ +++ ++P+ ++SVP + + I++ I + +RI +
Sbjct: 254 GRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQGIRARGKNAVRLFNLALRIGY 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y EG + L PL L +KL++ K++ G
Sbjct: 314 IYNGDSDEEEG----------------------KGFRVFLKPLIRLFDKLLFTKVRENFG 351
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K + GG L + FY A+G+ + GYGL+E++P+I+ P +V GS G +
Sbjct: 352 GELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATPIISTNGPRRHVFGSSGVLVRP 411
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D + N VLP G KG + +RG VM GY+KNP++T + E GWL TGD+G++
Sbjct: 412 LDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPASTADTVKE-GWLYTGDMGYMR- 468
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRR 569
G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 469 ----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPY 518
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTISLLYGELRKW 614
A++VP+KE + R + H + S+ +E+ I ++ ++ ++
Sbjct: 519 TTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIRIIQRQIDRF 561
>gi|312139004|ref|YP_004006340.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311888343|emb|CBH47655.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 597
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 245/526 (46%), Gaps = 87/526 (16%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+GL GV P +++ L S W + D + A GA++V SS E++ I S +
Sbjct: 59 AKGLVASGVAPGDRVVLLSATRFEWTLFDFAIWAAGAVSVPIYDSSSPEQVQWIVEDSGA 118
Query: 124 VALAVENPEFFNRIAE-----TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
V VE + A+ T + R + L + + +A D+V +
Sbjct: 119 VLAIVERAQHAAGFADAGPDLTRVLQIEDRAVEKLIAEGAGLADDVVRQ----------- 167
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
+ + +DD+A+ VYTSGTTG PKG +LTH+N L ++R +
Sbjct: 168 -------------------RIAGVSADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGIL 208
Query: 239 DIVPAE---NGDKFLSMLPPWHVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYM 294
E G++ L+ LP HV RA +F + GI+ ++ + + +R++P+ +
Sbjct: 209 VASIGEVARPGNRMLTFLPLAHVLARAVSLAMFEAGGIQAHWSNFGTVAEQFERFRPNVI 268
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP V+E ++ S+A + R +FA+ I + + + PS+
Sbjct: 269 LGVPRVFE--------KVRDSAAHTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSF 318
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
L L AR H LA++LV++K+++A+G +SGGG+L + F+
Sbjct: 319 L------LKAR---------HALADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRG 363
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + GYGLTES+ P +G+VG P++ ++I + G ++
Sbjct: 364 AGIPIFEGYGLTESTAAHCVNVPGEQKIGTVGRPMSGNSVRIA-----------ADGEIE 412
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+ G V GY++N AT D DGW+ TGD+G + G L+L GR KD
Sbjct: 413 LAGGVVFGGYWRNEEATVDVFD-DGWMRTGDLGELDDD----------GYLILTGRKKDL 461
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+V + G+NV P LE+ ++LI Q VV+G + GA++ D E
Sbjct: 462 LVTAGGKNVSPGPLEDRLRSNALISQAVVVGDGRPFIGALLTLDPE 507
>gi|163802678|ref|ZP_02196569.1| leucine transcriptional activator [Vibrio sp. AND4]
gi|159173566|gb|EDP58386.1| leucine transcriptional activator [Vibrio sp. AND4]
Length = 602
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 271/586 (46%), Gaps = 85/586 (14%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q+I + L G+ ++K+ +FS+N +W +AD L + V S++ + +I
Sbjct: 43 QQIDALSLALLAQGLGIQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTSTAAQSAYI 102
Query: 118 YNHSESVALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
++++ L V E P+F AA+ S+ + + + + +
Sbjct: 103 IDNADVKVLFVGEQPQF----------DAAV-----------SIYDECQQLELIVAMSDD 141
Query: 177 IDLGRE----SRKAFSDSNDARKHY----KYETIGSDDIATYVYTSGTTGNPKGVMLTHK 228
I+LG S K F +D R+ + E DD+ T +YTSGTTG PKGVML +
Sbjct: 142 IELGEHAFAMSWKDFIAKSDGRQQAELDARLEQATEDDLLTLIYTSGTTGQPKGVMLDYA 201
Query: 229 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQ 287
N+ Q+ + D L LP HV+ERA +++ +G Y ++D L
Sbjct: 202 NISAQLEGHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALS 261
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+P M +VP YE ++S I +++ + R+++ + + +A + EG
Sbjct: 262 EVRPTVMSAVPRFYEKIFSAIHEKVARAPVHRKIILTWAVNMGAKMSACHQ--EG----- 314
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 406
++PS L L + LA+KLV K+++ +G + GG L
Sbjct: 315 --RKPSLL---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI D NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKIGD--NNEIL-- 413
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
VRG+ VM+GY+K P T++ DE G+L TGD G+I + G + +
Sbjct: 414 -------VRGAMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNVFI 456
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAK 516
Query: 587 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRVELIKHHQIVEMLEKRVNNLQKELAKFEQVKKFKLLP 562
>gi|262166521|ref|ZP_06034258.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
gi|262026237|gb|EEY44905.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
Length = 601
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 160/570 (28%), Positives = 263/570 (46%), Gaps = 79/570 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES-VALAVE 129
G+ ++K+++FS+N RW +AD L A+ V ++ E+ +I ++++ V E
Sbjct: 56 GIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGE 115
Query: 130 NPEFFNRIAE-TLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFS 188
P+F +++ C + +R I+ + + D+ + +D+ F
Sbjct: 116 QPQFDAALSQFEQCPE--LRLIVAM-----NPNIDLKQASCAMHWDD-----------FV 157
Query: 189 DSNDARKHYKY----ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 244
N + H E DD+ T +YTSGTTG PKGVML ++N+ Q+ +
Sbjct: 158 AQNQTKDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLT 217
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 303
D L LP HV+ERA ++ +G Y V +++D L +P M +VP YE
Sbjct: 218 QDDVSLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEK 277
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
++S I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 278 IFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL-------- 320
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGY 422
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LKQNHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE++ I+ S+G + ++KI E NE+L VRG VM+G
Sbjct: 374 GMTETTATISCWDDYSFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRG 422
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K T ++ DE G+L TGD G I + G L + R K+ + S G+ +
Sbjct: 423 YYKLEKETAESFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYI 472
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 600
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHS 532
Query: 601 ------EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 533 QVLEMFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|72161435|ref|YP_289092.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
gi|71915167|gb|AAZ55069.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
Length = 598
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 254/575 (44%), Gaps = 106/575 (18%)
Query: 26 VFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNS 85
VFTR + A R V C ++ ++++ A+ L G+ ++++L S
Sbjct: 22 VFTRAAQEPNAVMFRRLVDGAWRDVTC-AEFHRDVMGVAKALIAAGINHGDRVALMSRTR 80
Query: 86 CRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKA 145
W V D + G + V SS E++ I S S VEN E R+
Sbjct: 81 YEWTVIDYAIWTIGGVTVPIFDTSSEEQVEWILRDSGSTLAFVENDEHAERV-------- 132
Query: 146 AMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAF----SDSNDARKHYKYET 201
+V+ ++E D I+ + +S AF +D D+ +
Sbjct: 133 ------------RAVSAQLLEP------DRIVQIESDSFPAFVATGADVADSVVEERRAA 174
Query: 202 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSMLPPW 256
G DD+AT +YTSGTTG PKG LT +NL + S + D+ E G L LP
Sbjct: 175 TGLDDLATLIYTSGTTGRPKGCELTQRNLAFDVMSVNSGPMKDVFTME-GRSTLLFLPLA 233
Query: 257 HVYER----AC-------GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY 305
H R C G+F S G +L+ D L ++P ++++VP V+E +Y
Sbjct: 234 HSLARIIQVGCVETKTVMGHFP-STGPDLL--------DALASFRPMFLLAVPRVFEKVY 284
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
+ +++ S + R + AY+ K + G L R
Sbjct: 285 NKAEQKAIASGKGD--IFRKAAETAIAYS--KALDTGKVS----------------LGLR 324
Query: 366 IICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
+ A+ LVY+KI +A+G +K VSGG +L + F+ IG+ V GYGL
Sbjct: 325 LKRAVF-------SLLVYRKILAAVGGQAKYAVSGGSALGERLGHFFRGIGLTVLEGYGL 377
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE+S A P N +G+VG PI T I+I D G + V+G VM+GY+
Sbjct: 378 TETSAPTTANAPDTNKIGTVGRPIPGTSIRIAD-----------DGEILVKGDNVMRGYW 426
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
NP ATK+A EDGW +GDIG + G L + GR K+ IV + G+NV P
Sbjct: 427 NNPKATKEAFTEDGWYRSGDIGELDEE----------GFLRITGRKKEIIVTAGGKNVAP 476
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+E+ +++ Q +V+G +++ A+I D E
Sbjct: 477 AVIEDRIRSHAIVSQCMVVGDNRKFVAALITIDPE 511
>gi|386389632|ref|ZP_10074446.1| AMP-binding enzyme [Haemophilus paraphrohaemolyticus HK411]
gi|385695402|gb|EIG25964.1| AMP-binding enzyme [Haemophilus paraphrohaemolyticus HK411]
Length = 592
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 161/605 (26%), Positives = 277/605 (45%), Gaps = 83/605 (13%)
Query: 14 LSSLDYHR-HGFRVFTRNCVDAVATRIRISRRNHRFRVFCE---SKLEQEILDFAEGLRV 69
+S+LD+H + R+ +N + A R + + +C+ S +QEI + + L
Sbjct: 1 MSALDFHFVNRLRLQAKNFANRTALRFQKQGK------WCDMQWSTFQQEIDNLSLALIA 54
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
G++ ++K+ +F+ N RW +AD G + + V + ++ ++ +I N ++ L
Sbjct: 55 QGIEIQDKIGIFAHNMPRWSIADFGAMQARVVTVPIYATNTPSQVEYIINDADIKIL--- 111
Query: 130 NPEFFNRIAETLCS---KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKA 186
F A+ C+ + ++ + KSS+ ++ ++ I +
Sbjct: 112 ---FVGEQAQMDCAIQIANSCTQLVKIVAMKSSI--NLHNHPLACHWESFIQV------- 159
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 246
D N + + DD+ T +YTSGTTG+PKGVML + NL HQ++S +
Sbjct: 160 --DKNMTELEARIASKRLDDLFTLIYTSGTTGDPKGVMLDYANLAHQLQSHDQALNITEQ 217
Query: 247 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 305
D LS LP H++ERA +IF RG Y N ++ L +P M +VP YE +Y
Sbjct: 218 DVSLSFLPLSHIFERAWVAYIFHRGATNCYLEDTNQIRQALVETKPTVMCAVPRFYEKIY 277
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WA 364
+ + ++ + RR + +A A ++ Y+ +R WL W
Sbjct: 278 AAVLDKVEKAPFIRRTL------FHWAIQAGEKHYQSAIPSR-------------WLKWQ 318
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 423
H A+KLV K+++ +G + GG L I F+ ++GV V++GYG
Sbjct: 319 ----------HKWADKLVLSKLRALLGGQVRMMPCGGAKLEPTIGKFFHSLGVNVKLGYG 368
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
+TE++ ++ S+G + + E+KI E NE+L VRG VM+GY
Sbjct: 369 MTETTATVSCWEDHGFNPNSIGKLMPNVEVKI--GENNEIL---------VRGGMVMRGY 417
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P T A DG+L TGD G + + G L + R K+ + S G+ +
Sbjct: 418 YKKPEETANAFTADGFLKTGDAGEMDEN----------GNLHITDRIKELMKTSNGKYIA 467
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 603
P +E + I QI +I ++ A+IVP + + AK+L+I + D EL K
Sbjct: 468 PQYIEGKIGKDKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRLELIKHSE 527
Query: 604 ISLLY 608
I ++
Sbjct: 528 IIQMF 532
>gi|90411921|ref|ZP_01219929.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
gi|90327179|gb|EAS43551.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
Length = 604
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 249/552 (45%), Gaps = 65/552 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
++I A + G+ ++K+++FS+N RW V D L + V ++ ++ ++
Sbjct: 43 EQIQQLAIAMLAHGMNVQDKVAIFSNNMPRWTVTDFAALYNRCVIVPIYPTNTPQQAAYV 102
Query: 118 YNHSESVALAV-ENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD--IVEEIPVFSYD 174
N ++ L V E + I R I L V PD +V F
Sbjct: 103 LNDADVRILFVGEQAQLDAAIGIAEGCPNLERIITL---SDDLVLPDNSLVCSFNDFLCT 159
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+L E ++ +D+ DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 160 ATPELEAELQQRLNDT------------AMDDLLTLIYTSGTTGTPKGVMLDYANIAAQL 207
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHY 293
+ + GD L LP HV+ERA +++ RG I T LK+ L +P+
Sbjct: 208 VGHDQNLSLDEGDTSLCFLPLSHVFERAWTFYVLHRGAINHYLTDTNQLKEALAEVKPNV 267
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP VYE +YS + ++ + R++V ++A R+ C + +QPS
Sbjct: 268 MAAVPRVYEKIYSTVHDKVSRAPFHRKLV------FTWAVNMGARM--AVC-HQEHRQPS 318
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
L+ + H LA K+V K++ +G + K GG L I F+
Sbjct: 319 KLLTMS---------------HNLANKVVLSKLRDILGGNIKFMPCGGAKLDESIGRFFH 363
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
AIG+ V++GYG+TE++ ++ C S+G + EIKI E NE+L
Sbjct: 364 AIGINVKLGYGMTETTATVSCWDDQCFNPDSIGMAMPGAEIKI--GENNEIL-------- 413
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
VRG VM+GY+ P T + EDG+L TGD G G L + R K+
Sbjct: 414 -VRGPMVMRGYYNMPEETAKNFTEDGFLKTGDAGHFDEQ----------GNLFITDRIKE 462
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E A + I QI VI ++ A+IVP + + A+ L+I +
Sbjct: 463 LMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDTLEEHARELNIKY 522
Query: 593 ADASELSKEKTI 604
D EL K I
Sbjct: 523 HDRLELVKNSQI 534
>gi|301059328|ref|ZP_07200255.1| AMP-binding enzyme [delta proteobacterium NaphS2]
gi|300446557|gb|EFK10395.1| AMP-binding enzyme [delta proteobacterium NaphS2]
Length = 603
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/543 (26%), Positives = 258/543 (47%), Gaps = 60/543 (11%)
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
+G++ + +S+ DN W++ D G+ G V + ++ ++ ++ +S+S VE
Sbjct: 53 MGLEKGDCVSIIGDNCPEWVIIDMGVQCAGGTAVGVYATNAWPQVAYVLGNSDSKFFFVE 112
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSD 189
N E ++ + KA +++W + E+ V ++D+I+++GR D
Sbjct: 113 NEEQLDKWLQ-FRDKAPRLKKVIVWDLEGLRH---FEDEMVMTFDDILEMGR----GVLD 164
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 249
+ + + +D++ +YTSGTTG PKG MLTH+NL+ +++ P ++ D+
Sbjct: 165 KDSQPFESRMARVVPEDVSMLIYTSGTTGPPKGAMLTHRNLMWMGQAITTENPMDDEDEV 224
Query: 250 LSMLPPWHVYER---ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 306
LS LP HV+E+ G+ + + + + D++ P +VP ++E S
Sbjct: 225 LSFLPLCHVFEQLFSVMGHITHGYTVNFIEN-LETVTDNMIEVSPTVGYAVPRIWEKYLS 283
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
+ IR+S A T KR+ G L +K+ S ++ +
Sbjct: 284 AV-----------------YIRMSDA-TRLKRLVFGLALKTGKKRASLMMDF------KP 319
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGL 424
+ L + LA +V++K++ +G + ++ G+ P+ D+ F+++IGV + GYG
Sbjct: 320 VPGTLEFFYNLAHFVVFRKLKERMGFDRMRIAYSGAAPISPDVLHFFQSIGVNLVEGYGQ 379
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE + V R G+VG PI TEIKI D G + V+ V +GY+
Sbjct: 380 TEGTGVTCVSRVGKVKFGTVGPPITGTEIKIAD-----------DGEILVKSPSVFKGYY 428
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
+NP AT + + +DGWL +GD+G I G L + R KD IV + G+N+ P
Sbjct: 429 QNPEATAETI-QDGWLYSGDVGEI----------DVDGYLKITDRKKDIIVTAGGKNITP 477
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 604
+E S I VVIG ++ A+I+ D++ V+ A+ + + +L+K I
Sbjct: 478 QYIENKLKFSPYINDAVVIGDQRKFITALIMIDEDNVVKFAQDNKVQFSTYKDLTKSPEI 537
Query: 605 SLL 607
+ L
Sbjct: 538 NKL 540
>gi|218131878|ref|ZP_03460682.1| hypothetical protein BACEGG_03500 [Bacteroides eggerthii DSM 20697]
gi|217986181|gb|EEC52520.1| AMP-binding enzyme [Bacteroides eggerthii DSM 20697]
Length = 593
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 266/594 (44%), Gaps = 74/594 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+K Q + A L +GV+ + + +FS N L D A + + + SSS +
Sbjct: 31 NKFSQTVRQAANALVALGVEEQRNIGIFSQNKPECLFTDFAAFANRLVTIPLYATSSSAQ 90
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ L V ++ +++ +I+ +V D ++ ++ Y
Sbjct: 91 AQYIINDAQIRFLFVGEQFQYDAAFSAFGFCHSLQKLIIF---DRNVVLDPRDKTSIY-Y 146
Query: 174 DEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
DE + LG++ + AR +D+A +YTSGTTG PKGVML H N
Sbjct: 147 DEFLALGKDLPHNNVVEERTARA-------SDEDLANILYTSGTTGEPKGVMLHHFNYRE 199
Query: 233 QIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRY 289
IR ++DI DK +SM LP HV+E+A Y RG+++ + +++ ++
Sbjct: 200 AIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKEI 258
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 259 RPTLMCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN--------------- 303
Query: 350 KQPSYLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLP 404
ID+L +L LHL EK +Y ++ IGI + G ++P
Sbjct: 304 ---------IDYLRVGKTPPLL--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVP 352
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
I F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 353 DEICEFVHSVGINMIVGYGLTESTATVSCFPDKGYEIGSVGTLMPDVEVKI--GENNEIL 410
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
+RG + GY++ P AT A+D+DGW +TGD G + H L
Sbjct: 411 ---------LRGKTITTGYYRKPEATADAIDKDGWFHTGDAGHLKDGH-----------L 450
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
L R KD S G+ V P LE I QI VI ++ A+IVP V
Sbjct: 451 YLTERIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAVIADQRKFVSALIVPVYGFVKDY 510
Query: 585 AKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
AK + + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 511 AKEKGLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 563
>gi|325673718|ref|ZP_08153409.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
gi|325555739|gb|EGD25410.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
Length = 602
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 246/527 (46%), Gaps = 89/527 (16%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+GL GV P +++ L S W + D + A GA++V SS E++ I S +
Sbjct: 64 AKGLVASGVAPGDRVVLLSATRFEWTLFDFAIWAAGAVSVPIYDSSSPEQVQWIVEDSGA 123
Query: 124 VALAVENPEFFNRIAETLCSKAAM-----RFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
V VE + A+ S + R + L + + +A D+V +
Sbjct: 124 VLAIVERAQHAAGFADAGPSLTRVLQIDDRAVEKLIAEGAGLADDVVRQ----------- 172
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
+ + +DD+A+ VYTSGTTG PKG +LTH+N L ++R +
Sbjct: 173 -------------------RIAGVSADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGIL 213
Query: 239 DIVPAE---NGDKFLSMLPPWHVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYM 294
E G++ L+ LP HV RA +F + G + ++ + + +R++P+ +
Sbjct: 214 VASIGEVARPGNRMLTFLPLAHVLARAVSLAMFEAGGTQAHWSNFGTVAEQFERFRPNVI 273
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP V+E ++ S+A + R +FA+ I + + + PS+
Sbjct: 274 LGVPRVFE--------KVRDSAAHTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSF 323
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
L L AR H LA++LV++K+++A+G +SGGG+L + F+
Sbjct: 324 L------LKAR---------HALADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRG 368
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI-VDAETNEVLPAGSKGIV 472
G+ + GYGLTES+ P +G+VG P++ ++I VD E +
Sbjct: 369 AGIPIFEGYGLTESTAAHCVNVPGEQKIGTVGRPMSGNSVRIAVDGE------------I 416
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
++ G V GY++N AT D DGW+ TGD+G + G L+L GR KD
Sbjct: 417 ELAGGVVFGGYWRNEEATADVFD-DGWMRTGDLGELDDD----------GYLILTGRKKD 465
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+V ++G+NV P LE+ ++LI Q VV+G + GA++ D E
Sbjct: 466 LLVTASGKNVSPGPLEDRLRSNALISQAVVVGDGRPFIGALLTLDPE 512
>gi|229817557|ref|ZP_04447839.1| hypothetical protein BIFANG_02820 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785346|gb|EEP21460.1| hypothetical protein BIFANG_02820 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 617
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 258/552 (46%), Gaps = 79/552 (14%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D + + R+ F + Q+++D A+GL G+ + +S+ + W D
Sbjct: 43 DPEGSMVEYKDEEGRWHSFTAREFRQKVIDIAKGLIGWGITKGDAVSIIARTCWEWTALD 102
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKA-AMRFII 151
++A GAI V +S++++ +I+N S+ VALA+ + E++ +A ++R +
Sbjct: 103 MAIMAVGAITVPVYETNSAQQIRNIFNDSK-VALAIAQDDTQRDKIESIKDEAPSLREVF 161
Query: 152 LLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATY 210
++ + D II G + S K F D +A + D +AT
Sbjct: 162 MM---------------EAGAVDAIIAFGTDVSDKEFWDRKNA--------VHGDALATI 198
Query: 211 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERACGYFI 267
VYTSG+TG PKGV L+H N S +P G + L LP HV+ R
Sbjct: 199 VYTSGSTGTPKGVELSHGNFAFLCLSAKQYMPGVVDAPGRRLLLFLPLSHVFARYMSLLS 258
Query: 268 FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
++ + L + ++++ + D + + P +++VP V+E +Y+ ++ S A ++ AR
Sbjct: 259 YAGTLTLGLSSSMKTIVKDFEGFGPTLLLAVPRVFEKVYNAASQRA-GSGVAGKLFARGA 317
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
K E + ++ +PS ++L H + EKLVYKKI
Sbjct: 318 ----------KVAREWSHVQQSGMRPSLRLSLA---------------HAVYEKLVYKKI 352
Query: 387 QSAIGI-SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
++ G ++ ++GG + + F+ IG+++ GYG+TE+ + P N +G++G
Sbjct: 353 RTIFGPNAQCAITGGAPMDAELSHFFNGIGMRLLEGYGMTETCGPVCVSLPEDNRIGTIG 412
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
P+N + I AE E+ + GS V +GY P T+Q + DGWL+TGD+
Sbjct: 413 KPLNGVTVGI--AEDGELC---------ISGSLVCKGYHNQPEVTEQQI-TDGWLHTGDL 460
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G I+ G + + GR KD I+ + G+NV P LE A + S ++ Q +VIG
Sbjct: 461 GSISED----------GFVTITGRKKDLIITAGGKNVSPGILEAAVMTSPVVSQCLVIGD 510
Query: 566 DQRRPGAIIVPD 577
+ A++ D
Sbjct: 511 KKPFVAALVTLD 522
>gi|261211577|ref|ZP_05925865.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
gi|260839532|gb|EEX66158.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
Length = 601
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 156/566 (27%), Positives = 261/566 (46%), Gaps = 71/566 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G+ ++K+++F++N RW VAD L A+ V ++ E+ +I ++++ + V +
Sbjct: 56 GIGVQDKIAIFANNMPRWTVADFATLQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGD 115
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI--VEEIPVFSYDEIIDLGRESRKAFS 188
F+ +R I+ ++ P+I + +D+ + +
Sbjct: 116 QPQFDAALSLFEQCPELRLIV-------AMNPNIELKQADCAMHWDDFV-------TSHQ 161
Query: 189 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK 248
+ A E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D
Sbjct: 162 TQDRAPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTEEDV 221
Query: 249 FLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 307
L LP HV+ERA ++ +G Y V +++D L +P M +VP YE ++S
Sbjct: 222 SLCFLPLSHVFERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSA 281
Query: 308 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 367
I +++ + R+V+ F + C + Q+QPS+L
Sbjct: 282 IHEKVAKAPLIRKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL------------ 320
Query: 368 CAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE
Sbjct: 321 ---LKQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTE 377
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
++ ++ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 378 TTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKL 426
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
T ++ DE+G+L TGD G I + G L + R K+ + S G+ + P
Sbjct: 427 EKETAESFDENGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQV 476
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------ 600
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 477 IEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLE 536
Query: 601 --EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 537 MFEKRVNELQKELAKFEQVKKFKLLP 562
>gi|317474513|ref|ZP_07933787.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|316909194|gb|EFV30874.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 601
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 266/594 (44%), Gaps = 74/594 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+K Q + A L +GV+ + + +FS N L D A + + + SSS +
Sbjct: 39 NKFSQTVRQAANALVALGVEEQRNIGIFSQNKPECLFTDFAAFANRLVTIPLYATSSSAQ 98
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ L V ++ +++ +I+ +V D ++ ++ Y
Sbjct: 99 AQYIINDAQIRFLFVGEQFQYDAAFSAFGFCHSLQKLIIF---DRNVVLDPRDKTSIY-Y 154
Query: 174 DEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
DE + LG++ + AR +D+A +YTSGTTG PKGVML H N
Sbjct: 155 DEFLALGKDLPHNNVVEERTARA-------SDEDLANILYTSGTTGEPKGVMLHHFNYRE 207
Query: 233 QIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRY 289
IR ++DI DK +SM LP HV+E+A Y RG+++ + +++ ++
Sbjct: 208 AIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKEI 266
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 267 RPTLMCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN--------------- 311
Query: 350 KQPSYLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLP 404
ID+L +L LHL EK +Y ++ IGI + G ++P
Sbjct: 312 ---------IDYLRVGKTPPLL--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVP 360
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
I F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 361 DEICEFVHSVGINMIVGYGLTESTATVSCFPDKGYEIGSVGTLMPDVEVKI--GENNEIL 418
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
+RG + GY++ P AT A+D+DGW +TGD G + H L
Sbjct: 419 ---------LRGKTITTGYYRKPEATADAIDKDGWFHTGDAGHLKDGH-----------L 458
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
L R KD S G+ V P LE I QI VI ++ A+IVP V
Sbjct: 459 YLTERIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAVIADQRKFVSALIVPVYGFVKDY 518
Query: 585 AKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
AK + + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 519 AKEKGLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|311742829|ref|ZP_07716637.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
gi|311313509|gb|EFQ83418.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
Length = 584
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 246/561 (43%), Gaps = 77/561 (13%)
Query: 27 FTRNCVDAVATR--IRISRRNHR-FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
T + +D +A R + +SR R + +E+ A+GL G++P ++++L S
Sbjct: 19 LTLDVLDRLADRDAVALSRLTSRGWTDVTIGTFHREVTAVAKGLVAHGIEPGDRVALLSK 78
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
W + D + GA+ V SS ++ I S + E+ R+
Sbjct: 79 TRYEWTLLDYAIWWAGAVTVPIYETSSVAQIAWILADSGAAGCVAESAAHVERVNAASAD 138
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
++R + W +S +V S D++ E+R+A +
Sbjct: 139 APSLRAV---WSLQSDAVAALVAAGRDVSDDDL-----EARRA--------------AVT 176
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYE 260
++ AT VYTSGTTG PKG +LTH NL ++ +I+P ++ L LP HV+
Sbjct: 177 AESPATIVYTSGTTGRPKGCVLTHGNLRAELAGALEILPDLFGQDDATTLLFLPLAHVFA 236
Query: 261 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 319
R G L +TA V +L L ++P ++++VP V+E +++ + +
Sbjct: 237 RIIQVGAIRSGATLGHTADVGDLVGHLGEFRPTFVLAVPRVFEKVFNSASAKAWADGRGP 296
Query: 320 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 379
A I+++ G L AR H + +
Sbjct: 297 VFDRAAATAIAYSRAQVDGGRPGVALR-----------------AR---------HRVFD 330
Query: 380 KLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
+LVY +I+ A+G A +SGG L + FY IGV V GYGLTE++ + P
Sbjct: 331 RLVYGRIRDALGGRAAWAISGGAPLGERLAHFYRGIGVTVLEGYGLTETTAALCVNTPDD 390
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
+G+VG P TE ++ D G ++ RG QV GY+ +P AT Q LDE G
Sbjct: 391 QRIGTVGRPFPRTEARVAD-----------DGELQFRGPQVFSGYWNDPEATAQVLDEHG 439
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
W +TGD+G I G + + GR K+ +V + G+NV P LE+ +++
Sbjct: 440 WFSTGDLGEIDDD----------GFVRITGRKKEILVTAGGKNVAPAVLEDQVRAHAVVS 489
Query: 559 QIVVIGQDQRRPGAIIVPDKE 579
Q VV+G + A++ D+E
Sbjct: 490 QCVVVGDGKPFIAALVTVDRE 510
>gi|167764189|ref|ZP_02436316.1| hypothetical protein BACSTE_02573 [Bacteroides stercoris ATCC
43183]
gi|167698305|gb|EDS14884.1| AMP-binding enzyme [Bacteroides stercoris ATCC 43183]
Length = 601
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 264/594 (44%), Gaps = 74/594 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+K + + A L +G + + + +FS N L D A + + + SSS +
Sbjct: 39 NKFSRTVRQAANALVALGAEEQRNIGIFSQNKPECLFTDFAAFANRLVTIPLYATSSSAQ 98
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ L V ++ ++ +I+ SV D ++ ++ Y
Sbjct: 99 AQYIINDAQIRFLFVGEQFQYDAAFSAFGFCHSLEKLIIF---DRSVVRDPRDKTSIY-Y 154
Query: 174 DEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
DE + LG A + AR D+A +YTSGTTG PKGVML H N
Sbjct: 155 DEFLALGEGLPHNAVVEERTARA-------SDSDLANILYTSGTTGEPKGVMLHHFNYRE 207
Query: 233 QIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 289
IR ++DI DK +SM LP HV+E+A YF RG+++ +++ ++
Sbjct: 208 AIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYFCLHRGVQVCVNLRPADIQTTIKEI 266
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M SVP +E +Y+G+Q++I S R+ + +++ +
Sbjct: 267 RPTLMCSVPRFWEKVYAGVQEKIAQESGLRKAMMLDALKVGKMHN--------------- 311
Query: 350 KQPSYLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLP 404
ID+L A ++ LHL EK +Y ++ IGI + G ++
Sbjct: 312 ---------IDYLRAGKTPPLM--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVS 360
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
I F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 361 DEICEFVHSVGINMVVGYGLTESTATVSCFLDKGYEIGSVGTVMPDLEVKI--GENNEIL 418
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
+RG + GY+K P AT A+D+DGW +TGD G++ +H L
Sbjct: 419 ---------LRGKTITTGYYKKPEATAAAIDKDGWFHTGDAGYLKGNH-----------L 458
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
L R KD S G+ + P LE I QI VI ++ A+IVP V
Sbjct: 459 YLTERIKDLFKTSNGKYISPQALETKLSIDRYIDQIAVIADQRKFVSALIVPVYGLVKNY 518
Query: 585 AKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
AK + + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 519 AKEKGLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLSEPFSM 571
>gi|315633673|ref|ZP_07888963.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
gi|315477715|gb|EFU68457.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
Length = 595
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 262/581 (45%), Gaps = 67/581 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+ +Q+I + L + ++K+ +FS N RW + D G L A+ V + +++++
Sbjct: 38 SEFQQQIDQISLALLANHIDIQDKIGIFSHNMPRWTITDIGALQVRAVTVPIYATNTAKQ 97
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
I N+++ + V + E ++++ E + + I+ + KS++ + E +
Sbjct: 98 AQFIINNADMKIIFVGDQEQYDQVLEIVDECPKLEKIVAM---KSTI--HLHEHAKACHW 152
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ I++ E +A + + +D+ T +YTSGTTG PKGVML + NL HQ
Sbjct: 153 QDFIEMADEQYQA-------ELQQRLDGKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQ 205
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPH 292
+ + + ++ D LS LP H++ERA ++ RG Y N ++ L +P
Sbjct: 206 LNAHDQALKVDDTDVSLSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVRSALTEIRPT 265
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE +Y+ I ++ + R+ + I + + L + QK
Sbjct: 266 LMCAVPRFYEKIYTAILDKVHHAPKLRQRIFHWAIDVGHQHFD--------ALAKGQK-- 315
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
I +L + LA KLV K+++ +G + GG L I LF+
Sbjct: 316 --------------IRFLLKQQYALANKLVLGKLRALLGGRIRMMPCGGAKLESTIGLFF 361
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+IG+ +++GYG+TE++ ++ S+G + E KI E NE+L
Sbjct: 362 HSIGLNIKLGYGMTETTATVSCWDDLHFNANSIGRLMPGAEAKI--GENNEIL------- 412
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG VM+GY+K P T DG+L TGD G G L + R K
Sbjct: 413 --VRGGMVMKGYYKKPQETADTFTADGFLKTGDAGEFDAE----------GNLYITDRIK 460
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ + S G+ + P LE + I QI VI ++ A+IVP + AK+++I
Sbjct: 461 ELMKTSNGKYIAPQVLESKIGKDKFIEQIAVIADAKKYVSALIVPSYAALEEYAKQVNIK 520
Query: 592 HADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ D EL K E+ I+ L EL W F + P
Sbjct: 521 YQDRLELLKNSEILQMLEQRINELQKELAGWEQIKRFTLLP 561
>gi|430760345|ref|YP_007216202.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009969|gb|AGA32721.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 633
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 243/540 (45%), Gaps = 85/540 (15%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R F ++ + + LR + +KP +++++ +NS W V DQ L G + V +
Sbjct: 68 WRSFTWQDFAADVARWQQLLRSLALKPGDRVAMMLENSREWAVFDQAALGLGLVTVPLYT 127
Query: 108 RSSSEELLHIYNHSESVALAVENPE------FFNRIAETLCSKAAMRFIILLWGKKSSVA 161
+E + I S + L + E + ETL + A+R S+A
Sbjct: 128 SDRAENVGFILRDSGARMLLIGGEEQCRALETIRTVLETLDAVVALRDPEGPRPANLSLA 187
Query: 162 ----PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTT 217
PD+ E+ A H + E + A+ VYTSGTT
Sbjct: 188 GRLLPDVAGEV------------------------AHGHTRPEAL-----ASIVYTSGTT 218
Query: 218 GNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMY 276
G PKGVML+H+N L +++ V + D+ LS LP H ER GY+ + G+ + Y
Sbjct: 219 GPPKGVMLSHRNFLFNVQACLRAVQVSSRDRMLSFLPLSHALERTVGYYTPIAAGMTVAY 278
Query: 277 T-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 335
++ L +DL +P +++VP ++E I +++ R+ + FA+T
Sbjct: 279 ARSISQLAEDLLTVRPTILVAVPRIFERAQERILERVEAGPRLRQRL--------FAWT- 329
Query: 336 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA 395
+E F + + + R +L P LL + + G +
Sbjct: 330 LASGWEAFLHEQGRGR------------RRWSDGLLHP--LLDRLVARRVRVRFGGRLRF 375
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
+SGG LP + F+ ++GV + GYGLTE+SPVI+ R N +VG + E+++
Sbjct: 376 AISGGAPLPEAVGRFFLSLGVPIVQGYGLTETSPVISVNRLEDNEPTTVGPALPGVEVRV 435
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
GS+ + R VM GY+ NP AT+Q +D D W +TGD I P
Sbjct: 436 -----------GSQSELLTRSPSVMMGYWNNPDATRQVIDGDHWFHTGDRACIGPR---- 480
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
G + + GR KD +VLS GE V P ++E+A S L+ Q++V+G + GA++V
Sbjct: 481 ------GHITITGRLKDILVLSNGEKVAPADVEQALAGSPLVEQVLVVGDSRPYLGALVV 534
>gi|269960935|ref|ZP_06175305.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
gi|269834375|gb|EEZ88464.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
Length = 602
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 154/578 (26%), Positives = 266/578 (46%), Gaps = 69/578 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
I N V E P+F + + I+ + S ++ E ++D+
Sbjct: 103 IDNADVKVLFVGEQPQF-DAAVSIFDECQQLELIVAM-----SDDIELGEHAFAMTWDDF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
I G +S++ S + + +D+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 157 IAKGDDSQQIELTS-------RLDQAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 210 HDERLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+++ + + A + EG ++PS +
Sbjct: 270 AVPRFYEKIFSAIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAI 414
L + LA+KLV K+++ +G + GG L I F+ AI
Sbjct: 321 ---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + ++KI E NE+L V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------V 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T++ DE G+L TGD G+I + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 525 RVELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|302343061|ref|YP_003807590.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
gi|301639674|gb|ADK84996.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
Length = 616
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 267/568 (47%), Gaps = 73/568 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q + D A G +G++P E +++ DN WL AD G ++ G ++V + +S++E +I
Sbjct: 58 QTVRDVAMGFCALGLRPGEVVAIIGDNCPEWLYADLGCMSAGGVSVGIYTTNSADECAYI 117
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIVEEIPVFSYDE 175
HSE+ VEN E ++ E M+ I+++ G ++ P ++ S+++
Sbjct: 118 LKHSETKIYIVENEEQLDKALEVRDDCTDMKKIVVIDTEGLRNFSDPMVI------SFEQ 171
Query: 176 IIDLGRESRKAFSDSNDARKHYKYE----TIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
+I LG+E +DA+ +E + DD+A +YTSGTTG PKG ML+H+N+L
Sbjct: 172 LIALGKE--------HDAKNPGLFERRLASRKPDDLALLIYTSGTTGPPKGAMLSHENVL 223
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF---IFSRGIELMYTAVRNLKDDLQR 288
+++ D+ +S LP H+ ER F IF + + V + D++
Sbjct: 224 WTSKAMSTAQEILQDDESISFLPLSHIAERNFSTFMPLIFKNTVNFIEN-VDTVTDNVIE 282
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
P +VP ++E S I I++ A T FK+ ++
Sbjct: 283 ISPTVFFAVPRIWEKYASTI-----------------FIKMKDA-TWFKKAVFATAMSIG 324
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 408
+K+ ++ + + A+L + LA V++K++ +G + V+ G+ P+ D
Sbjct: 325 KKRAEARLS------PQGVPALLKLTYALAHFAVFRKLKERLGFERMRVAISGAAPISAD 378
Query: 409 L--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ FY AIG+ ++ YG TE + + + +VG I +IKI AE E+L
Sbjct: 379 VLKFYHAIGIPLRQVYGQTEDTGPTSMHQDDIIEADNVGPAIPGVQIKI--AEDGEIL-- 434
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
V+G V GY+KNP AT + L DGWL++GD+G I G L +
Sbjct: 435 -------VKGRNVFMGYYKNPDATAETL-VDGWLHSGDVGTIDER----------GFLKI 476
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R KD I+ S G+N+ P +E S I V IG ++ A+I D++ V+ A+
Sbjct: 477 TDRKKDLIITSGGKNIAPQNIENQLKASPYINDAVAIGDRRKYMTALIFIDEDNVVKYAQ 536
Query: 587 RLSIVHADASELSKEK-TISLLYGELRK 613
+ L++ K + L+ E+ K
Sbjct: 537 DHKVPFTTYETLTQRKEVVELVQQEIDK 564
>gi|269137982|ref|YP_003294682.1| AMP-binding enzyme-family protein [Edwardsiella tarda EIB202]
gi|387866716|ref|YP_005698185.1| long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
gi|267983642|gb|ACY83471.1| putative AMP-binding enzyme-family protein [Edwardsiella tarda
EIB202]
gi|304558029|gb|ADM40693.1| Long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
Length = 600
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 262/564 (46%), Gaps = 77/564 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+++ A L +GV+ +E++++F+ NS W +AD +L A+ V + +++ + +I
Sbjct: 45 EQVSRLACALLALGVEVQERVAIFAHNSVAWSLADLAILHLRAVTVPVYATNTAAQAAYI 104
Query: 118 YNHSESVALAVE-NPEFFNRIAETLCSKAAMRFIILLWG---KKSSVAPDIVEEIPVFSY 173
N + L V+ ++ +A C R I L G + ++A +
Sbjct: 105 LNDASVRILFVDGQAQYDAALALRECCPQLTRIIALSDGIDLRGCAIACHL--------- 155
Query: 174 DEIIDLGRESRKAFSDSND----ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
AF+ D AR + + DD+ T +YTSGTTG PKGVML +++
Sbjct: 156 -----------HAFAPGGDSASLARLAQRIDAASLDDLFTLIYTSGTTGEPKGVMLDYRS 204
Query: 230 LLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQ 287
L Q+ L+D + D L LP HV+ERA +++ G + +Y NL ++ +Q
Sbjct: 205 LAAQL-YLHDARLNVGEQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQ 263
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
+P M +VP YE ++S +Q ++ + RR + R + + +R L
Sbjct: 264 AVRPTMMCAVPRFYEKIFSAVQAKVAQAPWLRRQLFRWAV-----WCGEQRF-----LRE 313
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 406
+P R++ A +H LA++LV K+++ +G + + G L H
Sbjct: 314 RAARPQ----------GRLMTA----MHRLADRLVLAKLRAILGGRVRFLPAAGAKLDDH 359
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ LF++A+G+ ++ GYG+TE+ ++ GS+G P+ E++I E NE+
Sbjct: 360 VILFFQALGLNIKYGYGMTETCATVSCWEEQDFRFGSIGRPLPGVEVRI--GEENEI--- 414
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
+VRG VM+GYF P T Q DGWL TGD G + G L +
Sbjct: 415 ------QVRGPIVMRGYFNKPQETAQTFTADGWLKTGDAGALDAQ----------GHLFI 458
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R KD + S G+ + P +E R I Q+ VI ++ A+IVP + + A+
Sbjct: 459 TERLKDLMKTSNGKYIAPQLVEGTLARDRFIEQVAVIADARKFVSALIVPCFDSLEEYAR 518
Query: 587 RLSIVHADASELSKEKTISLLYGE 610
+++ + D +L + I L+ +
Sbjct: 519 SINLKYHDRLDLLRHSHIVALFEQ 542
>gi|319652081|ref|ZP_08006201.1| hypothetical protein HMPREF1013_02813 [Bacillus sp. 2_A_57_CT2]
gi|317396229|gb|EFV76947.1| hypothetical protein HMPREF1013_02813 [Bacillus sp. 2_A_57_CT2]
Length = 635
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 272/574 (47%), Gaps = 75/574 (13%)
Query: 40 RISRRNHRFRVFCESKLE---QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
+++ R F ++ E E +++ +F+ GL +G+K E+KL++ DN W++++ +
Sbjct: 19 QVALREKEFGIWNEITYEAFLEKVKNFSLGLASLGLKREDKLAIIGDNRPEWVISELAVQ 78
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
+ G I+V S S EL +I ++ ++ + E+ E +++ E S +R II
Sbjct: 79 SLGGISVGIYQESLSAELSYIIDNCDATIIVAEDQEQVDKLMEIKDSIPKVRTIIYY--- 135
Query: 157 KSSVAPDIVEEIPVFSYDEIIDLGR----ESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
S E +F ++E++ +G+ E FS D +DD+A Y
Sbjct: 136 -DSRGMRSYREDFLFEFEEVLQMGQSCHSEQPDLFSQEVDKGT--------ADDVAILSY 186
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER----ACGYFIF 268
TSGTTGNPKG MLT++NLL ++L DI P + D+++S LP + E+ A G +
Sbjct: 187 TSGTTGNPKGTMLTYRNLLDMAKNLSDIDPLTDKDEYVSFLPLAWIGEQMMTLAMGLY-- 244
Query: 269 SRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G+ + + + +DL+ P M S P +YE + S Q +I S +R +
Sbjct: 245 -NGMTINFPEEPATVLEDLREIGPQVMFSPPRIYEDMVSRFQVRIQDSGWLKRKI----- 298
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
Y K I E +P + A L+ +A+ +++ I+
Sbjct: 299 -----YNWCKPIGEKVAKAHFGNKP--------------VSAGTKALYKIADYVMFSAIR 339
Query: 388 SAIGISKAGVSGGGSLPMHIDLF--YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
G+ K + G P+ D+F + +IGV V+ YG TE + + R L SVG
Sbjct: 340 DHFGLLKIKRAYTGGAPLGPDVFEFFHSIGVNVKSIYGQTEVAGISIVHRDGDIKLDSVG 399
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
PI TE+KI D +G + +R S V +GY+KN +T + + E GWL+TGD
Sbjct: 400 IPIPGTEVKISD-----------EGEILIRSSSVCKGYYKNEKSTIETIQE-GWLHTGDA 447
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
GR + G + +++ R KD I L TGE P +E SS I++ V IG+
Sbjct: 448 ---------GRLDKEGHLYIID-RIKDVIRLDTGEMFSPQFIENKLKFSSFIQEAVAIGK 497
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
D+ A+I D + V A++ I + ++LS
Sbjct: 498 DRPYVVAMINIDMKNVGRWAEKNQISYTTYTDLS 531
>gi|297243423|ref|ZP_06927356.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
AMD]
gi|296888670|gb|EFH27409.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
AMD]
Length = 614
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 246/544 (45%), Gaps = 85/544 (15%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ + + +++ A+G GV P + +S+ + S +W V D +++ GA+ V
Sbjct: 55 WKSYTAEEFRDKVIAVAKGFIARGVMPGDAVSIIAHTSWQWTVLDMAIMSIGALTVPIYE 114
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
SSS ++ HI S+ ++ VE+PE ++ + EE
Sbjct: 115 TSSSLQIQHIVQDSQVCSIFVESPEMLPKVEA------------------------VQEE 150
Query: 168 IPVFSYDEIIDLGR-----ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
P +++ G E KA + DA + + + DIAT VYTSG+TG PKG
Sbjct: 151 CPTLHDVYVMNRGAIDACIEYGKAVT---DAEFYERVHAVNGSDIATIVYTSGSTGEPKG 207
Query: 223 VMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA- 278
+ LTH N + +S +P ++ + L LP HV+ R F F+ I L T+
Sbjct: 208 IELTHSNFVFIAKSGVISMPDIALKDSPRLLLFLPLAHVFARFMQLFCFAGNITLGLTSN 267
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
++ + D Q ++P +++ VP ++E +Y +AA + R + FAY A K
Sbjct: 268 LKTVLSDFQTFKPTFILGVPRIFEKIY----------NAASQKAGRGVKGFIFAY-ASKV 316
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GV 397
E +R Q+ S ++ +L H + +KLVY + G S + +
Sbjct: 317 ARE---WSRAQQSSS------------MVPPMLALSHSICKKLVYAPLLHVFGGSVSYAI 361
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGG L + I F+ IG+ + GYG+TE+ T +G+VG P+ + I D
Sbjct: 362 SGGAPLDLSIAHFFNGIGLPLLEGYGMTETCAPSMVNPTTGYRIGTVGLPVKGVSVAIAD 421
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G + ++ V +GY NP TKQ + +GWL+TGD G S
Sbjct: 422 -----------DGELCIKSPAVCKGYHNNPELTKQQI-VNGWLHTGDFG----------S 459
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G + + GR KD I+ + G+N+ P LE + + S +I Q VVIG + AII D
Sbjct: 460 LDDDGFVRITGRKKDLIITAGGKNLSPNALEASLMSSPIISQAVVIGDRKPFVSAIIALD 519
Query: 578 KEEV 581
EV
Sbjct: 520 LSEV 523
>gi|407775610|ref|ZP_11122903.1| AMP-dependent synthetase/ligase [Thalassospira profundimaris
WP0211]
gi|407281287|gb|EKF06850.1| AMP-dependent synthetase/ligase [Thalassospira profundimaris
WP0211]
Length = 606
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 240/524 (45%), Gaps = 71/524 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A L IGV+P +++ L S+N W +AD ++ GA+ V + ++ + LH S
Sbjct: 55 LARALYDIGVRPGDRVLLVSENRTEWGIADLAIMCVGAMTVPAYTTNTERDHLHAIEDSG 114
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILL--WGKKSSVAPDIVEEIPVFSYDEIIDLG 180
+ + + R I++ WG+ V +I + +D++I G
Sbjct: 115 AAIAIISTKKLAQPFLHAALDSGRCRHAIMMEEWGQS------FVGDITISRWDDLIAKG 168
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
R + DA TI DD+A +YTSGT G+PKGVML+H +L +DI
Sbjct: 169 R----GLTHDVDAW----ISTIKRDDLACLIYTSGTGGSPKGVMLSHGAILSNCMGAFDI 220
Query: 241 VPAENGDK--FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMIS 296
+ D+ FLS LP H YE G YF S ++ Y + L +L +P M +
Sbjct: 221 IETLGIDEEIFLSFLPLSHSYEHTAGLYFPISIDAQIYYAEGLDKLAANLAEVRPTIMTA 280
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP +YE LY + + + ++ + +R+ ++ YEG L +K ++
Sbjct: 281 VPRLYEMLYQRMSRMVEKEGGIKQKLFNLTLRLG------RKNYEGERLNLLEKLQNFA- 333
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 415
E L+ +K++ G KA VSGGG L + + + + G
Sbjct: 334 ---------------------CELLLRRKLRQRFGGRIKAMVSGGGPLNYELGVLFVSCG 372
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+++ GYG TE +PV++ R N L +VG P+ E+KI AE E+L +R
Sbjct: 373 IRILQGYGQTEFAPVVSCNRAENNKLRTVGPPMVGAEVKI--AEDGEIL---------LR 421
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G +M+GY+ P T A+ DGWL+TGDIG G L++ R KD IV
Sbjct: 422 GESMMKGYWNLPDVTAAAI-IDGWLHTGDIGKFDEQ----------GSLMITDRKKDIIV 470
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
S G+N+ P +E + I Q +V G D+ A++ PD++
Sbjct: 471 NSGGDNISPQRIEGLMTLETEISQAMVYGDDKPYLVAVVWPDED 514
>gi|227495094|ref|ZP_03925410.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
gi|226831546|gb|EEH63929.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
Length = 631
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 164/567 (28%), Positives = 261/567 (46%), Gaps = 102/567 (17%)
Query: 29 RNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRW 88
R+ + A T++ + RN + C LE E+ A GL +G++P + +++ S W
Sbjct: 57 RSPIIARKTQMGANWRN----ISCADFLE-EVNVVARGLIGLGLQPGDSIAIMSHTRYEW 111
Query: 89 LVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMR 148
+ D + G + V SS +++ +I N S+ V L V AET+ M
Sbjct: 112 TLLDVAGWSAGLVVVPIYETSSVDQIGYILNDSQ-VKLVV---------AETMV----MS 157
Query: 149 FIILLWGKKSSVAPDIVEEIPVFSYDE--IIDLGRESRKAFSDSNDARKHYKYETIGSDD 206
+++ + + + + S D I+ + S+ + D R+ + D
Sbjct: 158 QLVMAAREHAPAG------LKILSLDNSAILKITAASKDVPQSAVDERQ----ANLSITD 207
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS------------MLP 254
+AT VYTSGTTG PKGV LTH N + A+NG K+++ LP
Sbjct: 208 LATVVYTSGTTGKPKGVELTHGNF---------TILAQNGHKWMAEIANHRRSRLLLFLP 258
Query: 255 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
HVY R F + G L +T +NL DL+ ++P Y+++VP V E +Y+ ++
Sbjct: 259 LAHVYARFLEVFQLTGGGVLAHTPDTKNLLHDLESFRPSYLLAVPRVLEKIYNSAEQS-- 316
Query: 314 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 373
+S + R + + AY+ EG T +
Sbjct: 317 AASGMKLRTFRWAAKTAIAYSRALDTAEGPSKTLRAQ----------------------- 353
Query: 374 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 432
H +A+ LVY+K++ +G K +SGGG L + FY +GV V GYGLTE++ +A
Sbjct: 354 -HQMADALVYRKLKDLLGGHCKYVISGGGPLGERLGHFYRGLGVTVLEGYGLTETTAPLA 412
Query: 433 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 492
P + +G+VG PI+ +KI D T E+L V+G V +GY NP AT +
Sbjct: 413 VNTPRLSKIGTVGPPISTVGVKISD--TGEIL---------VKGPSVFRGYRNNPEATAE 461
Query: 493 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 552
A E+GW TGD+G S G L + GRAK+ +V + G+NV P LE++
Sbjct: 462 AF-ENGWFKTGDLG----------SLDRDGYLRITGRAKELLVTAGGKNVSPAALEDSLR 510
Query: 553 RSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L+ Q+VV+G + A++ D E
Sbjct: 511 AHPLVSQVVVVGDKRPFIAALVTLDAE 537
>gi|430760195|ref|YP_007216052.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009819|gb|AGA32571.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 625
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 240/542 (44%), Gaps = 69/542 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ E+ + L+ G++P +++++ N W+ DQ L G + V + +
Sbjct: 68 AEMACEVGRWQMALKREGLEPGDRVAMMLRNCREWITFDQAALGLGLVTVPLYTDDRPDN 127
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I + L +E+ + R+ + I+ L G F
Sbjct: 128 VAYIVEQAGVKLLLLEDRTQWQRLLPVRDRLQTVTTIVSLRG---------------FDD 172
Query: 174 DEIIDLGRESRKA---FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 230
D + R + A F D + D +AT VYTSGTTG PKGVML+H+ L
Sbjct: 173 DSVPGDPRLTAAADWLFGLEGDLVTRLEE----PDSLATIVYTSGTTGRPKGVMLSHRAL 228
Query: 231 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQR 288
L + P D FLS LP H ER G F+ G E+++ ++ L +DL+
Sbjct: 229 LFNAHAASRCAPLGGEDVFLSFLPLSHTLERTAGCFLPMVVGAEVVFARSIPQLAEDLRV 288
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
QP ++SVP +YE++Y+ IQ + SA R++ R + +A F+ I + +
Sbjct: 289 VQPTVLVSVPRIYESVYAKIQAGLKQKSALARLLFRTTVDAGWAR--FEHIQQRAGWSPR 346
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHID 408
L L+ +K ++ G + V GG LP I
Sbjct: 347 LLLWPLLGRLV----------------------AHKVLERLGGRLEYAVCGGAPLPPSIA 384
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+ +G+ V GYGLTE+SPV+ RP N+ S+G P+ EI+I E +E+L
Sbjct: 385 RFFIGLGLPVYHGYGLTEASPVVTVNRPDENLPASIGKPLPGVEIRI--GEQDELL---- 438
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
R VM GY+++ AT +D DGWL+TGD I G + + G
Sbjct: 439 -----TRSPSVMLGYWRDDEATAATIDPDGWLHTGDKARIDAQ----------GFVFITG 483
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R KD IVL GE V P ++E + L Q++VIG+ + A++V D A+ L
Sbjct: 484 RIKDIIVLGNGEKVPPADMEMSIQLDPLFDQVLVIGEGRAFLSALVVLDAAAWREYAREL 543
Query: 589 SI 590
+
Sbjct: 544 DV 545
>gi|288941571|ref|YP_003443811.1| AMP-dependent synthetase and ligase [Allochromatium vinosum DSM
180]
gi|288896943|gb|ADC62779.1| AMP-dependent synthetase and ligase [Allochromatium vinosum DSM
180]
Length = 605
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 248/538 (46%), Gaps = 62/538 (11%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
R R+ +R ++ + + + L ++ +++++ N W++ DQ A G
Sbjct: 35 RYFERDQGWRALTWREMGDSVARWRQALAGESLETGDRVAMLLRNGPEWIMFDQAAFALG 94
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
+ V + ++ +I + + L +++ + R+AE + + +I+L ++
Sbjct: 95 LVTVPLYTDDRADNAAYILDDAAVKVLLIQDAGRWKRLAEAIGDSPWPQRVIILESSPAA 154
Query: 160 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 219
A + + D + R + DS + E D+AT VYTSGTTG
Sbjct: 155 HA--------LAACDSRV---RVAESWLPDSAPSLTQRNGE---PRDLATIVYTSGTTGR 200
Query: 220 PKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT- 277
PKGVML+H N+L ++ +V D FLS LP H+ ER GY++ G + Y
Sbjct: 201 PKGVMLSHHNILSNAHAVLTLVDVYGEDLFLSFLPLSHMLERTGGYYLPMMAGSTVAYAR 260
Query: 278 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 337
+V L +DL+ +P +I+VP V+E +Y I Q+ T A R L ++ A
Sbjct: 261 SVAQLAEDLKAIRPTIIIAVPRVFERVYGRIADQLQTRPAP----VRWLFHLAVAVGWRD 316
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV 397
++E R+ + K+ +Q G + V
Sbjct: 317 FLHEQGRAGRHPSLLLRPLL--------------------KRKVGDPVLQKLGGRLRVAV 356
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGG +LP + + +G+ + GYGLTE+SPV++ N+ SVG PI +++I D
Sbjct: 357 SGGAALPTDVARTFIGLGLPLIQGYGLTETSPVVSFNPLDDNIPESVGVPIRGIQVRIGD 416
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
+E+L ++G VMQGY+ N +AT L+ DGWL+TGD ++
Sbjct: 417 --NDELL---------IKGENVMQGYWNNHAATAGVLNHDGWLHTGD-----------QA 454
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
R G + + GR KD +VLS GE V P +LE A L Q++V+G+ Q GA++V
Sbjct: 455 RIQGDHIFITGRIKDILVLSNGEKVPPADLEMAIGLDPLFDQVMVVGEGQSYLGALLV 512
>gi|425063621|ref|ZP_18466746.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
gi|404382175|gb|EJZ78636.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
Length = 606
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 264/561 (47%), Gaps = 62/561 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +Q++ F+ L + ++K+++F+ N RW +AD G + A+ V + S+++++
Sbjct: 40 QFQQDLDTFSYALLANHIGIQDKIAIFAHNMPRWTIADIGTMQVRAVVVPIYATSAAKQV 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N+++ L V + E +N E + + ++ I+ + K ++ D+ +
Sbjct: 100 EYILNNADVKILFVGDQEEYNCTLEIIDACPQIQKIVAM---KDNL--DLKNHPKACDWQ 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ G ++ +K D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 155 TFLLEGSPLQQTALQERLEQKQLT-------DLFTLIYTSGTTGEPKGVMLDYANLAHQL 207
Query: 235 RS---LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 290
++ + + D LS LP H++ERA ++ RG Y N +++ L +
Sbjct: 208 KAHDEAFTTLNVSQYDSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIR 267
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE +Y+ + ++ + RR++ I + F+ I ++K
Sbjct: 268 PTLMCAVPRFYEKIYTAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SKK 317
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P I +L + LA+KLV K++ +G + GG L +I L
Sbjct: 318 KP--------------IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGL 363
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ +IG+ V++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 364 FFHSIGINVKLGYGMTETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL----- 416
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T + EDG+L TGD G P G L + R
Sbjct: 417 ----VRGGMVMRGYYKKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDR 462
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E + I QI VI ++ A+IVP + AK+L+
Sbjct: 463 IKELMKTSNGKYIAPQYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLN 522
Query: 590 IVHADASELSKEKTISLLYGE 610
I + D EL K I ++ +
Sbjct: 523 IKYHDRLELIKHSDILQMFEQ 543
>gi|256378500|ref|YP_003102160.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
gi|255922803|gb|ACU38314.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
Length = 597
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 149/548 (27%), Positives = 251/548 (45%), Gaps = 76/548 (13%)
Query: 38 RIRISRR-NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
R+ ++R+ + +R ++ E+ A+GL GV P +K+++ S W V D +
Sbjct: 32 RVLLARQVDGAWRDVTAARFLAEVRSAAKGLIAAGVGPRDKVAIMSRTRYEWTVLDYAVW 91
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
GA++V SS+E++ I S +VA+ VE + +A+ A++ + W
Sbjct: 92 GAGAVSVPLYETSSAEQVEWILTDSGAVAIVVETEAHRSLVAKVRPGLPALKQV---WTI 148
Query: 157 KSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGT 216
A D ++ DE++D + +G+D++AT VYTSGT
Sbjct: 149 NDG-ALDQLDAGGASVGDELLD------------------ERIAGLGADELATIVYTSGT 189
Query: 217 TGNPKGVMLTHKNLLHQI-RSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIE 273
TG PKG ++TH+NLL + ++ + P +N L LP HV R + ++
Sbjct: 190 TGRPKGCVITHRNLLAECGNTIARLQPLFHDNASSLL-FLPLAHVLGRVVQLCSLAAPVK 248
Query: 274 LMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
L + + +++L L +QP ++ +VP V+E +Y+ + Q + ++ V + S A
Sbjct: 249 LGHVSDLKDLPAALAAFQPTFLPAVPRVFEKVYNSARAQAV--AGGKQKVFDLAVDTSIA 306
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
Y+ G L K H L ++LVY K+++ +G
Sbjct: 307 YSRALETPSGPGLALKLK------------------------HKLFDRLVYGKLRAVLGG 342
Query: 393 SKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
A +SGG L + FY +G V GYGL ESS P +G+VG P+ +
Sbjct: 343 RAAYALSGGAPLGERLGHFYRGLGFLVLEGYGLAESSAATTTNPPDVQKIGTVGLPLPGS 402
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
++I D G V+++G + GY+ NP AT LD DGW +TGD+G +
Sbjct: 403 SVRIAD-----------DGEVQLKGEHIFTGYWNNPGATAAVLDADGWFSTGDLGSLDEE 451
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
G L + GR K+ IV S G+NV P +E+ +L+ + +V+G +
Sbjct: 452 ----------GYLRITGRKKEIIVTSGGKNVAPAVIEDRIRAHALVAECMVVGDAKPFIA 501
Query: 572 AIIVPDKE 579
A+I D+E
Sbjct: 502 ALITLDEE 509
>gi|152967185|ref|YP_001362969.1| AMP-dependent synthetase and ligase [Kineococcus radiotolerans
SRS30216]
gi|151361702|gb|ABS04705.1| AMP-dependent synthetase and ligase [Kineococcus radiotolerans
SRS30216]
Length = 599
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 170/612 (27%), Positives = 269/612 (43%), Gaps = 87/612 (14%)
Query: 38 RIRISRR--NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGM 95
R+ +SR+ + ++R + E+ A+GL G+ P +++ + S W + D
Sbjct: 32 RVSVSRKGADGQWRDTTAEEFLAEVTAIAKGLLAAGIAPGDRIGIMGRTSYEWTLFDVAG 91
Query: 96 LATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG 155
GA+ V SS E++ I S VA VE E R+A +R + W
Sbjct: 92 WFAGAVTVPVYETSSPEQIEWILADSGCVACVVETTENAGRVATVRERLPRLRDV---WT 148
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
+S VEE+ R A D DA G DD T +YTSG
Sbjct: 149 LESGA----VEEL---------------RTAGRDIADAEVERSRTLAGPDDPMTIIYTSG 189
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERACGYFIFSRGI 272
TTG PKG +LTH N L R+ +P G L +P HV+ R I
Sbjct: 190 TTGRPKGCLLTHGNFLDLARNADAAIPEVLRRPGAATLLFIPLAHVFARFIQALCLVSRI 249
Query: 273 ELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ +TA ++L DL ++P ++++VP V++ +Y+G +++ +++ +V AR + +
Sbjct: 250 RMGHTADAKDLLGDLAGFRPTFILAVPRVFQKVYNGAEQR---AASGGKVKARIFEQAAR 306
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
A+ R + + PS + L H L ++LVY K+++ +G
Sbjct: 307 TADAWSR-------SLDTGGPSLPLKL---------------RHRLFDRLVYSKLRALMG 344
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
+ VSGG + H+ F+ G+ V GYGLTE++ + RP+ +G+VG P+
Sbjct: 345 GRVEYAVSGGAPMGEHLAHFFRGTGLVVLEGYGLTETAAPLTVTRPSRLRIGTVGPPLPG 404
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
T+I I AE EVL RG V + Y P T++A DGW TGD+G +
Sbjct: 405 TDITI--AEDGEVL---------ARGVGVFREYLGRPRETEEAF-LDGWFRTGDLGSLDE 452
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
G L + GR K+ IV + G+NV P LE+ LI Q VV+G +
Sbjct: 453 D----------GNLRITGRKKEIIVTANGKNVVPANLEDRLRAHPLISQAVVVGDGRHFV 502
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADAS-ELSKEKTISLLYGELRKWTSKCSFQIG------ 623
G ++ D+E A H A +L +T + + EL++ K + +
Sbjct: 503 GCLLTLDEE----ALPSWGANHGKAGLDLPTARTDADVLAELQRAVDKANASVSRAESIR 558
Query: 624 PIHVVDEPFTVN 635
V+ E FTV
Sbjct: 559 RFRVLTEDFTVE 570
>gi|262277937|ref|ZP_06055730.1| AMP-dependent synthetase and ligase [alpha proteobacterium HIMB114]
gi|262225040|gb|EEY75499.1| AMP-dependent synthetase and ligase [alpha proteobacterium HIMB114]
Length = 563
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 261/542 (48%), Gaps = 84/542 (15%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
+N + S + +++ F+ L + GVK +++ L S+ W+++D +LA AI V
Sbjct: 31 KNKKVDALKWSDVSKKVEIFSTFLNIQGVKKGDRVMLVSEGRPEWMISDLSILANDAITV 90
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD 163
+ + ++ + ++ + L V + + I + CS+ +F ++
Sbjct: 91 PNYTTYTQKDFEFVLKDADPIGLIVSSEKLLKTILDA-CSQINFQFKFII---------- 139
Query: 164 IVEEIPVFSYDEIIDLGRESRKAFSD-SNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
S+D+I E+ + F + N+ K+ + +++ +D A +YTSGT GNPKG
Sbjct: 140 --------SFDKI-----ENVQNFHELKNNLNKNIRCKSL-RNDPACIIYTSGTQGNPKG 185
Query: 223 VMLTHKNLLHQI---RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 279
V+L+H ++ ++L D + +N +F++ LP H YE + + G ++ Y+ V
Sbjct: 186 VVLSHGGIISNCEDSKNLVDELQVKNP-RFITWLPLSHSYEHTVQFVQIALGAKIFYSPV 244
Query: 280 -RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR-ISFAYTAFK 337
L D+++ +PH M +VP Y LY+ + + SS+ ++ R ++ + FK
Sbjct: 245 IEKLLDNIKIAKPHVMTAVPRFYNNLYNKMMSGVLKSSSFKK---RLFLKTVELGSKDFK 301
Query: 338 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV 397
K+ S + I++L L++L K V I++ G KA V
Sbjct: 302 -----------NKKLSIIEKFINYL-----------LNILVRKKV---IKNFGGNLKAFV 336
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGGG L ++ LF ++G+K GYGLTE+SPV++ CN P+N +I+ V
Sbjct: 337 SGGGPLDQNVGLFLNSLGLKTLQGYGLTETSPVVS-----CN-------PVNKIKIETVG 384
Query: 458 A-ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 516
A +N + G + V+G +M GY+KN AT Q L ++GWL+TGD+G I
Sbjct: 385 AIFSNNKVKIAEDGEILVKGENIMLGYWKNEDATNQVL-KNGWLHTGDVGEIDDE----- 438
Query: 517 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
G L + R KD IV G+N+ P ++E I Q V G +Q+ ++V
Sbjct: 439 -----GYLKITDRKKDIIVTLGGDNISPSKIENLLCLHDEIEQAYVHGDNQKYLSCLLVL 493
Query: 577 DK 578
+K
Sbjct: 494 NK 495
>gi|301310729|ref|ZP_07216668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|423336979|ref|ZP_17314726.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
gi|300832303|gb|EFK62934.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|409239161|gb|EKN31947.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
Length = 633
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 153/588 (26%), Positives = 276/588 (46%), Gaps = 68/588 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ RF +++ + + GL +GV+ + ++L S+ W++ + M GA N
Sbjct: 26 KTGKRFEPTTYAEVRDLVYEEGAGLISLGVRKGDNMALLSEGRNAWIIGELAMFYAGATN 85
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I A+R II+L +
Sbjct: 86 VPLSIKLEEANDLLFRLVHADVKYIMVSGQQ-LKKIRAIKDQLPAVRKIIVLDEQAEYQD 144
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
++ S EI +G K + + + +++G+DD AT YTSGTT +P
Sbjct: 145 REM-------SLSEIRRMG----KVYLGIHPIEEFLAIGQSLGNDDYATITYTSGTTADP 193
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IEL 274
KGV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 KGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATVQV 253
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ +++ ++P+ ++SVP + + I++ I + +RI +
Sbjct: 254 GRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQGIRARGKNAVRLFNLALRIGY 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y EG + +L PL L +KL++ K++ G
Sbjct: 314 IYNGDSDEEEG----------------------KGFRVLLKPLVRLFDKLLFAKVRENFG 351
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K + GG L + FY A+G+ + GYGL+E++P+I+ P + GS G +
Sbjct: 352 GELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATPIISTNGPRRHTFGSSGVLVRP 411
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D + N VLP G KG + +RG VM GY+KNP++T + E GWL TGD+G++
Sbjct: 412 LDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPASTADTVKE-GWLYTGDMGYMR- 468
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRR 569
G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 469 ----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPY 518
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTISLLYGELRKW 614
A++VP+KE + R + H + S+ +E+ I ++ ++ ++
Sbjct: 519 TTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIRIIQRQIDRF 561
>gi|453382146|dbj|GAC83353.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 612
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 159/593 (26%), Positives = 270/593 (45%), Gaps = 77/593 (12%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
DAVA R R S+ + A GL +G+ + + + N + + D
Sbjct: 33 DAVAIRTVAGTRQ-----ITWSEYGTRVEAIAGGLAALGISRGDTIGIMLTNRPEFHLVD 87
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
L GAI + SS +++ +++ ++ + + E F I + + + IIL
Sbjct: 88 TAALHLGAIPFSIYNTSSPDQVEYLFGNAGNKVVITEQ-AFLPVIT---SAASGIEKIIL 143
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
+ G + S +E+ L + F+ S ++ + DD+AT +Y
Sbjct: 144 VDGDTDAT----------LSLEEVERLASPAGFDFAAS--------WQAVEPDDLATLIY 185
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRG 271
TSGTTG PKGV +TH+N++ ++ SL DIV A D+ +S LP H+ +R + RG
Sbjct: 186 TSGTTGPPKGVEITHRNIIAELASLADIVDAGFDDRAISYLPAAHIADRVSSHAANMVRG 245
Query: 272 IELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
I+L R + L +P + VP V++ + +GI+ R+
Sbjct: 246 IQLTTVPDPREIAAALPEVRPTFFFGVPRVWQKIRAGIEA-----------------RLG 288
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
+ K+ G+ L K +A R + + H LA++L+ K+++A+
Sbjct: 289 EETSPVKKALAGWALGMGTKAADARLA------GRELGVLDRIGHELADRLILHKVRAAL 342
Query: 391 GISKAGVSGGGS--LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 448
G+ + +G G+ +P+ + ++ +G+ V +G++E++ V P +G+VG PI
Sbjct: 343 GLDEVDFAGSGAAAIPLEVLKYFLGLGLPVLEVWGMSETTGVSTMTTPDDLKIGTVGKPI 402
Query: 449 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 508
E+K+ AE E+L VRG VM GY K P T + +D DGWL TGDI I
Sbjct: 403 RGIEVKL--AEDGELL---------VRGPVVMNGYRKQPDKTAETIDPDGWLATGDIATI 451
Query: 509 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQ 567
G + + R K+ I+ +G+N+ P +E SSLI Q+V IG +
Sbjct: 452 ----------DADGHVTIVDRKKELIINESGKNMSPTNIENTMKAVSSLIAQVVAIGDGE 501
Query: 568 RRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWTSKCS 619
A++V D E V AKRL++ +ELS I + G +R+ ++ S
Sbjct: 502 PYVSALVVLDPEAVEAYAKRLNLGQGGFAELSSHPAIVEEITGAIREGNTRLS 554
>gi|426256226|ref|XP_004021742.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Ovis
aries]
Length = 699
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 247/549 (44%), Gaps = 82/549 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG + V +E + +I N +E + V+ PE
Sbjct: 147 PDKFIGIFAQNRPEWVIIEQGCFTYSMVIVPLYDTLGTEAITYIINKAELSLVFVDKPEK 206
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
N + E + +K ++ I+L+ S D++E + + S + DLGR +R+
Sbjct: 207 ANLLLEGVENKLIPCLKTIVLM----DSYGSDLLERGKKCGVEIISMKAMEDLGRANRQ- 261
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----V 241
K + +D+A +TSGTTGNPKG M+TH+N++ + + +
Sbjct: 262 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKMTENTFI 310
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 311 PTSD-DTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPR 369
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 370 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRN 409
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGV 416
+ LW +KL++ KIQS++G K + G+ P+ + A+G
Sbjct: 410 NSLW---------------DKLIFHKIQSSLG-GKVRLMITGAAPVSATVLTFLRAALGC 453
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYG TE + P G VG P+ + IK+VD E L A +G V V+G
Sbjct: 454 QFYEGYGQTECTAGCCLTIPGDWTAGHVGAPMPCSIIKLVDVEEMNYLAAKGEGEVCVKG 513
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
S V QGY K+P T +ALD+DGWL+TGDIG P+ G L + R K L
Sbjct: 514 SNVFQGYLKDPVKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKL 563
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
+ GE + P ++E RS I Q+ V G+ Q AI+VPD E + A++ IV
Sbjct: 564 AQGEYIAPEKIENIYQRSEPIAQVFVHGESLQAFLIAIVVPDVETLGAWAQKRGIV-GSF 622
Query: 596 SELSKEKTI 604
EL + K +
Sbjct: 623 EELCRNKDV 631
>gi|340794017|ref|YP_004759480.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340533927|gb|AEK36407.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 607
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 256/554 (46%), Gaps = 70/554 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+E+ D A+GL GV +++ L SD W + D ++A GA++V SS+ + I
Sbjct: 53 REVYDVAKGLIANGVGQGDRVVLMSDTRYEWNLFDFAIMAAGAVSVPVYPSSSTSQCEWI 112
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
S +V E R+ + + A L + S+ VE + D I
Sbjct: 113 VEDSGAVIGIAEKSGHATRLNTFVHATAPAEGAHL--DRVLSITDGAVETLTAEGKD-IS 169
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
D E+R A + S+D +A+ VYTSGTTG PKG L H N L + R+L
Sbjct: 170 DEEVEARIAATKSSD--------------VASLVYTSGTTGRPKGCRLLHSNWLGEARAL 215
Query: 238 YDIVP----AENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPH 292
P A G++ L+ LP HV RA + ++ + L + R QPH
Sbjct: 216 L-THPIGGIAVEGNRALTFLPLAHVLSRAVSLASTLGGATQSHWSEMATLVPEFARAQPH 274
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
++ VP V+E +++G++ + + + + Y+ +G P
Sbjct: 275 LILGVPRVFEKVHAGVKSKAVDGGGIGAKIFPLAEKTAVEYSKALDTKQG---------P 325
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
A+L + +KLVY K+++A+G S + +SGG +L + F+
Sbjct: 326 G---------------ALLKAKRAVFDKLVYGKVRAAMGGSLQYCISGGSALNSELMHFF 370
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
IGV++ GYG+TE++ IA N++G+VG P+ ++I AE E+L
Sbjct: 371 RGIGVRIYEGYGMTETTAAIAVNFEPDNIIGTVGKPVGGNTVRI--AEDGEIL------- 421
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
++G+ V GY+ N ATK D DG+L +GD+G + P G L + GR K
Sbjct: 422 --MKGTVVFDGYWNNEEATKDTFDGDGFLRSGDLGALLPT----------GHLKITGRKK 469
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ IV + G+NV P LE+ + LI Q +V+G DQ+ G++I D++ + KR ++
Sbjct: 470 EIIVTAGGKNVSPGPLEDILRSAPLISQAMVVGDDQKFIGSLITLDEDALPAWKKRNNVP 529
Query: 592 -HADASELSKEKTI 604
H EL+K +
Sbjct: 530 EHTGVLELAKNPVL 543
>gi|415708685|ref|ZP_11462699.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 6420LIT]
gi|415709219|ref|ZP_11462952.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 6420B]
gi|388054584|gb|EIK77522.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 6420LIT]
gi|388056633|gb|EIK79496.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 6420B]
Length = 603
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 246/544 (45%), Gaps = 85/544 (15%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ + + +++ A+G GV P + +S+ + S +W V D +++ GA+ V
Sbjct: 44 WKSYTAEEFRDKVIAVAKGFIARGVMPGDAVSIIAHTSWQWTVLDMAIMSIGALTVPIYE 103
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
SSS ++ HI S+ ++ VE+PE ++ + EE
Sbjct: 104 TSSSLQIQHIVQDSQVCSIFVESPEMLPKVEA------------------------VQEE 139
Query: 168 IPVFSYDEIIDLGR-----ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
P +++ G E KA + DA + + + DIAT VYTSG+TG PKG
Sbjct: 140 CPTLHDVYVMNRGAIDACIEYGKAVT---DAEFYERVHAVNGSDIATIVYTSGSTGEPKG 196
Query: 223 VMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA- 278
+ LTH N + +S +P ++ + L LP HV+ R F F+ I L T+
Sbjct: 197 IELTHSNFVFIAKSGVISMPDIALKDSPRLLLFLPLAHVFARFMQLFCFAGNITLGLTSN 256
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
++ + D Q ++P +++ VP ++E +Y +AA + R + FAY A K
Sbjct: 257 LKTVLSDFQTFKPTFILGVPRIFEKIY----------NAASQKAGRGVKGFIFAY-ASKV 305
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GV 397
E +R Q+ S ++ +L H + +KLVY + G S + +
Sbjct: 306 ARE---WSRAQQSSS------------MVPPMLALSHSICKKLVYAPLLHVFGGSVSYAI 350
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGG L + I F+ IG+ + GYG+TE+ T +G+VG P+ + I D
Sbjct: 351 SGGAPLDLSIAHFFNGIGLPLLEGYGMTETCAPSMVNPTTGYRIGTVGLPVKGVSVAIAD 410
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G + ++ V +GY NP TKQ + +GWL+TGD G S
Sbjct: 411 -----------DGELCIKSPAVCKGYHNNPELTKQQI-VNGWLHTGDFG----------S 448
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G + + GR KD I+ + G+N+ P LE + + S +I Q VVIG + AII D
Sbjct: 449 LDDDGFVRITGRKKDLIITAGGKNLSPNVLEASLMSSPIISQAVVIGDRKPFVSAIIALD 508
Query: 578 KEEV 581
EV
Sbjct: 509 LSEV 512
>gi|329964579|ref|ZP_08301633.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
gi|328524979|gb|EGF52031.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
Length = 645
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 161/589 (27%), Positives = 260/589 (44%), Gaps = 64/589 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+K Q + A L +GV+ +E + +FS N L D G A + + + SS +
Sbjct: 83 NKFSQTVRQVANSLLSLGVEVQENIGVFSQNKPECLYMDFGSYADRVVTIPLYATSSPSQ 142
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I N ++ L V ++ +++ II+ K + D+ +
Sbjct: 143 VQYIINDAQIRYLFVGEQFQYDAAFCVFGLCKSLQQIIIFDRKVQRDSRDLTS----IYF 198
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
DE + G ++D + R + S DIA +YTSGTTG PKGVML H N +
Sbjct: 199 DEFLKQGEGL--PYNDEVERRT----AEVSSADIANILYTSGTTGEPKGVMLMHYNYMEA 252
Query: 234 IRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQP 291
R+ +P+ + D +S LP HV+ER Y RG ++ ++++ ++ +P
Sbjct: 253 FRTHEIRIPSLTDQDVSMSFLPLTHVFERGWTYVCLQRGAQVCVNLRPQDIQTTIKEIRP 312
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M SVP +E +Y G+Q++I + ++ + I++ A+ R K
Sbjct: 313 TVMCSVPRFWEKVYQGVQERIEQETGLKKAMMLDAIKVGRAH--------NLDYLRLGKT 364
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDL 409
P ++ L + EK VY ++ IGI + G ++ +
Sbjct: 365 PPLMLHL---------------KYKFYEKTVYALLKKTIGIENGTFFPTAGAAVSNEVCE 409
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F ++G+ + VGYGLTES+ ++ P VLGSVG + E+KI E NEVL
Sbjct: 410 FVHSVGINMVVGYGLTESTATVSCFLPRNFVLGSVGEMMPDLEVKI--GENNEVL----- 462
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
+RG + GY+K AT +A+D DGW +TGD G R G L L R
Sbjct: 463 ----LRGKTITPGYYKKAEATAEAIDADGWFHTGDAG-----------RLEGNTLYLTDR 507
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD S G+ + P LE + I QI VI +++ A+IVP V AK
Sbjct: 508 IKDLFKTSNGKYICPQALETQFIIDRYIDQIAVIADERKFVSALIVPVYGLVKGYAKEKG 567
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + +L + I L+ R T + F Q+ ++ EPF++
Sbjct: 568 IEYQSMKDLLEHPKIQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 615
>gi|338533716|ref|YP_004667050.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337259812|gb|AEI65972.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 604
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 151/571 (26%), Positives = 247/571 (43%), Gaps = 64/571 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N ++ S+ + + D GL +GV +++++ S+N W V + G
Sbjct: 29 KKNGQWVWTTYSRFGEMVDDLRGGLAQLGVGAGDRVAVISNNRLEWAVGAYATYSLGGAY 88
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V ++EL I N S S + E RI + II G S
Sbjct: 89 VPMYESQQAKELQFIINDSGSKVVFCATDEIAQRIQSVRAELPHLEHIIRFSGTTSDTD- 147
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
S+ ++ G E+ D+A +YTSGTTG PKG
Sbjct: 148 ---------SFATLLRRGAETPTPMVSPKPT------------DLAGLIYTSGTTGQPKG 186
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIEL-MYTAVR 280
VML+H N+ + +++++ P D+ L+ LP HV+ + + +FS G + + AV
Sbjct: 187 VMLSHANIARNVSAMHEVFPMGTDDRSLAFLPWAHVFGQTVELHALFSMGASMAIAEAVE 246
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ D+L +P + SVP ++ +Y G+QK++ A + V R + R A A KR
Sbjct: 247 KIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRM----AGEKPVTRFMFRRGLAVAAEKRAL 302
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
Q + S L+ L H +K+V+ K+++ G K SG
Sbjct: 303 A------EQGKSSGLLDL---------------QHAFFDKVVFSKVRARFGGRLKYAFSG 341
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
G ++ + F + +G+ V GYGLTE+SP+ A P +GSVG + I+I A
Sbjct: 342 GSAISKEVAEFIDNLGITVYEGYGLTETSPIATANFPENRKIGSVGKALPGVRIEIDTAA 401
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
T E +G + V G VM GY+ P ++ +G TGD+G++ P
Sbjct: 402 TGEA----KQGEIVVHGHNVMMGYYNKPEENEKVFTGNGGFRTGDMGYLDPD-------- 449
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G L + GR K+ L G+ V P +E++ S+ I +V G ++ AIIV D +
Sbjct: 450 --GYLYITGRIKEQYKLENGKYVVPSPIEQSLALSTYIANALVHGMNKPYNVAIIVVDVD 507
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGE 610
+ A + + EL K + LY E
Sbjct: 508 ALKKWATEKGLDTSSMPELLKRPEVLQLYRE 538
>gi|424034170|ref|ZP_17773577.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
gi|408873321|gb|EKM12519.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
Length = 602
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 154/578 (26%), Positives = 264/578 (45%), Gaps = 69/578 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
I N V E P+F + + I+ + S D+ + ++ +
Sbjct: 103 IDNADVKVLFVGEQPQF-DAAVSIFDECKQLELIVAM-----SDDIDLGDHAFAMTWKDF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
+ G S +A ++ + E +D+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 157 VAKGDVSHQAELET-------RLEHAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 210 HDERLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+++ + + A C N+K PS +
Sbjct: 270 AVPRFYEKIFSAIHEKVSRAPFHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAI 414
L + LA+KLV K+++ +G + GG L I F+ AI
Sbjct: 321 ---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + ++KI E NE+L V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------V 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T++ DE G+L TGD G+I + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 525 RVELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|56696723|ref|YP_167084.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
gi|56678460|gb|AAV95126.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
Length = 628
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 249/545 (45%), Gaps = 57/545 (10%)
Query: 67 LRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVAL 126
LR +G+K E +S+ S++ W D G+ A G I + S+ +L ++ N S+S L
Sbjct: 78 LRKLGLKRGEVVSILSEDRKEWAWFDMGIQAVGGIASGVYTTDSANQLKYLINDSDSRFL 137
Query: 127 AVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKA 186
EN E ++ + + +I+L + D + ++GRE+ K
Sbjct: 138 IAENEEQLDKYLQIEGEVPGLLNVIIL----EDEGLHDLNHPRCMMIDRLYEIGREAEKE 193
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 246
+ +A + I +D+A +YTSGTTG PKG MLTH+N++ I + +P E
Sbjct: 194 EPGAFEA----EIAQIRPEDVALLIYTSGTTGMPKGAMLTHENIMAGIEAGAHRLPTEET 249
Query: 247 DKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 304
D+ L LP H+ ER YF + + + + + +LQ P +VP V+E +
Sbjct: 250 DEQLCFLPLCHILERDVSIYFPLASKCTVNFAESPETVFANLQEVSPATFTAVPRVWEKI 309
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
YS + ++ + R +R + L N+ P+ + A WLW
Sbjct: 310 YSQVLILAQEATPSGRAAFGMALRAGMKRAQY--------LVENKPVPAGVAANF-WLWD 360
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 422
R LV + ++ +G+ K G G+ P+ +L +Y AIGV + GY
Sbjct: 361 R---------------LVLRNLRRMLGMDKMRRGGTGAAPISPELLKWYWAIGVPLVEGY 405
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE++ + P N +G++G + +++I + G ++VRG + +G
Sbjct: 406 GMTETAGIATINTPEENRIGTIGRVVPGIDVRIAEG-----------GEIQVRGLNIFKG 454
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y++N T ++ +DGWL TGDIG + G + + GR KD I+ + G+N+
Sbjct: 455 YWRNNEKTAESFTDDGWLRTGDIGRMDDD----------GYVTITGRLKDIIITAGGKNI 504
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P E+E S I V++G ++ +I+ D+E V A+ + ++ + L K
Sbjct: 505 TPAEIESRLKFSHYISDAVIVGDKRKFLTCLIMIDQENVEKFAQDRKVPFSNFASLCAAK 564
Query: 603 TISLL 607
+ L
Sbjct: 565 EVREL 569
>gi|283783408|ref|YP_003374162.1| AMP-binding protein [Gardnerella vaginalis 409-05]
gi|283441420|gb|ADB13886.1| AMP-binding enzyme [Gardnerella vaginalis 409-05]
Length = 603
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 245/544 (45%), Gaps = 85/544 (15%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ + + +++ A+G GV P + +S+ + S +W V D +++ GA+ V
Sbjct: 44 WKSYTAEEFRDKVIAVAKGFIARGVMPGDAVSIIAHTSWQWTVLDMAIMSIGALTVPIYE 103
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
SSS ++ HI S+ ++ VE+PE ++ + EE
Sbjct: 104 TSSSLQIQHIVQDSQVCSIFVESPEMLPKVEA------------------------VQEE 139
Query: 168 IPVFSYDEIIDLGR-----ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
P +++ G E KA + DA + + + DIAT VYTSG+TG PKG
Sbjct: 140 CPTLHDVYVMNRGAIDACIEYGKAVT---DAEFYERVHAVNGSDIATIVYTSGSTGEPKG 196
Query: 223 VMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA- 278
+ LTH N + +S +P + + L LP HV+ R F F+ I L T+
Sbjct: 197 IELTHSNFVFIAKSGVISMPDIALKGSPRLLLFLPLAHVFARFMQLFCFAGNITLGLTSN 256
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
++ + D Q ++P +++ VP ++E +Y +AA + R + FAY A K
Sbjct: 257 LKTVLSDFQTFKPTFILGVPRIFEKIY----------NAASQKAGRGVKGFIFAY-ASKV 305
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GV 397
E +R Q+ S ++ +L H + +KLVY + G S + +
Sbjct: 306 ARE---WSRAQQSSS------------MVPPMLALSHSICKKLVYAPLLHVFGGSVSYAI 350
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGG L + I F+ IG+ + GYG+TE+ T +G+VG P+ + I D
Sbjct: 351 SGGAPLDLSIAHFFNGIGLPLLEGYGMTETCAPSMVNPTTGYRIGTVGLPVKGVSVAIAD 410
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G + ++ V +GY NP TKQ + +GWL+TGD G S
Sbjct: 411 -----------DGELCIKSPAVCRGYHNNPELTKQQI-VNGWLHTGDFG----------S 448
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G + + GR KD I+ + G+N+ P LE + + S +I Q VVIG + AII D
Sbjct: 449 LDDDGFVRITGRKKDLIITAGGKNLSPNALEASLMSSPIISQAVVIGDRKPFVSAIIALD 508
Query: 578 KEEV 581
EV
Sbjct: 509 LSEV 512
>gi|298252536|ref|ZP_06976330.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
5-1]
gi|297532900|gb|EFH71784.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
5-1]
Length = 603
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 245/544 (45%), Gaps = 85/544 (15%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ + + +++ A+G GV P + +S+ + S +W + D +++ GA+ V
Sbjct: 44 WKSYTAQEFRDKVIAVAKGFIARGVMPGDAVSIIAHTSWQWTILDMAIMSIGALTVPIYE 103
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
SSS ++ HI S+ ++ VE+PE ++ + EE
Sbjct: 104 TSSSLQIQHIVQDSQVCSIFVESPEMLPKVEA------------------------VQEE 139
Query: 168 IPVFSYDEIIDLGR-----ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
P +++ G E KA + DA + + + DIAT VYTSG+TG PKG
Sbjct: 140 CPTLHDVYVMNRGAIDACIEYGKAVT---DAEFYERVHAVNGSDIATIVYTSGSTGEPKG 196
Query: 223 VMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA- 278
+ LTH N + +S +P + + L LP HV+ R F F+ I L T+
Sbjct: 197 IELTHSNFVFIAKSGVISMPDIALKGSPRLLLFLPLAHVFARFMQLFCFAGNITLGLTSN 256
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
++ + D Q ++P +++ VP ++E +Y +AA + R + FAY A K
Sbjct: 257 LKTVLSDFQTFKPTFILGVPRIFEKIY----------NAASQKAGRGVKGFIFAY-ASKV 305
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GV 397
E +R Q+ S ++ +L H + +KLVY + G S + +
Sbjct: 306 ARE---WSRAQQSSS------------MVPPMLALSHSICKKLVYAPLLHVFGGSVSYAI 350
Query: 398 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
SGG L + I F+ IG+ + GYG+TE+ T +G+VG P+ + I D
Sbjct: 351 SGGAPLDLSIAHFFNGIGLPLLEGYGMTETCAPSMVNPTTGYRIGTVGLPVKGVSVAIAD 410
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G + ++ V +GY NP TKQ + +GWL+TGD G S
Sbjct: 411 -----------DGELCIKSPAVCKGYHNNPELTKQQI-VNGWLHTGDFG----------S 448
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G + + GR KD I+ + G+N+ P LE + + S +I Q VVIG + AII D
Sbjct: 449 LDDDGFVRITGRKKDLIITAGGKNLSPNALEASLMSSPIISQAVVIGDRKPFVSAIIALD 508
Query: 578 KEEV 581
EV
Sbjct: 509 LSEV 512
>gi|333911694|ref|YP_004485426.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333741894|gb|AEF87071.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 611
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/538 (27%), Positives = 260/538 (48%), Gaps = 55/538 (10%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
F GL +G+ P + + S+N W++A G GAI V S + E+ ++ H++
Sbjct: 49 FGLGLAQLGLPPGGHMGVISENRIEWVLAQMGAGLIGAITVGVYPTSPTPEVAYVAGHAD 108
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKK-SSVAPDIVEEIPVFSYDEIIDLGR 181
+ E+ E +++ L ++ II++ K S AP++ I F DE+ LG
Sbjct: 109 VDIMVCEDQEQTDKLLAALPQLPRLKKIIVMETKGLRSFAPEVRALIATF--DEVERLGA 166
Query: 182 ES-RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
++ +A + AR+ DD+ +YTSG+TG PKG M+T++N+ + + +
Sbjct: 167 QAASRAPIEEALARQTL-------DDVGLMIYTSGSTGKPKGAMITYRNIRGVVPGIAER 219
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMY-TAVRNLKDDLQRYQPHYMISVP 298
+ + G + LS LP HV E+ F+ G ++ + ++R +++DL+ P+ + VP
Sbjct: 220 LGLDGGTRHLSYLPLCHVAEQMLTSFVPVYLGSQVHFGESIRTVQEDLREVAPNMFLGVP 279
Query: 299 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 358
++E L++ I ++ + RR AL R + A A L ++ L
Sbjct: 280 RIWEKLHAAISIKMQETGPLRR----ALYRRAMAACA--------PLAEKPRRQWSLAEH 327
Query: 359 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGV 416
+ W A W V + +Q+ IG+ +A V+ G+ P+ D+ F+ +GV
Sbjct: 328 LTW------AASYWS--------VLRALQNFIGLREARVALTGAAPIPPDVVRFFRTLGV 373
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ YGLTES+ ++ R +GSVG + +I ++ G ++++G
Sbjct: 374 PLIEVYGLTESTGMVTGHRLDDVSVGSVGVATEGVQWRIASLGSSAGHEGDDSGELQIKG 433
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
V GY+KNP AT Q+L +DGWL+TGD+ R GG L + R KD ++
Sbjct: 434 DMVFAGYYKNPEATAQSL-QDGWLHTGDV-----------VRVQGGQLRIVDRLKDIMIT 481
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVH 592
+ G+N+ P E+E S I++ +V+ + ++ GA++ D E V A+R+ H
Sbjct: 482 AGGKNLTPSEIENTMKASPFIKECIVVAEGRKFVGALVQIDYETVGQWAQARRIPFTH 539
>gi|393782192|ref|ZP_10370381.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
gi|392674226|gb|EIY67675.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
Length = 602
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 264/579 (45%), Gaps = 64/579 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A L +GV+ +E + +FS N L D A A+ + + SS + +I N ++
Sbjct: 49 ANSLVALGVQEKENIGIFSQNKPECLFTDFAAFANRAVTIPLYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
L V ++ +++ II+ SV D ++ +D+ + +G
Sbjct: 109 RILFVGEQFQYDAAFSVFGFCPSLQQIIIF---DRSVVKD-RRDVSSIYFDDFLAMGEGL 164
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 243
ND + + DD+A +YTSGTTG PKGVML H L R ++DI
Sbjct: 165 -----PHNDVVEE-RTSRASEDDLANILYTSGTTGEPKGVMLHHSCFLEAFR-IHDIRLV 217
Query: 244 ENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLV 300
+ DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP
Sbjct: 218 DMSDKDVSMNFLPLTHVFEKAWSYLCIHKGVQICINLRPVDIQMTIKEIRPTLMCSVPRF 277
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
+E +Y+G+Q++I ++ ++ + IR+ +I+ L R K P ++ L
Sbjct: 278 WEKVYAGVQEKIAETTGIKKALMLDAIRVG-------KIHNIDYL-RKGKTPPLMLHL-- 327
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKV 418
+ EK VY ++ IGI + G ++P I F ++G+ +
Sbjct: 328 -------------KYQFYEKTVYSLLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINM 374
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
VGYGLTES+ ++ + + +GSVG + E+KI E NE+L +RG
Sbjct: 375 LVGYGLTESTATVSCFQNSGYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKT 423
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
+ +GY+K AT +A+D++GW +TGD G++ G L L R KD S
Sbjct: 424 ITKGYYKKAEATAEAIDKEGWFHTGDAGYLN-----------GDCLYLTERIKDLFKTSN 472
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G+ + P LE I QI +I ++ A+IVP V AK I + D EL
Sbjct: 473 GKYISPQALETKLAIDRYIDQIAIIADQRKFVSALIVPMYGFVKDYAKEKGIEYKDMEEL 532
Query: 599 SKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
+ K I L + + + Q+ ++ EPF++
Sbjct: 533 LQHPKIIGLFRARIDTLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|256825502|ref|YP_003149462.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
gi|256688895|gb|ACV06697.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
Length = 603
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 272/609 (44%), Gaps = 75/609 (12%)
Query: 49 RVFCESKLEQEI------LDFAE---GLRV----IGVKPEEKLSLFSDNSCRWLVADQGM 95
RV + +L E+ +FAE GL V G+ +++++ S N W V D G
Sbjct: 20 RVVAQRELVDEVWQEWTYAEFAERCRGLAVHLVAAGLAVGDRVAIVSPNCPAWSVVDYGA 79
Query: 96 LATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG 155
++ GA V SS+E+ ++ HS++ +AV E R+A L + + I +
Sbjct: 80 MSAGASVVPVHLASSTEQKTYVLRHSQAHVVAVLGDEELARVAGLLADEGVRQVIAIECS 139
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
+ + + V V +E I G A S A + ++ D +AT +YTSG
Sbjct: 140 QDARESAATVLGAEVVDLEEAISAG----HAAPASTHAEVARRIDSADLDALATVLYTSG 195
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG PK V LTH+NL Q ++ D G + LS LP H ERA F +G+ +
Sbjct: 196 TTGTPKAVPLTHRNLTTQFATIADRFDFTPGQRSLSFLPLSHALERAWAAFGVQQGLTIA 255
Query: 276 YTAVRNLKDD---LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
Y RN K+ L +P M+SVP +YE +Y+G +S R + AL R+
Sbjct: 256 Y--CRNPKEVQPLLAAAEPQVMVSVPRLYERVYAGAHANADSSRITRALFDWAL-RVGLR 312
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+ G + +P WA + +A++LV +I+ +G
Sbjct: 313 RNRRR--RSGLPV-----EP----------WAEAA-------YRVADRLVLHRIRDVLGG 348
Query: 393 SKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
K ++ GG +L ++ F A + V GYGL+E+SPVI+ G+VG PI
Sbjct: 349 PKTCMAVGGAALRREVEEFLLAADLLVSQGYGLSETSPVISCPGVRDWRFGTVGRPIAGM 408
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT---KQALDEDGWLNTGDIGWI 508
E++IV P G ++ RG V GY N T + A EDGW TGD+G +
Sbjct: 409 EVRIVPQPDGPDTP--GVGEIQARGDGVFAGYLPNADGTDPNEGAFTEDGWFRTGDLGRL 466
Query: 509 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 568
G L L GR+K+ IV G N+ P +E SLI +V+G +
Sbjct: 467 DED----------GYLTLTGRSKEIIVTDGGRNIAPAAIEGVLDSDSLIEYSMVVGDGRP 516
Query: 569 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT--ISLLYGELRKWTSKCSFQIGPIH 626
A++ PD AA + A A +L++ T ++ L ++ ++ +I +
Sbjct: 517 YLVAVVSPDA-----AACAEAFPGASARDLARAITERVTELTSDMARYE-----RITKVV 566
Query: 627 VVDEPFTVN 635
V +EPFT+
Sbjct: 567 VAEEPFTME 575
>gi|237785910|ref|YP_002906615.1| acyl-CoA synthetase [Corynebacterium kroppenstedtii DSM 44385]
gi|237758822|gb|ACR18072.1| acyl-CoA synthetase [Corynebacterium kroppenstedtii DSM 44385]
Length = 610
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 251/529 (47%), Gaps = 71/529 (13%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLHI 117
E++ A+GL GV+ ++++L S+ W V D + A GA+ V + GS S+S+
Sbjct: 54 EVMAVAKGLIANGVEHGDRVALLSETRYEWTVMDFAIWAAGAVTVPIYGSSSASQ----- 108
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSV--APDIVEEIPVFSYDE 175
+ +E+ I ET MRF+ L K + +P + I F+
Sbjct: 109 ------IQWIIEDSGTVFAITETREHTELMRFLELDSDGKPRLKGSPTKLRRILEFNSSA 162
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
+ L E R D+ R H S D+A+ VYTSGTTG PKG LTH N L + R
Sbjct: 163 LDTLAFEGRDVSDDAVWERIH----ATKSSDLASLVYTSGTTGRPKGCRLTHANWLGEAR 218
Query: 236 SL--YDIVP--AENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 290
SL ++I A G ++++ LP HV+ RA + G + ++ + + QR Q
Sbjct: 219 SLLTHNIARTIARPGMRYITFLPLAHVFARAISLAMAIGGAQQSHWSDFSTISIEFQRAQ 278
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P+ ++ VP V+E + +G+Q Q A + AL+ TA + + +++
Sbjct: 279 PNMILGVPRVFEKVRNGVQAQ-----AKSKGPLGALLFSRAEATAIQ-----YSKALDEE 328
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
PS ++ W R L ++L+Y+K+++A+G + + G+SGG ++ +
Sbjct: 329 GPSRVLK-----WRRA----------LYDRLIYRKVRAAMGGAVQYGISGGSAMNPELLH 373
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ IG V GYGLTES+ N++G+VG P +I D
Sbjct: 374 FFRGIGTTVYEGYGLTESTAAFCVNYDD-NIIGTVGRPSGGCSARISD-----------D 421
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G V ++G + GY+ N ATK+ D+DG+ +TGD+G I G L + GR
Sbjct: 422 GEVCLKGPIIFDGYWNNEEATKECFDDDGYFHTGDLGEILD----------SGHLKITGR 471
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
K+ +V + G+NV P LE+ LI Q++++G Q G ++ D+
Sbjct: 472 KKELLVTAGGKNVSPGPLEDRMRTHPLISQVMLVGDGQPFIGCLVTLDE 520
>gi|119717337|ref|YP_924302.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119537998|gb|ABL82615.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 600
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 244/527 (46%), Gaps = 77/527 (14%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
E+ A+GL G++ +++++ S W + D GA+ V SS+E++ I
Sbjct: 58 EVSGVAKGLIAAGIEAGDRVAVISKTRYEWTLLDYAAWFAGAVTVPIYETSSAEQIAWIL 117
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
S + A+ E + RI E ++ + + +W S+A + V D ++
Sbjct: 118 ADSGARAVVAEGADHLARIREV---RSGLDQLNHVW----SIADNAV--------DNLVR 162
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----I 234
LG +D +D + T D+AT +YTSGTTG PKG MLTH N + + +
Sbjct: 163 LG-------ADISDEELEKRRTTATPLDLATLIYTSGTTGRPKGCMLTHGNFMFELSVAV 215
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHY 293
L ++ ++ L LP HV+ R L +++ ++NL DLQ ++P +
Sbjct: 216 AELPELFEGDDSSTLL-FLPLAHVFARIIQVGCIKTRTRLGHSSDIKNLLADLQEFKPTF 274
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
+++VP V+E +++ Q T+ R+ RA A TA + ++ +PS
Sbjct: 275 ILAVPRVFEKVFN-TASQKATADGRGRIFDRA------AETAI-----AYSRGLDRGRPS 322
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 412
V H + +LVY K+ +A+G S + VSGG L + FY
Sbjct: 323 LAVR---------------AKHAVFRRLVYGKLLAALGGSCRYAVSGGAPLGDRLGHFYR 367
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
IG+ V GYGLTE++ + P +G+VG P+ T +++ D G +
Sbjct: 368 GIGLTVLEGYGLTETTAALTVNLPDAIKVGTVGRPLPGTAVRVAD-----------DGEL 416
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
RG QV GY+ N +AT +AL+ D W +TGD+G + G + + GR K+
Sbjct: 417 LFRGGQVFAGYWHNETATSEALEPDAWFHTGDVGEVDDE----------GFVRITGRKKE 466
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+V + G+NV P LE+ LI Q +V+G Q A++ D+E
Sbjct: 467 ILVTAGGKNVAPAVLEDRLRAHVLIDQCMVVGDGQPFIAALVTIDRE 513
>gi|262382159|ref|ZP_06075297.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297336|gb|EEY85266.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 633
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 153/588 (26%), Positives = 275/588 (46%), Gaps = 68/588 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ RF +++ + + GL +GV+ + ++L S+ W++ + M GA N
Sbjct: 26 KTGKRFEPTTYAEVRDLVYEEGAGLISLGVRKGDNMALLSEGRNAWIIGELAMFYAGATN 85
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I A+R II+L +
Sbjct: 86 VPLSIKLEEANDLLFRLVHADVKYIMVSGQQ-LKKIRAIKDQLPAVRKIIVLDEQAEYQD 144
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
++ S EI +G K + + + +++G+DD AT YTSGTT +P
Sbjct: 145 REM-------SLSEIRRMG----KVYLGIHPLEEFLAIGQSLGNDDYATITYTSGTTADP 193
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----IEL 274
KGV+LTH+N + V ++ + L +LP H + G++IF S+G +++
Sbjct: 194 KGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATVQV 253
Query: 275 MYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
T + LK+ +++ ++P+ ++SVP + + I++ I + +RI +
Sbjct: 254 GRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQGIRARGKNAVRLFNLALRIGY 313
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
Y EG + +L PL L +KL++ K++ G
Sbjct: 314 IYNGDSDEEEG----------------------KGFRVLLKPLVRLFDKLLFAKVRENFG 351
Query: 392 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K + GG L + FY A+G+ + GYGL+E++P+I+ P + GS G +
Sbjct: 352 GELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATPIISTNGPRRHTFGSSGVLVRP 411
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D + N VLP G KG + +RG VM GY+KNP++T + E GWL TGD+G++
Sbjct: 412 LDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPASTADTVKE-GWLYTGDMGYMR- 468
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQRR 569
G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 469 ----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQSPY 518
Query: 570 PGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTISLLYGELRKW 614
A++VP KE + R + H + S+ +E+ I ++ ++ ++
Sbjct: 519 TTALLVPSKERL-----RKHLAHQNLDLTSDQGREEAIRIIQRQIDRF 561
>gi|323495983|ref|ZP_08101047.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
gi|323318945|gb|EGA71892.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
Length = 602
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 158/578 (27%), Positives = 259/578 (44%), Gaps = 69/578 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q+I + L G++ ++K+ +FS+N +W VAD L A+ V + + + ++
Sbjct: 43 QQIDALSLALLSRGLQVQDKIGIFSNNMPQWTVADFAALQLRAVTVPIYPTNTPAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
+ N V E P+F + + I+ + S D+ E + +
Sbjct: 103 LQNADVKVLFVGEQPQF-DAAVSIFDQCEQLELIVAM-----SDDIDVGEHDFALHWQQF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
I G + A + A +Y DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 157 IAQGTKEHHAELEQRLADANY-------DDLLTLIYTSGTTGQPKGVMLDYANIGAQLEG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMI 295
+ D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 210 HDQRLSLSEDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALADVRPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+V+ + + A + EG + PS+
Sbjct: 270 AVPRFYEKIFSAIHEKVAKAPFIRKVLFTWAVNMGAKMAACHQ--EG-------RNPSF- 319
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAI 414
L H LA+KLV K+++ +G + GG L I F+ AI
Sbjct: 320 --------------ALKKAHGLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + ++KI E NE+L V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDQCFDPDSIGMAMPGAQVKI--GENNEIL---------V 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T + DE G+L TGD G I + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSNGKYIAPQMVEGTIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K E+ ++ L EL K+ F++ P
Sbjct: 525 RVELIKHHQIVEMLEQRVNDLQKELAKFEQVKKFKLLP 562
>gi|386833922|ref|YP_006239236.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
gi|385200622|gb|AFI45477.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
Length = 606
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 264/561 (47%), Gaps = 62/561 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +Q++ F+ L + ++K+++F+ N RW +AD G + A+ V + S+++++
Sbjct: 40 QFQQDLDTFSYALLANHIGVQDKIAIFAHNMPRWTIADIGTMQVRAVVVPIYATSAAKQV 99
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I N+++ L V + E +N + + + ++ I+ + K ++ D+ +
Sbjct: 100 EYILNNADVKILFVGDQEEYNCTLDIIDACPQIQKIVAM---KDNL--DLKNHPKACDWQ 154
Query: 175 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
+ G ++ +K D+ T +YTSGTTG PKGVML + NL HQ+
Sbjct: 155 TFLLEGSPLQQTALQERLEQKQLT-------DLFTLIYTSGTTGEPKGVMLDYANLAHQL 207
Query: 235 RS---LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 290
++ + + D LS LP H++ERA ++ RG Y N +++ L +
Sbjct: 208 KAHDEAFTTLNVSQYDSSLSFLPLSHIFERAWVAYVLHRGAVNCYLEDTNRVREALSEIR 267
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE +Y+ + ++ + RR++ I + F+ I ++K
Sbjct: 268 PTLMCAVPRFYEKIYTAVWDKVQKAPLFRRMIFNWAIAV--GQKRFQFI--------SKK 317
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
+P I +L + LA+KLV K++ +G + GG L +I L
Sbjct: 318 KP--------------IPFVLRQQYALADKLVLSKLRQLLGGRIRMMPCGGAKLEPNIGL 363
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ +IG+ V++GYG+TE++ ++ S+G + E+KI E NE+L
Sbjct: 364 FFHSIGINVKLGYGMTETTATVSCWEEGHFEPNSIGTLMPGAEVKI--GENNEIL----- 416
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+K P T + EDG+L TGD G P G L + R
Sbjct: 417 ----VRGGMVMRGYYKKPQETADSFTEDGFLKTGDAGEFDPQ----------GNLYITDR 462
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E + I QI VI ++ A+IVP + AK+L+
Sbjct: 463 IKELMKTSNGKYIAPQYIETKVGKDKFIEQIAVIADAKKYVSALIVPCFNSLEEYAKQLN 522
Query: 590 IVHADASELSKEKTISLLYGE 610
I + D EL K I ++ +
Sbjct: 523 IKYHDRLELIKHSDILQMFEQ 543
>gi|261253922|ref|ZP_05946495.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954558|ref|ZP_12597591.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937313|gb|EEX93302.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815104|gb|EGU50031.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 602
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 165/628 (26%), Positives = 282/628 (44%), Gaps = 83/628 (13%)
Query: 14 LSSLDYH-RHGFRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGV 72
+++LD+H R N D +A + ++ + + + Q++ + L G+
Sbjct: 1 MANLDFHIVKRIRDQIANGSDRIALKHKVG---NMWNGISWKQFGQQVDSLSLALLAHGI 57
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAV-ENP 131
+ ++K+ +FS+N +W VAD L A+ V +++ + +I ++ L V E P
Sbjct: 58 RVQDKIGIFSNNMPQWTVADFAALQLRAVTVPIYPTNTAAQSAYILQDADVRILFVGEQP 117
Query: 132 EFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKA 186
+F ++ E L AM I L G + ++ + + I + ++A
Sbjct: 118 QFDAAVSIYDQCEQLELIVAMSDEIELGGFEHAIG-----------WQQFIANAQAEQQA 166
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 246
D ++ ++ DD+ T +YTSGTTG PKGVML + N+ Q+ +
Sbjct: 167 ELDERLSQANF-------DDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSES 219
Query: 247 DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY 305
D L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++
Sbjct: 220 DVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIF 279
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
S I +++ + R+V+ F + C +K PS +
Sbjct: 280 SAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVCHQEGRK-PSLM---------- 320
Query: 366 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGL 424
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+
Sbjct: 321 -----LKKSYALADKLVLSKLRALLGGKINFMPCGGAKLDETIGRFFHAIGINVKLGYGM 375
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE++ ++ C S+G + ++KI E NE+L VRG VM+GY+
Sbjct: 376 TETTATVSCWDDKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYY 424
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
K P T + DE G+L TGD G I + G + + R K+ + S G+ + P
Sbjct: 425 KMPEETAKTFDEHGFLKTGDAGHIDEN----------GNVFITDRIKELMKTSNGKYIAP 474
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---- 600
+E + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 475 QMVEGTIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQI 534
Query: 601 ----EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 535 VEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|422494783|ref|ZP_16571078.1| AMP-binding enzyme [Propionibacterium acnes HL025PA1]
gi|313813943|gb|EFS51657.1| AMP-binding enzyme [Propionibacterium acnes HL025PA1]
Length = 646
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 251/540 (46%), Gaps = 64/540 (11%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCSEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ + +++ ++ L + + S+
Sbjct: 150 PKELDRILEARDQMPGLETVILI---------NPADQVGDHDGLTVLSLEQVRQAGVSEE 200
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGD 247
A + DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D
Sbjct: 201 IQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---D 257
Query: 248 KFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 306
LS LP H E + G + + + L +P +SVP +YE + S
Sbjct: 258 HSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS 317
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
+ ++ + S A+ + IRI E + + ++PS L AR
Sbjct: 318 -VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR- 360
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLT 425
H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLT
Sbjct: 361 --------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLT 412
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E+SP+++ P G+ G P+ +++ E E+L RG VM+GY+K
Sbjct: 413 EASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWK 461
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+ P
Sbjct: 462 APEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQ 510
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
+E + ++ L V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 511 PIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|212712744|ref|ZP_03320872.1| hypothetical protein PROVALCAL_03841 [Providencia alcalifaciens DSM
30120]
gi|212684660|gb|EEB44188.1| hypothetical protein PROVALCAL_03841 [Providencia alcalifaciens DSM
30120]
Length = 585
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 251/557 (45%), Gaps = 58/557 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++++ + D A L + V P+E + LF+ NS W + D +L A+ V + SS ++
Sbjct: 26 AEVDTKTTDIARQLLAMNVAPQENIGLFAQNSMNWSLVDIAVLHIKAVTVPLYATSSVDQ 85
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N + L V + E ++ + L + II L + + + + + ++
Sbjct: 86 AAYIINDANIRILFVGSQEQYHVACQLLTHCPQLTAIIAL-DESVELDSQVANSMHLSTF 144
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ L + +A D+ A ++ D+ T +YTSGTTG PKGVML + N+ Q
Sbjct: 145 ---MSLAQPDYQAELDARIAAQNLS-------DLFTIIYTSGTTGEPKGVMLDYYNMASQ 194
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPH 292
+ + + D L LP HV+ERA +++ G +Y N+ K+ L +P
Sbjct: 195 LYLHDNRLELSEEDVSLCFLPLSHVFERAWSFYVMHSGARNVYLTDTNMVKEALAEVKPT 254
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE +YS IQ ++ + RR++ + I I KR+ +G L+ K
Sbjct: 255 VMCAVPRFYEKVYSAIQSKVSQAPLMRRMIFKWAIAI--GKQKVKRMAKGQSLSFLNK-- 310
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
PL+ LA+KLV KI+ +G + + G L + F+
Sbjct: 311 --------------------PLYALADKLVLSKIRQGLGGRIRFMPAAGARLDDDVIAFF 350
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+ GV ++ GYG++E+ ++ LGS+G P++ ++I G
Sbjct: 351 LSAGVDIKYGYGMSETCATVSCWEDNKYPLGSIGTPLSAISVRI-----------GENDE 399
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
++V+G VM+GY+ P T DGWL TGD G I G L + R K
Sbjct: 400 IQVKGPVVMKGYYNRPQETIDTFTADGWLRTGDAGKIDAQ----------GNLYITDRLK 449
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
D + S G+ + P +E + I I VI ++ A+IVP + + A +++
Sbjct: 450 DLMKTSNGKYIAPQVIEGVLGQDRFIEHIAVIADARKFVSALIVPCYDSLEEYANSINLK 509
Query: 592 HADASELSKEKTISLLY 608
+ D EL K+ I L+
Sbjct: 510 YRDRLELLKDSKIVALF 526
>gi|87198217|ref|YP_495474.1| AMP-dependent synthetase/ligase [Novosphingobium aromaticivorans
DSM 12444]
gi|87133898|gb|ABD24640.1| AMP-dependent synthetase and ligase [Novosphingobium
aromaticivorans DSM 12444]
Length = 605
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 262/552 (47%), Gaps = 72/552 (13%)
Query: 42 SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
++ + ++R ++ +++ AE LR +G+ P ++++L S+N W VAD ++A G +
Sbjct: 31 AKHDGQWRPISWAETVRQVCLLAEALRGLGLNPGDRVALVSENRPEWCVADLAIMAAGLV 90
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V ++ + LHI +S + A+ V + + S + +I + + A
Sbjct: 91 TVPTYITNTERDHLHILENSGARAVIVSTAKLSQPLLPAALSAPCVEHVIGMEPLRQMQA 150
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 221
++ +D ++ + + D + T+ D+A +YTSGT G+P+
Sbjct: 151 ----GKLSFHDWDTMMTGDAAAARRAVDE-------RLRTVDRADLACIIYTSGTGGSPR 199
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENG---DKFLSMLPPWHVYERACGYFI-FSRGIELMYT 277
GV L H ++L + I+ + G + FLS LP H YE G F+ G ++ Y+
Sbjct: 200 GVRLHHGSILQNVEGAAHILAEDFGWDEEVFLSFLPLSHAYEHTGGQFLPIGMGAQIFYS 259
Query: 278 -AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
+ L +++ +P M+ VP ++E L + I KQ+ VA L+ + +
Sbjct: 260 EGLEKLASNIEEVRPTIMVVVPRLFEVLRTRIMKQVEKQGR----VANYLMDRALSIGGR 315
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 395
K +G R+I A P++L+ ++ + KI++ G KA
Sbjct: 316 KAAGKG----------------------RLIDA---PMNLVLDRTLRPKIRARFGGRMKA 350
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV-LGSVGHPINHTEIK 454
VSGG L + +F++++G+ + GYG TE+ PVI+ RP + + +VG P+ E+K
Sbjct: 351 MVSGGAPLNPDVGVFFQSMGLTMLQGYGQTEAGPVISCNRPRVGLKMDTVGPPMKGVEVK 410
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED----GWLNTGDIGWIAP 510
I AE E+L VRG VM GY++N + T +A+ ++ GWL+TGDIG +
Sbjct: 411 I--AEDGEIL---------VRGELVMHGYWQNEAETARAVPQNGPNAGWLHTGDIGHL-- 457
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+GR +V+ R KD IV G+NV P ++E I Q +V G +
Sbjct: 458 -DKKGR-------IVITDRKKDMIVNDKGDNVSPQKIEGMLTLQPEIAQAMVSGDKRPYI 509
Query: 571 GAIIVPDKEEVL 582
+IVPD E L
Sbjct: 510 VGLIVPDPEWAL 521
>gi|323492601|ref|ZP_08097746.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
gi|323313159|gb|EGA66278.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
Length = 602
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 257/577 (44%), Gaps = 67/577 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q++ + L G++ ++K+ +FS+N +W VAD L A+ V +++ + +I
Sbjct: 43 QQVDALSLALLAQGIRVQDKIGIFSNNMPQWTVADFAALQLRAVTVPIYPTNTAAQSAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
+++ L V F+ + I+ + S +I E + + I
Sbjct: 103 LQNADVRVLFVGEQAQFDAAVSIFDECEQLELIVAM-----SDDVEIGEHSFAIHWQQFI 157
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
+ + D+ + E DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 158 AQSNQDHQQELDT-------RLEQANFDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGH 210
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMIS 296
+ D L LP HV+ERA +++ +G Y +++ L +P M +
Sbjct: 211 DQRLSLSESDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVREALSEVRPTVMCA 270
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP YE ++S I +++ + R+V+ F + C + + PS
Sbjct: 271 VPRFYEKIFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMALC-HQEGRNPS--- 318
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIG 415
+L + LA+KLV K+++ +G + GG L I F+ AIG
Sbjct: 319 ------------VMLKKSYALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIG 366
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ V++GYG+TE++ ++ C S+G + ++KI D NE+L VR
Sbjct: 367 INVKLGYGMTETTATVSCWDDKCFNPDSIGMSMPGAQVKIGD--NNEIL---------VR 415
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+K P T + DE G+L TGD G I + G L + R K+ +
Sbjct: 416 GPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMK 465
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 466 TSNGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDR 525
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 526 VELIKHHQIVEMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|423343693|ref|ZP_17321406.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
gi|409214715|gb|EKN07724.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
Length = 634
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 151/590 (25%), Positives = 281/590 (47%), Gaps = 71/590 (12%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
+ + F +++Q++ GL +GVK + ++L S+ W++ + M GA N
Sbjct: 25 KTTNAFEPTTYKEVQQQVYTAGAGLIALGVKKSDNMALLSEGRNAWIIGELAMFYAGATN 84
Query: 103 VVRGSR-SSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + + +LL H++ + V + +I + + +I
Sbjct: 85 VPLSIKLEEANDLLFRLVHADVKYILVSGNQL-KKIRSIMDKLPLVEKVI---------- 133
Query: 162 PDIVEEIPV-----FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGT 216
+++E+P S+ E++ +G+E + S + +++ + D AT YTSGT
Sbjct: 134 --VIDELPEHKEKEISWSEVLRMGKEYLASHSLEDFLAVG---QSLQNGDYATITYTSGT 188
Query: 217 TGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG---- 271
T +PKGV+LTH+N + V ++ + L +LP H + G++IF S+G
Sbjct: 189 TADPKGVILTHRNYTANVEQALSCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVA 248
Query: 272 -IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
+++ T + LK+ +++ ++P+ ++SVP + + I++ I R + +
Sbjct: 249 TVQVGRTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQGI-------RAQGKHVT 301
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
R+ IY G + +L L PL L +++++ K++
Sbjct: 302 RLFNFALKVAYIYNGDGGEDKGRGTRFL---------------LKPLVSLFDRVLFTKVR 346
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 446
G K + GG L + FY AIG+ + GYGL+E++PVI+ P + GS G
Sbjct: 347 ENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATPVISTNGPHRHTFGSSGV 406
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
+ ++KI DA+ E LP G KG + +RG VM GY+KNP +T + + + WL TGD+G
Sbjct: 407 LVRPLDLKICDADGKE-LPTGEKGEIVIRGENVMAGYWKNPVSTAETV-RNRWLYTGDMG 464
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQ 565
++ H G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 465 YMG--HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNN 514
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELRKW 614
A++VP+K+ + K L+ H D +S+ +E+ I ++ ++ ++
Sbjct: 515 QSPYTVALVVPNKDRL---KKHLAHQHLDLSSDKGREEAIRIIQSQIDRF 561
>gi|335050302|ref|ZP_08543272.1| AMP-binding enzyme [Propionibacterium sp. 409-HC1]
gi|342211580|ref|ZP_08704305.1| AMP-binding enzyme [Propionibacterium sp. CC003-HC2]
gi|333769965|gb|EGL47044.1| AMP-binding enzyme [Propionibacterium sp. 409-HC1]
gi|340767124|gb|EGR89649.1| AMP-binding enzyme [Propionibacterium sp. CC003-HC2]
Length = 644
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 251/540 (46%), Gaps = 64/540 (11%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFAGNCSEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ + +++ ++ L + + S+
Sbjct: 148 PKELDRILEARDQMPGLETVILI---------NPADQVGDHDGLTVLSLEQVRQAGVSEE 198
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGD 247
A + DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D
Sbjct: 199 IQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---D 255
Query: 248 KFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 306
LS LP H E + G + + + L +P +SVP +YE + S
Sbjct: 256 HSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS 315
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
+ ++ + S A+ + IRI E + + ++PS L AR
Sbjct: 316 -VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR- 358
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLT 425
H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLT
Sbjct: 359 --------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLT 410
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E+SP+++ P G+ G P+ +++ E E+L RG VM+GY+K
Sbjct: 411 EASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWK 459
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+ P
Sbjct: 460 APEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQ 508
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
+E + ++ L V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 509 PIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 568
>gi|453066970|ref|ZP_21970260.1| long-chain fatty-acid--CoA ligase [Rhodococcus qingshengii BKS
20-40]
gi|452767357|gb|EME25597.1| long-chain fatty-acid--CoA ligase [Rhodococcus qingshengii BKS
20-40]
Length = 597
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 242/539 (44%), Gaps = 95/539 (17%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +++ A GL GV+ ++++L S W + D + A GA V SS ++
Sbjct: 50 EFAEQVTGVANGLIAAGVQAGDRVALLSATRYEWTLFDFAIWAAGAATVPIYDSSSQGQV 109
Query: 115 LHIYNHSESVALAVE---NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
I SE+V VE + + F TL KA M+ + VE++
Sbjct: 110 SWILEDSEAVIAIVETGAHEQLFQDAPSTL--KAVMQ-----------IDDGAVEKLTAQ 156
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
+D +DA + I +DD+A+ VYTSGTTG PKG +LTH+N L
Sbjct: 157 G---------------ADVDDAELKKRLAGIKADDLASLVYTSGTTGRPKGCILTHRNFL 201
Query: 232 HQIRSLYD------IVPAENGDKFLSMLPPWHVYERACGYFIFSRGI-ELMYTAVRNLKD 284
++R + VP G++ L+ LP HV RA F G + ++ +
Sbjct: 202 SEVRGILTASIGKVAVP---GNRVLTFLPLAHVLARAVSLATFEAGASQAHWSDFATITT 258
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR---ISFAYTAFKRIYE 341
+RY+P+ ++ VP V+E + G AAR+ + I +FA T K E
Sbjct: 259 QFERYKPNTILGVPRVFEKVRDG---------AARKAESGGKIPGAIFAFAETTAKEYSE 309
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 400
++ PS IL H +A+KLVY K++ A+G +SGG
Sbjct: 310 AL----DKGGPSL---------------ILKAKHAVADKLVYSKLREALGGECWFAISGG 350
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
G+L + F+ +GV + GYGLTE++ P +G+VG P+ ++I +
Sbjct: 351 GALTPELGHFFRGLGVPIYEGYGLTETTAAHCVNVPGAQKIGTVGQPMGGNGVRIAE--- 407
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
G +++ G V +GY+KN AT++ +GW+ TGD+G +
Sbjct: 408 --------DGEIELNGGVVFKGYWKNDKATEETF-VNGWMRTGDLGEL----------DS 448
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G L + GR KD +V + G+NV P +E+ S++ Q VV+G + A++ D E
Sbjct: 449 DGYLSITGRKKDLLVTAGGKNVSPGPMEDRIRSHSIVSQAVVVGDGKTYITALLTVDPE 507
>gi|329954188|ref|ZP_08295283.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
gi|328528165|gb|EGF55145.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
Length = 593
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 263/594 (44%), Gaps = 74/594 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+K Q + A L +GV+ + + +FS N L D A + + + SSS +
Sbjct: 31 NKFSQTVRQAANALVALGVEEQRNIGIFSQNKPECLFTDFAAFANRLVTIPLYATSSSAQ 90
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ L V ++ +++ +I+ SV D ++ ++ Y
Sbjct: 91 AQYIINDAQIRFLFVGEQFQYDAAFSAFGFCHSLQKLIIF---DRSVVLDPRDKTSIY-Y 146
Query: 174 DEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
D+ + LG + AR DD+A +YTSGTTG PKGVML H N
Sbjct: 147 DDFLALGEGLPHNDVVEERSARA-------SDDDLANILYTSGTTGEPKGVMLHHFNYRE 199
Query: 233 QIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRY 289
IR ++DI DK +SM LP HV+E+A Y RG+++ + +++ ++
Sbjct: 200 AIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKEV 258
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 259 RPTLMCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN--------------- 303
Query: 350 KQPSYLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSLP 404
ID+L R+ LHL EK +Y ++ IGI + G ++
Sbjct: 304 ---------IDYL--RVGKTPPLMLHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAVS 352
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
I F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 353 DEICEFVHSVGINMVVGYGLTESTATVSCFLDKGYEIGSVGTVMPDLEVKI--GENNEIL 410
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
+RG + GY+K P AT A+D+DGW +TGD G++ H L
Sbjct: 411 ---------LRGKTITTGYYKKPEATAAAIDKDGWFHTGDAGYLKDDH-----------L 450
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
L R KD S G+ + P LE I QI +I ++ A+IVP V
Sbjct: 451 YLTERIKDLFKTSNGKYISPQALETKLAIDRYIDQIAIIADQRKFVSALIVPVYGLVKNY 510
Query: 585 AKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
AK + + D ++L + + L+ R T + F Q+ ++ EPF +
Sbjct: 511 AKEKGLEYKDMADLLQHPKVQALF-RARIDTLQQQFANYEQVKRFTLLPEPFNM 563
>gi|162449173|ref|YP_001611540.1| hypothetical protein sce0903 [Sorangium cellulosum So ce56]
gi|161159755|emb|CAN91060.1| unnamed protein product [Sorangium cellulosum So ce56]
Length = 598
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 265/568 (46%), Gaps = 84/568 (14%)
Query: 44 RNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV 103
R H +F ES+ G + ++ S N +W+ D L G +
Sbjct: 40 RVHHLALFLESR---------------GFDASQVGAILSYNCPQWVHVDLAALLVGGKSA 84
Query: 104 VRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFI--ILLWGKKSSVA 161
S+++++ +I NH+E+ L+V+N E+F +I+ + + IL++ +S++
Sbjct: 85 GLYPNSTAKDIQYILNHTEATLLSVQNKEYFQKISGEKGEYSVPDSVSWILVFDGDTSIS 144
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNP 220
P + SY++ + GR A + A+ Y I A +YTSGTTGNP
Sbjct: 145 PKAI------SYEQALAEGR----ALAGQPGAKTFADYLAKIDPRAGAFLIYTSGTTGNP 194
Query: 221 KGVMLTHKNLLH--QIRSLYDIVPAENGDKFLSMLPPWHVYER--ACGYFIFSRGIELMY 276
KG ML+H NL + + Y +P G F S LP H+ E+ G + R
Sbjct: 195 KGAMLSHDNLAYTADMAVKYWNLPFARGTMF-SFLPLCHIAEKLQCVGAGLTQRYTVNFC 253
Query: 277 TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 336
+ N+ +L QP ++ VP ++E + G+ ++ A++ +A +A
Sbjct: 254 SKFENVSSELPEVQPTLLLCVPRLWEKMMEGVMAKVRGGKGAKKKLAE------WALAVG 307
Query: 337 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG 396
R+ + Q+ PS L AL LA+KLV K+++A+G+ KA
Sbjct: 308 ARVAQA---KYAQRAPSALDAL---------------QLKLADKLVLGKVRAALGLGKAE 349
Query: 397 V--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 454
V SG +L HI ++ A+G+++ +G TES+ VI P G+VG P+ E K
Sbjct: 350 VLASGAAALAPHISTWFRALGLEILEDFGQTESTGVICMTEPGIESAGTVGKPVPGVEFK 409
Query: 455 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHS 513
+ AE E+L RG V GY+K+ +AT+ AL EDGWL+TGD+G W +
Sbjct: 410 L--AEDGEIL---------TRGRHVFVGYYKDKAATEAAL-EDGWLHTGDLGEW----ND 453
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
RG+ L + GR K+ + S G+ + PL +EE + +I Q+ ++G D R+ +
Sbjct: 454 RGQ-------LKIRGRKKEILKTSGGKMIAPLPIEERLKAAEIISQVCMVG-DGRKYLSA 505
Query: 574 IVPDKEEVLMAAKRLSIVHADASELSKE 601
++ E L K + +DA+ S E
Sbjct: 506 LITLTEGKLAELKERGALSSDAAITSAE 533
>gi|422394515|ref|ZP_16474556.1| putative CoA ligase [Propionibacterium acnes HL097PA1]
gi|422437290|ref|ZP_16514137.1| AMP-binding enzyme [Propionibacterium acnes HL092PA1]
gi|422492750|ref|ZP_16569055.1| AMP-binding enzyme [Propionibacterium acnes HL086PA1]
gi|422514961|ref|ZP_16591079.1| AMP-binding enzyme [Propionibacterium acnes HL110PA2]
gi|422523902|ref|ZP_16599913.1| AMP-binding enzyme [Propionibacterium acnes HL053PA2]
gi|422530289|ref|ZP_16606250.1| AMP-binding enzyme [Propionibacterium acnes HL110PA1]
gi|422544310|ref|ZP_16620150.1| AMP-binding enzyme [Propionibacterium acnes HL082PA1]
gi|313794135|gb|EFS42155.1| AMP-binding enzyme [Propionibacterium acnes HL110PA1]
gi|313803257|gb|EFS44453.1| AMP-binding enzyme [Propionibacterium acnes HL110PA2]
gi|313839211|gb|EFS76925.1| AMP-binding enzyme [Propionibacterium acnes HL086PA1]
gi|314964031|gb|EFT08131.1| AMP-binding enzyme [Propionibacterium acnes HL082PA1]
gi|315078278|gb|EFT50317.1| AMP-binding enzyme [Propionibacterium acnes HL053PA2]
gi|327334413|gb|EGE76124.1| putative CoA ligase [Propionibacterium acnes HL097PA1]
gi|327457568|gb|EGF04223.1| AMP-binding enzyme [Propionibacterium acnes HL092PA1]
Length = 646
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 251/540 (46%), Gaps = 64/540 (11%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ + +++ ++ L + + S+
Sbjct: 150 PKELDRILEARDQMPGLETVILI---------NPADQVGDHDGLTVLSLEQVRQAGVSEE 200
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGD 247
A + DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D
Sbjct: 201 IQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---D 257
Query: 248 KFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 306
LS LP H E + G + + + L +P +SVP +YE + S
Sbjct: 258 HSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS 317
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
+ ++ + S A+ + IRI E + + ++PS L AR
Sbjct: 318 -VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR- 360
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLT 425
H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLT
Sbjct: 361 --------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLT 412
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E+SP+++ P G+ G P+ +++ E E+L RG VM+GY+K
Sbjct: 413 EASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWK 461
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+ P
Sbjct: 462 APEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQ 510
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
+E + ++ L V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 511 PIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|300776784|ref|ZP_07086642.1| long-chain-fatty-acid--CoA ligase [Chryseobacterium gleum ATCC
35910]
gi|300502294|gb|EFK33434.1| long-chain-fatty-acid--CoA ligase [Chryseobacterium gleum ATCC
35910]
Length = 589
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 156/580 (26%), Positives = 274/580 (47%), Gaps = 66/580 (11%)
Query: 35 VATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQG 94
+ I +++ ++ K + I A L+ GV+ ++++++SDNS W++ D
Sbjct: 17 IKAAIGFKKKDAAWKELSWKKFSEIIFKTANALKEAGVQENDRVAIYSDNSSEWMIMDLA 76
Query: 95 MLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLW 154
+A GAI V S +++E+ HI N S + + V N ++ E L + I++
Sbjct: 77 SMALGAITVPIYSTNNAEQAEHIINDSGAKVVLVGNQMQYDACLELLHKEENNLETIII- 135
Query: 155 GKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTS 214
S A I +E F ++ I KA ++ Y DD AT +YTS
Sbjct: 136 ---SKKAVWIKKEFNSFYLEDFI------AKASPKLEICKREY-------DDTATLIYTS 179
Query: 215 GTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGI 272
GTTG PKGVMLTH N + S ++ +N ++ LS+ LP HV+ER+ G
Sbjct: 180 GTTGIPKGVMLTHGNFIKAFDSHFEFFKFKNFEEELSLAFLPLSHVFERSWSLLCLYGGA 239
Query: 273 ELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
+ + +N+ L+ +P M +VP ++ +Y+G+ ++ S+ ++ + F
Sbjct: 240 RVYFLEDPKNVAKALEEVKPTAMCAVPRFFQKVYAGVLEKAEEGSSLKKKI--------F 291
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
+ A K +E L RN+KQ + L + +A+ LV+ KI+ +G
Sbjct: 292 DW-ALKTGWETAELRRNEKQVPLGLKLKE---------------SVADMLVFSKIKEKMG 335
Query: 392 ISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
+ GG SL + F+E++G+ V VGYGLTE++ + T G+ G P+
Sbjct: 336 GRLWFLPCGGASLSPEVTRFFESVGIHVTVGYGLTETTATLTLFPLTHFEHGTSGKPLPG 395
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
E++I G ++ RG+ +M+GY+K P T++ EDGW TGD G
Sbjct: 396 VEMRI-----------GENDEIQARGNGIMKGYYKKPEETQKVFTEDGWFKTGDAG---- 440
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ G L++ R KD + S G+ + P ++E ++ I+QI++I + ++
Sbjct: 441 ------TFDDKGNLIITDRIKDLMKTSNGKYIAPQQIENLLTNNNFIQQIMLIAEGRQFV 494
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 610
A+IVP+ E + K+ +I + + K + + LY E
Sbjct: 495 SALIVPNFEFLQDYIKKNNIPFTNWEDAVKNEKVIDLYKE 534
>gi|296394475|ref|YP_003659359.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
gi|296181622|gb|ADG98528.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
Length = 599
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 243/528 (46%), Gaps = 75/528 (14%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+++ A+GL GV+ +++++ + W + D + A GA+ SSSE++ I
Sbjct: 53 EQVRKVAKGLVASGVEHGDRVAICAPTRYEWALLDFAVWAAGAVTTSIYETSSSEQVRWI 112
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
+ SE+ L V++ + L + +R ++ G P VE++ + + +
Sbjct: 113 ISDSEAKLLVVQDAKLLQAHEAVLATIPTLRETLVFDGD-----PGAVEQLELRG-ENVP 166
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
D +SR+A +G+D +AT +YTSGTTG PKGV LTH+N L ++ +
Sbjct: 167 DSELDSRRA--------------QLGADKLATLIYTSGTTGRPKGVCLTHRNFLSEVIAT 212
Query: 238 YD----IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPH 292
+ + P + LP H++ RA S + + + ++ L +DLQ+ QP
Sbjct: 213 QEPIKAMAPKQGRANTAMFLPMAHIFARALTITSMSANVLIEFLSSTATLSEDLQKIQPT 272
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
+ SVP VYE +Y +K+ + + RA S A+ E +P
Sbjct: 273 ILFSVPRVYEKVYDSAKKKA-AAGGKEGIFERA----SAVAVAYSEAVE-------NGKP 320
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFY 411
++ L H L ++L+Y K+++A+G G VSGG ++ + F+
Sbjct: 321 GVVLKL---------------QHALFDRLLYSKLRAAVGGKVVGAVSGGAAISPRLAHFF 365
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
IGV V GYGLTES+ I P N +GSVG + +I D G
Sbjct: 366 NGIGVSVYQGYGLTESTAGITFNSPVANRVGSVGKLVAGCSARIAD-----------DGE 414
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
V + G V Y++NP AT A+ EDGW + GD+G I G L + GR K
Sbjct: 415 VLLAGPVVFSEYWRNPEATAGAI-EDGWFHCGDLGRIDED----------GFLYITGRKK 463
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
D IV + G+NV P LEE +L+ Q VV+G + A++ D E
Sbjct: 464 DIIVTAGGKNVAPQVLEEVLKEHNLVSQGVVVGDGRPFIAALLTLDPE 511
>gi|393786196|ref|ZP_10374332.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
gi|392659825|gb|EIY53442.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
Length = 601
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 258/581 (44%), Gaps = 68/581 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A L + V+ EE + +FS N L D A A+ V + SS + +I N ++
Sbjct: 49 ASSLVALSVEEEENIGIFSQNKPECLFVDFAAFANRAVTVPLYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE- 182
L V +F A ++ I+++ + P V I +DE +++G
Sbjct: 109 RFLFV-GEQFQYDAAFSIFGFCPSLQQIIIFDRDVVKDPRDVSSI---YFDEFLEMGEGL 164
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+ +R DD+A +YTSGTTG PKGVML H L R ++DI
Sbjct: 165 PHNEVVEERTSRA-------SEDDLANILYTSGTTGEPKGVMLHHSCFLEAFR-IHDIRL 216
Query: 243 AENGDKFLSM--LPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPL 299
+ D+ +SM LP HV+E+A Y +G+++ +++ ++ +P M SVP
Sbjct: 217 VDMTDEDVSMNFLPLTHVFEKAWSYLCIYKGVQICVNLRPADIQMTIKEIRPTLMCSVPR 276
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+E +Y+G+Q++I ++ ++ + IR+ RI+ R K P ++ L
Sbjct: 277 FWEKVYAGVQEKIAETTGIKKTLMMDAIRVG-------RIH-NIDYIRQGKTPPLMLHL- 327
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVK 417
+ EK +Y ++ IGI + G ++P I F ++G+
Sbjct: 328 --------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGID 373
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
+ VGYGLTES+ ++ T +GSVG + E+KI E NE+L +RG
Sbjct: 374 MLVGYGLTESTATVSCTSKTGYDIGSVGQVMPDVEVKI--GEDNEIL---------LRGK 422
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
+ +GY+K AT +D DGW +TGD G+ G L L R KD S
Sbjct: 423 TITKGYYKKAEATAATIDADGWFHTGDAGYFK-----------NGQLYLTERIKDLFKTS 471
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
G+ + P LE + I QI +I ++ A+IVP V AK I + D E
Sbjct: 472 NGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKDMEE 531
Query: 598 LSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
L + I L+ R T + F QI ++ EPF++
Sbjct: 532 LLQHPKIVGLF-RARIDTLQQQFANYEQIKRFTLLPEPFSM 571
>gi|365837168|ref|ZP_09378548.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
gi|364562746|gb|EHM40580.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
Length = 600
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/586 (26%), Positives = 266/586 (45%), Gaps = 80/586 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A L +GV +E++++F+ NS W + D +L AI V S +++ + + N ++
Sbjct: 50 LALALCALGVDVQERVAIFAHNSVSWSLIDLAILHLRAITVPVYSTNTAAQTAFVLNDAD 109
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V+ +N + A+R V P + E I V S + ID+
Sbjct: 110 VRILFVDGQSQYN-------AALALR----------GVCPQL-EHIIVMS--DSIDMQGC 149
Query: 183 SRKAFSDSNDARKHYKY--------ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 234
DS A +Y E D+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 150 EIACTLDSFVASAQERYLPLLKERIEQADMSDLFTLIYTSGTTGEPKGVMLNYTNMGAQL 209
Query: 235 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 293
R + + D L LP HV+ERA +++ G + +Y + N +++ +Q +P
Sbjct: 210 RLHDERLTVTADDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLSDTNQVREAMQSVKPTV 269
Query: 294 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 353
M +VP YE ++S I +++ + +R + + I + KR F R +P+
Sbjct: 270 MCAVPRFYEKIFSAIHEKVAQAKWHKRAMFKCAI-----WVGEKR----FLTERAGCKPN 320
Query: 354 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYE 412
+L +H LA+KLV K++ +G + + G L ++ LF++
Sbjct: 321 ---------------VVLSAMHKLADKLVLSKLRGILGGRVRFLPAAGAKLDDNVILFFQ 365
Query: 413 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 472
A+G ++ GYG+TE+ ++ GS+G P+ E++I G + +
Sbjct: 366 ALGANIKYGYGMTETCATVSCWEENDFRFGSIGKPLPDVEVRI-----------GQENEI 414
Query: 473 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 532
+VRG VM GY+ P T EDGWL TGD G + + G L + R KD
Sbjct: 415 QVRGPIVMCGYYNKPLETAATFTEDGWLKTGDAGALDEN----------GNLFITERLKD 464
Query: 533 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 592
+ S G+ + P +E + I Q+ VI ++ A+IVP E + AK +++ +
Sbjct: 465 LMKTSNGKYIAPQMVEGTLAQDRFIEQVAVIADARKFVSALIVPCFESLEEYAKSINLKY 524
Query: 593 ADASELSKEKTISLLYG----ELRKWTSKCSFQIGPIHVVDEPFTV 634
D +L + I ++ E++K +K Q+ ++ E F++
Sbjct: 525 HDRLDLLRHSHIVEMFDQRLREMQKGLAKFE-QVKRFTLLPEAFSM 569
>gi|407069899|ref|ZP_11100737.1| long-chain-fatty-acid--CoA ligase [Vibrio cyclitrophicus ZF14]
Length = 602
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/572 (26%), Positives = 259/572 (45%), Gaps = 72/572 (12%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A+GLRV ++K+ +FS+N +W VAD L + V +++ + +I +++
Sbjct: 53 LAQGLRV-----QDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNTAAQSSYIIQNAD 107
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V F+ + ++ + S +I E S+ + + G E
Sbjct: 108 VKILFVGEQAQFDAAVSLFEECEQLEVVVAM-----SNDINIQEHSFAVSWQDFMARGVE 162
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+++ D + DD+ T +YTSGTTG PKGVML + N+ +Q++ + +
Sbjct: 163 AQQVELD-------VRLADASMDDLLTLIYTSGTTGQPKGVMLDYTNIGYQLKGHDERLS 215
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVY 301
D L LP HV+ERA ++ +G Y ++D L +P M +VP Y
Sbjct: 216 LTKDDVSLCFLPLSHVFERAWTFYALYKGATNCYLQDTMQVRDALSDVKPTVMCAVPRFY 275
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E ++S I +++ + R+V+ + + + + EG + PS++
Sbjct: 276 EKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQ--EG-------RTPSFM------ 320
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQV 420
L H LA+KLV K+++ +G + + GG L I F+ AIG+ V++
Sbjct: 321 ---------LKKSHALADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKL 371
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYG+TE++ ++ C S+G + E+KI G+K + VRG VM
Sbjct: 372 GYGMTETTATVSCWDDRCFNPDSIGMSMPGAEVKI-----------GAKDEILVRGPMVM 420
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GY+K P T DE G+L TGD G + G L + R K+ + S G+
Sbjct: 421 RGYYKMPEETANTFDEHGFLKTGDAGHFDEN----------GNLFITDRIKELMKTSGGK 470
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
+ P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 471 YIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVK 530
Query: 601 --------EKTISLLYGELRKWTSKCSFQIGP 624
EK ++ L EL K+ F++ P
Sbjct: 531 HHQIIEMLEKRVNNLQQELAKFEQVKKFKLLP 562
>gi|419420112|ref|ZP_13960341.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes PRP-38]
gi|379978486|gb|EIA11810.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes PRP-38]
Length = 644
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 253/542 (46%), Gaps = 68/542 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ + +++ ++ L + + S+
Sbjct: 148 PKELDRILEARDQMPGLETVILI---------NPADQVGDHDGLTVLSLEQVRQAGVSEE 198
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGD 247
A + DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D
Sbjct: 199 IQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---D 255
Query: 248 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETL 304
LS LP H E + G + T V N K L +P +SVP +YE +
Sbjct: 256 HSLSFLPLSHALEWGWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQV 313
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
S + ++ + S A+ + IRI E + + ++PS L A
Sbjct: 314 MS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRA 357
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYG 423
R H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYG
Sbjct: 358 R---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYG 408
Query: 424 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 483
LTE+SP+++ P G+ G P+ +++ E E+L RG VM+GY
Sbjct: 409 LTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGY 457
Query: 484 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 543
+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 458 WKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNIS 506
Query: 544 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 603
P +E + ++ L V++G ++ ++ P +V A+RL I E+ + +
Sbjct: 507 PQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEE 566
Query: 604 IS 605
++
Sbjct: 567 LA 568
>gi|403285132|ref|XP_003933892.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 698
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 241/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V SE + +I N +E + V+ PE
Sbjct: 146 PDQCVGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGSEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + V S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVLM----DAYGSELVERGKKCGVEVISMKAMEDLGRTNRQ- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG ++TH+N++ ++ ++P
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGALITHRNVVSDCSAFVKMTEKVLP 309
Query: 243 AENGDKFLSMLPPWHVYERA--CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ C I +R L DDL+ QP VP +
Sbjct: 310 LNASDTHISFLPLAHMYEQLMLCVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIVRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW +KL++ KIQS++G + ++G + + F A +G +
Sbjct: 410 SLW---------------DKLIFHKIQSSLGGRVRLMITGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTVPGDWTAGHVGAPMPCNWIKLVDVEEMNYMAAKGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKEPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E LRS + Q+ V G+ Q AI+VPD E+L + R E
Sbjct: 565 GEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLIAIVVPD-SEILCSWARKRGFDGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|258648793|ref|ZP_05736262.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
gi|260851128|gb|EEX70997.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
Length = 609
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 255/556 (45%), Gaps = 63/556 (11%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +L + L +G+ +E++++FS N + G A+ SS ++
Sbjct: 41 QFSTRVLRVSYALLALGIGRQERIAVFSQNKPECMYVSFGGYGIRAVTTPFYPSSSGAQI 100
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++ N +E L V + ++ L ++ I++ SV + + ++ +D
Sbjct: 101 TYMMNDAEVRLLFVGEQQQYDVAFSVLSLCKSLERIVIF---DKSVKRKETDHLSIY-FD 156
Query: 175 EIIDLGRESRKAFSDSNDARKHYK--YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
E ++L + +AR Y+ + DD+A +YTSGTTGN KGV+LT+K
Sbjct: 157 EFLEL--------ASPEEARGEYRQRMKEANYDDMADILYTSGTTGNSKGVILTYKMYRG 208
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGI-ELMYTAVRNLKDDLQRYQP 291
+ +P D FL+ LP H++ER Y FS G+ + + ++ +Q +P
Sbjct: 209 AVYGNGANLPLSPNDVFLNFLPFTHIFERGWSYLGFSAGVCQAINERPADVLKSMQEIRP 268
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M SVP ++E +Y G+Q++I S +R + + + Y + +QK+
Sbjct: 269 TCMSSVPRLWEKIYQGVQEKIAASPKMQRSLMKDALETGMRY---------WGDYASQKR 319
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDL 409
P+ ++ + + L ++ VYK ++ +G+ +A + G ++ ++
Sbjct: 320 PAPMMLKMKYK--------------LYDRTVYKLLRKTLGLDRANFFPTAGAAVSPEVEK 365
Query: 410 FYEAIGVKVQVGYGLTESSPVIAA-RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F A+G+ + VGYGLTES+ ++ + LGSVG + E+KI NE+L
Sbjct: 366 FAHAVGLYMMVGYGLTESTATVSNDHKNERATLGSVGRILPGLELKI--GANNEIL---- 419
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+RG + GY+K SATK LD DGW +TGD G++ G L L
Sbjct: 420 -----LRGDTITPGYYKKESATKAVLDADGWFHTGDAGYMK-----------DGELFLTE 463
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R KD S G+ + P ++E I Q VV+ +++ A+IVPD + + A +
Sbjct: 464 RIKDLFKTSNGKYIAPQQIESKMTIDRYIDQCVVVANERKFVSALIVPDFQALEAYANQN 523
Query: 589 SIVHADASELSKEKTI 604
I A EL ++ I
Sbjct: 524 GIAFASHEELCRKPEI 539
>gi|407278950|ref|ZP_11107420.1| long-chain fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 596
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 233/533 (43%), Gaps = 83/533 (15%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+ +++ A+GL GV+P ++++L S W + D + A GA V SS+E++
Sbjct: 50 QFAEQVSGVAKGLIAAGVQPGDRVALLSATRYEWALFDYAIWAAGAATVPIYDSSSTEQI 109
Query: 115 LHIYNHSESVALAVENPE---FFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
I SE+ VE F + +TL + +R +V I E V
Sbjct: 110 RWILQDSEAGIAVVETARHEALFVDMPDTL--RRTLRI------DGGAVETLIAEGAGV- 160
Query: 172 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
+DA + + I +DD+A+ VYTSGTTG PKG MLTH+N
Sbjct: 161 -------------------DDATLQARLDGIRADDLASLVYTSGTTGRPKGCMLTHRNFY 201
Query: 232 HQIRSLYDIVPAE---NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQ 287
++R + E G + L+ LP HV RA +F G + ++ + +
Sbjct: 202 SEVRGILTASIGEVAKPGSRVLTFLPLAHVLARAVSLAVFEGGAAQAHWSDFGTISAQFE 261
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
RY P+ ++ VP V+E + ++ + FA+ I L R
Sbjct: 262 RYAPNTILGVPRVFEKVRDAAARKAAAGGRFNAAI--------FAFAEETAIAYSESLDR 313
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 406
PS+ L +A+KLVY K++ A+G +SGGG+L
Sbjct: 314 G--GPSF---------------ALKAKRNMADKLVYAKLRQAMGGECWFAISGGGALSPR 356
Query: 407 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 466
+ F+ +GV + GYGLTES+ + P +G+VG P+ +I D
Sbjct: 357 LGHFFRGVGVPIYEGYGLTESTAAHSVNVPGAQKIGTVGQPMGGNSTRIAD--------- 407
Query: 467 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 526
G +++RG V QGY++N AT +A DGW TGD+G I G + +
Sbjct: 408 --DGEIELRGGVVFQGYWRNEKATAEAF-HDGWFRTGDLGEIDED----------GYVSI 454
Query: 527 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
GR KD I+ + G+NV P LE+ +L+ Q VVIG + A++ D E
Sbjct: 455 TGRKKDLIITAGGKNVSPGPLEDRMRSHTLVSQAVVIGDGRSYITALLTVDPE 507
>gi|121594394|ref|YP_986290.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
gi|120606474|gb|ABM42214.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length = 609
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 266/588 (45%), Gaps = 61/588 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ ++ + + + G+ ++++ N + DQ ++ATG + V + +
Sbjct: 47 AQTQERVQQCSRAIAASGLPQGARIAILLPNGLDAMSIDQAVMATGCVPVPLHAIDNPGS 106
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE-IPVFS 172
+ +I +E L VE PE + RI + + ++ S+ P E+ +PV
Sbjct: 107 IAYILADAEVSLLVVEEPEQWRRIRDVGMPLPHLMGVVTT--NASTGLPTAAEQDVPVAP 164
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
L + A +D+ G +D+A VYTSGTTG PKGVML+H N++
Sbjct: 165 ------LAAWLQHAAADTPLPSPP------GPEDLAAIVYTSGTTGKPKGVMLSHANVVA 212
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
++++ + + D FLS LP H +ER GY++ + G ++Y +V L +DL+ +
Sbjct: 213 DVKAVLERIAPTPQDVFLSFLPLSHTFERTGGYYLPMASGSCVVYARSVAQLAEDLKNVR 272
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P ++SVP +YE +++ + + + S +++ A ++ FC +
Sbjct: 273 PTVLVSVPRIYERVHAKLIETLSPSP----------LKMQLFQAAQAVGWKRFCAAQRLP 322
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
P A W R A+ WP L LV K + + G + VSGG L I
Sbjct: 323 APQDDGA---GGWMR---ALPWP---LLRALVAKPLLAQFGGRVRVAVSGGAPLSPTIAH 373
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
+ +G+++ GYG+TE+SPV++ N +VG + E++I G
Sbjct: 374 CFLGLGLQLVQGYGMTETSPVVSVNTLEDNDPSTVGRALPGVEVRI-----------GEN 422
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
++VRG VM+GY+K P T + + DGWL TGD I GR R + GR
Sbjct: 423 RELQVRGPIVMKGYWKRPEDTARTVSADGWLGTGDQAEIV----DGRIR-------ILGR 471
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ IV STGE V P +LE A +L Q V+G+ + + V EE A +L
Sbjct: 472 IKEIIVTSTGEKVPPADLELAITADALFEQAFVVGEQRPFIACVAVVHAEEWRQLAGQLG 531
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 635
+ D + L+ + K + P +H+V EP+T+
Sbjct: 532 LDANDPASLAHPSAQRAALARIEKLAAGFPRYAVPRAVHLVREPWTIE 579
>gi|221066952|ref|ZP_03543057.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220711975|gb|EED67343.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 648
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 168/625 (26%), Positives = 283/625 (45%), Gaps = 69/625 (11%)
Query: 35 VATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGV----------KPEEKLSLFSDN 84
+A R+ + +R F ES + L++AE + + + ++++ N
Sbjct: 31 LAMRVSATPSAEAYRAFDESSNVWKSLNWAETAQRVALWSRALCASNLPAGARVAILLPN 90
Query: 85 SCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSK 144
+ DQ L G + V + ++ + +I S + L V + + + +I T
Sbjct: 91 GFDAMTIDQACLRCGYVPVPLHAIDNAGSIAYILADSGASLLVVADAKAWQKICATGQEL 150
Query: 145 AAMRFIILLW----GKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY- 199
++ +I + SS +P E+ + + + L R+ S A + Y
Sbjct: 151 PELQAVIHAQQGRTNESSSASPIPAEQA---AQESVKTLQRKPLIVLSAWLQAGQRYTSA 207
Query: 200 --ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 257
E +A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H
Sbjct: 208 LPEPPDKTQLAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSH 267
Query: 258 VYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 315
+ER GY++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S
Sbjct: 268 TFERTAGYYLAIATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASS 327
Query: 316 SAARRVVARALIRISFAYTAFKRI--YEGFCLTRN-QKQPSYLVALIDWLWARIICAILW 372
S R++ A+ + +KR +G L+ Q S+ AL WL ++ L
Sbjct: 328 SLKRKLFEAAVNK------GWKRFCARQGIPLSEQLDAQASWASALPAWLLRSLVAQPL- 380
Query: 373 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 432
L +L + VSGG L I + +G+ + GYG+TE++PV++
Sbjct: 381 -LAQFGGRL------------RVAVSGGAPLSPTIARCFLGLGLPMLQGYGMTETAPVVS 427
Query: 433 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 492
A N +VG + E++I D + ++V G VM+GY+ P T +
Sbjct: 428 ANGLDDNWPDTVGRVLPGIEVRIGDDQE-----------LQVSGPVVMRGYWNRPEDTAK 476
Query: 493 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 552
A DGWL TGD I GR R ++GR K+ IV STGE V P ++E+A L
Sbjct: 477 AFTADGWLRTGDQAAI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAIL 525
Query: 553 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 612
L Q+ V+G+D+ I V + E + A+ + + DAS L +
Sbjct: 526 VDPLFEQVFVVGEDRPFIACIAVVSQMEWEVLARSVGLNPDDASSLHHAAAEREALARIE 585
Query: 613 KWTSKCSFQIGP--IHVVDEPFTVN 635
K T + P IH+V + ++++
Sbjct: 586 KQTRSFARYAVPRAIHLVRDSWSID 610
>gi|189464499|ref|ZP_03013284.1| hypothetical protein BACINT_00841 [Bacteroides intestinalis DSM
17393]
gi|189438289|gb|EDV07274.1| AMP-binding enzyme [Bacteroides intestinalis DSM 17393]
Length = 604
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 268/589 (45%), Gaps = 64/589 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + A L +GV+ EE + +FS N L D G A A+ + + SS +
Sbjct: 42 NQFSQTVRQVANALIELGVQEEENIGIFSQNKPECLYVDFGAFANRAVTIPLYATSSPAQ 101
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ + V ++ +++ +I+ +V D + ++ +
Sbjct: 102 AQYIINDAQIRYIFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVRDPRDMTSIY-F 157
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
DE ++ G+ N+ + DD+A +YTSGTTG PKGVML H N +
Sbjct: 158 DEFLETGK------GLPNNDIVEERTSRASDDDLANILYTSGTTGEPKGVMLHHSNYMEA 211
Query: 234 IRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 290
R ++DI + D+ +SM LP HV+E+A Y +G+++ + +++ ++ +
Sbjct: 212 FR-IHDIRLVDMTDQDVSMNFLPLTHVFEKAWTYLCIHKGVQICINLRPVDIQTTIKEIR 270
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M SVP +E +Y+G+Q++I + ++ + I++ +I+ L + +
Sbjct: 271 PTLMCSVPRFWEKVYAGVQEKIAQETGLKKAMMLDAIKVG-------KIHNIDYLRKGKT 323
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 408
P L++ L + EK VY ++ IGI + G ++P I
Sbjct: 324 PP-----LMNQLKYK-----------FYEKTVYALLKKTIGIENGNFFPTAGAAVPDEIC 367
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+L
Sbjct: 368 EFVHSVGINMLVGYGLTESTATVSCFLNEGYEIGSVGTIMPDVEVKI--GEENEIL---- 421
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+RG + +GY+K AT A+D+DGW +TGD G++ G L L
Sbjct: 422 -----LRGKTITKGYYKKAEATAAAIDKDGWFHTGDAGYLK-----------GDQLYLTE 465
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R KD S G+ V P LE I QI +I ++ A+IVP V AK
Sbjct: 466 RIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEK 525
Query: 589 SIVHADASELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
I + + EL + K I L + + + Q+ ++ EPF++
Sbjct: 526 GIEYKNMEELLQHPKVIGLFRARIDTLQQQFAHYEQVKRFTLLPEPFSM 574
>gi|158523016|ref|YP_001530886.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
gi|158511842|gb|ABW68809.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
Length = 607
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 148/575 (25%), Positives = 272/575 (47%), Gaps = 66/575 (11%)
Query: 41 ISRRNHRFRVFCESKLEQEILDFAEGLRV----IGVKPEEKLSLFSDNSCRWLVADQGML 96
++ RN F ++ + QE D A + +G++ +++++ DN W++ D G+
Sbjct: 33 VAMRNKDFGLWHDISW-QEYYDTARAIACALVDMGLEKGDRVAIIGDNCPEWVMIDMGIQ 91
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
G + V + ++ +E+ ++ NH+E+ VEN E ++ + +++ +I+ W
Sbjct: 92 CAGGVAVGIYTTNAWQEVEYVINHAEARFFFVENEEQLDKWLSFRENAPSLKKVIV-WDT 150
Query: 157 KSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGT 216
K + V +YD ++ GR A D+ A + +D+ +YTSGT
Sbjct: 151 KGLRE---FSDPMVMAYDRLVKAGRAMDTAVVDARMAE-------LRPEDLCVLIYTSGT 200
Query: 217 TGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELM 275
TG PKG MLTH N+ ++ +N D+ LS LP H++ER F R G +
Sbjct: 201 TGMPKGAMLTHGNVTWMAHAIEQQNRIDNKDEVLSFLPLCHIFERLFSVFAHIRHGYVVN 260
Query: 276 YTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
+ + + +++Q P +VP ++E YSGI+ ++ ++ +++ +A + I
Sbjct: 261 FVEKPDTVMENMQEVSPTVGYAVPRIWEKYYSGIRIRMTDATWVKKLAFKAALAIGHKRA 320
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
K +E K P YL +L+ + A V++K++ +G +
Sbjct: 321 TLKMNFE--------KVPLYL-------------EVLFNIGYFA---VFRKLKKRLGFDR 356
Query: 395 AGVSGGGSLPMHIDLF--YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 452
V+ G+ P+ ++ Y+AIGV++ GYG TE + V + G+VG P+ +
Sbjct: 357 LRVAYSGAAPISPEMLRAYQAIGVRLIEGYGQTEGTGVTCTSQLERVKFGTVGRPLPGCQ 416
Query: 453 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 512
++I AE E+L V+ V GYFK+ AT++AL +DGWL +GD+G +
Sbjct: 417 VRI--AEDGEIL---------VKSPGVFVGYFKDEKATQEAL-QDGWLYSGDVGVL---- 460
Query: 513 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 572
G L + R KD I+ + G+N+ P +E S I VVIG ++ +
Sbjct: 461 ------DSDGFLKITDRKKDIIITAGGKNITPQYIENKLKASPYINDAVVIGDRRKYLTS 514
Query: 573 IIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 607
+I+ D++ V+ A+ I + +L++ I L
Sbjct: 515 LIMLDEDNVMKFAQDNKIPFSTYGDLTQNSQIKQL 549
>gi|440229441|ref|YP_007343234.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
gi|440051146|gb|AGB81049.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
Length = 599
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 252/556 (45%), Gaps = 65/556 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A L +GV+ +E++++F++NS W + D +L A++V + ++ + + N ++
Sbjct: 51 ASALLALGVEVQERVAIFANNSMAWSLTDLAILQLRAVSVPLYATHTAAQAAFVLNDADI 110
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIV--EEIPVFSYDEIIDLGR 181
L V + + M I L G +A IV E + + + L +
Sbjct: 111 RILFVGD-------------QTQMDAAIALRGVCPQLAKIIVFNEAVDLHGCEIACYLNQ 157
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
R A A+ + D+ T +YTSGTTG PKGVML ++N+ Q+ D +
Sbjct: 158 LERDADVKRYQAQLDERINGCELQDLFTLIYTSGTTGEPKGVMLDYRNMAAQLCQHDDRL 217
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLV 300
D LS LP HV+ERA +FI G + ++ + +++ + +P M +VP
Sbjct: 218 TVGEEDVSLSFLPLSHVFERAWSFFIMHSGAQNVFLPNTDWVREAMTAVRPTVMCAVPRF 277
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE ++S + +++ + RR++ R I C R Q
Sbjct: 278 YEKIFSAVHEKVARAPWWRRLLFRWAIG---------------CGERKFLQER------- 315
Query: 361 WLWARIICAILWPL-HLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKV 418
A C L L H A+KLV K++ +G + + G L ++ LF++A+GV +
Sbjct: 316 ---AGTPCGRLSALTHRWADKLVLSKLRGLLGGRVRFLPAAGAKLDDNVILFFQALGVNI 372
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
+ GYG+TE+ ++ GS+G P+ E++I AE NE ++VRG
Sbjct: 373 KYGYGMTETCATVSCWEEHDFRFGSIGKPLPDVEVRI--AEENE---------IQVRGPV 421
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
VM+GYF P T Q DGWL TGD G + G L + R KD + S
Sbjct: 422 VMRGYFNKPLETAQTFTADGWLKTGDAGAVDEQ----------GNLFITERLKDLMKTSG 471
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G+ + P LE + I Q+ VI ++ A+IVP E + AK L++ + D EL
Sbjct: 472 GKYIAPQMLEGTLAQDRFIEQVAVIADARKFVSALIVPCFESLEEYAKSLNLKYHDRLEL 531
Query: 599 SKE-KTISLLYGELRK 613
+ + I + LR+
Sbjct: 532 LRHSQIIEMFEARLRE 547
>gi|226328341|ref|ZP_03803859.1| hypothetical protein PROPEN_02235 [Proteus penneri ATCC 35198]
gi|225203074|gb|EEG85428.1| AMP-binding enzyme [Proteus penneri ATCC 35198]
Length = 601
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 259/565 (45%), Gaps = 75/565 (13%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
+E++ + L +GV +E + +FS N+ W +AD L A+ V + SS E+
Sbjct: 45 VEKKTHALSNALLEMGVDVQENIGIFSQNTIDWSLADIASLQLRAVTVPLYATSSVEQAT 104
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
+I N + L V + + ++ +E L ++ P + E + VF+ D
Sbjct: 105 YILNDANIRILFVGDQKQYDIASELL-----------------ALCPQL-EHVIVFNSDV 146
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETI--------GSDDIATYVYTSGTTGNPKGVMLTH 227
+++ S + + + H++++ + DD+ T +YTSGTTG PKGVML +
Sbjct: 147 VLNANTPS--CYLEDLINQTHFQHDDVLKQRINECSLDDLFTLIYTSGTTGEPKGVMLDY 204
Query: 228 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDL 286
+L Q+ + + + D L LP HV+ERA +++ G + + T +++ +
Sbjct: 205 TSLASQLYLHDERLSLSDKDVSLCFLPLSHVFERAWSFYVMHTGAVNVYLTDTHAVREAM 264
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
+P M +VP YE +YS IQ ++ +S R+++ + I+ KR
Sbjct: 265 SEVKPTVMCAVPRFYEKVYSAIQDKVSQASVFRQLIFKWAIK-----QGEKRREAQL--- 316
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPM 405
NQ+Q ++ L C + A+K V ++ +G + + G L
Sbjct: 317 -NQRQQGFISRL---------C------YRFADKKVLNPLRQILGGRVRFLPAAGARLDD 360
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
+ F+ A G+ ++ GYG+TE+ ++ LGS+G P+ E++I
Sbjct: 361 AVIRFFLATGINIKYGYGMTETCATVSCWEENKYKLGSIGTPLPGIEVRI---------- 410
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G++ ++VRGS VM+GYF P T A EDGWL TGD G + G+L
Sbjct: 411 -GAENEIQVRGSIVMKGYFNKPEDTAAAFTEDGWLRTGDAGALDS----------DGMLF 459
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ R KD + S G+ + P +E + I I VI ++ A+IVP + + A
Sbjct: 460 ITERLKDLMKTSNGKYIAPQMIEGTLGQDRFIEHIAVIADTRKFVSALIVPCFDALEEHA 519
Query: 586 KRLSIVHADASELSKEKTISLLYGE 610
+ L++ + D EL + I L+ E
Sbjct: 520 RALNLKYHDRIELLRHTKIKELFDE 544
>gi|94969108|ref|YP_591156.1| AMP-dependent synthetase/ligase [Candidatus Koribacter versatilis
Ellin345]
gi|94551158|gb|ABF41082.1| AMP-dependent synthetase and ligase [Candidatus Koribacter
versatilis Ellin345]
Length = 598
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 149/589 (25%), Positives = 271/589 (46%), Gaps = 80/589 (13%)
Query: 31 CVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLV 90
VD +++ R ++ +L + ++ A L++ GVK +++++ S+N W +
Sbjct: 15 VVDRQLSQVMAYREGANWKYISSQELYRRVVATARWLQLQGVKKGDRVAILSENRPEWAI 74
Query: 91 ADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFI 150
AD +LA GA+ V + + E + ++ S + + + ++ + ++ ++ +
Sbjct: 75 ADFAVLAIGAVVVPIYATLTPEHISYLLKDSGTRVIFLSTRTQLQKV-RAIEAQTPLQHV 133
Query: 151 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 210
+++ + P+ + I + G E R A D+ +++ SDD+AT
Sbjct: 134 VMM---DEVIPPEAI------WMQTITESGTEGRDAGFDATA-------KSLQSDDLATL 177
Query: 211 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIF 268
VYTSGTTGN KG ++TH N+ + + A E G + +S LP H+ R Y +F
Sbjct: 178 VYTSGTTGNSKGAIITHGNMAANLSCSLEGFAALREGGHRLISFLPLSHITARHLDYQMF 237
Query: 269 SRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G+ L Y V + ++ +P ++VP VYE + + +
Sbjct: 238 HHGVMLAYCPNVDMITALMKEIRPTIFVAVPRVYEKIST-------------------TV 278
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVA----LIDWLWARIICAILWPLHLLAEKLVY 383
++ A K+IY+ + Q + LV +DW LA KL++
Sbjct: 279 KMKAAEGIKKKIYDWAMRVGAKHQATILVGNTPTSLDWK--------------LANKLLF 324
Query: 384 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 442
K++ A+G + +SGG L + +Y + G+++ GYGLTE+SPVIA P + LG
Sbjct: 325 SKVREAMGGEVQFFISGGAPLGRELAEWYASFGIRIHEGYGLTETSPVIALNNPKNHRLG 384
Query: 443 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 502
+VG +++ E+KI S G + VRG V +GY+ P+ T QA E W T
Sbjct: 385 TVGPLLSNVEVKI-----------ASDGEILVRGPSVFKGYWNMPTETTQAF-EGEWFKT 432
Query: 503 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 562
GDIG H G G L + R KD I S G+ + P +E + ++ + +
Sbjct: 433 GDIG-----HLDGE-----GFLSITDRKKDLIKTSGGKFIAPQPIEGSLKVHPMVAEAAM 482
Query: 563 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 611
+G+ +R P +I+P+ + AK+ ++ +L + + LY ++
Sbjct: 483 VGEKRRFPAVMILPNFPLLEEWAKKNAVSFDGRDQLVTDPKVIELYTQI 531
>gi|160895477|ref|YP_001561059.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160361061|gb|ABX32674.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 611
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 149/565 (26%), Positives = 268/565 (47%), Gaps = 58/565 (10%)
Query: 39 IRISRRNHRFRVFCES---KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGM 95
+R++ R F ++ + + + F GL +G+ P + + S+N W++A G
Sbjct: 22 LRVAIRQKDFGIWKPTSWARYHERASHFGLGLAQLGLPPGGHMGVISENRIEWVLAQMGA 81
Query: 96 LATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG 155
GAI V S + E+ ++ H++ + E+ E +++ L ++ II++
Sbjct: 82 GLIGAITVGVYPTSPTPEVAYVAGHADVDIMVCEDQEQTDKLLAALPQLPRLKKIIVMET 141
Query: 156 KK-SSVAPDIVEEIPVFSYDEIIDLGRES-RKAFSDSNDARKHYKYETIGSDDIATYVYT 213
K S AP++ I F DE+ LG ++ +A + AR+ DD+ +YT
Sbjct: 142 KGLRSFAPEVRALIATF--DEVERLGAQAASRAPIEQALARQTL-------DDVGLMIYT 192
Query: 214 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGI 272
SG+TG PKG M+T++N+ + + + + + G + LS LP HV E+ F+ G
Sbjct: 193 SGSTGKPKGAMITYRNIRGVVPGIAERLGLDGGTRHLSYLPLCHVAEQMLTSFVPVYLGS 252
Query: 273 ELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
++ + ++R +++DL+ P+ + VP ++E L++ I ++ + RR AL R +
Sbjct: 253 QVHFGESIRTVQEDLREVAPNMFLGVPRIWEKLHAAISIKMQETGPLRR----ALYRRAM 308
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
A A L ++ L + W A W V + +Q+ IG
Sbjct: 309 AACA--------PLAEKPRRQWSLAERLAW------AASYWS--------VLRALQNFIG 346
Query: 392 ISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 449
+ +A V+ G+ P+ D+ F+ +GV + YGLTES+ ++ R +GSVG
Sbjct: 347 LREARVALTGAAPIPPDVVRFFRTLGVPLIEVYGLTESTGMVTGHRLDDVAVGSVGVATE 406
Query: 450 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 509
+ +I G + ++G V GY+KNP AT Q+L +DGWL+TGD+
Sbjct: 407 GVQWRIASHGGQPGDEGDGSGELLIKGDMVFAGYYKNPEATAQSL-QDGWLHTGDV---- 461
Query: 510 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 569
R GG L + R KD ++ + G+N+ P E+E S I++ +V+ + ++
Sbjct: 462 -------VRVQGGQLRIVDRLKDIMITAGGKNLTPSEIENTMKASPFIKECIVVAEGRKF 514
Query: 570 PGAIIVPDKEEV--LMAAKRLSIVH 592
GA++ D E V A+R+ H
Sbjct: 515 VGALVQIDYETVGQWAQARRIPFTH 539
>gi|194226532|ref|XP_001491142.2| PREDICTED: long-chain-fatty-acid--CoA ligase 1 [Equus caballus]
Length = 698
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 243/548 (44%), Gaps = 80/548 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
PE + +F+ N W++ +QG A + V +E + +I N +E + V+ P+
Sbjct: 146 PETFVGIFAQNRPEWVIIEQGCFAYSLVVVPLYDTLGTEAITYIVNKAELSLVFVDKPDK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
N + E + +K ++ I+L+ S D++E + + S+ + DLGR +R+
Sbjct: 206 ANLLLEGVENKLTPGLKIIVLM----DSFDVDLLERGKKCGVEILSFKAMEDLGRANRQ- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----- 241
K + +D+A +TSGTTGNPKG M+TH+N++ + +
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKMTETAFR 309
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 310 PCPD-DTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTVFPVVPR 368
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 369 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSCIIRN 408
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVK 417
+ LW +KL++ KIQS++G + V+G + + F A +G +
Sbjct: 409 NSLW---------------DKLIFHKIQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQ 453
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + P G VG P+ +K+VD E L A +G + V+G
Sbjct: 454 FYEGYGQTECTAGCCLTIPGDWTAGHVGAPMPCNLVKLVDVEEMNYLAAKGEGEICVKGP 513
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V QGY K+P T + LD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 514 NVFQGYLKDPEKTAEVLDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 563
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GE + P ++E LRS + Q+ V G+ Q AI+VPD E + A++
Sbjct: 564 QGEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLIAIVVPDAETIGHWARKKGF-EGSFE 622
Query: 597 ELSKEKTI 604
EL + K +
Sbjct: 623 ELCRNKDV 630
>gi|387128044|ref|YP_006296649.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
gi|386275106|gb|AFI85004.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
Length = 604
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 161/596 (27%), Positives = 268/596 (44%), Gaps = 90/596 (15%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
++ EI + + L+ ++ +++++ NS W+ D L+ G I V + +
Sbjct: 50 QVADEITHWQQALQQENLRKGDRVAINLRNSKEWIFFDLAALSLGLIVVPLYPDDRPDNV 109
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
+I ++ L V + ++ I L + A++ I+L +D
Sbjct: 110 AYILQDADVRLLLVNSLRQWSAIKAVLPEEHAVKRIVLF-------------------HD 150
Query: 175 EIIDLGRESRKAFSDSND--ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL- 231
E I S + + D + + +A+ +YTSGTTG KGVML+H N+L
Sbjct: 151 ESITDNESSMTSLQNWLDTASAAELNLPHCAPEQLASIIYTSGTTGRSKGVMLSHHNMLS 210
Query: 232 --HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF---------IFSRGIELMYTAVR 280
+ ++I+P D FLS LP H ER GY+ +FSR I L
Sbjct: 211 VAYGSLQFFEILP---DDVFLSFLPLSHTLERTGGYYLPMMAGSKVVFSRSIPL------ 261
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
L DD+++ QP MI+VP ++E +Y + KQ+ S +R + + + + +KR
Sbjct: 262 -LADDMRQVQPTIMIAVPRIFERIYDRVHKQLAEGSWLKRRIFKLAVEV-----GWKR-- 313
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGG 400
F + +K S + L LL + +V K Q G + VSGG
Sbjct: 314 --FQYQQGRKYWSPSLLLW---------------PLLYKLVVTKFHQRLGGKLRLAVSGG 356
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
+LP+H + + + + GYGLTE+SPVI+ P+ N SVG I E++I
Sbjct: 357 AALPVHAAKMFIGLDLVLLQGYGLTETSPVISVNEPSSNDPASVGRAIQGVEVRI----- 411
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
G ++V+G M GY+ N AT Q +D DGWL+TGD I+
Sbjct: 412 ------GKDEELEVKGPGNMLGYWNNHKATAQTIDADGWLHTGDKAHISE---------- 455
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G + + GR KD +VL+ GE V P ++E A + + LI Q +V+G+ Q A++V + E
Sbjct: 456 SGHIYIVGRIKDILVLNNGEKVPPADIEAAIVSNGLIDQALVVGEGQPYLAALLVINGES 515
Query: 581 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK--CSFQIGPIHVVDEPFTV 634
A++L + L + LR+W + +I +H+ +P+T+
Sbjct: 516 WPQIAQQLGLDPLQNESLGSKVLQQHFVRLLRQWLFEFPAYARIRRVHLTLQPWTI 571
>gi|410088659|ref|ZP_11285349.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii SC01]
gi|455740222|ref|YP_007506488.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii subsp.
morganii KT]
gi|409764905|gb|EKN49030.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii SC01]
gi|455421785|gb|AGG32115.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii subsp.
morganii KT]
Length = 602
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 252/549 (45%), Gaps = 58/549 (10%)
Query: 62 DFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHS 121
+ AE L GV+ +E +++FS NS W + D +L AI V + SS ++ +I N +
Sbjct: 51 NLAEALLAEGVEVQENVAVFSHNSALWTLTDLAILQCRAIVVPLYATSSDDQAAYILNDA 110
Query: 122 ESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR 181
+ L V+ + IA +L S I++ +++ P S+ + L R
Sbjct: 111 QVRILFVDGQKQ-AEIALSLLSLCPSLQKIIIMNPENTAIP---------SHPAVCTL-R 159
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
+ S A + DD+ T +YTSGTTG PKGVML ++N+ Q+ + +
Sbjct: 160 QFMNGHDGSYAAELRQRIADCSLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDERL 219
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLV 300
D L LP HV+ERA +++ G +Y + NL + + +P M +VP
Sbjct: 220 TLTEDDVSLCFLPLTHVFERAWSFYVMHTGALNVYLSDTNLVRKAMVSVKPTVMCAVPRF 279
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE ++SGI +++ + +R + +R K+ + R +KQ
Sbjct: 280 YEKVFSGIYEKVAQAPWYKRALFHWAVRTG------KKTLDA--QQRGEKQ--------S 323
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQ 419
WL AR A+K V K++ +G + + + G L I F+ AIG+ ++
Sbjct: 324 WLAARC--------DQFAQKKVLGKLRDVLGGNVRFLPAAGARLDDEIIRFFLAIGINIK 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE+ ++ + LGS+G P+ E++I E NE ++VRG V
Sbjct: 376 YGYGMTETCATVSCWENSGYQLGSIGVPLPDVEVRI--GEENE---------IQVRGPVV 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GY+ P T+QA DGWL TGD G + G L + R KD + S G
Sbjct: 425 MRGYYNKPEETRQAFTADGWLRTGDAGALDEQ----------GNLFITERLKDLMKTSNG 474
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P LE + I I V+ ++ A+IVP + + A+ L++ + D EL
Sbjct: 475 KYIAPQMLEGTLGQDRFIEHIAVVADARKFVSALIVPCFDTLEEHARALNLKYHDRMELL 534
Query: 600 KEKTISLLY 608
K I L+
Sbjct: 535 KNSQIVALF 543
>gi|409199179|ref|ZP_11227842.1| long-chain acyl-CoA synthetase [Marinilabilia salmonicolor JCM
21150]
Length = 586
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 248/525 (47%), Gaps = 61/525 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++L +++ GL V+G +P + + + S N WL+ D G++A + V + SS ++
Sbjct: 28 NQLGEKVEQALSGLHVLGSRPGDNVGIISQNRAEWLLTDLGIMANRGVTVPLYATSSMDQ 87
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I N +E L V E + L + +++ + + D + S+
Sbjct: 88 IRYILNETEIRILFVGTCEQKEMLKCLLDEDNTLEQMVVF--DECNTVDD-----RILSF 140
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
++L ++ S S++ ++ SDD+AT +Y+SGTTG PKGVML H + ++
Sbjct: 141 SSFLELSQKKGLHISISDNVSDYH------SDDLATIIYSSGTTGEPKGVMLKHSHFVNA 194
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPH 292
+ + + + D LS LP HV+ER + +FSR I + R++ + L++ +P
Sbjct: 195 WKIHQERLEVSSEDVSLSFLPLSHVFERLWTHLMLFSRVINVFLDDPRDVVNALRQVKPT 254
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M VP ++ Y GIQ+++ S ++ + I ++ +R+ + P
Sbjct: 255 MMCVVPRFFDKTYQGIQEEMLRWSPIKQKIFNWAITTGLKANKYR--------SRHAELP 306
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
L W A +EKLV++K++ G + + G +L I F+
Sbjct: 307 RTL----QWKLA------------FSEKLVFRKLRGVFGGNIRFMPCAGAALSTEILKFF 350
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
A G+ V GYGLTE+S ++ R G+ G + E+KI D +E+L
Sbjct: 351 HAFGLFVTYGYGLTETSATVSCFRDDVYSYGTCGSVMPGVEVKIGD--NSEIL------- 401
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG+ V GY+K T++ + DGW +TGD G + + G L++ R K
Sbjct: 402 --VRGASVFSGYYKKEKETQEVM-TDGWFHTGDEGMLDEN----------GDLIMTDRIK 448
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 576
D + S G+ V P ++E + L+ QIVV+G ++ A+IVP
Sbjct: 449 DLMKTSVGKYVSPQKIETLLQQQELVEQIVVVGDNRPYVTALIVP 493
>gi|399051065|ref|ZP_10741035.1| AMP-forming long-chain acyl-CoA synthetase [Brevibacillus sp.
CF112]
gi|398051232|gb|EJL43566.1| AMP-forming long-chain acyl-CoA synthetase [Brevibacillus sp.
CF112]
Length = 640
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 272/577 (47%), Gaps = 65/577 (11%)
Query: 40 RISRRNHRFRVFCE---SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
+ + R + ++ E +L +E+ + GLR +G +KL++ DN W++A+
Sbjct: 20 KTAMRQKKLGIWQELTWRQLSEEVKALSSGLRELGFSRGDKLAIIGDNRPEWVMAEAAAQ 79
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
A G ++V S +E+ +I NHS++ + VE+ E +++ E + + I+ +
Sbjct: 80 ALGGVSVGLYQDSLPKEIAYILNHSDAKIVVVEDQEQVDKLLE-IADELPFVQKIVFYKD 138
Query: 157 KSSVAPDIVEEIPVFS-YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
K D P+ S + ++ LGR+ A+ S + + + ++ +DIA YT+G
Sbjct: 139 KGMRGYDH----PLLSPFRDVQQLGRQC--AYYASGEWEREVEQGSV--EDIAILCYTAG 190
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER---ACGYFIFSRGI 272
TTG PKG ML+H+NLLH SL+ I P + D+++S LP + E+ G F+ +
Sbjct: 191 TTGPPKGAMLSHRNLLHMTESLFSIDPVDVSDEYVSFLPLAWIGEQMMSVSGAFLAGYTV 250
Query: 273 ELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
++ DL+ PH + S P ++E + S +Q ++ + +R V
Sbjct: 251 NFP-EDTSTVQADLREIGPHLIFSPPRIWEDMVSRVQVKLQDAGWLKRSV---------- 299
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
YE F K + + +W R++ A L + LV+ I+ +G+
Sbjct: 300 -------YEWFRPYGEAKAQAAITGGRLTVWQRVMYA-------LGDYLVFSAIKDHLGL 345
Query: 393 S--KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K +GG +L + F++++GV ++ YG TE S + A R +VG P+
Sbjct: 346 LRIKRAYTGGAALGADVSRFFQSLGVNLKQIYGQTEVSGIAAVHRDGKIRPDTVGEPLPG 405
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
TEI + D KG + ++ V GY+KN AT+ L GWL TGD+G+
Sbjct: 406 TEINVSD-----------KGEIWIKSPSVFAGYYKNERATEAVL-VGGWLRTGDVGY--- 450
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ G ++VL+ R +D I L E V P +E S I++++ IG D+
Sbjct: 451 ------TDESGQLVVLD-RLQDVIRLDNDELVSPQLIENKLKFSPYIKEVMAIGTDRPYV 503
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 607
AI+ D V A+ + + S+L++++ + LL
Sbjct: 504 TAILNIDMANVGRYAELNQVAYTTYSDLAQKQEVLLL 540
>gi|429731164|ref|ZP_19265804.1| AMP-binding enzyme [Corynebacterium durum F0235]
gi|429146317|gb|EKX89374.1| AMP-binding enzyme [Corynebacterium durum F0235]
Length = 638
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 244/558 (43%), Gaps = 77/558 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ + A+GL GV ++++L S+ W + D + A GA+ V SS ++ I
Sbjct: 81 DEVFEVAKGLIANGVTQGDRVALLSETRYEWSLLDFAIWAAGAVTVPIYGSSSLSQVEWI 140
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
S V E PE + + + K V IP +
Sbjct: 141 IEDSGVVFAVTETPEHTDMVKRLELDTEGRPSLKGSSSKLRRVLEINASAIPTLKF---- 196
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
E R D AR + S D+A+ VYTSGTTG PKG LTH N L Q+R+L
Sbjct: 197 ----EGRGISDDEVRAR----IDATDSSDLASLVYTSGTTGRPKGCRLTHHNWLAQVRAL 248
Query: 238 YD------IVPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQ 290
VP G + L+ LP HV RA + G + ++ +L + QR +
Sbjct: 249 LTHPIGAIAVP---GTRVLTFLPLAHVLSRAVSLAVAIGGATQSHWSDFSSLSVEFQRAR 305
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P+ ++ VP V+E + +G + R R++ Y+ EG
Sbjct: 306 PNMILGVPRVFEKVRNGAAANAQDNGPLRAAAFAQAERVAQDYSRALDTPEG-------- 357
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
PS + + H + +KLVY KI++A+G S K +SGG ++ +
Sbjct: 358 -PSRALRM---------------KHAMFDKLVYSKIRAAMGASVKYCISGGSAMSPDLLH 401
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ +GV V GYGLTE++ AA NV+GSVG P+ +I D
Sbjct: 402 FFRGMGVTVYEGYGLTETTAA-AAVNFDDNVIGSVGRPVGGMSARIND-----------D 449
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G + +RG + GY+ N AT + +D++GW NTGD+G + G +V+ GR
Sbjct: 450 GEILLRGETLFDGYWNNSEATAENIDQEGWFNTGDLGELLD----------SGHIVITGR 499
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD IV + G+NV P LE+ LI Q +V+G + G +I D+ A KR
Sbjct: 500 KKDLIVTAGGKNVSPGPLEDRLRSHPLISQALVVGDGKPYVGVLIALDE----AALKRWK 555
Query: 590 IVHADASELSKEKTISLL 607
+ H + + +T+S L
Sbjct: 556 LTH----NIPESRTVSEL 569
>gi|395839940|ref|XP_003792829.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Otolemur
garnettii]
Length = 698
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 149/532 (28%), Positives = 242/532 (45%), Gaps = 81/532 (15%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVVVPLYDTLGTEAITYIVNKAELSLIFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + V S + DLGR +R+
Sbjct: 206 ARLLLEGIENKLTPCLKIIVLM----DTFGSELVERGKKCGVEVTSMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-----IV 241
K + +D+A +TSGTTGNPKG M+TH+N++ + ++
Sbjct: 261 -----------KPKPPAPEDLAVVCFTSGTTGNPKGAMITHQNVVSDCSAFVKMTENTVI 309
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P+ + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 310 PSPD-DILISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPR 368
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 369 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRN 408
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGV 416
+ LW +KL++ KIQS++G K + G+ P+ + A+G
Sbjct: 409 NSLW---------------DKLIFHKIQSSLG-GKVRLMVTGAAPVSATVLTFLRAALGC 452
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 453 QFYEGYGQTECTAGCCLTVPGDWTAGHVGAPMPCNFIKLVDVEEMNYMAAKGEGEVCVKG 512
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
+ V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L
Sbjct: 513 ANVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKL 562
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKR 587
+ GE + P ++E LRS I Q+ V G+ Q AI+VPD E + A++
Sbjct: 563 AQGEYIAPEKIENIYLRSEPIAQVFVHGESLQAFLIAIVVPDVETLSSWAQK 614
>gi|415727094|ref|ZP_11471322.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis
00703Dmash]
gi|415729552|ref|ZP_11472578.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 6119V5]
gi|388062823|gb|EIK85428.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis
00703Dmash]
gi|388064586|gb|EIK87120.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 6119V5]
Length = 603
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 145/546 (26%), Positives = 248/546 (45%), Gaps = 89/546 (16%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ + + ++ A+G GV P + +S+ + S +W V D +++ GA+ V
Sbjct: 44 WKSYSAKEFRDMVVAVAKGFIARGVMPGDSISIIAHTSWQWTVLDMAIMSIGALTVPIYE 103
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRI--AETLCSKAAMRFIILLWGKKSSVAPDIV 165
SSS ++ HI S+ ++ VE+ + +I + CS ++I + ++
Sbjct: 104 TSSSIQIQHIVEDSKVCSIFVESADMLPKIEAVKDDCSTLHDVYVI----NRGAL----- 154
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
D I+ G+ D+ + + + D+AT VYTSG+TG PKG+ L
Sbjct: 155 --------DAFIEYGKT-------VTDSEFYERVHAVCGSDLATIVYTSGSTGEPKGIEL 199
Query: 226 THKNLLH----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VR 280
TH N + S+ DI N + + LP HV+ R +F F+ + L T+ ++
Sbjct: 200 THSNFAFIAKSGVVSMPDIALKGN-PRLMLFLPLAHVFARFMQFFCFAGNVTLGLTSNLK 258
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ D Q ++P +++ VP ++E +Y +AA + R + FAY A
Sbjct: 259 TVLSDFQTFKPTFILGVPRIFEKIY----------NAASQKAGRGVKGFVFAYAA----- 303
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPL----HLLAEKLVYKKIQSAIGISKA- 395
+ +Q W +++ A++ P+ H L +KLVYK + G S +
Sbjct: 304 ------KVARQ---------WSYSQQSKAMVPPMLALSHALCKKLVYKPLLQVFGGSVSY 348
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
+SGG L M I F+ IG+ + GYG+TE+ T +G+VG P+ + I
Sbjct: 349 AISGGAPLDMSIAHFFNGIGLPLLEGYGMTETCAPAMVNPTTGYRIGTVGLPVKGVSVAI 408
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
D G + ++ V +GY NP T+Q + +GWL+TGD G
Sbjct: 409 AD-----------DGELCIKSPAVCKGYHNNPELTRQQI-VNGWLHTGDFG--------- 447
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
S G + + GR KD I+ + G+N+ P LE + + S ++ Q VVIG + A+I
Sbjct: 448 -SLDDDGFVRITGRKKDLIITAGGKNLSPNALEASLMSSPIVSQAVVIGDRKPFVAALIA 506
Query: 576 PDKEEV 581
D EV
Sbjct: 507 LDLAEV 512
>gi|317493293|ref|ZP_07951715.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918686|gb|EFV40023.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 600
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 160/588 (27%), Positives = 272/588 (46%), Gaps = 84/588 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A L +GV +E++++F+ NS W + D +L AI V S +++ + + N ++
Sbjct: 50 LALALCALGVDVQERVAIFAHNSVSWSLIDLAILHLRAITVPVYSTNTAAQTAFVLNDAD 109
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V+ +N + A+R V P + E I V S D I G E
Sbjct: 110 VRILFVDGQSQYN-------AALALR----------GVCPQL-EHIIVMS-DSIDMQGCE 150
Query: 183 ---SRKAFSDSNDAR----KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
+ +F+ S R + E D+ T +YTSGTTG PKGVML + N+ Q+R
Sbjct: 151 IACTLDSFAASAQERFLPLLKERIEQADMSDLFTLIYTSGTTGEPKGVMLNYTNMGAQLR 210
Query: 236 SLYD---IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQP 291
L+D V AE D L LP HV+ERA +++ G + +Y + N +++ +Q +P
Sbjct: 211 -LHDERLTVTAE--DVSLCFLPLSHVFERAWSFYVMHSGAQNVYLSDTNQVREAMQSVKP 267
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
M +VP YE ++S I +++ + +R + + I + KR F R +
Sbjct: 268 TVMCAVPRFYEKIFSAIHEKVAQAKWHKRAMFKCAI-----WVGEKR----FLTERAGCK 318
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLF 410
P+ +L +H LA+KLV K++ +G + + G L ++ LF
Sbjct: 319 PN---------------VVLSAMHKLADKLVLSKLRGILGGRVRFLPAAGAKLDDNVILF 363
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++A+G ++ GYG+TE+ ++ GS+G P+ E++I G +
Sbjct: 364 FQALGANIKYGYGMTETCATVSCWEENDFRFGSIGKPLPDVEVRI-----------GHEN 412
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
++VRG VM GY+ P T EDGWL TGD G + + G L + R
Sbjct: 413 EIQVRGPIVMCGYYNKPLETAATFTEDGWLKTGDAGALDEN----------GNLFITERL 462
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
KD + S G+ + P +E + I Q+ VI ++ A+IVP E + AK +++
Sbjct: 463 KDLMKTSNGKYIAPQMVEGTLAQDRFIEQVAVIADARKFVSALIVPCFESLEEYAKSINL 522
Query: 591 VHADASELSKEKTISLLYG----ELRKWTSKCSFQIGPIHVVDEPFTV 634
+ D +L + I ++ E++K +K Q+ ++ E F++
Sbjct: 523 KYHDRLDLLRHSHIVEMFDQRLREMQKGLAKFE-QVKRFTLLPEAFSM 569
>gi|444379072|ref|ZP_21178257.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676909|gb|ELT83605.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 598
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 154/583 (26%), Positives = 257/583 (44%), Gaps = 91/583 (15%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
++ + V G+ ++K+ +F++N W +AD L + V +++++ +I
Sbjct: 48 SKAMLVSGLAVQDKIGIFANNCAEWSIADIAALQVRCVPVPIYPTNTADQAAYILR---- 103
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP----VFSYDEIID- 178
A++R + + ++ A I P + S+ E +D
Sbjct: 104 --------------------DASVRILFVGDQSQADAAMSISASCPALEKIVSFAENVDF 143
Query: 179 ----LGRESRKAFSDSNDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLL 231
+G+ +ND + I D+ T +YTSGTTG PKGVML + N+
Sbjct: 144 AGHEMGQSWEMFLQTANDNVEQEMQARIADASMSDLMTLIYTSGTTGEPKGVMLDYANVA 203
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 290
QI S ++ + L+ LP HV+ER +++ G Y + N +++ LQ +
Sbjct: 204 AQIESHDKVLGISENEVSLAFLPLSHVFERCWSFYVLHHGATNCYLSNTNAIREALQEVK 263
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M +VP YE +YS + +++ T+S ++ + RA + I +TR K
Sbjct: 264 PTVMCAVPRFYEKIYSAVHEKVATASPVKKGMFRAAVYIGNLMAE---------ITRKGK 314
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 409
+P+ WL + H +A+KLV K++ +G + + GG L I
Sbjct: 315 KPA------PWLKS---------AHRMADKLVLSKLRQLLGGNITMMPCGGAKLEPTIGR 359
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ AIGV V++GYG+TE++ I+ S+G P+ + E+KI + NE+L
Sbjct: 360 FFHAIGVNVKLGYGMTETTATISCWDSGSFDPDSIGMPMPNAEVKI--GQNNEIL----- 412
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
VRG VM+GY+ T + DG+L TGD G I G L + R
Sbjct: 413 ----VRGPMVMRGYYNKAKETAETFTTDGFLKTGDAGHIDAQ----------GNLFITDR 458
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ + S G+ + P +E + I QI V+ + A+IVP E + AK L+
Sbjct: 459 IKELMKTSGGKYIAPQVIEGKLGKDHFIEQIAVVADARHFVSALIVPCFESLETWAKELN 518
Query: 590 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
I + D EL K EK + L EL K+ F + P
Sbjct: 519 IKYHDRMELIKHSEVVEMFEKRVEELQKELAKFEQVKKFTLLP 561
>gi|365091990|ref|ZP_09329241.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363415727|gb|EHL22853.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 619
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 147/586 (25%), Positives = 270/586 (46%), Gaps = 51/586 (8%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ + + +A+ L + + ++++ N + ADQ LAT + V + +
Sbjct: 47 AQTAERVSTWAQALAAMQLPRAARVAILLPNGLHAMCADQATLATCGVPVPLHAIDNPGS 106
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I E+ L V E + +I A+R +++ ++++ + + +
Sbjct: 107 IAYILADCEASMLIVSQAEQWEKIRTVGTPFPALRAVVVTDADEAAM-------VTLATG 159
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
D+ +G ++ S + A + G DD+A VYTSGTTG PKGVMLTH+N++
Sbjct: 160 DDGPVVGTLAQW-LSGAEHAAALRTWTPPGEDDLAAIVYTSGTTGKPKGVMLTHRNVVSD 218
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQP 291
++++ + + D FLS LP H +ER GY++ + G + Y +V L +DL+ +P
Sbjct: 219 VKAVLERIAPTVDDVFLSFLPLSHTFERTGGYYLPIAAGSCVAYARSVAQLAEDLKTIRP 278
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
++SVP +YE +++ + +++ + ++ A + + FC +
Sbjct: 279 TVLVSVPRIYERIHAKLLEKLSPTP----------WKVQLYEAAQNKGWARFCAAQGLAA 328
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 410
P+ + W + A+ WP + + LV K + + G + VSGG L I
Sbjct: 329 PTPDASSQAAGW---MAALPWP---VLQALVAKPLLAQFGGRVRVAVSGGAPLSPTIAKC 382
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ +G+ + GYG+TE++PV++ N VG + E++I G
Sbjct: 383 FLGLGLPLIQGYGMTETAPVVSVNALDDNDPACVGKALPGVEVRI-----------GDNH 431
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
++VRG VM+GY+K T + L DGWL TGD ++ G + ++GR
Sbjct: 432 ELQVRGPIVMKGYWKRLEDTARILSTDGWLGTGD-----------QADIVNGRIYIKGRI 480
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
K+ IV STGE + P +LE A L L+ Q V+G+++ + V + E A L +
Sbjct: 481 KEIIVTSTGEKIPPGDLELALLADPLLEQAFVVGENRPFIACVAVLNPSEWQRLAADLGL 540
Query: 591 VHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTV 634
A LS + + K T+ + P +H+ P+T+
Sbjct: 541 NPQAADSLSHPSVHRAVLARIEKNTASFARYAVPRTVHLTLTPWTI 586
>gi|238752418|ref|ZP_04613895.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
gi|238709351|gb|EEQ01592.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
Length = 599
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/565 (24%), Positives = 262/565 (46%), Gaps = 75/565 (13%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ + + L +GV +E++ +F++NS W + D +L ++V + +++ +
Sbjct: 41 QQVDTHVTQISAALLSLGVAIQERIGIFANNSMAWSLVDLAILQLRGVSVPLYATNTTAQ 100
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
++ N ++ L V F+ A++ S+ P +++ +
Sbjct: 101 AAYVVNDADVRILFVGGQTQFD---------VAIKL--------KSLCPQLIK---IIVL 140
Query: 174 DEIIDL-GRESRKAFSD---SNDARKHY----KYETIGSDDIATYVYTSGTTGNPKGVML 225
D ++DL G E + +D DA + + + + +D+ T +YTSGTTG PKGVML
Sbjct: 141 DPLVDLRGCEFAQHLADFEQQPDAVQQHLLSARIDACDLNDLFTLIYTSGTTGEPKGVML 200
Query: 226 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKD 284
++N+ Q+ + D LS LP HV+ERA +++ G + +Y + N ++
Sbjct: 201 DYRNMAAQLYLHDQRLTLTTDDISLSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVRP 260
Query: 285 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 344
+Q QP M +VP YE ++S I ++ + R+ + R + FK + +G
Sbjct: 261 AMQAVQPTVMCAVPRFYEKVFSAINDKVALAKWHRQKLFRWAV--GCGERKFKSVQDGQA 318
Query: 345 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-L 403
L+ +Q L+ LA +LV K++ +G + G+ L
Sbjct: 319 LSPLSEQ----------------------LYKLANRLVLSKLRGILGGKVRFLPAAGARL 356
Query: 404 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 463
+I LF++AIG+ ++ GYG+TE+ ++ GS+G P+ E+++
Sbjct: 357 DDNIILFFQAIGINIKYGYGMTETCATVSCWEEKDFRFGSIGKPLPGIEVRL-------- 408
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 523
G++ ++VRG VM+GYF P T ++ EDGWL TGD G + G
Sbjct: 409 ---GAENEIQVRGPIVMRGYFNKPQETAESFTEDGWLKTGDAGALDSQ----------GN 455
Query: 524 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 583
L + R KD + S G+ + P +E + I Q+ +I ++ A+IVP E +
Sbjct: 456 LFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPCFESLEE 515
Query: 584 AAKRLSIVHADASELSKEKTISLLY 608
A+ +++ + D EL + I L+
Sbjct: 516 YARSINLKYHDRFELLRHSHIVSLF 540
>gi|411006956|ref|ZP_11383285.1| long chain fatty acid:CoA ligase [Streptomyces globisporus C-1027]
Length = 629
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 257/582 (44%), Gaps = 63/582 (10%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+ + A GL +GV+PEE+++L S W++ D G++ GA +++EE I
Sbjct: 57 ERVYAIAAGLIALGVQPEERVALSSATRVEWILIDLGVMCAGAATTTIYPSTNAEESAFI 116
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
SES L E+ E + ET + ++++ + V P E P +
Sbjct: 117 LADSESRILIAEDAEQLAKARETRADLPDLAHVVVI--DPAGVEP--AEGDPEGWIITLA 172
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
DL + + + DA + I +D +AT +YTSGTTG PKGV L H N + ++
Sbjct: 173 DLEARGNELLAKTPDAVTE-RVAAITADQLATLIYTSGTTGRPKGVRLPHDNWSYMAKAT 231
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKD----DLQRYQPH 292
D LP HV+ G + S IE+ + TAV D +L QP
Sbjct: 232 VSTGLINADDVQYLWLPLAHVF----GKVLTSGQIEVGHVTAVDGRIDKIIENLPVVQPT 287
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
YM +VP ++E +Y+G+ + A+ + + + Y + + F T P
Sbjct: 288 YMAAVPRIFEKVYNGVASKARAGGGAKYKIFQWAAGVGREYAKVSQ--DNFRRTGKASVP 345
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
L A H +A+ LV+ KI+ A G +A VSG +L I F+
Sbjct: 346 FALGA----------------KHKVADTLVFSKIREAFGGRLRACVSGSAALAPDIGYFF 389
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
GV + GYGLTESS G+VG P+ TE++I D G
Sbjct: 390 AGAGVHILEGYGLTESSAASFVNPGEAYRTGTVGKPLPGTEVRIAD-----------DGE 438
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
+ +RG +MQGY K P T++ L+ DGW +TGDIG ++ G L + R K
Sbjct: 439 ILLRGPGIMQGYHKLPDKTEEVLESDGWFHTGDIGELS----------ADGYLRITDRKK 488
Query: 532 DTIVLSTGENVEPLELE-EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
D I S G+ V P E+E + + I+V G D+ A+I D+ +L A +
Sbjct: 489 DLIKTSGGKYVAPAEVEGQFKAVCPFVSNILVHGADRNFCTALIALDEPTILGWAAENGL 548
Query: 591 VHADASE-LSKEKTISLLYG-------ELRKWTSKCSFQIGP 624
+E ++ +T+ L+ G L++W + F++ P
Sbjct: 549 AGKSYAEVVAAPQTVELIDGYVQRLNEGLQRWQTIKKFRLLP 590
>gi|260775231|ref|ZP_05884129.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608932|gb|EEX35094.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 602
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 259/581 (44%), Gaps = 75/581 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q+I + L G+K ++K+ +F++N +W + D L T A+ V +++ + +I
Sbjct: 43 QQIDALSLALLTHGIKVQDKIGIFANNMPQWTITDFAALQTRAVTVPIYPTNTAAQSSYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
++ L V F+ + ++ + +++ V YD
Sbjct: 103 LQDADVRILFVGEQAQFDAAVSIFEQSPQLELVVAM-----------SDDVDVGDYD--- 148
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSD----DIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
S + F + D + +T +D D+ T +YTSGTTG PKGVML + N+ Q
Sbjct: 149 --FSRSWQQFVFAADKAMQSELDTRLNDANIEDLLTLIYTSGTTGQPKGVMLDYGNVAAQ 206
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPH 292
+ + D L LP HV+ERA +++ RG Y +++ L QP
Sbjct: 207 LEGHDARLSLSQDDVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVREALSEVQPT 266
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE ++S I +++ + R+V+ + + A + EG +QP
Sbjct: 267 VMCAVPRFYEKIFSAIHEKVSKAPMIRKVLFTWAVNMGAKMAACDQ--EG-------RQP 317
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFY 411
S IL H LA+KLV K+++ +G + GG L I F+
Sbjct: 318 SL---------------ILKKSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFF 362
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
A+G+ V++GYG+TE++ ++ S+G + ++KI E NE+L
Sbjct: 363 HAMGINVKLGYGMTETTATVSCWSDNSFNPDSIGMAMPGAQVKI--GENNEIL------- 413
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
VRG VM+GY+K P T + DE G+L TGD G I G L + R K
Sbjct: 414 --VRGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHIDED----------GNLFITDRIK 461
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I
Sbjct: 462 ELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIK 521
Query: 592 HADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
+ D EL K EK ++ L EL K+ F++ P
Sbjct: 522 YHDRVELIKHHQVVEMLEKRVNDLQQELAKFEQVKKFKLLP 562
>gi|343500486|ref|ZP_08738379.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|418481417|ref|ZP_13050460.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342820330|gb|EGU55154.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|384570934|gb|EIF01477.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 602
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 157/577 (27%), Positives = 253/577 (43%), Gaps = 67/577 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q++ + L G++ ++K+ +FS+N +W +AD L A+ V +++ + +I
Sbjct: 43 QQVDALSLALLAHGIRIQDKIGIFSNNMPQWTIADFAALQVRAVTVPIYPTNTAAQSAYI 102
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
++ L V F+ + I+ + S D+ E S+ +I
Sbjct: 103 LQDADVRVLFVGEQPQFDAAVSIFDQCEQLELIVAM-----SDDIDVGEHEFAISWQRLI 157
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
K D R E DD+ T +YTSGTTG PKGVM+ + N+ Q+
Sbjct: 158 ---ANVDKVHQQELDIR----LEQANLDDLLTLIYTSGTTGQPKGVMVDYANIGAQLEGH 210
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMIS 296
+ D L LP HV+ERA ++ +G Y ++D L +P M +
Sbjct: 211 DQRLSLSQSDVSLCFLPLSHVFERAWTFYALYKGATNCYLQDTMQVRDALSEVRPTVMCA 270
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP YE ++S I +++ + R+V+ F + C +K PS
Sbjct: 271 VPRFYEKIFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVCHQEGRK-PSI-- 319
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIG 415
L H LA+KLV K+++ +G + GG L I F+ AIG
Sbjct: 320 -------------ALKKSHALADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIG 366
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ V++GYG+TE++ ++ C S+G + ++KI E NE+L VR
Sbjct: 367 INVKLGYGMTETTATVSCWDDKCFNPDSIGMAMPGAQVKI--GENNEIL---------VR 415
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+K P T + DE G+L TGD G I + G L + R K+ +
Sbjct: 416 GPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMK 465
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 466 TSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDR 525
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K EK ++ L EL K+ F++ P
Sbjct: 526 VELIKHHQVVEMLEKRVNELQQELAKFEQVKKFKLLP 562
>gi|426256228|ref|XP_004021743.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 2 [Ovis
aries]
Length = 699
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 241/548 (43%), Gaps = 80/548 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG + V +E + +I N +E + V+ PE
Sbjct: 147 PDKFIGIFAQNRPEWVIIEQGCFTYSMVIVPLYDTLGTEAITYIINKAELSLVFVDKPEK 206
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
N + E + +K ++ I+L+ S D++E + + S + DLGR +R+
Sbjct: 207 ANLLLEGVENKLIPCLKTIVLM----DSYGSDLLERGKKCGVEIISMKAMEDLGRANRQ- 261
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--- 243
K + +D+A +TSGTTGNPKG M+TH+N++ + +
Sbjct: 262 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKMTEKALM 310
Query: 244 -ENGDKFLSMLPPWHVYERA--CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ C I +R L DDL+ QP VP +
Sbjct: 311 LNASDTHISFLPLAHMYEQLMLCVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPRL 370
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 371 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 410
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVK 417
LW +KL++ KIQS++G K + G+ P+ + A+G +
Sbjct: 411 SLW---------------DKLIFHKIQSSLG-GKVRLMITGAAPVSATVLTFLRAALGCQ 454
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + P G VG P+ + IK+VD E L A +G V V+GS
Sbjct: 455 FYEGYGQTECTAGCCLTIPGDWTAGHVGAPMPCSIIKLVDVEEMNYLAAKGEGEVCVKGS 514
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V QGY K+P T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 NVFQGYLKDPVKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 564
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GE + P ++E RS I Q+ V G+ Q AI+VPD E + A++ IV
Sbjct: 565 QGEYIAPEKIENIYQRSEPIAQVFVHGESLQAFLIAIVVPDVETLGAWAQKRGIV-GSFE 623
Query: 597 ELSKEKTI 604
EL + K +
Sbjct: 624 ELCRNKDV 631
>gi|422536534|ref|ZP_16612441.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|315081416|gb|EFT53392.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|456739309|gb|EMF63876.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes FZ1/2/0]
Length = 646
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 252/543 (46%), Gaps = 70/543 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 150 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 198
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 199 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 256
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D LS LP H E + G + + + L +P +SVP +YE
Sbjct: 257 --DHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQ 314
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ S + ++ + S A+ + IRI E + + ++PS L
Sbjct: 315 VMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LR 358
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGY 422
AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GY
Sbjct: 359 AR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGY 409
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SP+++ P G+ G P+ +++ E E+L RG VM+G
Sbjct: 410 GLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKG 458
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 459 YWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNI 507
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E + ++ L V++G ++ ++ P +V A+RL I E+ + +
Sbjct: 508 SPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEALAERLHITSMTGPEMLRSE 567
Query: 603 TIS 605
++
Sbjct: 568 ELA 570
>gi|225021764|ref|ZP_03710956.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
gi|224945460|gb|EEG26669.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
Length = 610
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 238/526 (45%), Gaps = 63/526 (11%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
E+ + A+G GV+ ++++L S+ W + D + A GA++V SS ++ I
Sbjct: 54 EVYEVAKGFIANGVQQGDRIALLSETRYEWSLLDFAIWAAGAVSVPIYGSSSLSQIEWII 113
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
S +V E E + + + LL G S + I + I
Sbjct: 114 EDSGAVFAVTETREHTELMKNLVLGEDGKP---LLHGSTSQL-----RRILEINASAIAT 165
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
L E R D D R H S D+A+ VYTSGTTG PKG LTH N L ++ L
Sbjct: 166 LKFEGRPIDDDQVDGRIH----ATKSRDLASLVYTSGTTGRPKGCRLTHANWLSEVHGLL 221
Query: 239 DI---VPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRNLKDDLQRYQPHYM 294
A G + L+ LP HV RA + G + ++ L + QR +P+ +
Sbjct: 222 TNPIGAIARPGSRVLTFLPLAHVLSRAVSLAVAIGGGTQSHWSNFSTLGVEFQRARPNLI 281
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP V+E +++ SA A +R + + A K E + PS
Sbjct: 282 LGVPRVFEKVHN---------SAVANATAGGPVRAALFHKARKVAIEYSRALDTSEGPSR 332
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
++ L H ++LVY KI++A+G S +SGG ++ I F+
Sbjct: 333 MLKL---------------QHKTYDRLVYSKIRAAMGNSVHYAISGGSAMSPEILHFFRG 377
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG + GYGLTE++ A +G+VG PI ++I D +E+L
Sbjct: 378 IGAPIYEGYGLTETTAA-ATVDFVDQKIGTVGPPIGGVSVRIND--DSEIL--------- 425
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
++G+ V GY+ NP+AT ++ +DGW NTGD+G I G LV+ GR KD
Sbjct: 426 IKGTTVFDGYWNNPTATAESFTDDGWFNTGDLGEILE----------SGHLVITGRKKDL 475
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
IV + G+NV P +E+A + LI Q +V+G + G ++ D++
Sbjct: 476 IVTAGGKNVSPEPMEDALVAHPLISQAMVVGDGKPFIGLLVTLDED 521
>gi|224536543|ref|ZP_03677082.1| hypothetical protein BACCELL_01418 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521799|gb|EEF90904.1| hypothetical protein BACCELL_01418 [Bacteroides cellulosilyticus
DSM 14838]
Length = 604
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 157/590 (26%), Positives = 269/590 (45%), Gaps = 66/590 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + A L +GV+ EE + +FS N L D G A A+ + + SS +
Sbjct: 42 NQFSQTVRQVANALVELGVQEEENIGIFSQNKPECLYVDFGAFANRAVTIPLYATSSPAQ 101
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ + V ++ +++ +I+ +V D + ++ +
Sbjct: 102 AQYIINDAQIRYIFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVRDPRDMTSIY-F 157
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
DE ++ G+ N+ + DD+A +YTSGTTG PKGVML H N +
Sbjct: 158 DEFLETGK------GLPNNDIVEERTSRASDDDLANILYTSGTTGEPKGVMLHHSNYMEA 211
Query: 234 IRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 290
R ++DI + D+ +SM LP HV+E+A Y +G+++ + +++ ++ +
Sbjct: 212 FR-IHDIRLVDMSDQDVSMNFLPLTHVFEKAWTYLCIHKGVQICINLRPVDIQTTIKEIR 270
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M SVP +E +Y+G+Q++I + ++ + I++ +I+ L + +
Sbjct: 271 PTLMCSVPRFWEKVYAGVQEKIAQETGLKKAMMLDAIKVG-------KIHNIDYLRKGKT 323
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 408
P L++ L + EK VY ++ IGI + G ++P I
Sbjct: 324 PP-----LMNQLKYK-----------FYEKTVYALLKKTIGIENGNFFPTAGAAVPDEIC 367
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI D NE+L
Sbjct: 368 EFVHSVGINMLVGYGLTESTATVSCFLNQGYEIGSVGTVMPDVEVKIGDE--NEIL---- 421
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+RG + +GY+K AT A+D+DGW +TGD G++ G L L
Sbjct: 422 -----LRGKTITKGYYKKAEATAAAIDKDGWFHTGDAGYLK-----------GDQLYLTE 465
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R KD S G+ V P LE I QI +I ++ A+IVP V AK
Sbjct: 466 RIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEK 525
Query: 589 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + + EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 526 GIEYKNMEELLQHPKILGLF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 574
>gi|305667499|ref|YP_003863786.1| putative long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
gi|88709547|gb|EAR01780.1| probable long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
Length = 605
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 243/539 (45%), Gaps = 78/539 (14%)
Query: 58 QEILDFAE----GLRVIGVKPEEKLSLFS-DNSCRWLVADQGMLATGAINVVRGSRSSSE 112
QE+ D +E GL +G++ +K+++ + N WL+ D + G I++ SS
Sbjct: 36 QELFDASEQAASGLLKLGLQRGDKVAIVAYKNRPEWLIMDFAVQMAGMISIPLYPTISSS 95
Query: 113 ELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
E +I N +E KAA + L+ K SS + I +++
Sbjct: 96 EYEYILNEAEV--------------------KAAFCGGLDLYNKLSSAQKSVPSLIHIYT 135
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYE-TIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 231
+DE G ++ D+ + K TI S+D+ T +YTSGTTGNPKGVML+H N++
Sbjct: 136 FDEAS--GNPFWESIFDTESLTEVEKIRRTIKSEDLVTIIYTSGTTGNPKGVMLSHGNIM 193
Query: 232 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL---KDDLQR 288
H I ++P + G+K +S LP H++ERA + R + + + NL DL
Sbjct: 194 HVIIKTGALLPTKEGEKVISFLPLCHIFERAVSFAYCYRNVSVYFCGTDNLSGPNGDLID 253
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
+P +VP + E +Y I + +R + + +S AY
Sbjct: 254 VRPVAFTTVPRLLEKIYEAIYNKGLALEGIKRKLFFWALSLSDAYEL------------- 300
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
+Q A I W +A+KL++ K + A+G + K +G P+ I
Sbjct: 301 -EQKLSFTAKIKW--------------KIADKLIFSKWRDALGGNIKLIFTGAAPCPLKI 345
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARR--PTCNVLGSVGHPINHTEIKI--VDAETNEV 463
+ A G+ ++ GYGLTE++P + A P VLG+VG I E+ I D NE
Sbjct: 346 MRVFCAAGISIREGYGLTETAPTLTANSIDPNGAVLGTVGTVIEGVELLIDKSDGNYNE- 404
Query: 464 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRC 520
+G + V G VM GY+K P Q E DG W TGDIG + +
Sbjct: 405 ----DEGEILVIGPNVMSGYYKKPEINAQVFKEIDGKKWFCTGDIGKLV------KGPNG 454
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L + R K+ + S G+ V P +E LI Q++V+G Q+ A+IVP +E
Sbjct: 455 QDFLKITDRKKELLKTSGGKYVAPAPIENRIKEDFLIEQMMVVGDKQKYVSALIVPAEE 513
>gi|423223587|ref|ZP_17210056.1| hypothetical protein HMPREF1062_02242 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638212|gb|EIY32059.1| hypothetical protein HMPREF1062_02242 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 616
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 268/590 (45%), Gaps = 66/590 (11%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ Q + A L +GV+ EE + +FS N L D G A A+ + + SS +
Sbjct: 54 NQFSQTVRQVANALVELGVQEEENIGIFSQNKPECLYIDFGAFANRAVTIPLYATSSPAQ 113
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N ++ + V ++ +++ +I+ +V D + ++ +
Sbjct: 114 AQYIINDAQIRYIFVGEQFQYDAAFSVFGFCQSLQQLIIF---DRAVVRDPRDMTSIY-F 169
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
DE ++ G+ N+ + DD+A +YTSGTTG PKGVML H N +
Sbjct: 170 DEFLETGK------GLPNNDIVEERTSRASDDDLANILYTSGTTGEPKGVMLHHSNYMEA 223
Query: 234 IRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 290
R ++DI + D+ +SM LP HV+E+A Y +G+++ + +++ ++ +
Sbjct: 224 FR-IHDIRLVDMTDQDISMNFLPLTHVFEKAWTYLCVHKGVQICINLRPVDIQTTIKEIR 282
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P M SVP +E +Y+G+Q++I + ++ + I++ +I+ L R K
Sbjct: 283 PTLMCSVPRFWEKVYAGVQEKIAQETGLKKAMMLDAIKVG-------KIHNIDYL-RKGK 334
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 408
P ++ L + EK VY ++ IGI + G ++P I
Sbjct: 335 TPPLMLHL---------------KYKFYEKTVYALLKKTIGIENGNFFPTAGAAVPDEIC 379
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F ++G+ + VGYGLTES+ ++ +GSVG + E+KI D NE+L
Sbjct: 380 EFVHSVGINMLVGYGLTESTATVSCFLNQGYEIGSVGTVMPDVEVKIGDE--NEIL---- 433
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+RG + +GY+K AT A+D+DGW +TGD G++ G L L
Sbjct: 434 -----LRGKTITKGYYKKAEATAAAIDKDGWFHTGDAGYLK-----------GDQLYLTE 477
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R KD S G+ V P LE I QI +I ++ A+IVP V AK
Sbjct: 478 RIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEK 537
Query: 589 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
I + + EL + I L+ R T + F Q+ ++ EPF++
Sbjct: 538 GIEYKNMEELLQHPKILGLF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 586
>gi|392391090|ref|YP_006427693.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390522168|gb|AFL97899.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 595
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 251/536 (46%), Gaps = 58/536 (10%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G+K + + +FS N W +AD L G + + ++++++ +I N +E+ + V
Sbjct: 54 GLKKGDTVGIFSQNMPEWTLADIAALNIGCPTIPVYATNAADQVKYILNDAETSVVFVGE 113
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
E +N + L ++ I+++ + + DI V+ D + E K
Sbjct: 114 QEQYNELLLALENQELSLKKIIVFDENVPLKNDI----SVYFKDYVAQGNPEQFKT---- 165
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 250
++ I SDD AT +YTSGTTG PKGV+LTH N L I + + + D +
Sbjct: 166 ---ELAERFNEIDSDDTATLIYTSGTTGKPKGVILTHTNFLAAIENHKERYDLTDKDVSM 222
Query: 251 SMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 309
+ LP H++ERA + S G+ +Y R++ D L +P M SVP +YE +Y Q
Sbjct: 223 AFLPLSHIFERAWSFLALSVGMTNIYNRDPRSIADMLLIAKPTAMCSVPRLYEKVY---Q 279
Query: 310 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 369
I T S ++ V + +A K+ E RN K + + + D
Sbjct: 280 MAINTMSKSKAPVKKLFF---WALEIGKKREE---YVRNGKNLPFGLKIKDQ-------- 325
Query: 370 ILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESS 428
+AE LVYKK + +G + + + GG + + F+ A+ + + VGYGL+E++
Sbjct: 326 -------IAETLVYKKFREKLGGNLSFIPCGGAYVGDEVVEFFRAMRLPLIVGYGLSETT 378
Query: 429 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 488
+++ + LGSVG PIN+ ++KI E NE+L V+G VM+GY+ P
Sbjct: 379 ATVSSCQINDYELGSVGKPINNVDVKI--GENNEIL---------VKGRTVMKGYYNRPE 427
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
++A +DGW TGD G G LV+ R K+ I + G+ + P +E
Sbjct: 428 ENEKAFTKDGWFKTGDAGRFDEK----------GNLVITDRIKELIKTAGGKYIAPQMVE 477
Query: 549 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 604
+ I Q VV G+ + A+I P+ + + AK +I + EL K K +
Sbjct: 478 NVLTKDPEIAQAVVYGERKPYAVALITPNFDWLKNWAKEQNINFQNMVELIKNKKV 533
>gi|238786709|ref|ZP_04630510.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
gi|238725077|gb|EEQ16716.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
Length = 599
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 256/546 (46%), Gaps = 75/546 (13%)
Query: 75 EEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFF 134
+E++ +F++NS W +AD +L ++V + ++ + ++ N ++ L V F
Sbjct: 62 QERIGIFANNSMAWSLADLAILQLRGVSVPLYATNTVAQAAYVINDADVRILFVGGQTQF 121
Query: 135 NRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL-GRESRKAFSD---- 189
N IA TL ++ P + + D +DL G E + +D
Sbjct: 122 N-IAITL----------------KTLCPQLTH---IIVLDPAVDLCGCEYAQHLADFEQQ 161
Query: 190 SNDARKHY---KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 246
++ ++H + E+ +D+ T +YTSGTTG PKGVML ++N+ Q+ +
Sbjct: 162 PDEVQQHLLTARIESCDLNDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTTE 221
Query: 247 DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLY 305
D LS LP HV+ERA +++ G + +Y + + ++ +Q +P M +VP YE ++
Sbjct: 222 DVSLSFLPLSHVFERAWSFYVMHTGAQNVYISNTDWVRAAMQATKPTVMCAVPRFYEKVF 281
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
S I ++ + RR++ R I S F+ + G L+ +Q
Sbjct: 282 SAIHDKVALAKWHRRLLFRWAIGCS--ERQFQSLQNGQTLSPLSRQ-------------- 325
Query: 366 IICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGL 424
++ LA++LV K++ +G + G+ L +I LF+++IG+ ++ GYG+
Sbjct: 326 --------MYKLADRLVLSKLRGILGGKVRFLPAAGARLDDNIILFFQSIGINIKYGYGM 377
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE+ ++ GS+G P+ E+++ G++ ++VRG VM+GYF
Sbjct: 378 TETCATVSCWEEKDFCFGSIGKPLPGIEVRL-----------GAENEIQVRGQIVMRGYF 426
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
P T ++ EDGWL TGD G + G L + R KD + S G+ + P
Sbjct: 427 NKPQETAESFTEDGWLKTGDAGALDTQ----------GNLFITERLKDLMKTSGGKYIAP 476
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 604
+E + I QI +I ++ A+IVP E + A+ +++ + D EL + I
Sbjct: 477 QMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYARSINLKYHDRLELLRHSHI 536
Query: 605 SLLYGE 610
L+ +
Sbjct: 537 VALFEQ 542
>gi|294634995|ref|ZP_06713512.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
gi|291091594|gb|EFE24155.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
Length = 603
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 256/553 (46%), Gaps = 62/553 (11%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A L GV+ +E++++F+ NS W +AD +L A+ V + +++ + +I N +
Sbjct: 53 LARALLAWGVEVQERVAIFAHNSVAWSLADLAILHLRAVTVPIYATNTASQAAYILNDAS 112
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V+ ++ + +R II+L +I + ++ E
Sbjct: 113 VRILFVDGQAQYDAVLALRSDCPQLRHIIVLTRDVDLRGCEIACHLDELAHAEHEIYAEP 172
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-V 241
+ +++ DD+ T +YTSGTTG PKGVML ++NL Q+ L+D +
Sbjct: 173 LAQRIAEAT------------LDDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARL 219
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLV 300
+ D L LP HV+ERA +++ G + +Y NL ++ +Q +P M +VP
Sbjct: 220 NVSDQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRF 279
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE ++S +Q ++ + RR + R + + +R F R
Sbjct: 280 YEKIFSAVQAKVAQAPWLRRQLFRWAV-----WCGEQR----FLRERA------------ 318
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQ 419
R + ++ +H A++LV K++ +G + + G L + LF++A+G+ ++
Sbjct: 319 ---GRPLSGMMAAMHRAADRLVLGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIK 375
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE+ ++ GS+G P+ E++I AE NE+ +VRG V
Sbjct: 376 YGYGMTETCATVSCWEEHDFRFGSIGRPLPGIEVRI--AEENEI---------QVRGPIV 424
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GYF P T Q+ DGWL TGD G + G L + R KD + S G
Sbjct: 425 MRGYFNKPQETAQSFTADGWLKTGDAGALDAQ----------GNLFITERLKDLMKTSNG 474
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P +E R I Q+ VI ++ A+IVP + + A+ +++ + D +L
Sbjct: 475 KYIAPQLVEGTLARDRFIEQVAVIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLL 534
Query: 600 KEKTISLLYGELR 612
+ I ++ ELR
Sbjct: 535 RHSHIVEMF-ELR 546
>gi|209696156|ref|YP_002264086.1| AMP-binding protein [Aliivibrio salmonicida LFI1238]
gi|208010109|emb|CAQ80434.1| putative AMP-binding enzyme [Aliivibrio salmonicida LFI1238]
Length = 611
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 255/575 (44%), Gaps = 67/575 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
Q++ + L G+K +EK+ +F++N RW VAD + ++ V ++ + ++
Sbjct: 51 QQMDTLSLALLAHGLKIQEKVGIFANNMPRWTVADFATMQLRSVPVPIYPTNTPTQAAYV 110
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
N + L V +N + I+ L S D+ + S+++ I
Sbjct: 111 INDANIRILFVGEQAQYNSAVVIFEQCPQLTHIVAL-----SDDIDLNDHEAGISWNDFI 165
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
ES + ++ +T DD+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 166 SAANESHQE-------ELTHRLDTAEMDDLLTLIYTSGTTGEPKGVMLDYTNIGSQLEGH 218
Query: 238 YDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMIS 296
+ D L LP HV+ERA +++ +G Y NL KD L +P M +
Sbjct: 219 NTNLALTEKDVSLCFLPLSHVFERAWTFYVLYKGAINCYLPNTNLIKDALIEVKPTVMCA 278
Query: 297 VPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLV 356
VP YE ++S + +++ + A R+V+ + + +A K + ++PS+
Sbjct: 279 VPRFYEKIFSTVHEKVSRAPAHRKVMFTWAVNMGAKMSACK---------QEAREPSW-- 327
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIG 415
IL H +A+KLV K++ +G + + GG L I F+ A+G
Sbjct: 328 -------------ILKQSHKIADKLVLSKLRMILGGNINFMPCGGAKLDATIGRFFHALG 374
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
V V++GYG+TE++ I+ S+G + E+KI G K + VR
Sbjct: 375 VNVKLGYGMTETTATISCWEDGKFHPDSIGTLMPGAEVKI-----------GKKNEILVR 423
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+ P T EDG+L TGD G G L + R K+ +
Sbjct: 424 GPMVMKGYYNKPEETALTFTEDGFLKTGDAG----------EFDADGNLYITDRIKELMK 473
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 474 TSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDALEEYAKELNIAYHDR 533
Query: 596 SELSK--------EKTISLLYGELRKWTSKCSFQI 622
EL K EK ++ L EL ++ F +
Sbjct: 534 MELVKNSEIVEMLEKRVANLQKELARFEQVKKFTL 568
>gi|422017259|ref|ZP_16363824.1| AMP-binding protein [Providencia alcalifaciens Dmel2]
gi|414105409|gb|EKT66966.1| AMP-binding protein [Providencia alcalifaciens Dmel2]
Length = 585
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 250/557 (44%), Gaps = 58/557 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++++ + D A L + V P+E + LF+ NS W + D +L A+ V + SS ++
Sbjct: 26 AEVDTKTTDIARQLLAMNVAPQENIGLFAQNSMNWSLVDIAVLHIKAVTVPLYATSSVDQ 85
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+I N + L V + E ++ + L + II L + + + + + ++
Sbjct: 86 AAYIINDANIRILFVGSQEQYHVACQLLTHCPQLTAIIAL-DESVELDSQVANSMHLSTF 144
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ L + +A D+ A ++ D+ T +YTSGTTG PKGVML + N+ Q
Sbjct: 145 ---MSLAQPDYQAELDARIAAQNLS-------DLFTIIYTSGTTGEPKGVMLDYYNMASQ 194
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPH 292
+ + + D L LP HV+ERA +++ G +Y N+ K+ L +P
Sbjct: 195 LYLHDNRLELSEEDVSLCFLPLSHVFERAWSFYVMHSGARNVYLTDTNMVKEALAEVKPT 254
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP YE +YS IQ ++ + RR++ + I I KR+ + L+ K
Sbjct: 255 VMCAVPRFYEKVYSAIQSKVSQAPLMRRMIFKWAIAI--GKQKVKRMAKSQSLSFLNK-- 310
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 411
PL+ LA+KLV KI+ +G + + G L + F+
Sbjct: 311 --------------------PLYALADKLVLSKIRQGLGGRIRFMPAAGARLDDDVIAFF 350
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+ GV ++ GYG++E+ ++ LGS+G P++ ++I G
Sbjct: 351 LSAGVDIKYGYGMSETCATVSCWEDNKYPLGSIGTPLSAISVRI-----------GENDE 399
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
++V+G VM+GY+ P T DGWL TGD G I G L + R K
Sbjct: 400 IQVKGPVVMKGYYNRPQETIDTFTADGWLRTGDAGKIDAQ----------GNLYITDRLK 449
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
D + S G+ + P +E + I I VI ++ A+IVP + + A +++
Sbjct: 450 DLMKTSNGKYIAPQVIEGVLGQDRFIEHIAVIADARKFVSALIVPCYDSLEEYANSINLK 509
Query: 592 HADASELSKEKTISLLY 608
+ D EL K+ I L+
Sbjct: 510 YRDRLELLKDSKIVALF 526
>gi|117928184|ref|YP_872735.1| AMP-dependent synthetase and ligase [Acidothermus cellulolyticus
11B]
gi|117648647|gb|ABK52749.1| AMP-dependent synthetase and ligase [Acidothermus cellulolyticus
11B]
Length = 615
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/554 (27%), Positives = 239/554 (43%), Gaps = 92/554 (16%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A GL G++P +++L S W + D + G I V SS +++ I ++
Sbjct: 71 LARGLLAAGLQPGARVALLSRTRYEWTLVDYALWHAGLITVPIYETSSPDQIGWILGDAQ 130
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
A VE+PE + V + + +P + +I+ G
Sbjct: 131 VAAAIVESPE------------------------HARVVNAVRDVVPNLQHIWVIEDGDL 166
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
R ++D + +G+ +AT VYTSGTTG PKG +LTH NLL RS +P
Sbjct: 167 DRLTAQRASDDQLASARRELGAGSVATIVYTSGTTGRPKGCVLTHGNLLFAARSAVGSLP 226
Query: 243 A--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPL 299
A L LP HV+ R + + + L+ DL ++P +++VP
Sbjct: 227 ALFHEHTSALLFLPLAHVFAREIQVACVEAAVPVGHCPDTYQLQTDLASFRPTLLLAVPY 286
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ E +Y AAR R R+ FA RN +Q S
Sbjct: 287 LLEKVY---------WLAARTAEQRGTSRL-FA-----------AAVRNAQQVS------ 319
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 418
A + A + L ++LVY++I++A+G + + VSGG L H+ F+ G+ V
Sbjct: 320 ----AGPVTAAVRVRRALFDRLVYRRIRAALGGAVEWVVSGGAPLAPHLGHFFRGAGIPV 375
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
G+GLTE++ RP +G+VG P+ TE+ + + G + VRG
Sbjct: 376 LEGWGLTETTAAATVNRPDATKIGTVGLPLAGTEVGLT-----------ADGELLVRGGH 424
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V GY+ +P+AT++ LD DGWL+TGD+G I G + + GR K+ +V +
Sbjct: 425 VFAGYWGDPAATQEVLDADGWLHTGDLGEI----------DDDGFVTITGRRKEILVTAG 474
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G+NV P LE L+ VV+G + A+I D E V DA +
Sbjct: 475 GKNVAPAVLENRVAGHPLVAHCVVVGDGRPYVAALITLDPEAV------------DAWKQ 522
Query: 599 SKEKTISLLYGELR 612
K SL ELR
Sbjct: 523 KMGKPASLTLAELR 536
>gi|299531038|ref|ZP_07044451.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298720995|gb|EFI61939.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 649
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 158/580 (27%), Positives = 269/580 (46%), Gaps = 55/580 (9%)
Query: 35 VATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEE----------KLSLFSDN 84
+A R+R + +R F ES + L +AE + + + ++++ N
Sbjct: 31 LAMRVRCTPSAEAYREFDESTNAWKSLSWAETAKRVALWSRALCASNLPVGARVAILLPN 90
Query: 85 SCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSK 144
+ DQ L G + V + ++ + +I S + L V + + + RI T
Sbjct: 91 GFDAMTIDQACLRCGYVPVPLHAIDNAGSIAYILADSGASLLVVADAKAWQRICATGQDL 150
Query: 145 AAMRFII-LLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDA-RKHYKYETI 202
++ +I G+ + V + D + L R+ S A ++H +
Sbjct: 151 PGLQAVIHAQQGRPIDSSNAYVVPVEQAEQDSVKVLQRKPVIVLSAWLQAGQRHTSALPL 210
Query: 203 GSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 260
+ ++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +E
Sbjct: 211 PPNKTELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFE 270
Query: 261 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 318
R GY++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S
Sbjct: 271 RTAGYYLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASSPFK 330
Query: 319 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 378
++ A+ + ++ A + + G + + + S+ AL WL +++ L L
Sbjct: 331 HKLFDAAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLRKLVAQPL--LAQFG 385
Query: 379 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
+L + VSGG L I + +G+ + GYG+TE++PV++A
Sbjct: 386 GRL------------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDD 433
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
N +VGH + E++I D + ++V G VM+GY+ P T +A DG
Sbjct: 434 NWPDTVGHVLPGIEVRIGDDQE-----------LQVSGPVVMRGYWNRPEDTAKAFTADG 482
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
WL TGD I GR R ++GR K+ IV STGE V P ++E+A L L
Sbjct: 483 WLRTGDQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFE 531
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
Q+ V+G+D+ I V + E M A+ + + D S L
Sbjct: 532 QVFVVGEDRPFIACIAVVGQVEWEMLARSVGLNPNDGSSL 571
>gi|451965692|ref|ZP_21918949.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
gi|451315494|dbj|GAC64311.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
Length = 600
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 256/553 (46%), Gaps = 62/553 (11%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A L GV+ +E++++F+ NS W +AD +L A+ V + +++ + +I N +
Sbjct: 50 LARALLAWGVEVQERVAIFAHNSVAWSLADLAILHLRAVTVPIYATNTASQAAYILNDAS 109
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V+ ++ + +R II+L +I + ++ E
Sbjct: 110 VRILFVDGQAQYDAVLALRSDCPQLRHIIVLTRDVDLRGCEIACHLDELAHAEHEIYAEP 169
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-V 241
+ +++ DD+ T +YTSGTTG PKGVML ++NL Q+ L+D +
Sbjct: 170 LAQRIAEAT------------LDDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARL 216
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLV 300
+ D L LP HV+ERA +++ G + +Y NL ++ +Q +P M +VP
Sbjct: 217 NVSDQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRF 276
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
YE ++S +Q ++ + RR + R + + +R F R
Sbjct: 277 YEKIFSAVQAKVAQAPWLRRQLFRWAV-----WCGEQR----FLRERA------------ 315
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQ 419
R + ++ +H A++LV K++ +G + + G L + LF++A+G+ ++
Sbjct: 316 ---GRPLSGMMAAMHRAADRLVLGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIK 372
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE+ ++ GS+G P+ E++I AE NE+ +VRG V
Sbjct: 373 YGYGMTETCATVSCWEEHDFRFGSIGRPLPGIEVRI--AEENEI---------QVRGPIV 421
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GYF P T Q+ DGWL TGD G + G L + R KD + S G
Sbjct: 422 MRGYFNKPQETAQSFTADGWLKTGDAGALDAQ----------GNLFITERLKDLMKTSNG 471
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 599
+ + P +E R I Q+ VI ++ A+IVP + + A+ +++ + D +L
Sbjct: 472 KYIAPQLVEGTLARDRFIEQVAVIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLL 531
Query: 600 KEKTISLLYGELR 612
+ I ++ ELR
Sbjct: 532 RHSHIVEMF-ELR 543
>gi|433544938|ref|ZP_20501307.1| AMP-dependent synthetase and ligase [Brevibacillus agri BAB-2500]
gi|432183811|gb|ELK41343.1| AMP-dependent synthetase and ligase [Brevibacillus agri BAB-2500]
Length = 640
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/577 (26%), Positives = 272/577 (47%), Gaps = 65/577 (11%)
Query: 40 RISRRNHRFRVFCE---SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGML 96
+ + R + ++ E +L +E+ + GLR +G +KL++ DN W++A+
Sbjct: 20 KTAMRQKKLGIWQELTWRQLSEEVKALSSGLRELGFSRGDKLAIIGDNRPEWVMAEAAAQ 79
Query: 97 ATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK 156
A G ++V S +E+ +I NHS++ + VE+ E +++ E + + I+ +
Sbjct: 80 ALGGVSVGLYQDSLPKEIAYILNHSDAKIVVVEDQEQVDKLLE-IADELPFVQKIVFYKD 138
Query: 157 KSSVAPDIVEEIPVFS-YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
K D P+ S + ++ LGR+ A+ S + + + ++ +DIA YT+G
Sbjct: 139 KGMRGYDH----PLLSPFRDVQQLGRQC--AYYASGEWEREVEQGSV--EDIAILCYTAG 190
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER---ACGYFIFSRGI 272
TTG PKG ML+H+NLLH SL+ I P + D+++S LP + E+ G F+ +
Sbjct: 191 TTGPPKGAMLSHRNLLHMTESLFSIDPVDVSDEYVSFLPLAWIGEQMMSVSGAFLAGYTV 250
Query: 273 ELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 332
++ DL+ PH + S P ++E + S +Q ++ + +R
Sbjct: 251 NFP-EDTSTVQADLREIGPHLIFSPPRIWEDMVSRVQVKLQDAGWLKR------------ 297
Query: 333 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 392
+YE F K + + +W R+ ++ L + LV+ I+ +G+
Sbjct: 298 -----SLYEWFRPYGEAKAQTAIAGGRLTVWQRL-------MYTLGDYLVFSAIKDHLGL 345
Query: 393 S--KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
K +GG +L + F++++GV ++ YG TE S + A R +VG P+
Sbjct: 346 LRIKRAYTGGAALGADVSRFFQSLGVNLKQIYGQTEVSGIAAVHRDGKIKPDTVGEPLPG 405
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
TEI + D KG + ++ V GY+KN AT+ L GWL TGD+G+
Sbjct: 406 TEINVSD-----------KGEIWIKSPSVFAGYYKNERATEAVL-VGGWLRTGDVGY--- 450
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
+ G ++VL+ R +D I L E V P +E S I++++ IG D+
Sbjct: 451 ------TDESGQLVVLD-RLQDVIRLDNDELVSPQLIENKLKFSPYIKEVMAIGTDRPYV 503
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 607
AI+ D V A+ + + S+L++++ + LL
Sbjct: 504 TAILNIDMANVGRYAELNQVAYTTYSDLAQKQEVLLL 540
>gi|422430433|ref|ZP_16507314.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|422533384|ref|ZP_16609322.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
gi|314979072|gb|EFT23166.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|315089618|gb|EFT61594.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
Length = 646
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 252/543 (46%), Gaps = 70/543 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 150 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 198
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 199 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 256
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D LS LP H E + G + + + L +P +SVP +YE
Sbjct: 257 --DHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQ 314
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ S + ++ + S A+ + IRI E + + ++PS L
Sbjct: 315 VMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LR 358
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGY 422
AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GY
Sbjct: 359 AR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGY 409
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SP+++ P G+ G P+ +++ E E+L RG VM+G
Sbjct: 410 GLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKG 458
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 459 YWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNI 507
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E + ++ L V++G ++ ++ P +V A+RL I E+ + +
Sbjct: 508 SPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSE 567
Query: 603 TIS 605
++
Sbjct: 568 ELA 570
>gi|335055097|ref|ZP_08547887.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|365963859|ref|YP_004945425.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365966099|ref|YP_004947664.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|387504596|ref|YP_005945825.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|407936605|ref|YP_006852247.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes C1]
gi|422383826|ref|ZP_16463967.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|422426562|ref|ZP_16503482.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|422431738|ref|ZP_16508609.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|422434480|ref|ZP_16511338.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|422442966|ref|ZP_16519767.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|422445214|ref|ZP_16521967.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|422448125|ref|ZP_16524857.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|422449813|ref|ZP_16526534.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|422452652|ref|ZP_16529349.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|422455623|ref|ZP_16532293.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|422479039|ref|ZP_16555450.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|422482169|ref|ZP_16558568.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|422489693|ref|ZP_16566020.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|422496633|ref|ZP_16572915.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|422499723|ref|ZP_16575981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|422501800|ref|ZP_16578049.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|422505286|ref|ZP_16581517.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|422507577|ref|ZP_16583759.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|422509591|ref|ZP_16585747.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|422512267|ref|ZP_16588400.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|422538955|ref|ZP_16614829.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|422541835|ref|ZP_16617691.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|422546754|ref|ZP_16622578.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|422552786|ref|ZP_16628574.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|422556133|ref|ZP_16631892.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|422556623|ref|ZP_16632375.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|422561513|ref|ZP_16637198.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|422567888|ref|ZP_16643513.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|422569205|ref|ZP_16644820.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|422577342|ref|ZP_16652876.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|313765156|gb|EFS36520.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|313808590|gb|EFS47050.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|313817120|gb|EFS54834.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|313819065|gb|EFS56779.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|313821657|gb|EFS59371.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|313823792|gb|EFS61506.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|313826896|gb|EFS64610.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|313829267|gb|EFS66981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|314916839|gb|EFS80670.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|314921153|gb|EFS84984.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|314926132|gb|EFS89963.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|314932500|gb|EFS96331.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|314956271|gb|EFT00643.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|314958768|gb|EFT02870.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|314960972|gb|EFT05073.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|314968795|gb|EFT12893.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|314985948|gb|EFT30040.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|314989257|gb|EFT33348.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|315084943|gb|EFT56919.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|315087473|gb|EFT59449.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|315100054|gb|EFT72030.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|315102786|gb|EFT74762.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|315107340|gb|EFT79316.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|315110512|gb|EFT82488.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|327333995|gb|EGE75710.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|327455527|gb|EGF02182.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|327456182|gb|EGF02837.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|328756809|gb|EGF70425.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|328757697|gb|EGF71313.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|328759092|gb|EGF72708.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|333762704|gb|EGL40190.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|335278641|gb|AEH30546.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|365740540|gb|AEW84742.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365742780|gb|AEW82474.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|407905186|gb|AFU42016.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes C1]
Length = 646
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 252/543 (46%), Gaps = 70/543 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 150 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 198
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 199 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 256
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D LS LP H E + G + + + L +P +SVP +YE
Sbjct: 257 --DHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQ 314
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ S + ++ + S A+ + IRI E + + ++PS L
Sbjct: 315 VMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LR 358
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGY 422
AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GY
Sbjct: 359 AR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGY 409
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SP+++ P G+ G P+ +++ E E+L RG VM+G
Sbjct: 410 GLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKG 458
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 459 YWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNI 507
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E + ++ L V++G ++ ++ P +V A+RL I E+ + +
Sbjct: 508 SPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSE 567
Query: 603 TIS 605
++
Sbjct: 568 ELA 570
>gi|31560705|ref|NP_032007.2| long-chain-fatty-acid--CoA ligase 1 [Mus musculus]
gi|338817850|sp|P41216.2|ACSL1_MOUSE RecName: Full=Long-chain-fatty-acid--CoA ligase 1; AltName:
Full=Long-chain acyl-CoA synthetase 1; Short=LACS 1
gi|12836429|dbj|BAB23652.1| unnamed protein product [Mus musculus]
gi|34784805|gb|AAH56644.1| Acyl-CoA synthetase long-chain family member 1 [Mus musculus]
gi|74143603|dbj|BAE28854.1| unnamed protein product [Mus musculus]
gi|74148118|dbj|BAE36230.1| unnamed protein product [Mus musculus]
gi|74207610|dbj|BAE40051.1| unnamed protein product [Mus musculus]
gi|74219200|dbj|BAE26736.1| unnamed protein product [Mus musculus]
gi|74220537|dbj|BAE31484.1| unnamed protein product [Mus musculus]
gi|74225543|dbj|BAE31678.1| unnamed protein product [Mus musculus]
Length = 699
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 256/571 (44%), Gaps = 86/571 (15%)
Query: 58 QEILDFAE----GLRVIGVKP--EEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSS 111
+E+ + AE GL G KP E+ + LFS N W++ +QG + + V +
Sbjct: 125 KEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGA 184
Query: 112 EELLHIYNHSESVALAVENPEFFNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-- 167
+ + +I N +E + + PE + E + +K ++ I+++ S D+VE
Sbjct: 185 DAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIM----DSYGSDLVERGK 240
Query: 168 ---IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+ + S + DLGR +R K + +D+A +TSGTTGNPKG M
Sbjct: 241 KCGVEIISLKALEDLGRVNR------------VKPKPPEPEDLAIICFTSGTTGNPKGAM 288
Query: 225 LTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-- 278
+TH+N+++ I++ A D +S LP H++E + G ++ +
Sbjct: 289 ITHQNIINDCSGFIKATESAFIASTDDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGD 348
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
+R L DDL+ QP VP + ++ I Q A T+ KR
Sbjct: 349 IRLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQ--------------------ANTSLKR 388
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS 398
F R + + + + LW +KL++ KIQS++G K +
Sbjct: 389 WLLDFASKRKEAELRSGIVRNNSLW---------------DKLIFHKIQSSLG-GKVRLM 432
Query: 399 GGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
G+ P+ + A+G + GYG TE + P G VG P+ +K+
Sbjct: 433 ITGAAPVSATVLTFLRTALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYVKL 492
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
VD E L + +G V V+G+ V +GY K+P+ T +ALD+DGWL+TGDIG P+
Sbjct: 493 VDVEEMNYLASKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPN---- 548
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAII 574
G L + R K L+ GE + P ++E LRS + Q+ V G+ Q A++
Sbjct: 549 ------GTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAVV 602
Query: 575 VPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
VPD E + A++ + EL + K I+
Sbjct: 603 VPDVESLPSWAQKRGL-QGSFEELCRNKDIN 632
>gi|50843669|ref|YP_056896.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes KPA171202]
gi|289425916|ref|ZP_06427668.1| AMP-binding enzyme [Propionibacterium acnes SK187]
gi|289428166|ref|ZP_06429865.1| AMP-binding enzyme [Propionibacterium acnes J165]
gi|365975037|ref|YP_004956596.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn33]
gi|386025164|ref|YP_005943470.1| putative long-chain-fatty-acid--CoA ligase [Propionibacterium acnes
266]
gi|50841271|gb|AAT83938.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes KPA171202]
gi|289153692|gb|EFD02401.1| AMP-binding enzyme [Propionibacterium acnes SK187]
gi|289158646|gb|EFD06850.1| AMP-binding enzyme [Propionibacterium acnes J165]
gi|332676623|gb|AEE73439.1| putative long-chain-fatty-acid--CoA ligase [Propionibacterium acnes
266]
gi|365745036|gb|AEW80233.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn33]
Length = 644
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 254/545 (46%), Gaps = 74/545 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 148 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 196
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 197 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 254
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVY 301
D LS LP H E + G + T V N K L +P +SVP +Y
Sbjct: 255 --DHSLSFLPLSHALEWGWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLY 310
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E + S + ++ + S A+ + IRI E + + ++PS
Sbjct: 311 EQVMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------ 354
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQV 420
L AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V
Sbjct: 355 LRAR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQ 405
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYGLTE+SP+++ P G+ G P+ +++ E E+L RG VM
Sbjct: 406 GYGLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVM 454
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GY+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+
Sbjct: 455 KGYWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGK 503
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
N+ P +E + ++ L V++G ++ ++ P +V A+RL I E+ +
Sbjct: 504 NISPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLR 563
Query: 601 EKTIS 605
+ ++
Sbjct: 564 SEELA 568
>gi|422486485|ref|ZP_16562831.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
gi|327450368|gb|EGE97022.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
Length = 646
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 254/545 (46%), Gaps = 74/545 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 150 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 198
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 199 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 256
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVY 301
D LS LP H E + G + T V N K L +P +SVP +Y
Sbjct: 257 --DHSLSFLPLSHALEWGWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLY 312
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E + S + ++ + S A+ + IRI E + + ++PS
Sbjct: 313 EQVMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------ 356
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQV 420
L AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V
Sbjct: 357 LRAR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQ 407
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYGLTE+SP+++ P G+ G P+ +++ E E+L RG VM
Sbjct: 408 GYGLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVM 456
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GY+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+
Sbjct: 457 KGYWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGK 505
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
N+ P +E + ++ L V++G ++ ++ P +V A+RL I E+ +
Sbjct: 506 NISPQPIENSLMKDPLFEHAVLLGNNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLR 565
Query: 601 EKTIS 605
+ ++
Sbjct: 566 SEELA 570
>gi|153949544|ref|YP_001402359.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|170025747|ref|YP_001722252.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
gi|152961039|gb|ABS48500.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|169752281|gb|ACA69799.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
Length = 601
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/580 (25%), Positives = 270/580 (46%), Gaps = 85/580 (14%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++++ + + L +G +E++ +F++NS W + D +L ++V + +++ +
Sbjct: 41 QQIDEHVTRISTALLSLGAAIQERIGIFANNSMAWSLVDLAILQLRGVSVPLYATNTAAQ 100
Query: 114 LLHIYNHSESVALAV-ENPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
+I N ++ L V E +F I + LC + A II+L
Sbjct: 101 AAYIVNDADVRILFVGEQSQFDIAITLQPLCPQLA--HIIVL------------------ 140
Query: 172 SYDEIIDL-GRESRKAFSDSNDARKHY---------KYETIGSDDIATYVYTSGTTGNPK 221
D +DL G E + +D ++ + E DD+ T +YTSGTTG PK
Sbjct: 141 --DPSVDLRGCEYAQHLADFEQQQQPDTVQQHLLTTRIEACDLDDLFTLIYTSGTTGEPK 198
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GVML ++N+ Q+ + D LS LP HV+ERA +++ G + +Y +RN
Sbjct: 199 GVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAWSFYVMHTGAQNVY--IRN 256
Query: 282 ---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
++ +Q +P M +VP YE ++S I ++ + +RV+ + FKR
Sbjct: 257 TDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRVLFHW--AVGCGERKFKR 314
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS 398
+ +G +P + WL + ++ LA++LV +K++ +G +
Sbjct: 315 LQQG--------RP------LPWLSEQ--------MYTLADRLVLRKLRGVLGGRVRFLP 352
Query: 399 GGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
G+ L +I LF++AIGV ++ GYG+TE+ ++ GS+G P+ ++++
Sbjct: 353 AAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSCWEEQNFRFGSIGKPLPGIDVRL-- 410
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G++ ++VRG VM+GYFK P T +A EDGWL TGD G +
Sbjct: 411 ---------GAENEIQVRGPIVMRGYFKKPQETLEAFTEDGWLKTGDAGALDAQ------ 455
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G L + R KD + S G+ + P +E + I Q+ +I ++ A+IVP
Sbjct: 456 ----GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPS 511
Query: 578 KEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 617
E + A+ +++ + D EL + I ++ + K K
Sbjct: 512 FESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLKEIQK 551
>gi|383758879|ref|YP_005437864.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
gi|381379548|dbj|BAL96365.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
Length = 608
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 47/400 (11%)
Query: 202 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 261
+G +D+A VYTSGTTG PKGVMLTH+N++ ++++ + D FLS LP H +ER
Sbjct: 185 VGEEDLAALVYTSGTTGKPKGVMLTHRNVMANVKAVLARIAPRPDDVFLSFLPLSHTFER 244
Query: 262 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 319
GY++ + G + + + ++L +D++ +P +ISVP +YE ++ +Q + S+ +
Sbjct: 245 TAGYYLPIAAGSTVAFARSTQHLPEDMKTVRPTVLISVPRIYERVFVKLQTMLEGSALKK 304
Query: 320 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 379
R+ A ++R FC + P + A D A++WP LLA
Sbjct: 305 RLFDMA------QAVGWRR----FCREQKLPVPGSVPAAWD--------ALVWP--LLAS 344
Query: 380 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
+ V +Q+ G + VSGG +L I + +G+ + GYG+TES+PVI+ P
Sbjct: 345 R-VSAPLQAQFGGRLRLAVSGGAALSAPIARCFLGLGLPIVQGYGMTESTPVISCNTPED 403
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
N +VG P++ E++I D E+L VRG+ VM+GY+ P T +AL E G
Sbjct: 404 NDPATVGRPLDGVEVRIGD--NRELL---------VRGANVMRGYWNRPEDTARAL-EGG 451
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
WL+TGD ++ GG + + GR K+ IV +TGE + P +LE A + L
Sbjct: 452 WLHTGD-----------QASLDGGRIRIVGRVKEIIVTATGEKIAPTDLEMAIVADPLFE 500
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
G ++ ++V A+ L + AD + L
Sbjct: 501 SAWAFGDNRPFIACVVVLAAGPWERLARSLGLDPADPASL 540
>gi|343514857|ref|ZP_08751922.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
gi|342799223|gb|EGU34798.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
Length = 602
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 164/578 (28%), Positives = 263/578 (45%), Gaps = 84/578 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT-GAINVVRGSRSSSEELLHIYNHS 121
A+GLRV ++K+ +FS+N +W VAD L T G I + + ++++ + N
Sbjct: 53 LAQGLRV-----QDKIGIFSNNMPQWTVADIATLQTRGVIVPIYPTSTAAQSAYILQNAD 107
Query: 122 ESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
V E P+F ++ E L AM I L G ++ S+ +
Sbjct: 108 VKVLFVGEQPQFDMAVSIFEQCEQLELIVAMSDDIDLQGHAFAI-----------SWQDF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
I G E+ +A + + DD+ T +YTSGTTG PKGVML + N+ Q++
Sbjct: 157 IARGDEAHQA-------ELQQRLDDANLDDLLTLIYTSGTTGQPKGVMLDYANIGAQLQG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ RG Y ++D L +P M
Sbjct: 210 HDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVRDALSEIRPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+V+ F + C ++ ++PS +
Sbjct: 270 AVPRFYEKIFSAIHEKVSKAPFIRKVL--------FTWAVNMGAKMAVC-HQDGRKPSLM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAI 414
L + LA+KLV K+++ +G + GG L I F+ AI
Sbjct: 321 ---------------LKKSYKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + ++KI E NE+L V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDKCFDPASIGMSMPGAQVKI--GENNEIL---------V 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T Q DE G+L TGD G I + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K E ++ L EL K+ F++ P
Sbjct: 525 RVELIKHHQIVEMLESRVNDLQKELAKFEQVKKFKLLP 562
>gi|289704915|ref|ZP_06501332.1| AMP-binding enzyme [Micrococcus luteus SK58]
gi|289558411|gb|EFD51685.1| AMP-binding enzyme [Micrococcus luteus SK58]
Length = 612
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 268/587 (45%), Gaps = 88/587 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL GV+P +++ LFS S W V DQ + GA++V SS+ ++ HI S
Sbjct: 66 AAGLIARGVQPGDRVGLFSPTSYAWAVLDQAVWFAGAVSVPIYETSSAHQVEHIVTDSGL 125
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+AV + E R+AE G + P E + E+ + G
Sbjct: 126 RVVAVGSDELGERVAEAAGHA----------GVDVATFPLTDEGLA-----ELAEAG--- 167
Query: 184 RKAFSDSNDARKHYK-YETIGSDDIATYVYTSGTTGNPKGVMLTHK-------NLLHQIR 235
AF S+DA +H + T+ S A+ VYTSGTTG PKG ++TH N+LH R
Sbjct: 168 --AFV-SDDAVEHARSLATLASP--ASIVYTSGTTGRPKGAVITHGNFVGAAINVLHFAR 222
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYM 294
+ P + L LP HV A I++ ++ + L DL + P ++
Sbjct: 223 EVVQWSPETTTSRTLLFLPLAHVLAHAVQVICLYARIQVAHSGSPATLLGDLASFHPTWL 282
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
++VP V+E + +GI+ + R A I ++ TA G + PS
Sbjct: 283 LAVPRVFEKVEAGIEAKAQKGGTGRIYAAAKRTAIEWS-TAVDEAEFG-----DGPGPS- 335
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEA 413
A+L L ++LVY+KI+ A+G + VSG +L + F+
Sbjct: 336 --------------ALLRARRALFDRLVYRKIREALGGEVISCVSGASALSPELVHFFRG 381
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + GYGLTE++ P + +G+VG P+ +KI AE E+L
Sbjct: 382 AGIPIVEGYGLTETTAPATVNIPGAHRVGTVGLPVAGVTVKI--AEDGEIL--------- 430
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG V GY P A+ +A+ EDG+ TGDIG + H G L + GR KD
Sbjct: 431 IRGPVVFDGYHGMPQASAEAM-EDGFFRTGDIGALDEH----------GFLRITGRKKDV 479
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSIV 591
I+ + G+NV P +EEA + LI +VV+G+++ GA+I D E + A + LS+
Sbjct: 480 IITAGGKNVYPTPMEEALRQHRLIEHVVVVGENRPFVGALITLDSEALTQWALDRELSLT 539
Query: 592 HADASE-----LSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFT 633
A+A+ S ++ + + + + S F+I +D PFT
Sbjct: 540 PAEAATDPTVLASIQEAVDQVNAGVSRAESIRRFRI-----LDHPFT 581
>gi|380714673|ref|NP_001244131.1| long-chain-fatty-acid--CoA ligase 1 [Callithrix jacchus]
gi|10957124|gb|AAG10398.2|AF190741_1 long-chain fatty acid CoA ligase [Callithrix jacchus]
Length = 698
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/547 (27%), Positives = 243/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V SE + +I N +E + V+ PE
Sbjct: 146 PDQFVGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGSEAITYILNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + V S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLTPGLKIIVLM----DAYGSELVERGKKCGVEVISMKAMEDLGRANRQ- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG ++TH+N++ ++ ++
Sbjct: 261 -----------KPKPPAPEDLAVVCFTSGTTGNPKGALITHRNVVSDCSAFVKMTEKVLA 309
Query: 243 AENGDKFLSMLPPWHVYERA--CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ C I +R L DDL+ QP VP +
Sbjct: 310 LNASDTHISFLPLAHMYEQLMLCVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW +KL+++KIQS++G + V+G + + F A +G +
Sbjct: 410 SLW---------------DKLIFRKIQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYIAAKGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E LRS + Q+ V G+ Q AI+VPD E + A++ + E
Sbjct: 565 GEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLIAIVVPDIETLCSWARKRGL-DGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|403285134|ref|XP_003933893.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 712
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 244/548 (44%), Gaps = 80/548 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V SE + +I N +E + V+ PE
Sbjct: 160 PDQCVGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGSEAITYIVNKAELSLVFVDKPEK 219
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + V S + DLGR +R+
Sbjct: 220 AKLLLEGVENKLIPGLKIIVLM----DAYGSELVERGKKCGVEVISMKAMEDLGRTNRQ- 274
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-----IV 241
K + +D+A +TSGTTGNPKG ++TH+N++ + ++
Sbjct: 275 -----------KPKPPAPEDLAVICFTSGTTGNPKGALITHRNVVSDCSAFVKMTENTVI 323
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 324 PCPD-DILISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPR 382
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 383 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIVRN 422
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVK 417
+ LW +KL++ KIQS++G + ++G + + F A +G +
Sbjct: 423 NSLW---------------DKLIFHKIQSSLGGRVRLMITGAAPVSATVLTFLRAALGCQ 467
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 468 FYEGYGQTECTAGCCLTVPGDWTAGHVGAPMPCNWIKLVDVEEMNYMAAKGEGEVCVKGP 527
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V QGY K P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 528 NVFQGYLKEPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 577
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GE + P ++E LRS + Q+ V G+ Q AI+VPD E+L + R
Sbjct: 578 QGEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLIAIVVPD-SEILCSWARKRGFDGSFE 636
Query: 597 ELSKEKTI 604
EL + K +
Sbjct: 637 ELCRNKDV 644
>gi|253988580|ref|YP_003039936.1| long-chain-fatty-acid--CoA ligase [Photorhabdus asymbiotica]
gi|253780030|emb|CAQ83191.1| long-chain-fatty-acid--CoA ligase [Photorhabdus asymbiotica]
Length = 600
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 156/579 (26%), Positives = 265/579 (45%), Gaps = 85/579 (14%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+ +++++ + L IGV +EK+ LF+ NS W + D +L A+ V + SS E+
Sbjct: 42 NDIDKKVKAISRALLEIGVDVQEKIGLFAHNSMVWSLTDIAILQLRAVTVPLYATSSQEQ 101
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
A + A + + + + +A ++E P S+
Sbjct: 102 ------------------------AGFILKDAGVHILFVGGQAQYDIAITLIECCPQLSH 137
Query: 174 ----DEIIDLGRESRKA-----FSDSNDARKHYKYET-IGS---DDIATYVYTSGTTGNP 220
DE +DL R+ A F N + + ET I + DD+ T +YTSGTTG P
Sbjct: 138 IIVLDESVDL-RDCSLAQHLSDFITDNKLQHQSELETRIANRSLDDLFTLIYTSGTTGEP 196
Query: 221 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
KGVML +++L +Q+ S +++ D LS LP H++ERA +++ G + +Y
Sbjct: 197 KGVMLDYRSLAYQLYSHDNVLTLTELDVSLSFLPLSHIFERAWSFYVMHTGAQNVYLTDT 256
Query: 281 N-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
N ++ + +P M +VP YE +YS + +++ + RR + ++A KR
Sbjct: 257 NFVRQAMAVIRPTVMCAVPRFYEKIYSAVFEKVSKAPWHRRKL------FNWAIECGKRQ 310
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSG 399
L + Q + S LW++ + H LA+KLV K+++ +G +
Sbjct: 311 ----VLRKLQGEKS-------CLWSKAV-------HRLADKLVLSKLRNVLGGRVRFLPA 352
Query: 400 GGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
G+ L I LF+ A+GV ++ GYG+TE+ ++ VLGS+G P+ +++I
Sbjct: 353 AGARLDETIILFFLAVGVNIKYGYGMTETCATVSCWGEQGYVLGSIGTPMPGIDVRI--- 409
Query: 459 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 518
G ++VRG VM+GYF T + EDGWL TGD G + +
Sbjct: 410 --------GEDDEIQVRGPIVMKGYFNQQEETTRTFTEDGWLRTGDAGKLDEN------- 454
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
G L + R KD + S G+ V P +E + I + VI ++ A+IVP
Sbjct: 455 ---GNLFITERLKDLMKTSNGKYVAPQMIESTLGQDRFIEHVAVIADARKFVSALIVPCY 511
Query: 579 EEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 617
+ + AK +++ + D EL I ++ + K K
Sbjct: 512 DALEEYAKSVNLKYHDRVELLSNSHIVAMFEQRLKEIQK 550
>gi|422548906|ref|ZP_16624714.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
gi|314919015|gb|EFS82846.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
Length = 646
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 252/543 (46%), Gaps = 70/543 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAVVRVIITAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 150 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 198
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 199 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 256
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D LS LP H E + G + + + L +P +SVP +YE
Sbjct: 257 --DHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQ 314
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ S + ++ + S A+ + IRI E + + ++PS L
Sbjct: 315 VMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LR 358
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGY 422
AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GY
Sbjct: 359 AR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGY 409
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SP+++ P G+ G P+ +++ E E+L RG VM+G
Sbjct: 410 GLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKG 458
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 459 YWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNI 507
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E + ++ L V++G ++ ++ P +V A+RL I E+ + +
Sbjct: 508 SPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSE 567
Query: 603 TIS 605
++
Sbjct: 568 ELA 570
>gi|422474360|ref|ZP_16550827.1| AMP-binding enzyme [Propionibacterium acnes HL056PA1]
gi|313834161|gb|EFS71875.1| AMP-binding enzyme [Propionibacterium acnes HL056PA1]
Length = 646
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 252/543 (46%), Gaps = 70/543 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 150 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 198
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 199 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 256
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D LS LP H E + G + + + L +P +SVP +YE
Sbjct: 257 --DPSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQ 314
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ S + ++ + S A+ + IRI E + + ++PS L
Sbjct: 315 VMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LR 358
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGY 422
AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GY
Sbjct: 359 AR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLFVCQGY 409
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SP+++ P G+ G P+ +++ E E+L RG VM+G
Sbjct: 410 GLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKG 458
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 459 YWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNI 507
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E + ++ L V++G ++ ++ P +V A+RL I E+ + +
Sbjct: 508 SPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSE 567
Query: 603 TIS 605
++
Sbjct: 568 ELA 570
>gi|422386656|ref|ZP_16466773.1| AMP-binding family protein [Propionibacterium acnes HL096PA2]
gi|422391630|ref|ZP_16471710.1| AMP-binding family protein [Propionibacterium acnes HL099PA1]
gi|422423836|ref|ZP_16500787.1| AMP-binding enzyme [Propionibacterium acnes HL043PA1]
gi|422461080|ref|ZP_16537714.1| AMP-binding enzyme [Propionibacterium acnes HL038PA1]
gi|422476097|ref|ZP_16552536.1| AMP-binding enzyme [Propionibacterium acnes HL007PA1]
gi|422484550|ref|ZP_16560927.1| AMP-binding enzyme [Propionibacterium acnes HL043PA2]
gi|422519280|ref|ZP_16595342.1| AMP-binding enzyme [Propionibacterium acnes HL074PA1]
gi|422520156|ref|ZP_16596198.1| AMP-binding enzyme [Propionibacterium acnes HL045PA1]
gi|422525234|ref|ZP_16601236.1| AMP-binding enzyme [Propionibacterium acnes HL083PA1]
gi|422527685|ref|ZP_16603672.1| AMP-binding enzyme [Propionibacterium acnes HL053PA1]
gi|422558837|ref|ZP_16634570.1| AMP-binding enzyme [Propionibacterium acnes HL005PA1]
gi|313771576|gb|EFS37542.1| AMP-binding enzyme [Propionibacterium acnes HL074PA1]
gi|313811973|gb|EFS49687.1| AMP-binding enzyme [Propionibacterium acnes HL083PA1]
gi|313832408|gb|EFS70122.1| AMP-binding enzyme [Propionibacterium acnes HL007PA1]
gi|314975073|gb|EFT19168.1| AMP-binding enzyme [Propionibacterium acnes HL053PA1]
gi|314977483|gb|EFT21578.1| AMP-binding enzyme [Propionibacterium acnes HL045PA1]
gi|314985862|gb|EFT29954.1| AMP-binding enzyme [Propionibacterium acnes HL005PA1]
gi|315096886|gb|EFT68862.1| AMP-binding enzyme [Propionibacterium acnes HL038PA1]
gi|327333002|gb|EGE74734.1| AMP-binding family protein [Propionibacterium acnes HL096PA2]
gi|327448709|gb|EGE95363.1| AMP-binding enzyme [Propionibacterium acnes HL043PA1]
gi|327449097|gb|EGE95751.1| AMP-binding enzyme [Propionibacterium acnes HL043PA2]
gi|328762201|gb|EGF75697.1| AMP-binding family protein [Propionibacterium acnes HL099PA1]
Length = 646
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 254/545 (46%), Gaps = 74/545 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 90 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 149
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 150 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 198
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 199 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 256
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVY 301
D LS LP H E + G + T V N K L +P +SVP +Y
Sbjct: 257 --DHSLSFLPLSHALEWGWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLY 312
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E + S + ++ + S A+ + IRI E + + ++PS
Sbjct: 313 EQVMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------ 356
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQV 420
L AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V
Sbjct: 357 LRAR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLFVCQ 407
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYGLTE+SP+++ P G+ G P+ +++ E E+L RG VM
Sbjct: 408 GYGLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVM 456
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GY+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+
Sbjct: 457 KGYWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGK 505
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
N+ P +E + ++ L V++G ++ ++ P +V A+RL I E+ +
Sbjct: 506 NISPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLR 565
Query: 601 EKTIS 605
+ ++
Sbjct: 566 SEELA 570
>gi|22127515|ref|NP_670938.1| fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45443377|ref|NP_994916.1| AMP-binding protein [Yersinia pestis biovar Microtus str. 91001]
gi|51595024|ref|YP_069215.1| AMP-binding protein [Yersinia pseudotuberculosis IP 32953]
gi|108809552|ref|YP_653468.1| AMP-binding protein [Yersinia pestis Antiqua]
gi|108810571|ref|YP_646338.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|145600359|ref|YP_001164435.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|150260427|ref|ZP_01917155.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167401298|ref|ZP_02306798.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167469510|ref|ZP_02334214.1| AMP-binding enzyme-family protein [Yersinia pestis FV-1]
gi|186894030|ref|YP_001871142.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|218927734|ref|YP_002345609.1| AMP-binding protein [Yersinia pestis CO92]
gi|229837070|ref|ZP_04457235.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|229840427|ref|ZP_04460586.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843031|ref|ZP_04463181.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900762|ref|ZP_04515886.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|384137474|ref|YP_005520176.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|384416401|ref|YP_005625763.1| AMP-binding protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420545020|ref|ZP_15043194.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|420550334|ref|ZP_15047944.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|420555787|ref|ZP_15052795.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|420561464|ref|ZP_15057743.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|420566471|ref|ZP_15062259.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|420572138|ref|ZP_15067409.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|420582818|ref|ZP_15077101.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|420587923|ref|ZP_15081705.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|420593235|ref|ZP_15086488.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|420598921|ref|ZP_15091580.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|420604497|ref|ZP_15096554.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|420609782|ref|ZP_15101353.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|420615044|ref|ZP_15106032.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|420620500|ref|ZP_15110796.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|420625532|ref|ZP_15115359.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|420630690|ref|ZP_15120043.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|420635875|ref|ZP_15124675.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|420641460|ref|ZP_15129713.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|420646547|ref|ZP_15134377.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|420652230|ref|ZP_15139474.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|420657678|ref|ZP_15144390.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|420663015|ref|ZP_15149150.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|420668037|ref|ZP_15153693.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|420673306|ref|ZP_15158487.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|420678810|ref|ZP_15163495.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|420684045|ref|ZP_15168199.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|420689220|ref|ZP_15172794.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|420695043|ref|ZP_15177883.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|420700318|ref|ZP_15182477.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|420706458|ref|ZP_15187366.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|420711740|ref|ZP_15192153.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|420717110|ref|ZP_15196904.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|420722753|ref|ZP_15201715.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|420728388|ref|ZP_15206728.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|420733504|ref|ZP_15211337.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|420738945|ref|ZP_15216250.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|420744173|ref|ZP_15220912.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|420750096|ref|ZP_15225911.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|420755178|ref|ZP_15230426.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|420761232|ref|ZP_15235264.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|420766406|ref|ZP_15239947.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|420771448|ref|ZP_15244459.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|420776756|ref|ZP_15249244.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|420782266|ref|ZP_15254076.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|420787696|ref|ZP_15258841.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|420793160|ref|ZP_15263766.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|420798314|ref|ZP_15268393.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|420803697|ref|ZP_15273239.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|420808871|ref|ZP_15277923.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|420814663|ref|ZP_15283110.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|420819812|ref|ZP_15287780.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|420824891|ref|ZP_15292321.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|420830684|ref|ZP_15297549.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|420835490|ref|ZP_15301881.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|420840652|ref|ZP_15306562.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|420846242|ref|ZP_15311620.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|420851582|ref|ZP_15316374.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|420857161|ref|ZP_15321079.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|421761966|ref|ZP_16198766.1| AMP-binding protein [Yersinia pestis INS]
gi|21960614|gb|AAM87189.1|AE013966_6 putative fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45438246|gb|AAS63793.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51588306|emb|CAH19914.1| putative AMP-binding enzyme-family protein [Yersinia
pseudotuberculosis IP 32953]
gi|108774219|gb|ABG16738.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|108781465|gb|ABG15523.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Antiqua]
gi|115346345|emb|CAL19217.1| putative AMP-binding enzyme-family protein [Yersinia pestis CO92]
gi|145212055|gb|ABP41462.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|149289835|gb|EDM39912.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167049323|gb|EDR60731.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|186697056|gb|ACC87685.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|229682101|gb|EEO78193.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|229689907|gb|EEO81966.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696793|gb|EEO86840.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706013|gb|EEO92022.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|320016905|gb|ADW00477.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342852603|gb|AEL71156.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|391432113|gb|EIQ93589.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|391433167|gb|EIQ94530.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|391435766|gb|EIQ96791.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|391448197|gb|EIR08035.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|391448895|gb|EIR08667.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|391451533|gb|EIR11019.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|391465843|gb|EIR23991.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|391467875|gb|EIR25809.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|391481271|gb|EIR37826.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|391482068|gb|EIR38548.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|391482202|gb|EIR38664.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|391496452|gb|EIR51400.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|391496986|gb|EIR51887.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|391500587|gb|EIR55077.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|391512101|gb|EIR65445.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|391513827|gb|EIR67003.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|391515786|gb|EIR68742.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|391527621|gb|EIR79521.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|391530383|gb|EIR81965.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|391531818|gb|EIR83278.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|391544753|gb|EIR94930.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|391546312|gb|EIR96317.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|391547089|gb|EIR97021.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|391560924|gb|EIS09511.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|391562030|gb|EIS10489.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|391564074|gb|EIS12318.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|391576223|gb|EIS22813.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|391576897|gb|EIS23389.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|391588442|gb|EIS33471.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|391591017|gb|EIS35651.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|391592228|gb|EIS36684.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|391605408|gb|EIS48299.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|391606856|gb|EIS49534.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|391607670|gb|EIS50245.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|391619729|gb|EIS60965.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|391620669|gb|EIS61801.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|391628887|gb|EIS68892.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|391631216|gb|EIS70875.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|391642571|gb|EIS80829.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|391645313|gb|EIS83204.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|391647623|gb|EIS85234.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|391655007|gb|EIS91790.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|391661827|gb|EIS97834.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|391666695|gb|EIT02118.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|391668514|gb|EIT03741.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|391672685|gb|EIT07473.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|391686125|gb|EIT19587.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|391687645|gb|EIT20934.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|391688868|gb|EIT22051.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|391700243|gb|EIT32355.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|391703587|gb|EIT35324.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|391704373|gb|EIT36037.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|391714573|gb|EIT45215.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|391719942|gb|EIT50005.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|391720466|gb|EIT50486.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|391731130|gb|EIT59870.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|391733565|gb|EIT61929.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|391737148|gb|EIT65062.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|411178288|gb|EKS48300.1| AMP-binding protein [Yersinia pestis INS]
Length = 601
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/580 (25%), Positives = 270/580 (46%), Gaps = 85/580 (14%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++++ + + L +G +E++ +F++NS W + D +L ++V + +++ +
Sbjct: 41 QQIDEHVTRISTALLSLGAAIQERIGIFANNSMAWSLVDLAILQLRGVSVPLYATNTAAQ 100
Query: 114 LLHIYNHSESVALAV-ENPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
+I N ++ L V E +F I + LC + A II+L
Sbjct: 101 AAYIVNDADVRILFVGEQSQFDIAITLQPLCPQLA--HIIVL------------------ 140
Query: 172 SYDEIIDL-GRESRKAFSDSNDARKHY---------KYETIGSDDIATYVYTSGTTGNPK 221
D +DL G E + +D ++ + E DD+ T +YTSGTTG PK
Sbjct: 141 --DPAVDLRGCEYAQHLADFEQQQQPDTVQQHLLTTRIEGCDLDDLFTLIYTSGTTGEPK 198
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GVML ++N+ Q+ + D LS LP HV+ERA +++ G + +Y +RN
Sbjct: 199 GVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAWSFYVMHTGAQNVY--IRN 256
Query: 282 ---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
++ +Q +P M +VP YE ++S I ++ + +RV+ + FKR
Sbjct: 257 TDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRVLFHW--AVGCGERKFKR 314
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS 398
+ +G +P + WL + ++ LA++LV +K++ +G +
Sbjct: 315 LQQG--------RP------LPWLSEQ--------MYTLADRLVLRKLRGVLGGRVRFLP 352
Query: 399 GGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
G+ L +I LF++AIGV ++ GYG+TE+ ++ GS+G P+ ++++
Sbjct: 353 AAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSCWEEQNFRFGSIGKPLPGIDVRL-- 410
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G++ ++VRG VM+GYFK P T +A EDGWL TGD G +
Sbjct: 411 ---------GAENEIQVRGPIVMRGYFKKPQETLEAFTEDGWLKTGDAGALDAQ------ 455
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G L + R KD + S G+ + P +E + I Q+ +I ++ A+IVP
Sbjct: 456 ----GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPS 511
Query: 578 KEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 617
E + A+ +++ + D EL + I ++ + K K
Sbjct: 512 FESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLKEIQK 551
>gi|162421030|ref|YP_001607310.1| AMP binding protein [Yersinia pestis Angola]
gi|165928221|ref|ZP_02224053.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937755|ref|ZP_02226316.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009084|ref|ZP_02229982.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212014|ref|ZP_02238049.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167422015|ref|ZP_02313768.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426467|ref|ZP_02318220.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270487868|ref|ZP_06204942.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294502628|ref|YP_003566690.1| AMP binding protein [Yersinia pestis Z176003]
gi|384121062|ref|YP_005503682.1| AMP binding protein [Yersinia pestis D106004]
gi|384124940|ref|YP_005507554.1| AMP binding protein [Yersinia pestis D182038]
gi|420577414|ref|ZP_15072171.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
gi|162353845|gb|ABX87793.1| AMP binding protein [Yersinia pestis Angola]
gi|165914167|gb|EDR32783.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919832|gb|EDR37133.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992423|gb|EDR44724.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206760|gb|EDR51240.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960152|gb|EDR56173.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167054565|gb|EDR64373.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262360658|gb|ACY57379.1| AMP binding protein [Yersinia pestis D106004]
gi|262364604|gb|ACY61161.1| AMP binding protein [Yersinia pestis D182038]
gi|270336372|gb|EFA47149.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294353087|gb|ADE63428.1| AMP binding protein [Yersinia pestis Z176003]
gi|391464203|gb|EIR22517.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
Length = 588
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/580 (25%), Positives = 270/580 (46%), Gaps = 85/580 (14%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++++ + + L +G +E++ +F++NS W + D +L ++V + +++ +
Sbjct: 28 QQIDEHVTRISTALLSLGAAIQERIGIFANNSMAWSLVDLAILQLRGVSVPLYATNTAAQ 87
Query: 114 LLHIYNHSESVALAV-ENPEFFNRIA-ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
+I N ++ L V E +F I + LC + A II+L
Sbjct: 88 AAYIVNDADVRILFVGEQSQFDIAITLQPLCPQLA--HIIVL------------------ 127
Query: 172 SYDEIIDL-GRESRKAFSDSNDARKHY---------KYETIGSDDIATYVYTSGTTGNPK 221
D +DL G E + +D ++ + E DD+ T +YTSGTTG PK
Sbjct: 128 --DPAVDLRGCEYAQHLADFEQQQQPDTVQQHLLTTRIEGCDLDDLFTLIYTSGTTGEPK 185
Query: 222 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 281
GVML ++N+ Q+ + D LS LP HV+ERA +++ G + +Y +RN
Sbjct: 186 GVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAWSFYVMHTGAQNVY--IRN 243
Query: 282 ---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
++ +Q +P M +VP YE ++S I ++ + +RV+ + FKR
Sbjct: 244 TDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRVLFHW--AVGCGERKFKR 301
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS 398
+ +G +P + WL + ++ LA++LV +K++ +G +
Sbjct: 302 LQQG--------RP------LPWLSEQ--------MYTLADRLVLRKLRGVLGGRVRFLP 339
Query: 399 GGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 457
G+ L +I LF++AIGV ++ GYG+TE+ ++ GS+G P+ ++++
Sbjct: 340 AAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSCWEEQNFRFGSIGKPLPGIDVRL-- 397
Query: 458 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 517
G++ ++VRG VM+GYFK P T +A EDGWL TGD G +
Sbjct: 398 ---------GAENEIQVRGPIVMRGYFKKPQETLEAFTEDGWLKTGDAGALDAQ------ 442
Query: 518 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
G L + R KD + S G+ + P +E + I Q+ +I ++ A+IVP
Sbjct: 443 ----GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPS 498
Query: 578 KEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 617
E + A+ +++ + D EL + I ++ + K K
Sbjct: 499 FESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLKEIQK 538
>gi|390949390|ref|YP_006413149.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
gi|390425959|gb|AFL73024.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
Length = 608
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 157/582 (26%), Positives = 259/582 (44%), Gaps = 66/582 (11%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
FR+ R D VA R + V ++ + + + + L +G+ P E++++
Sbjct: 24 FRIRVRRTPDLVAYRQFDIAQAQWIDVTWQA-MSERVGQWRRSLATLGLAPGERVAVQLR 82
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
N W+ +Q LA G + V + L +I S+S L VE + +A
Sbjct: 83 NGLDWVGYEQAALALGLVVVPLYPDDNPGNLSYILQDSDSRVLLVETLAQWRALAPLRER 142
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
A+ ++ L + A D+ ++ + D R ++ + +H
Sbjct: 143 FPALTQVLCLEPSGAPPADDL-------TFSSVADFLRH------ETGEPPEHRA----A 185
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
D+AT VYTSGTTG PKGVML+H ++L + +V ++ D FLS LP H +ER
Sbjct: 186 PGDLATIVYTSGTTGRPKGVMLSHFSILWNAEAQLKMVLTDHDDIFLSFLPLSHTFERTV 245
Query: 264 G-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 321
G YF G + Y ++++L++DL +P +ISVP +YE Y+ IQ+++ +
Sbjct: 246 GYYFPMMAGSCVAYARSLQDLREDLLTIRPTVLISVPRIYERAYARIQEKLAEDGRLAQW 305
Query: 322 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 381
+ + + +A F + + P + + L L L
Sbjct: 306 LFSQAVELGWAR---------FLAGQGRGDPPGRLDRL--------------LWRLLRPL 342
Query: 382 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 440
V K+ + +G + +SG L + + +G+ + GYGLTES+P IA NV
Sbjct: 343 VADKVLARLGGRLRIAISGAAPLRAEVARCFIGLGLNLLEGYGLTESAPTIAGNPAEDNV 402
Query: 441 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 500
GS G PI EI+I D G + RG VM GY+K P T+ ++ DGWL
Sbjct: 403 PGSAGVPIPGMEIRIAD-----------NGELLARGPSVMLGYWKRPEETRTMIEPDGWL 451
Query: 501 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 560
+TGD+ + H L + GR KD +V+STGE V +LE L Q
Sbjct: 452 HTGDLAEMRDGH-----------LFIRGRLKDILVMSTGEKVPAGDLERTILEDPWFEQA 500
Query: 561 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
+V+G+ + A++V +++ A LS+ D L ++
Sbjct: 501 LVLGEGRPFVAALLVLERQAWSALAASLSLDADDEGSLGDKR 542
>gi|77164343|ref|YP_342868.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|254434511|ref|ZP_05048019.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
gi|76882657|gb|ABA57338.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|207090844|gb|EDZ68115.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
Length = 601
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 261/574 (45%), Gaps = 77/574 (13%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
F+ R +AVA R + ++ +++ E+ + L + P ++++L
Sbjct: 21 FQERVRRTPNAVAYR-HFDPKQRSWQETTWAEMATEVTRWQAALSKEELNPGDRVALMLR 79
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
NS W+ +Q L + V + + +I ++E L +E + I +
Sbjct: 80 NSREWVFFEQAALGLELVVVPLYINDRPDNVRYILKNAEVKLLMIEGYHQWQEIKQWWAL 139
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR-ESRKAFSDS---NDARKHYKY 199
+ +R V S + D R + R + A KHY
Sbjct: 140 RKLVR---------------------VISLNPFDDEARGQKRLCYLQEWLPKTADKHYP- 177
Query: 200 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 259
+ D +AT VYTSGTTG PKGVML+H N+L S P D FLS LP H
Sbjct: 178 KLNNPDALATIVYTSGTTGLPKGVMLSHHNILWNAHSSLQSTPIYEDDLFLSFLPLSHSL 237
Query: 260 ERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 317
ER GY++ G ++ YT ++ L +DL +P ++SVP ++E +++ QI+
Sbjct: 238 ERTLGYYLPMMAGAQVAYTRSIAKLAEDLVTIKPTVLVSVPRIFERVHN----QIYDKLR 293
Query: 318 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 377
+ ++ RAL +++ A G+ +Q +Y W +C L+ L
Sbjct: 294 EKTLLERALFKLAIA--------AGW------RQFNYQQGRAPW---HPLCL----LNPL 332
Query: 378 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 436
++V +++ + G + V GG L ++ A+G+ + GYGLTE+SPVI+
Sbjct: 333 LRQIVGRQVLAQFGGRLRIVVCGGAPLVFNVARELLALGLPLIQGYGLTEASPVISGNSL 392
Query: 437 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 496
N SVG P+ EI+I E NE+L R VM GY+ NP AT + +DE
Sbjct: 393 NNNDPKSVGTPLQDVEIRI--GEHNELLG---------RSPGVMLGYWNNPKATAEVIDE 441
Query: 497 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 556
+GWL+TGD ++R G L + GR K+ IVL+TGE V P E+E A L
Sbjct: 442 EGWLHTGD-----------QARIEQGRLYITGRIKEIIVLATGEKVPPGEMETAIGTDPL 490
Query: 557 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
Q +V+G+ + A+IV + E A+ L++
Sbjct: 491 FDQAMVVGEGKPYLSALIVVNPEHWNTLAQELNL 524
>gi|148703626|gb|EDL35573.1| acyl-CoA synthetase long-chain family member 1, isoform CRA_a [Mus
musculus]
gi|148703627|gb|EDL35574.1| acyl-CoA synthetase long-chain family member 1, isoform CRA_a [Mus
musculus]
Length = 634
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 256/571 (44%), Gaps = 86/571 (15%)
Query: 58 QEILDFAE----GLRVIGVKP--EEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSS 111
+E+ + AE GL G KP E+ + LFS N W++ +QG + + V +
Sbjct: 60 KEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGA 119
Query: 112 EELLHIYNHSESVALAVENPEFFNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-- 167
+ + +I N +E + + PE + E + +K ++ I+++ S D+VE
Sbjct: 120 DAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIM----DSYGSDLVERGK 175
Query: 168 ---IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+ + S + DLGR +R K + +D+A +TSGTTGNPKG M
Sbjct: 176 KCGVEIISLKALEDLGRVNR------------VKPKPPEPEDLAIICFTSGTTGNPKGAM 223
Query: 225 LTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-- 278
+TH+N+++ I++ A D +S LP H++E + G ++ +
Sbjct: 224 ITHQNIINDCSGFIKATESAFIASTDDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGD 283
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
+R L DDL+ QP VP + ++ I Q A T+ KR
Sbjct: 284 IRLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQ--------------------ANTSLKR 323
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS 398
F R + + + + LW +KL++ KIQS++G K +
Sbjct: 324 WLLDFASKRKEAELRSGIVRNNSLW---------------DKLIFHKIQSSLG-GKVRLM 367
Query: 399 GGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
G+ P+ + A+G + GYG TE + P G VG P+ +K+
Sbjct: 368 ITGAAPVSATVLTFLRTALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYVKL 427
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
VD E L + +G V V+G+ V +GY K+P+ T +ALD+DGWL+TGDIG P+
Sbjct: 428 VDVEEMNYLASKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPN---- 483
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAII 574
G L + R K L+ GE + P ++E LRS + Q+ V G+ Q A++
Sbjct: 484 ------GTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAVV 537
Query: 575 VPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
VPD E + A++ + EL + K I+
Sbjct: 538 VPDVESLPSWAQKRGL-QGSFEELCRNKDIN 567
>gi|365879381|ref|ZP_09418805.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
gi|365292632|emb|CCD91336.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
Length = 641
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 255/551 (46%), Gaps = 74/551 (13%)
Query: 38 RIRISRRNHRFRVFCESKLEQEILDFAEGLRVI----------GVKPEEKLSLFSDNSCR 87
R+ S N +R F ++ L + E RV+ G +P +++++ N
Sbjct: 56 RVGRSPENPAYRHFDAARGAWTSLSWREIDRVVDHWRRALAAEGFEPGDRVAILMPNELA 115
Query: 88 WLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAM 147
L DQ L+ + V + +++ + +I S + L V++ +N IA + +
Sbjct: 116 HLAMDQAALSRALVPVPMHAVDNADSIAYILADSGAQLLLVDSDARWNEIAAVGEALPDL 175
Query: 148 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 207
+ I+ ++S P + + ++ LG A + H D+
Sbjct: 176 KRIVCA-ETQASAGPTDPRIVALDTW-----LGAARHGAAPGAAAIAPH---------DL 220
Query: 208 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 267
A VYTSGTTG PKGVML H N++ +++++ + A + D FLS LP H +ER GY+
Sbjct: 221 AAIVYTSGTTGRPKGVMLPHDNVVSNLKAIHQRLAAASEDVFLSFLPLSHTFERTAGYYY 280
Query: 268 -FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 325
+ G + Y +V+ L +DL +P +ISVP +YE +YS + +S +ARA
Sbjct: 281 PIAIGASVAYARSVKQLPEDLLEVRPTILISVPRIYERIYSLVMHHRAVASP----LARA 336
Query: 326 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 385
L+ ++ A + F + S L L WP L +++V K
Sbjct: 337 LMDMTIAVGGRR-----FDAQHGRGAQSALDRLA------------WP---LLKRIVADK 376
Query: 386 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 444
+ + G + VSGG + + + A+G++V GYG+TE+SPV++ P N +V
Sbjct: 377 VLARFGGRLQVAVSGGAPIAEPVVRLFLALGLEVLQGYGMTETSPVVSVNTPDDNDPRTV 436
Query: 445 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 504
G + E++I G+ + VRG VM GY+ P T + + DGWL+TGD
Sbjct: 437 GRALPGVEVRI-----------GANDELMVRGPNVMLGYWHKPDETARIKEADGWLHTGD 485
Query: 505 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 564
I H R + + GR KD +V STGE + P +LE A L L Q +VIG
Sbjct: 486 QASI--DHGR---------ITITGRIKDILVTSTGEKIAPADLETAILTDPLFEQAIVIG 534
Query: 565 QDQRRPGAIIV 575
+++ AI+V
Sbjct: 535 ENRPFLAAIVV 545
>gi|354605777|ref|ZP_09023752.1| hypothetical protein HMPREF1003_00319 [Propionibacterium sp.
5_U_42AFAA]
gi|353558433|gb|EHC27797.1| hypothetical protein HMPREF1003_00319 [Propionibacterium sp.
5_U_42AFAA]
Length = 644
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 251/543 (46%), Gaps = 70/543 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 148 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 196
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 197 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 254
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D LS LP H E + G + + + L +P +SVP +YE
Sbjct: 255 --DHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQ 312
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ S + ++ + S A+ + IRI E + + ++PS L
Sbjct: 313 VMS-VAREKVSDSPAKLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LR 356
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGY 422
AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GY
Sbjct: 357 AR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGY 407
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SP+++ P G+ G P+ +++ E E+L RG VM+G
Sbjct: 408 GLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKG 456
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 457 YWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNI 505
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E + ++ L V++G ++ ++ P +V A+RL I E+ +
Sbjct: 506 SPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSD 565
Query: 603 TIS 605
++
Sbjct: 566 ELA 568
>gi|115497270|ref|NP_001069553.1| long-chain-fatty-acid--CoA ligase 1 [Bos taurus]
gi|111306969|gb|AAI19915.1| Acyl-CoA synthetase long-chain family member 1 [Bos taurus]
gi|296472428|tpg|DAA14543.1| TPA: long-chain-fatty-acid--CoA ligase 1 [Bos taurus]
Length = 699
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 246/549 (44%), Gaps = 82/549 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG + V +E + +I N +E + V+ PE
Sbjct: 147 PDQFIGIFAQNRPEWVIIEQGCFTYSMVIVPLYDTLGTEAITYIINKAELSLVFVDKPEK 206
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
N + E + +K ++ I+L+ S D++E + + S + DLGR +R+
Sbjct: 207 ANLLLEGVENKLIPCLKTIVLM----DSYGSDLLERGKKCGVEIISMKAMEDLGRANRQ- 261
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----V 241
K + +D+A +TSGTTGNPKG M+TH+N++ + + +
Sbjct: 262 -----------KPKPPVPEDLAVICFTSGTTGNPKGAMITHRNVVSDCSAFVKMTENTFI 310
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 311 PTSD-DTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPR 369
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 370 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRN 409
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGV 416
+ LW +KL++ KIQS++G K + G+ P+ + A+G
Sbjct: 410 NSLW---------------DKLIFHKIQSSLG-GKVRLMITGAAPVSATVLTFLRAALGC 453
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYG TE + G VG P+ + IK+VD E L A +G V V+G
Sbjct: 454 QFYEGYGQTECTAGCCLTVAGDWTAGHVGPPMPCSIIKLVDVEEMNYLAAKGEGEVCVKG 513
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
S V QGY K+P T +ALD+DGWL+TGDIG P+ G L + R K L
Sbjct: 514 SNVFQGYLKDPVKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKL 563
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
+ GE + P ++E RS I Q+ V G+ Q AI+VPD E + A++ IV
Sbjct: 564 AQGEYIAPEKIENIYQRSEPIAQVFVHGESLQAFLIAIVVPDVETLGTWAQKRGIV-GSF 622
Query: 596 SELSKEKTI 604
EL + K +
Sbjct: 623 EELCRNKDV 631
>gi|222111040|ref|YP_002553304.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
gi|221730484|gb|ACM33304.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
Length = 609
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/588 (26%), Positives = 265/588 (45%), Gaps = 61/588 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ ++ + + + G+ ++++ N + DQ ++ATG + V + +
Sbjct: 47 AQTQERVQQWGRAIAASGLPQGARIAILLPNGLDAMSIDQAVMATGCVPVPLHAIDNPGS 106
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE-IPVFS 172
+ +I +E L VE PE + RI + + ++ S+ P E+ +PV
Sbjct: 107 IAYILADAEVSLLVVEEPEQWRRIRDVGMPLPHLMGVVTT--NASTGLPTAAEQDVPVAP 164
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
L + A +D+ +D+A VYTSGTTG PKGVML+H N++
Sbjct: 165 ------LAAWLQHAAADTPLPPPPG------PEDLAAIVYTSGTTGKPKGVMLSHANVVA 212
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
++++ + + D FLS LP H +ER GY++ + G ++Y +V L +DL+ +
Sbjct: 213 DVKAVLERIAPTPQDVFLSFLPLSHTFERTGGYYLPMASGSCVVYARSVAQLAEDLKNVR 272
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P ++SVP +YE +++ + + + S +++ A ++ FC +
Sbjct: 273 PTVLVSVPRIYERVHAKLIETLSPSP----------LKMQLFQAAQAVGWKRFCAAQRLP 322
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
P A W R A+ WP L LV K + + G + VSGG L I
Sbjct: 323 APQDDGA---GGWMR---ALPWP---LLRALVAKPLLAQFGGRVRVAVSGGAPLSPTIAH 373
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
+ +G+++ GYG+TE++PV++ N +VG + E++I G
Sbjct: 374 CFLGLGLQLVQGYGMTETTPVVSVNTLEDNDPSTVGRALPGVEVRI-----------GEN 422
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
++VRG VM+GY+K P T + + DGWL TGD I GR R + GR
Sbjct: 423 RELQVRGPIVMKGYWKRPEDTARTVSADGWLGTGDQAEIV----DGRIR-------ILGR 471
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
K+ IV STGE V P +LE A +L Q V+G+ + + V EE A +L
Sbjct: 472 IKEIIVTSTGEKVPPADLELAITADALFEQAFVVGEQRPFIACVAVVHAEEWRQLAGQLG 531
Query: 590 IVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 635
+ D + L+ + K + P +H+V EP+T+
Sbjct: 532 LDANDPASLAHPSAQRAALARIEKLAAGFPRYAVPRAVHLVREPWTIE 579
>gi|343503670|ref|ZP_08741479.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
gi|342814262|gb|EGU49209.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
Length = 602
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 263/578 (45%), Gaps = 84/578 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT-GAINVVRGSRSSSEELLHIYNHS 121
A+GLRV ++K+ +FS+N +W VAD L T G I + + ++++ + N
Sbjct: 53 LAQGLRV-----QDKIGIFSNNMPQWTVADIATLQTRGVIVPIYPTSTAAQSAYILQNAD 107
Query: 122 ESVALAVENPEFFNRIA-----ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
V E P+F ++ E L AM I L G +V S+ +
Sbjct: 108 VKVLFVGEQPQFDLAVSIFEQCEQLELIVAMSDDIDLQGHTFAV-----------SWQDF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
I G E+ +A + + DD+ T +YTSGTTG PKGVML + N+ Q++
Sbjct: 157 IARGNEAHQA-------ELQLRLDDANLDDLLTLIYTSGTTGQPKGVMLDYANIGAQLQG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ RG Y ++D L +P M
Sbjct: 210 HDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVRDALSEIRPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+V+ F + C ++ ++PS +
Sbjct: 270 AVPRFYEKIFSAIHEKVSKAPFIRKVL--------FTWAVNMGAKMAVC-HQDGRKPSLM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAI 414
L + LA+KLV K+++ +G + GG L I F+ AI
Sbjct: 321 ---------------LKKSYKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + ++KI E NE+L V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDKCFDPASIGMSMPGAQVKI--GENNEIL---------V 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T Q DE G+L TGD G I + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHD 524
Query: 595 ASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
EL K E ++ L EL K+ F++ P
Sbjct: 525 RVELIKHHQIVEMLESRVNDLQKELAKFEQVKKFKLLP 562
>gi|563831|gb|AAA52193.1| long chain fatty acyl CoA synthetase [Mus musculus]
Length = 699
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 255/571 (44%), Gaps = 86/571 (15%)
Query: 58 QEILDFAE----GLRVIGVKP--EEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSS 111
+E+ + AE GL G KP E+ + LFS N W++ +QG + + V +
Sbjct: 125 KEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGA 184
Query: 112 EELLHIYNHSESVALAVENPEFFNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-- 167
+ + +I N +E + + PE + E + +K ++ I+++ S D+VE
Sbjct: 185 DAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIM----DSYGSDLVERGK 240
Query: 168 ---IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 224
+ + S + DLGR +R K + +D+A +TSGTTGNPKG M
Sbjct: 241 KCGVEIISLKALEDLGRVNR------------VKPKPPEPEDLAIICFTSGTTGNPKGAM 288
Query: 225 LTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-- 278
+TH+N+++ I++ A D +S LP H++E + G ++ +
Sbjct: 289 ITHQNIINDCSGFIKATESAFIASTDDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGD 348
Query: 279 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 338
+R L DDL+ QP VP + ++ I Q A T+ KR
Sbjct: 349 IRLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQ--------------------ANTSLKR 388
Query: 339 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS 398
F R + + + LW +KL++ KIQS++G K +
Sbjct: 389 WLLDFASKRKEADVRSGIVRNNSLW---------------DKLIFHKIQSSLG-GKVRLM 432
Query: 399 GGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
G+ P+ + A+G + GYG TE + P G VG P+ +K+
Sbjct: 433 ITGAAPVSATVLTFLRTALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYVKL 492
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
VD E L + +G V V+G+ V +GY K+P+ T +ALD+DGWL+TGDIG P+
Sbjct: 493 VDVEEMNYLASKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPN---- 548
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAII 574
G L + R K L+ GE + P ++E LRS + Q+ V G+ Q A++
Sbjct: 549 ------GTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAVV 602
Query: 575 VPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
VPD E + A++ + EL + K I+
Sbjct: 603 VPDVESLPSWAQKRGL-QGSFEELCRNKDIN 632
>gi|431931379|ref|YP_007244425.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
gi|431829682|gb|AGA90795.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
Length = 606
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 236/525 (44%), Gaps = 82/525 (15%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ E L G++ ++++L N W+ D L+ G + V + E ++I S
Sbjct: 59 WREALAAEGLRRGDRVALLLRNCPEWVFFDLAALSLGLVTVPLYTDDRPENAVYIIEDSA 118
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ V++ + RIA L + +ILL D G +
Sbjct: 119 VKVMLVQDAGRWRRIAGVLGERPNPVRVILL------------------------DPGGD 154
Query: 183 SRKAFSDSNDARKHYKYETIGS----------DDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+R+ D + IG D++AT VYTSGTTG PKGVML+H+N+L
Sbjct: 155 ARRVARDDPRVVLAQDWLPIGGAKIVQRDGDPDELATIVYTSGTTGRPKGVMLSHRNILF 214
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQ 290
+ I+ D FLS LP H+ ER GY++ G + Y+ +V + +DLQ +
Sbjct: 215 DAHASLTIIDCYQEDAFLSFLPLSHMLERTGGYYLPMMAGSVVAYSRSVGQIAEDLQAIR 274
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P MI+VP ++E +Y+ + +QI + R + +RI + + G+
Sbjct: 275 PTAMIAVPRIFERVYTRLHEQIQGRPRSVRALFHLAVRIGWMRFEHGQGRRGWSPLLLLW 334
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLF 410
+ +++ + + G + VSGG ++P +
Sbjct: 335 PLLH------------------------KRVAGRVLDKLGGRLRVAVSGGAAMPTEVAHL 370
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ +G+ + GYGLTE+SPV++ N SVG P+ +++I D +E+L
Sbjct: 371 FIGLGLPIVQGYGLTETSPVVSVNSLQDNRPESVGIPLRGIQVRIGD--DDELL------ 422
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
V+G M GY+ N +AT + +D GWL+TGD ++R G + + GR
Sbjct: 423 ---VKGPGNMLGYWNNHAATARMVDPAGWLHTGD-----------QARIEQGYIYITGRI 468
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
KD +VLS GE V P ++E A L+ Q++V+G+ + GA++V
Sbjct: 469 KDILVLSNGEKVPPADMEMAIGLDPLVEQVLVVGEGRPFLGALVV 513
>gi|395839942|ref|XP_003792830.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 2 [Otolemur
garnettii]
Length = 698
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/531 (28%), Positives = 237/531 (44%), Gaps = 79/531 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVVVPLYDTLGTEAITYIVNKAELSLIFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + V S + DLGR +R+
Sbjct: 206 ARLLLEGIENKLTPCLKIIVLM----DTFGSELVERGKKCGVEVTSMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ ++ ++
Sbjct: 261 -----------KPKPPAPEDLAVVCFTSGTTGNPKGAMITHQNVVSDCSAFVKMTEKVLA 309
Query: 243 AENGDKFLSMLPPWHVYERA--CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ C I +R L DDL+ QP VP +
Sbjct: 310 LNASDTHISFLPLAHMYEQLMLCVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVK 417
LW +KL++ KIQS++G K + G+ P+ + A+G +
Sbjct: 410 SLW---------------DKLIFHKIQSSLG-GKVRLMVTGAAPVSATVLTFLRAALGCQ 453
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + P G VG P+ IK+VD E + A +G V V+G+
Sbjct: 454 FYEGYGQTECTAGCCLTVPGDWTAGHVGAPMPCNFIKLVDVEEMNYMAAKGEGEVCVKGA 513
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 514 NVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 563
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKR 587
GE + P ++E LRS I Q+ V G+ Q AI+VPD E + A++
Sbjct: 564 QGEYIAPEKIENIYLRSEPIAQVFVHGESLQAFLIAIVVPDVETLSSWAQK 614
>gi|417930836|ref|ZP_12574210.1| AMP-binding enzyme [Propionibacterium acnes SK182]
gi|340769741|gb|EGR92263.1| AMP-binding enzyme [Propionibacterium acnes SK182]
Length = 644
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/543 (27%), Positives = 251/543 (46%), Gaps = 70/543 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 148 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 196
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 197 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 254
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 303
D LS LP H E + G + + + L +P +SVP +YE
Sbjct: 255 --DHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQ 312
Query: 304 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 363
+ S AR V+ + +++ + + E + + ++PS L
Sbjct: 313 VMS----------VAREKVSDSPVKLKIFEWSIRIGREWWQAEQEGRRPSVS------LR 356
Query: 364 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGY 422
AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GY
Sbjct: 357 AR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLFVCQGY 407
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
GLTE+SP+++ P G+ G P+ +++ E E+L RG VM+G
Sbjct: 408 GLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKG 456
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+
Sbjct: 457 YWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNI 505
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P +E + ++ L V++G ++ ++ P +V A+RL I E+ + +
Sbjct: 506 SPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSE 565
Query: 603 TIS 605
++
Sbjct: 566 ELA 568
>gi|403285130|ref|XP_003933891.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 698
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 244/548 (44%), Gaps = 80/548 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V SE + +I N +E + V+ PE
Sbjct: 146 PDQCVGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGSEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + V S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVLM----DAYGSELVERGKKCGVEVISMKAMEDLGRTNRQ- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-----IV 241
K + +D+A +TSGTTGNPKG ++TH+N++ + ++
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGALITHRNVVSDCSAFVKMTENTVI 309
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPL 299
P + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 310 PCPD-DILISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPR 368
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+ ++ I Q A T KR F R + + +
Sbjct: 369 LLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIVRN 408
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVK 417
+ LW +KL++ KIQS++G + ++G + + F A +G +
Sbjct: 409 NSLW---------------DKLIFHKIQSSLGGRVRLMITGAAPVSATVLTFLRAALGCQ 453
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 454 FYEGYGQTECTAGCCLTVPGDWTAGHVGAPMPCNWIKLVDVEEMNYMAAKGEGEVCVKGP 513
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V QGY K P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 514 NVFQGYLKEPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 563
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GE + P ++E LRS + Q+ V G+ Q AI+VPD E+L + R
Sbjct: 564 QGEYIAPEKIENIYLRSEPVAQVFVHGESLQAFLIAIVVPD-SEILCSWARKRGFDGSFE 622
Query: 597 ELSKEKTI 604
EL + K +
Sbjct: 623 ELCRNKDV 630
>gi|254508749|ref|ZP_05120862.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
gi|219548328|gb|EED25340.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
Length = 602
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 159/590 (26%), Positives = 257/590 (43%), Gaps = 93/590 (15%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + + L G + ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDELSLALLAQGFQVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP----VFS 172
+ N V E P+F A I EE + +
Sbjct: 103 LQNADVKVLFVGEQPQF-------------------------DAAVSIFEECEQLELIVA 137
Query: 173 YDEIIDLGRESR----KAFSDSNDARKHYKYETIGSD----DIATYVYTSGTTGNPKGVM 224
E ID+G K F D ++ ++ E SD D+ T +YTSGTTG PKGVM
Sbjct: 138 MSESIDIGENEFALHWKQFVAKGDKQESHELEQRLSDANFDDLLTLIYTSGTTGQPKGVM 197
Query: 225 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLK 283
L + N+ Q+ + D L LP HV+ERA +++ +G Y ++
Sbjct: 198 LDYANIGAQLEGHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVR 257
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 343
D L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 258 DALSEVRPTVMSAVPRFYEKIFSAIHEKVAKAPFIRKVM--------FTWAVNMGAKMAV 309
Query: 344 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGS 402
C +K PS L + LA+KLV K+++ +G + GG
Sbjct: 310 CHQEGRK-PSL---------------ALKKAYKLADKLVLSKLRALLGGRINFMPCGGAK 353
Query: 403 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 462
L I F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E NE
Sbjct: 354 LDETIGRFFHAIGINVKLGYGMTETTATISCWDDQCFNPDSIGMAMPGAQVKI--GENNE 411
Query: 463 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 522
+L VRG VM+GY+K P T + DE G+L TGD G I + G
Sbjct: 412 IL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHIDEN----------G 452
Query: 523 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 582
L + R K+ + S G+ + P +E + I QI VI ++ A+IVP + +
Sbjct: 453 NLFITDRIKELMKTSNGKYIAPQMVEGTIGKDHFIEQIAVIADTRKFVSALIVPCFDSLE 512
Query: 583 MAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 624
AK L+I + D EL K E+ ++ L EL K+ F++ P
Sbjct: 513 EYAKELNIKYHDRVELIKHHQIVEMLEQRVNDLQKELAKFEQVKKFKLLP 562
>gi|433648555|ref|YP_007293557.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium smegmatis
JS623]
gi|433298332|gb|AGB24152.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium smegmatis
JS623]
Length = 598
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 239/534 (44%), Gaps = 73/534 (13%)
Query: 50 VFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRS 109
V C+ Q I A GL GV+ +++++FS W + D +LA GA+ V S
Sbjct: 46 VTCKEAANQ-IRSAALGLIAEGVRAGDRVAVFSATRYEWPILDLAILAVGALTVPIYETS 104
Query: 110 SSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP 169
S+E++ + S +V + E ++I ++R + + G + + E
Sbjct: 105 SAEQVRFVLQDSAAVLIFAETDAHADKIEHLEKELPSLRKVYRIDGSGTPALEALTEAGK 164
Query: 170 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
E+ D + I S AT +YTSGTTG PKG LTH N
Sbjct: 165 SVDPKELDD-------------------RLAGISSAAPATLIYTSGTTGRPKGCQLTHSN 205
Query: 230 LLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 286
L+++IR D PA + G++ L LP HV RA F+ + L +T+ ++NL
Sbjct: 206 LMYEIRGAKDCFPALLDKGERMLVFLPLAHVLARAITLACFANKVTLGFTSDIKNLVPTF 265
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
++P ++SVP V+E +Y+ ++ + + + + + Y+
Sbjct: 266 GVFKPTLVVSVPRVFEKVYNTAEQN--ARNDGKGAIFERAVNTAIEYS------------ 311
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
Q Q S L+ L H L ++LVY K+++A+G + + +SGG L
Sbjct: 312 --QAQDSGGAGLL-----------LRAKHALFDRLVYGKLRAALGGNCRGAISGGAPLGA 358
Query: 406 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
+ FY +G+ + GYGLTE+S I R +GSVG + +++ D +E+L
Sbjct: 359 RLGHFYRGVGLTIYEGYGLTETSAAITVNRIDDVKVGSVGKLVPGNSMRLAD--DDELL- 415
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
V+G V GY+ N T +A+ DGW +TGD+G I G L
Sbjct: 416 --------VKGGVVFSGYWHNEEET-EAVFSDGWFHTGDLGAIDDD----------GFLT 456
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
+ GR K+ IV + G+NV P LE+ LI Q + +G Q A+I D E
Sbjct: 457 IVGRKKEIIVTAGGKNVAPALLEDRLRAHPLISQAMCVGDAQPFIAALITIDPE 510
>gi|350568435|ref|ZP_08936837.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
avidum ATCC 25577]
gi|348661655|gb|EGY78338.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
avidum ATCC 25577]
Length = 644
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/540 (25%), Positives = 246/540 (45%), Gaps = 64/540 (11%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G + V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFAGNCPEWIEADLAGMTIGVVPVPIYPTSTPDQIVHIVTDAGIRVIVTAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + ++L+ D + + ++ L + + S+
Sbjct: 148 PKELDRILEARDQMPCLETVVLI---------DPADRVGDHDGLTVLSLEQVRQAGVSEE 198
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGD 247
+ +DD+A +YTSGTTG PKGVM++H+ L ++++L +D PA D
Sbjct: 199 MQPVVEERMRQSCADDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDFTPA---D 255
Query: 248 KFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 306
LS LP H E + G + + + + L +P +SVP +YE +
Sbjct: 256 HSLSFLPLSHALEWGWSMVVIRHGCLNTFVPNPKTISEMLAEVRPTLFVSVPKLYEQVMK 315
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
AR VA + ++ + + E + ++ ++PS L AR
Sbjct: 316 ----------VAREKVADSPAKLKIFEWSLEVGREWWQTKQDGRRPSVS------LEAR- 358
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLT 425
H +A++LV K I+ A+G K ++ GG+ L ++ F+ A G+ V GYGLT
Sbjct: 359 --------HKVADRLVLKAIRDAVGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLT 410
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E+SP+++ P G+ G P+ + + D G + RG +M+GY+K
Sbjct: 411 EASPLVSFNSPGGCKFGTAGRPLVGSRMSTTD-----------DGEILYRGPNIMKGYWK 459
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
P T A+ EDGWL+TGDIG+I G LV+ R KD IV G+N+ P
Sbjct: 460 APEETAAAI-EDGWLHTGDIGYIDDD----------GFLVITDRLKDIIVTLNGKNISPQ 508
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
+E + ++ L V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 509 PIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEEIAERLHISSMTGPEMLRSEELA 568
>gi|295131759|ref|YP_003582422.1| AMP-binding enzyme [Propionibacterium acnes SK137]
gi|291376420|gb|ADE00275.1| AMP-binding enzyme [Propionibacterium acnes SK137]
Length = 644
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 253/545 (46%), Gaps = 74/545 (13%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLF+ N W+ AD + G I V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFAGNCPEWIEADLAGMTIGVIPVPIYPTSTPDQIVHIVTDAGVRVIITAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ +RI E + +IL+ V +D + L E + S
Sbjct: 148 PKELDRILEARDQMPGLETVILINPADQ-----------VGDHDGLTVLSLEQVRQAGVS 196
Query: 191 NDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAE 244
+ + + E +G DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA
Sbjct: 197 EEIQTVVE-ERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA- 254
Query: 245 NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVY 301
D LS LP H E + G + T V N K L +P +SVP +Y
Sbjct: 255 --DHSLSFLPLSHALEWGWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLY 310
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E + S AR V+ + +++ + + E + + ++PS
Sbjct: 311 EQVMS----------VAREKVSDSPVKLKIFEWSIRIGREWWQAEQEGRRPSVS------ 354
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQV 420
L AR H +A++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V
Sbjct: 355 LRAR---------HGVADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLFVCQ 405
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYGLTE+SP+++ P G+ G P+ +++ E E+L RG VM
Sbjct: 406 GYGLTEASPLVSFNSPGGYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVM 454
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GY+K P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+
Sbjct: 455 KGYWKAPEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGK 503
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
N+ P +E + ++ L V++G ++ ++ P +V A+RL I E+ +
Sbjct: 504 NISPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLR 563
Query: 601 EKTIS 605
+ ++
Sbjct: 564 SEELA 568
>gi|291448924|ref|ZP_06588314.1| long-chain-fatty-acid-CoA ligase [Streptomyces roseosporus NRRL
15998]
gi|291351871|gb|EFE78775.1| long-chain-fatty-acid-CoA ligase [Streptomyces roseosporus NRRL
15998]
Length = 607
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 253/556 (45%), Gaps = 77/556 (13%)
Query: 38 RIRISRRNH--RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGM 95
R+ + R++ ++R ++L A+GL GV+ ++++L S W + D +
Sbjct: 32 RVALGRKDAGGQWRDVTSGDFRDQVLALAKGLIAHGVRFGDRVALMSRTRYEWTLFDFAL 91
Query: 96 LATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG 155
GA +V SS+E++L + + +E VA+ VE+ + + + ++ LW
Sbjct: 92 WTVGAQSVPIYPTSSAEQVLWMLHDAEVVAVMVEHEDHAMTVGSVIDRLPHLK---RLW- 147
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
++ + DE++ G D ++H + T D +AT +YTSG
Sbjct: 148 -----------QLDAGAVDELLGAG-----VGIDDEVVQRHRRAVT--PDSVATVIYTSG 189
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYD----IVPAENGDKFLSML--PPWHVYERACGYFIFS 269
TTG PKG ++TH + + + ++ + ++ GD+ ++L P HV+ R
Sbjct: 190 TTGRPKGCVITHASFMFESDTMVGRWEPVFHSKPGDEAATLLFLPLAHVFGRMVEIAAIR 249
Query: 270 RGIELMYT---AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
++L + + L DL ++P ++++VP ++E +++G +++ T A
Sbjct: 250 GRVKLGHQPELSANALMPDLMSFRPTFILAVPYIFEKVFNGARRKAETEGRAGPFDKAVD 309
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
I + +A + + + PS A L H +K+VYKK+
Sbjct: 310 IAVKYAEAVELKAFG------DGPGPS---------------AGLRMQHQFFDKVVYKKV 348
Query: 387 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
+ A+G + +SGG + + LF+ GV V GYGLTES+ A P G+VG
Sbjct: 349 RDAMGGRVRHAMSGGSGMDRRLGLFFAGAGVTVFEGYGLTESTAAATANPPERTRYGTVG 408
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
PI T + I D G V V G V GY NP AT+ L +DGWL TGD+
Sbjct: 409 QPIPGTSVHIAD-----------DGEVWVHGPNVFSGYLGNPEATRAVL-QDGWLATGDL 456
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G S G L + GR K+ +V S G++V P LEE L+ Q +V+G
Sbjct: 457 G----------SLDADGYLTITGRKKEILVTSGGKSVSPAGLEERVRAHPLVAQCIVVGN 506
Query: 566 DQRRPGAIIVPDKEEV 581
D+ A++ D+E V
Sbjct: 507 DRPYIAALVTVDQESV 522
>gi|346992642|ref|ZP_08860714.1| AMP-binding enzyme [Ruegeria sp. TW15]
Length = 628
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 253/547 (46%), Gaps = 57/547 (10%)
Query: 67 LRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVAL 126
LR +G++ E +S+ S++ W D G+ G I + S+ +L ++ N S S L
Sbjct: 78 LRKLGLQRGEVVSILSEDRKEWAWFDMGIQCVGGIASGVYTTDSAAQLKYLINDSGSRFL 137
Query: 127 AVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKA 186
VE+ E ++ E + +I+L ++ ++ LGR++
Sbjct: 138 IVEDEEQLDKFLEVEEQLPDLLKVIIL----EDEGLHDLDHPRCMMIGDLYSLGRQAEAE 193
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 246
+ +A + D A +YTSGTTGNPKG ML+H+N++ I + +P+++
Sbjct: 194 EPGAFEA----EIAAASPQDTALLIYTSGTTGNPKGAMLSHENIMAAIEAGAHSLPSQST 249
Query: 247 DKFLSMLPPWHVYERACG--YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 304
D+ L LP H+ ER Y + + + + +LQ P +VP V+E +
Sbjct: 250 DEQLCFLPLCHILERDVSIYYPLAMKSTVNFAESPETVFANLQEVSPATFTAVPRVWEKI 309
Query: 305 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 364
YS + +F + A A ++ A TA + LT + PS VA+ W W
Sbjct: 310 YSQV---MFMAKEATPTGRFAFVQALKAGTA----RADYILT-GKPVPSP-VAMRFWFWD 360
Query: 365 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 422
R LV + ++ +G+ + G G+ P+ DL +Y AIGV + G+
Sbjct: 361 R---------------LVLRNLRRMLGLDRLRRGGSGAAPISPDLLRWYWAIGVPIVEGF 405
Query: 423 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 482
G+TE++ + A N +G++G P+ +++I D +G ++V+G + QG
Sbjct: 406 GMTETAGIAALNTLGVNKIGTIGMPVPGNDMRISD-----------EGEIQVKGLNIFQG 454
Query: 483 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 542
Y++N + T ++ DGWL TGD+G I G + + GR KD I+ + G+N+
Sbjct: 455 YWRNNAKTAESFTCDGWLRTGDMGHIDED----------GFVTITGRLKDIIITAGGKNI 504
Query: 543 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 602
P E+E S I V+IG ++ A+I+ D+E V A+ I ++ + L
Sbjct: 505 TPAEIESGLKFSQYISDAVIIGDRRKYLTALIMIDQENVEKFAQERKIPFSNFASLCAAS 564
Query: 603 TISLLYG 609
++ L G
Sbjct: 565 EVTELIG 571
>gi|415717506|ref|ZP_11466869.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 1500E]
gi|388060853|gb|EIK83528.1| long-chain-fatty-acid--CoA ligase [Gardnerella vaginalis 1500E]
Length = 603
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 248/546 (45%), Gaps = 89/546 (16%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
++ + + ++ A+G GV P + +S+ + S +W V D +++ GA+ V
Sbjct: 44 WKSYSAKEFRDMVVAVAKGFIARGVMPGDSISIIAHTSWQWTVLDMAIMSIGALTVPIYE 103
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRI--AETLCSKAAMRFIILLWGKKSSVAPDIV 165
SSS ++ HI S+ ++ VE+ + +I + CS ++I + ++
Sbjct: 104 TSSSIQIQHIVEDSKVCSIFVESADMLPKIEAVKDDCSTLHDVYVI----NRGAL----- 154
Query: 166 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 225
D I+ G+ D+ + + + D+AT VYTSG+TG PKG+ L
Sbjct: 155 --------DAFIEYGKT-------VTDSEFYERVHAVCGSDLATIVYTSGSTGEPKGIEL 199
Query: 226 THKNLLH----QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VR 280
TH N + S+ DI N + + LP HV+ R +F F+ + L T+ ++
Sbjct: 200 THSNFAFIAKSGVVSMPDIALKGN-PRLMLFLPLAHVFARFMQFFCFAGNVTLGLTSNLK 258
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ D Q ++P +++ VP ++E +Y +AA + R + FAY A
Sbjct: 259 TVLSDFQTFKPTFILGVPRIFEKIY----------NAASQKAGRGVKGFIFAYAA----- 303
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPL----HLLAEKLVYKKIQSAIGISKA- 395
+ +Q W +++ A++ P+ H L +KLVYK + G S +
Sbjct: 304 ------KVARQ---------WSYSQQSKAMVPPMLALSHALCKKLVYKPLLQVFGGSVSY 348
Query: 396 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 455
+SGG L M I F+ IG+ + GYG+TE+ + +G+VG P+ + I
Sbjct: 349 AISGGAPLDMSIAHFFNGIGLPLLEGYGMTETCAPSMVNPTSGYRIGTVGLPVKGVSVAI 408
Query: 456 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 515
D G + ++ V +GY NP T+Q + +GWL+TGD G
Sbjct: 409 AD-----------DGELCIKSPAVCKGYHNNPELTRQQI-VNGWLHTGDFG--------- 447
Query: 516 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
S G + + GR KD I+ + G+N+ P LE + + S ++ Q VVIG + A+I
Sbjct: 448 -SLDDDGFVRITGRKKDLIITAGGKNLSPNALEASLMSSPIVSQAVVIGDRKPFVAALIA 506
Query: 576 PDKEEV 581
D EV
Sbjct: 507 LDLAEV 512
>gi|343508946|ref|ZP_08746243.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
gi|342806012|gb|EGU41253.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
Length = 602
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 267/575 (46%), Gaps = 78/575 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLAT-GAINVVRGSRSSSEELLHIYNHS 121
A+GLRV ++K+ +FS+N +W VAD L T G I + + ++++ + N
Sbjct: 53 LAQGLRV-----QDKIGIFSNNMPQWTVADIATLQTRGVIVPIYPTSTAAQSAYILQNAD 107
Query: 122 ESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF--SYDEIIDL 179
V E P+F +A ++ + +I+ +++ DI + F S+ + I
Sbjct: 108 VKVLFVGEQPQF--DMAVSIFEQCEQLELIV------AMSDDIDLQGHSFASSWQDFIAR 159
Query: 180 GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 239
G E+ +A + + DD+ T +YTSGTTG PKGVML + N+ Q++
Sbjct: 160 GDEAHQA-------ELQQRLDDANLDDLLTLIYTSGTTGQPKGVMLDYANIGAQLQGHDQ 212
Query: 240 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVP 298
+ + D L LP HV+ERA +++ RG Y ++D L +P M +VP
Sbjct: 213 RLSLTDQDVSLCFLPLSHVFERAWTFYVLYRGATNCYLQDTMQVRDALSEIRPTVMSAVP 272
Query: 299 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 358
YE ++S I +++ + R+V+ F + C ++ ++PS +
Sbjct: 273 RFYEKIFSAIHEKVAKAPFIRKVL--------FTWAVNMGAKMAVC-HQDGRKPSLM--- 320
Query: 359 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVK 417
L + LA+KLV K+++ +G + GG L I F+ AIG+
Sbjct: 321 ------------LKKSYKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGIN 368
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
V++GYG+TE++ ++ C S+G + ++KI E NE+L VRG
Sbjct: 369 VKLGYGMTETTATVSCWDDKCFDPASIGMSMPGAQVKI--GENNEIL---------VRGP 417
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
VM+GY+K P T Q DE G+L TGD G I + G L + R K+ + S
Sbjct: 418 MVMRGYYKMPEETAQTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTS 467
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D E
Sbjct: 468 NGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVE 527
Query: 598 LSK--------EKTISLLYGELRKWTSKCSFQIGP 624
L K E ++ L EL K+ F++ P
Sbjct: 528 LIKHHQIVEMLESRVNDLQKELAKFEQVKKFKLLP 562
>gi|121604076|ref|YP_981405.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
gi|120593045|gb|ABM36484.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 616
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 156/581 (26%), Positives = 271/581 (46%), Gaps = 62/581 (10%)
Query: 60 ILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
I +++ L + + + ++++ N + DQ L+ G + V + + + +I +
Sbjct: 53 IAQWSQALAAMQLPRQARIAVLLPNGLDAVCIDQAALSRGLVPVPLHAIDNPGSIAYILS 112
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDL 179
++ L V + + I + A+R +++ P + + V + +
Sbjct: 113 DCDACVLMVPSLAQWRAIESVGLALPALRQVVV---TAREALPAGIGPVSVILLADWLAA 169
Query: 180 GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 239
G+ + A + D+++ VYTSGTTG PKGVMLTH+N++ + ++ +
Sbjct: 170 GQGTAHA------------AQPPAEDELSAIVYTSGTTGKPKGVMLTHRNVVSNVLAILE 217
Query: 240 IVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISV 297
V GD FLS LP H +ER GY++ + G + Y +V L +DL+ +P ++SV
Sbjct: 218 RVVPTAGDVFLSFLPLSHTFERTAGYYLPLAVGSCVAYARSVALLAEDLKTVRPTVLVSV 277
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI-YEGFCLTRNQKQPSYLV 356
P +YE +++ + + + S+ R+ + A + + + FC + Q P L
Sbjct: 278 PRIYERVFARLHESLAGSAFRTRL-----------FNAAQAVGWRRFC--KVQGLP--LA 322
Query: 357 ALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIG 415
A WA ++ +LWP ++LV +K+++ G + VSGG L + + +G
Sbjct: 323 AGEGSAWA-MLDPLLWPFL---DRLVARKLRAQFGGRVRVAVSGGAPLSHAVARCFLGLG 378
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
V + GYG+TE+SPV+AA N +VG + E++I D ++VR
Sbjct: 379 VPLLQGYGMTETSPVVAANGVDDNDPATVGRALPGIEVRIGDNRE-----------LQVR 427
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY+K T + L DGWL+TGD I GR R + GR K+ IV
Sbjct: 428 GPSVMKGYWKRAEDTARVLTPDGWLSTGDQADI----QDGRIR-------IMGRIKEIIV 476
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 595
STGE V P +LE A L Q++V+G+++ G + V +K E A L + A
Sbjct: 477 TSTGEKVPPGDLELAIAVDPLFAQVMVVGENRPFIGCVAVVNKAEWQRLAASLGLDPIAA 536
Query: 596 SELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTV 634
+ LS+ + T + P I + EP+T+
Sbjct: 537 ASLSQPAVRKAALARIAIQTRDFARYAAPRAIFLTLEPWTI 577
>gi|162456295|ref|YP_001618662.1| AMP-binding protein [Sorangium cellulosum So ce56]
gi|161166877|emb|CAN98182.1| AMP-binding enzyme family protein [Sorangium cellulosum So ce56]
Length = 1530
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 256/563 (45%), Gaps = 108/563 (19%)
Query: 30 NCVDAVATRIRISRRNHRFRVFCESKLE-QEILD----FAEGLRVIGVKPEEKLSLFSDN 84
+ +D VA R + RF S+ +E+ D A L +GV+ ++++L N
Sbjct: 596 DLLDEVAERFDHALSVQRFEQDGLSRTSYRELRDAACMTAARLAALGVRRGDRVALSGAN 655
Query: 85 SCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSK 144
W VA G+L GA VA+ ++ A+ L S
Sbjct: 656 QPAWPVAYFGILRAGA-----------------------VAVPIDPGLDAKAFADVLRSS 692
Query: 145 AAMRFIILLW--GKKSSVAPDIVEEIPV--------FSYDEIIDLGRESRKAFSDSNDAR 194
A ++LW G + D+ +P F+ ++ DLG S + D R
Sbjct: 693 TAK---VVLWDGGVAERLGADVRAALPNLHAFDMVGFAEGQVPDLGPASGDGLAPP-DVR 748
Query: 195 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 254
+GS D+A+ VYTSGTTG PKGV+LTH N + SL + P + D+ LS+LP
Sbjct: 749 -------VGSQDVASVVYTSGTTGEPKGVLLTHGNFTALLASLAPLFPLKASDRVLSVLP 801
Query: 255 PWHVYERACGYFI-FSRGIELMY---TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 310
+E CG + S+G ++Y + + D L++ + M+ VP +++ L
Sbjct: 802 LHQTFEVTCGLLLPLSQGARIIYLDEVSADRVSDGLKKARVTAMVGVPALWQML------ 855
Query: 311 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 370
R++VAR + A TAF S+ + L L R
Sbjct: 856 -------ERQIVARVKEQGPAAATAF----------------SWAMELNRMLGKR----- 887
Query: 371 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
L L A +L + + A+G + + +SGG +LP ++ +G+ + GYGLTE++P
Sbjct: 888 ---LGLNAGRLFFGSVHDALGGNVRFLISGGAALPRDTAAVFKGLGLPLAEGYGLTEAAP 944
Query: 430 VIAARRPT-CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 488
++ +P+ G+VG PI +IKI + + N V G V RG VM+GY +P
Sbjct: 945 LLTVTKPSPAASPGNVGKPIPGVKIKIANPDANGV------GEVLARGPNVMKGYADDPD 998
Query: 489 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 548
AT+ ALD DGWL TGD+G + +GR LVL GR + I + GE++ P ++E
Sbjct: 999 ATQAALDADGWLRTGDLGKL---DKQGR-------LVLVGRQSEVISAAKGESLYPADIE 1048
Query: 549 EAALRSSLIRQIVVIGQDQRRPG 571
+ ++++ ++G D R G
Sbjct: 1049 RMLGKIEHVKELAIVGIDNGRGG 1071
>gi|239917069|ref|YP_002956627.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
gi|281414469|ref|ZP_06246211.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
gi|239838276|gb|ACS30073.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
Length = 612
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 263/587 (44%), Gaps = 88/587 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL GV+P +++ LFS S W V DQ + GA++V SS+ ++ HI S
Sbjct: 66 AAGLIARGVQPGDRVGLFSPTSYAWAVLDQAVWFAGAVSVPIYETSSAHQVEHIVTDSGL 125
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
+AV + E R+AE ++ F + L +
Sbjct: 126 RVVAVGSEELDERVAEAAGHAGV--------------------DVATFPLTDA-GLAELA 164
Query: 184 RKAFSDSNDARKHYK-YETIGSDDIATYVYTSGTTGNPKGVMLTHK-------NLLHQIR 235
S+DA +H + T+ S A+ VYTSGTTG PKG ++TH N+LH R
Sbjct: 165 EAGAFVSDDAVEHARSLATLASP--ASIVYTSGTTGRPKGAVITHGNFVGAAINVLHFAR 222
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYM 294
+ P + L LP HV A I++ ++ + L DL + P ++
Sbjct: 223 EVVQWSPETTTSRTLLFLPLAHVLAHAVQVICLYARIQVAHSGSPATLLGDLASFHPTWL 282
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
++VP V+E + +GI+ + R A I ++ TA G + PS
Sbjct: 283 LAVPRVFEKVEAGIEAKAQKGGTGRIYAAAKRTAIEWS-TAVDEAEFG-----DGPGPS- 335
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEA 413
A+L L ++LVY+KI+ A+G + VSG +L + F+
Sbjct: 336 --------------ALLRARRALFDRLVYRKIREALGGEVISCVSGASALSPELVHFFRG 381
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
G+ + GYGLTE++ P + +G+VG P+ +KI AE E+L
Sbjct: 382 AGIPIVEGYGLTETTAPATVNIPGAHRVGTVGLPVAGVTVKI--AEDGEIL--------- 430
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
+RG V GY P A+ +A+ EDG+ TGDIG + H G L + GR KD
Sbjct: 431 IRGPVVFDGYHGMPKASAEAM-EDGFFRTGDIGALDEH----------GFLRITGRKKDV 479
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSIV 591
I+ + G+NV P +EEA + LI +VV+G+++ GA+I D E + A + LS+
Sbjct: 480 IITAGGKNVYPTPMEEALRQHRLIEHVVVVGENRPFVGALITLDAEALTQWALDRELSLT 539
Query: 592 HADASE-----LSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFT 633
A+A+ S ++ + + + + S F+I +D PFT
Sbjct: 540 PAEAATDPTVLASIQEAVDQVNAGVSRAESIRRFRI-----LDHPFT 581
>gi|114565123|ref|YP_752637.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
gi|114336416|gb|ABI73798.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
Length = 597
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 255/551 (46%), Gaps = 76/551 (13%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+ L G++ ++K+ + + NS +W AD G L + V S+ E+ + I N S++
Sbjct: 50 AQLLIEFGLQVQDKVVILAQNSPQWTCADIGALKARNVVVPVYPTSTIEQAVFIVNDSQA 109
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPD---IVEEIPVFSYDEIIDLG 180
+ N + ++ +A T+ ++A I+++ ++ D +++ ++ +I
Sbjct: 110 KLIFAGNQQQYD-MACTVAAQAECVQHIVVFDANVTLNADNHVYFDQVLAAQFNPLITNE 168
Query: 181 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 240
+R A S+ DD+ T +YTSGTTGNPKGVML ++N I+
Sbjct: 169 LNTRLANSNL--------------DDLFTLIYTSGTTGNPKGVMLDYRNFASMIKQHDSE 214
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPL 299
+P GD L+ LP HV+ER ++ RG +Y N +K+ L +PH + +VP
Sbjct: 215 LPFTAGDVSLAFLPLSHVFERGWSMYVLCRGGHNVYLNDTNRIKEALIAVKPHTLCAVPR 274
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
E +YS + ++ + R+ + +R+ KR +E +++ + S
Sbjct: 275 FLEKIYSAVHDKVGQAPKVRQTLFAWAMRVG------KRQFE---VSQGRASGSL----- 320
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 418
WL A+ W LA KLVY K+Q +G K GG +L +++ F+ +IGV V
Sbjct: 321 -WLSAQ------WK---LANKLVYSKLQQVLGGRLKFMPVGGAALDINVASFFHSIGVPV 370
Query: 419 QVGYGLTESSPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
GYG+TE+ + TCN L GS G P+ +IK+ + +E+L
Sbjct: 371 LCGYGMTETCATV-----TCNTLDNRVPGSNGKPLEAMQIKL--GKDDEIL--------- 414
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
VRG VM+GY+ P T A EDGWL TGD G I G L + R K+
Sbjct: 415 VRGDTVMRGYYNRPQDTADAF-EDGWLKTGDAGRIDEQ----------GNLYITDRIKEL 463
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 593
+ S G+ + P +E I Q+ ++ + A+IVP E + AK I
Sbjct: 464 MKTSNGKYIAPQRVEGKVACCPFIEQVAIVADARNYVSALIVPAFEALNTWAKAQGIHVE 523
Query: 594 DASELSKEKTI 604
+ EL + +
Sbjct: 524 NPIELLRHSQV 534
>gi|154509322|ref|ZP_02044964.1| hypothetical protein ACTODO_01847 [Actinomyces odontolyticus ATCC
17982]
gi|153798956|gb|EDN81376.1| AMP-binding enzyme [Actinomyces odontolyticus ATCC 17982]
Length = 627
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 243/558 (43%), Gaps = 89/558 (15%)
Query: 36 ATRIRISRR---NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
ATR I R+ +R E+ A GL G++P +++++ S W + D
Sbjct: 53 ATRPLILRKIGIGDTWRSITARDFYDEVQSVAAGLIARGLEPGDRVAIMSRTRYEWTLLD 112
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
A G + V SS +++ H+ N ++ + I ET+ +R
Sbjct: 113 FACWAAGLVPVPIYETSSIDQVAHVLNDADVTLI----------ITETVSMAEIVR---- 158
Query: 153 LWGKKSSVAPDIVEEIPVFSYDE------IIDLGRESRKAFSDSNDARKHYKYETIGSDD 206
++ A + + V S D I D R + DA + DD
Sbjct: 159 -----AAAARENRDNTHVLSLDSEAIETLIADGAATPRDRVAARADA--------LTKDD 205
Query: 207 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERAC 263
IAT VYTSGTTG PKG +L+H+N + + + +P A + L LP HV+ R
Sbjct: 206 IATIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGKDSRLLLFLPLAHVFARFL 265
Query: 264 GYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 322
F I G+ + ++NL +DL ++P Y++ VP V E +Y+ + +S +R +
Sbjct: 266 QVFQISGNGVLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK---ASGPKRKI 322
Query: 323 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 382
R +++ AY+ EG PS A L H LA++LV
Sbjct: 323 FRWAAKVAIAYSRALDTDEG---------PS---------------ASLKAQHALADRLV 358
Query: 383 YKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 441
Y++I + G + VSGG L + FY +G+ V GYGLTE+ ++ P + +
Sbjct: 359 YQQIIRLVGGNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVSVNTPRLSKI 418
Query: 442 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 501
G+VG + KI D +G + ++G V Q Y +P AT EDGW
Sbjct: 419 GTVGPALPPMSFKISD-----------QGEILLKGPSVFQRYHNDPGATAACFTEDGWFR 467
Query: 502 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 561
TGD+G S G + + GRAK+ IV + G+NV P LE LI Q++
Sbjct: 468 TGDLG----------SLDRDGYVSITGRAKEIIVTAGGKNVAPAALENPMRSHPLISQVL 517
Query: 562 VIGQDQRRPGAIIVPDKE 579
V+G + A+I D E
Sbjct: 518 VVGDQRPFVAALITLDAE 535
>gi|326336308|ref|ZP_08202479.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691482|gb|EGD33450.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 596
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 151/588 (25%), Positives = 269/588 (45%), Gaps = 68/588 (11%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
Q + A L V +E + +F+ NS W + D A V + +++++
Sbjct: 41 FNQRVQQIAYALLHHQVDIQENIGIFAPNSPEWTMVDMAAAHLRACAVPIYATNTADQAS 100
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGK-KSSVAP--DIVEEIPVFS 172
+I N + L + E + +I + + I++ G + P + + +
Sbjct: 101 YIINDANIRILFIGEKEQYEKIQQIKEKCPQLELIVVFNGALVKGILPFVNTLSQFTTIP 160
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
EI E +K FS N DI T +YTSGTTG PKGV++ ++N+ +
Sbjct: 161 NQEI--YTEELKKRFSQRN------------LQDIYTIIYTSGTTGKPKGVLIDYENVAY 206
Query: 233 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQP 291
Q+ + + + + G+ +S LP HVYER ++ +G+ Y N + + L+ +P
Sbjct: 207 QLINHDERLTVKEGNVSMSFLPLSHVYERLWLAYVLHKGVINCYLDDTNRVAEALKEVKP 266
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
HYM VP + E +Y+ I + + S +R++ SFA TR K
Sbjct: 267 HYMCVVPRLLEKIYTKIYENVGKQSLIKRMI------FSFA-------------TRTAK- 306
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLF 410
+ L + + IL L+ ++KLV++K++ A+G + + GG+ L I F
Sbjct: 307 ----IHLKQKRKGKRVSFILQELYNFSDKLVFRKLKEALGGNIQMIPCGGALLEPSIGRF 362
Query: 411 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
+ AIGV V +GYG+TE++ +A L SVG + + E+KI E NE+L
Sbjct: 363 FRAIGVNVTLGYGMTETTATVACWDIKFK-LKSVGTVLPNIEVKI--GENNEIL------ 413
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
++G + +GY+ NP +A DG+ TGD G++ G L + R
Sbjct: 414 ---LKGGSITKGYYNNPEENVKAFTSDGYFRTGDAGYLDKE----------GNLFITERI 460
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 590
K+ + S G+ + P ++E + S I QI +I ++ A+IVP+ + ++ AK L++
Sbjct: 461 KELMKTSNGKYIAPQQIEGKVGKDSFIEQIAIIADARKYVSALIVPNYDALVEYAKSLNL 520
Query: 591 VHADASELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 635
+ + S+L K + + L+ + QI ++ PF++N
Sbjct: 521 KYKNYSDLIKNSQIVDFFQKRLQNLQQGLAAYEQIKKFTLLTTPFSIN 568
>gi|399991476|ref|YP_006571716.1| long-chain-fatty-acid-CoA ligase [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398656031|gb|AFO89997.1| putative long-chain-fatty-acid-CoA ligase [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 645
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 260/567 (45%), Gaps = 70/567 (12%)
Query: 58 QEILDFAE----GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
Q+ D AE GL +G++ E +S+ S++ WL D G+ GAI + S+++
Sbjct: 83 QDYWDHAEKIGLGLMALGLERGEVVSILSEDRKEWLYLDMGIQGAGAIASGVYTTDSAQQ 142
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L ++ N S S L VEN E ++ E +R++I+L D+ E +F
Sbjct: 143 LAYLVNDSGSRFLVVENDEQLDKFLEIEAEVPHLRWVIIL---DRDGLHDLRHEKCLF-L 198
Query: 174 DEIIDLGRESR----KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 229
D++ D G + AF D+ + DD A +YTSGTTG PKG ML+H+N
Sbjct: 199 DQLYDQGAAYKIANPTAFEDAVGRSR--------PDDTALLIYTSGTTGLPKGAMLSHEN 250
Query: 230 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQ 287
+L + S + D+ L LP H+ ER Y + G + + + + D++Q
Sbjct: 251 ILATMESGARSLECYATDEQLCFLPLCHILERNVSVYLPMAAGSTVNFAESPETVFDNIQ 310
Query: 288 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 347
P +VP V+E +YS RV+ A AF R
Sbjct: 311 EVSPATFFAVPRVWEKVYS-------------RVLVLAQEATWLGRWAFNRAVAAGAARA 357
Query: 348 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHI 407
N Y++A A+ + + + + + + LV + ++ +G+ + G G+ P+
Sbjct: 358 N-----YVLA------AKPVPSGIALRYRIWDLLVLRNLRRMLGLDRLRRGGTGAAPISP 406
Query: 408 DL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 465
+L +Y +IGV + GYG+TE++ + AA R + G+VG + EI+I
Sbjct: 407 ELLRWYWSIGVPLIEGYGMTENAGLTAANRVLSHRPGTVGQAVPGVEIRI---------- 456
Query: 466 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 525
G +++ G QGY+ P T + EDGWL TGD+G + G L
Sbjct: 457 -APDGEIQLWGLNNFQGYWNKPEKTAETYTEDGWLRTGDVGQLDD----------AGFLT 505
Query: 526 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 585
+ GR KD I+ + G+N+ P E+E S I VVIG ++ +I+ D+E V A
Sbjct: 506 ITGRIKDIIITAGGKNITPAEIESRLKFSHYISDAVVIGDRRKFLTCLIMIDQENVEKFA 565
Query: 586 KRLSIVHAD-ASELSKEKTISLLYGEL 611
+ I +D AS + E+ + L+ GE+
Sbjct: 566 QDRKIPFSDFASLCAAEQVVDLIRGEV 592
>gi|288923076|ref|ZP_06417227.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
gi|288345564|gb|EFC79942.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
Length = 604
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 234/521 (44%), Gaps = 74/521 (14%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A GL G++P ++ ++ S W V D + A G I V SS+ ++ I + S +
Sbjct: 59 AAGLVARGLQPGDRFAIMSRTRYEWTVLDYAVWAAGGITVPIYETSSAAQIEWIMSDSGT 118
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES 183
V VE+ E+ +AE A+R +++L A D + E + +G E
Sbjct: 119 VLAVVESDEYAALVAEVRDRLPALREVLVL----DQGALDTLGEAGAGT-----GVGAEE 169
Query: 184 RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP- 242
A + +D IAT +YTSGTTG PKG L+H+ LL + + +P
Sbjct: 170 LAA-----------TRSDVTADSIATVIYTSGTTGRPKGCELSHRALLFNALASAEAMPN 218
Query: 243 --AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPL 299
E+ + LP HV R I + + YT N L DL + QP ++++VP
Sbjct: 219 HFTEDASTLM-FLPLAHVLARTMQCTIINNARCIAYTPDTNTLLADLAKVQPTFILAVPR 277
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
V+E +Y+G + + R + A + + +Q P + L
Sbjct: 278 VFEKVYAGARAKAHADGKGR------------IFDAAEATAVAYSRALDQGGPGLALRL- 324
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 418
H L +LVY K++SA+G + G+SGG L +H+ F+ IG +
Sbjct: 325 --------------RHALFNRLVYGKLRSALGGNITHGISGGAPLNVHLCHFFRGIGFLI 370
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYGLTES+ RP +G+VG P+ ++I D G V +RG
Sbjct: 371 LEGYGLTESTAAATVNRPESLKIGTVGLPLPGVTVRIAD-----------DGEVLLRGDL 419
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V+ GY N +A K+ALD DG+L TGD+G S G L + GR K+ +V +
Sbjct: 420 VLSGYRNNETAGKEALDSDGFLRTGDLG----------SLDETGHLRITGRKKEILVTAG 469
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G+NV P LE+ + L+ Q +++G + A+I D E
Sbjct: 470 GKNVAPAPLEQRIGQHPLVGQAMLVGDQRPFIAALITLDPE 510
>gi|354498835|ref|XP_003511518.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 [Cricetulus griseus]
Length = 698
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 247/548 (45%), Gaps = 80/548 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V ++ + +I N +E + + P+
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVVVPLYDTLGTDAITYIVNKAELPVIFADKPDK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+++ S D+VE+ + + S ++ DLG+ +RK
Sbjct: 206 AKLLLEGVENKLTPCLKIIVIM----DSYGSDLVEQGKKCGVEIISLKDLEDLGKVNRK- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ +
Sbjct: 261 -----------KPQPPAPEDLAIICFTSGTTGNPKGAMITHQNIISDCSAFVKTTENSFN 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
A D +S LP H++E + G ++ + +R L DDL+ QP VP +
Sbjct: 310 ASPDDILISFLPLAHMFETIVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A TA KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTAVKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVK 417
LW +KL++ KIQS++G K + G+ P+ + A+G +
Sbjct: 410 SLW---------------DKLIFHKIQSSLG-GKVRLMITGAAPVSATVLTFLRTALGCQ 453
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + P G VG P+ +K+VD E + A +G V V+G+
Sbjct: 454 FYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYVKLVDVEEMNYMAAKGEGEVCVKGA 513
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V +GY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 514 NVFKGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 563
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GE + P ++E LRS + Q+ V G+ Q A++VPD E + A + H
Sbjct: 564 QGEYIAPEKIENIYLRSEALAQVFVHGESLQAFLIAVVVPDAENLGSWASKRGF-HGTFE 622
Query: 597 ELSKEKTI 604
EL + K +
Sbjct: 623 ELCRNKDV 630
>gi|417932159|ref|ZP_12575508.1| AMP-binding enzyme [Propionibacterium acnes SK182B-JCVI]
gi|340774769|gb|EGR97244.1| AMP-binding enzyme [Propionibacterium acnes SK182B-JCVI]
Length = 644
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/540 (25%), Positives = 249/540 (46%), Gaps = 64/540 (11%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G++ +++SLFS N W+ AD + G + V S+ ++++HI + +
Sbjct: 88 GLQRGDRISLFSGNCPEWIEADLAGMTIGVVPVPIYPTSTPDQIVHIVTDAGVRVIVAAG 147
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDS 190
P+ RI E + +ILL D +++ ++ L + + S+
Sbjct: 148 PKELGRILEARDQMPGLEAVILL---------DPADQVGDQDGLTVLSLDQVRQAGVSEE 198
Query: 191 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGD 247
+ +DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D
Sbjct: 199 MQGVVEERMGQSCADDVAALIYTSGTTGQPKGVMISHRAALAELQALDAFFDVTPA---D 255
Query: 248 KFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 306
LS LP H E + G + + + L +P +SVP +YE +
Sbjct: 256 HSLSFLPLSHALEWGWSMVVIRHGCLNTFVPNPKTISTMLAEVRPTLFVSVPKLYEQVMK 315
Query: 307 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 366
++++ S A + +F ++ + E + + ++PS
Sbjct: 316 VAREKVSDSPAKLK---------AFEWS-MQVGREWWQAQQEGRRPS------------- 352
Query: 367 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLT 425
A L H +A++LV K I+ A+G K ++ GG+ L ++ F+ A G+ V GYGLT
Sbjct: 353 --ASLRARHGIADRLVLKAIRDAVGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLT 410
Query: 426 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
E+SP+++ P G+ G P+ +EI + +G + R +M+GY+K
Sbjct: 411 EASPLVSFNSPGEYKFGTAGKPLVGSEITTTE-----------EGEILYRSLNIMKGYWK 459
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
P AT A+ EDGWL+TGDIG I G LV+ R KD IV G+N+ P
Sbjct: 460 APEATAAAI-EDGWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQ 508
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 605
+E++ ++ L V++G ++ ++ P +V A++L I E+ + + ++
Sbjct: 509 PIEDSLMKDPLFEHAVLLGDNRPCLTLLVKPSLPQVEEMAEKLHITSMTVPEMLRSEELA 568
>gi|365540244|ref|ZP_09365419.1| Long-chain-fatty-acid--CoA ligase [Vibrio ordalii ATCC 33509]
Length = 602
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 157/602 (26%), Positives = 269/602 (44%), Gaps = 70/602 (11%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
+ +A + +I + H R + Q I + L +K ++K+ +FS+N W +AD
Sbjct: 21 ECIALKHKIEKEWHGIRW---KQFGQRIDAMSLALLAQAIKIQDKVGIFSNNMPHWTIAD 77
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
+L A+ V ++ + +I ++ L V ++ + ++ I+
Sbjct: 78 LAVLQVRAVTVPIYPTNTPAQASYIIQDADVKVLLVGEQAQYDAALDFFDECEQLKLIVA 137
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
+ S D+ + I+ + ++A +S + E DD+ T +Y
Sbjct: 138 M-----SDGIDLKSFQHGIHWHTFIEQNTDGQQAELES-------RLEQANIDDLLTLIY 185
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGI 272
TSGTTG PKGVML ++N+ Q+ + + + D L LP HV+ERA ++I G
Sbjct: 186 TSGTTGQPKGVMLDYRNIGAQLEGHDERLNITSDDVSLCFLPLSHVFERAWTFYILYCGA 245
Query: 273 ELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF 331
Y ++D L +P M +VP YE ++S I +++ + R+V+ F
Sbjct: 246 TNCYLQDTMQVRDALSDLKPTVMCAVPRFYEKIFSAIHEKVSKAPLHRKVL--------F 297
Query: 332 AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 391
+ C + +QPS++ L + LA+K+V K+++ +G
Sbjct: 298 TWAVNMGAKMALC-HQETRQPSFM---------------LKKSYALADKIVLSKLRALLG 341
Query: 392 ISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 450
+ GG L I F+ AIG+ V++GYG+TE++ ++ C S+G +
Sbjct: 342 GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPDSIGMSMPG 401
Query: 451 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 510
++KI D NE+L VRG VM+GY+K T A DE G+L TGD G I
Sbjct: 402 AQVKIGD--NNEIL---------VRGPMVMRGYYKMAEETALAFDEQGFLKTGDAGHIDE 450
Query: 511 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 570
G + + R K+ + S G+ + P +E A + I QI VI ++
Sbjct: 451 Q----------GNVFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFV 500
Query: 571 GAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQI 622
A+IVP + + + AK L+I + D EL K EK ++ L EL K+ F++
Sbjct: 501 SALIVPCYDSLEVYAKELNIKYHDRLELIKNNQVVEMLEKRVNDLQKELAKFEQVKKFKL 560
Query: 623 GP 624
P
Sbjct: 561 LP 562
>gi|365121016|ref|ZP_09338186.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
gi|363646486|gb|EHL85732.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
Length = 603
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 249/570 (43%), Gaps = 74/570 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
++ +++ A +GV+ +E ++ ++ N L+ D A+ V + SS +
Sbjct: 39 TQFSEQVELIALAFLTMGVREQENIATYTQNRPEGLIIDFAAYENRAVVVPLYATSSQSQ 98
Query: 114 LLHIYNHSESVALAVENP-EFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+ +I N +E L V ++ N A + + IIL P + +
Sbjct: 99 IEYIINEAEVRFLFVGGQFQYDNAYAARKNCTSLEKLIIL--------DPSVK-----LA 145
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYE----TIGSDDIATYVYTSGTTGNPKGVMLTHK 228
D+ I + E D HY E + +D+ + +YTSGTTG PKGVMLT+
Sbjct: 146 EDDTISIRFEDLYKIGKQADNVLHYTLEQRMLSASDEDLVSIIYTSGTTGEPKGVMLTNS 205
Query: 229 NLLHQIR-SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD-- 285
N +R + + D L LP H++ERA YF +GI + V N K D
Sbjct: 206 NFNEAMRIHIQRLKMVSEKDISLCFLPLTHIFERAWTYFCLVKGIRV----VINQKPDEI 261
Query: 286 ---LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 342
++ +P M SVP +E +Y+ +Q++I TS +R++ + T KR
Sbjct: 262 QSIIKEVRPTIMCSVPRFWEKVYTAVQEKISTSKGIQRIMMMKAVE-----TGRKR---N 313
Query: 343 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGG 400
R +K+ + + LW +KLV KI+ AIG+ + + G
Sbjct: 314 IDFLRLEKKVPFFLECRYRLW---------------DKLVLSKIRKAIGVENGNIFPTAG 358
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L I+ F + G+ + GYGL+E++ + + G+VG + ++K+ E
Sbjct: 359 APLSDTINEFLHSCGINIIYGYGLSETTATVTCFEISGYEFGTVGTTLPGIQVKM--GED 416
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
NE+L V+G VM+GY+K P T + +DGW TGD G +
Sbjct: 417 NEIL---------VKGGTVMKGYYKKPEETAKVFTKDGWFKTGDAGKLNAE--------- 458
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 580
G LVL R KD STG+ + P +E I Q+ VIG ++ AII+P E
Sbjct: 459 -GSLVLTERIKDLFKTSTGKYIAPQAIETKLGEDKYIDQVAVIGDQRKYVTAIIIPAYEA 517
Query: 581 VLMAAKRLSIVHADASELSKEKTISLLYGE 610
+ A + I + + EL K ++I L E
Sbjct: 518 LKEYAAQKQIQYRNLEELVKNQSIQKLIQE 547
>gi|82702546|ref|YP_412112.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82410611|gb|ABB74720.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 645
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 157/583 (26%), Positives = 268/583 (45%), Gaps = 55/583 (9%)
Query: 24 FRVFTRNCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
F + + A+A R + + +R + ++ + + L ++ +++++
Sbjct: 51 FSIRIKRTPQAIAYR-QFDVESGEWREYNWQEMGTRVRRWKRALMRENLEAGDRVAILLR 109
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
NS W+ DQ LA G + V + + + +I S S L V + + +A + C
Sbjct: 110 NSIEWVCFDQAALAVGLVVVPLYPSDAPDNIAYILEDSGSRLLLVGTQKRWETLA-SRCK 168
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 203
A + I+ + V + V + + D G + +S D +
Sbjct: 169 DAGLGKILCVEHPSGDGGEGRVLQ-GVGEWLKAADEGASDEEERGNSGDKGNSQPSD--- 224
Query: 204 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 263
S +AT VYTSGTTG PKGVML+H N+L + + D +LS+LP H+ ER
Sbjct: 225 SHALATLVYTSGTTGKPKGVMLSHFNVLWNAEATLQAISGYPEDVYLSLLPLSHMLERTA 284
Query: 264 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 321
Y++ G + Y ++++L +DL+ +P ++VP V Y GI+ ++ R
Sbjct: 285 SYYVPLMAGSSVAYARSLKDLPEDLKSVRPGIFVAVPQV----YVGIRNKMNQQVQERGW 340
Query: 322 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 381
VAR L+ + A +KR F + + Q + LW R+ WP + +L
Sbjct: 341 VARLLLDWTVAL-GWKR----FTVVQAQGKER--------LWQRVA----WP---ILRQL 380
Query: 382 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 440
V K+ +A G + VSGGG L + ++ +G+ + GYGLTE+SP++ A R N+
Sbjct: 381 VAAKVLAAFGGRLRLAVSGGGPLHADVSRYFIGLGLPLLQGYGLTEASPILTANRLQDNM 440
Query: 441 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 500
GS G + E++I E E+L R VM GY+ P T+ A+D +GWL
Sbjct: 441 PGSTGSALLGVELRI--GEQRELL---------ARSPGVMLGYWNRPEETRAAIDAEGWL 489
Query: 501 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 560
+TGD I+ +H + + GR K+ +V S+GE V +LE + ++ L Q+
Sbjct: 490 HTGDQARISDNH-----------VFISGRIKEILVTSSGEKVPSGDLEMSIVQEPLFDQV 538
Query: 561 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 603
+V+G+ + A+ V +K E A L + + LS T
Sbjct: 539 MVVGEGRPYLTALAVVNKREWRNLASSLGLKTDEVQSLSHSAT 581
>gi|294629291|ref|ZP_06707851.1| long-chain-fatty-acid-CoA ligase [Streptomyces sp. e14]
gi|292832624|gb|EFF90973.1| long-chain-fatty-acid-CoA ligase [Streptomyces sp. e14]
Length = 640
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 251/584 (42%), Gaps = 72/584 (12%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
+ + A GL +GV PEE+++L + W++AD G++ GA +++++E I
Sbjct: 73 ERVYAIAAGLIELGVHPEERVALAASTRVEWVLADLGIMCAGAATTTIYPQTNADESAFI 132
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
SES L EN + E + ++ +++ V S D ++
Sbjct: 133 LADSESKVLIAENAGQLAKALEKRAELPDLHHVV------------VIDPAGVESGDWVL 180
Query: 178 DLGR--ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
L E A+ + + + I D +AT +YTSGTTG PKGV L H N + +
Sbjct: 181 TLAELEERGAAYLEKHPELIKERVGAITKDQLATLIYTSGTTGRPKGVRLPHDNWSYMAK 240
Query: 236 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKD----DLQRYQ 290
++ D LP HV+ G + S IEL + TAV D +L Q
Sbjct: 241 AIAATGLLGPEDVQYLWLPLAHVF----GKVLTSGQIELGHITAVDGRVDKIIENLPVVQ 296
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 350
P YM +VP ++E +Y+G+ + A+ + + ++ Y K + F T
Sbjct: 297 PTYMAAVPRIFEKVYNGVAAKARAGGNAKYKIFQWAAEVAREYA--KVTQDNFQRTGVHS 354
Query: 351 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 409
P L A H +A+ LVY KI+ A G +A VSG +L I
Sbjct: 355 APFGLAAK----------------HKVADALVYSKIREAFGGRLRACVSGSAALAPEIGY 398
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
F+ G+ V GYGLTESS G+VG P+ TE++I D
Sbjct: 399 FFAGAGIHVLEGYGLTESSAASFVNPGEAYRTGTVGKPLPGTEVRIAD-----------D 447
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G + +RG +MQGY K P T + L+ DGW +TGDIG ++P G L + R
Sbjct: 448 GEILLRGPGIMQGYHKLPEKTDEVLESDGWFHTGDIGELSPD----------GYLRITDR 497
Query: 530 AKDTIVLSTGENVEPLELE-EAALRSSLIRQIVVIGQDQRRPGAIIVPD--------KEE 580
KD I S G+ + P E+E + + I+V G D+ A+I D KE
Sbjct: 498 KKDLIKTSGGKYIAPAEVEGQFKAVCPYVSNILVHGADRNFCTALIALDELAIEEWAKEN 557
Query: 581 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP 624
L IV A + E + L L++W + F++ P
Sbjct: 558 GLEGKPYAEIVAAPQTVEMVEGYVKQLNEGLQRWQTIKKFRLLP 601
>gi|359419517|ref|ZP_09211468.1| long-chain fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
gi|358244478|dbj|GAB09537.1| long-chain fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
Length = 594
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 253/572 (44%), Gaps = 96/572 (16%)
Query: 28 TRNCVDAVATRIRISRRNHR-FRVFCES--------KLEQEILDFAEGLRVIGVKPEEKL 78
++ CVD V R R R FR + + E+ A+GL GV+P +++
Sbjct: 15 SKTCVDTV-LRYRAERPTMPLFRRYANGAWVNVTAGQFADEVDAVAKGLIASGVQPGDRV 73
Query: 79 SLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIA 138
+L S W V D + GA V SS +++
Sbjct: 74 ALLSSTRFEWTVIDYAIWRAGATTVAIFDTSSPDQV------------------------ 109
Query: 139 ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR--ESRKAFSDSNDARKH 196
+ + S + +IL +S D+++ +ID G E K D +DA
Sbjct: 110 DWILSDSGTSLVILESQAHASAHADVIKGCKDVRETLVIDDGAIAELTKRGKDVSDADLD 169
Query: 197 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLP 254
+ + D AT +YTSGTTG PKGV+LTH N + + ++ D + G L LP
Sbjct: 170 ARNAKASAADAATLIYTSGTTGRPKGVVLTHANFMAEAAAVTDSLGTMMREGKSTLLFLP 229
Query: 255 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
HV+ R + + +T+ + +L D L + P +++SVP V+E +Y+ +++
Sbjct: 230 LAHVFARVIAVTALENRVIVGHTSDLTSLVDLLAAFSPDFVLSVPRVFEKVYNSAEQKAI 289
Query: 314 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 373
+ + +A A TA I+W A+
Sbjct: 290 DGGKGK-IFGKA------AETA-----------------------IEWSKAQDTGGAGLG 319
Query: 374 L---HLLAEKLVYKKIQSAIGI-SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 429
L H + +KLVY K+++A+G +A VSGGG L + F+ GV + GYGLTE++
Sbjct: 320 LKLKHAVFDKLVYSKLRAALGGRCEAAVSGGGPLGARLGHFFRGAGVPIFEGYGLTETTA 379
Query: 430 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 489
+ RP +GSVG P+ + I AE EVL ++G V GY+KN A
Sbjct: 380 AVTVNRPDAQQVGSVGRPVAGMSVAI--AEDGEVL---------LKGPVVFGGYWKNEKA 428
Query: 490 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 549
T +A+ DGW +TGD+G + G L + GR K+ +V + G+NV P +LE+
Sbjct: 429 TAEAI-VDGWFHTGDLGSLND-----------GFLSITGRKKEILVTAGGKNVSPAQLED 476
Query: 550 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 581
++L+ Q +V+G + GA+I D E V
Sbjct: 477 TIRANALVSQCLVVGDGKPFIGALITLDPEAV 508
>gi|402870957|ref|XP_003899459.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 2 [Papio
anubis]
Length = 698
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 241/530 (45%), Gaps = 77/530 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAVTYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K +++ I+L+ + ++VE + + S + DLGR +R+
Sbjct: 206 AELLLEGVENKLTPSLKIIVLM----DAYGSELVERGQKCGVEIISLKAMEDLGRVNRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG ++TH+N++ +++ ++P
Sbjct: 261 -----------KPKPPAPEDLAVVCFTSGTTGNPKGALITHRNIVSDCSAFVKATEKVLP 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ + G ++ + +R L DDL+ QP VP +
Sbjct: 310 LNASDTHISFLPLAHMYEQLMKCVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLSMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKR 587
GE + P ++E +RS I Q+ V G+ Q AI+VPD E + A++
Sbjct: 565 GEYIAPEKIENIYIRSEAIAQVFVHGESLQAFLIAIVVPDVETLRPWAQK 614
>gi|456982309|gb|EMG18962.1| AMP-binding enzyme, partial [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 418
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 201/404 (49%), Gaps = 20/404 (4%)
Query: 33 DAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVAD 92
D+ A + +N++ F L + + GL +G++P + L +D+ RWL
Sbjct: 27 DSTAQYYKPDGKNYQANSF--KNLYETVQQIGCGLISLGIEPGTPIGLIADSGARWLWCS 84
Query: 93 QGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIIL 152
G+ G +V RG+ S+S++L +I NH+E +EN ++ ++ IIL
Sbjct: 85 MGITNIGCADVPRGTDSTSDDLRYILNHAECSITFLENETALKKVLSQKSEFPHLKKIIL 144
Query: 153 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
K + +E+ F + DL + + + H + I +D+AT VY
Sbjct: 145 FDQKGT------LEDTKSFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVY 198
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFI 267
TSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 199 TSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVC 255
Query: 268 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 327
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 256 IRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFK 315
Query: 328 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 387
I+ Y +K + L + + S +L L + I +LW + +++ L + KI+
Sbjct: 316 EIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIK 372
Query: 388 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 430
+G K +SG G+LP +ID F+ AIG+ + GYG+TE S +
Sbjct: 373 QGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGI 416
>gi|197098952|ref|NP_001125625.1| long-chain-fatty-acid--CoA ligase 1 [Pongo abelii]
gi|55728677|emb|CAH91078.1| hypothetical protein [Pongo abelii]
Length = 698
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/547 (27%), Positives = 245/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVVVPLYDTLGNEAITYIVNKAELSLVFVDKPE- 204
Query: 134 FNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY-DEIIDLGRE------SRKA 186
+ I+LL G ++ + P + + + +Y E++ G++ S KA
Sbjct: 205 --------------KAILLLEGVENKLIPGLKIIVLMDAYGSELVGRGQKCGGEVTSMKA 250
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
D A + K + +D+A +TSGTTGNPKG M+TH+N++ +++ + V
Sbjct: 251 MEDLGRANRR-KPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATENTVN 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 310 PCPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRGGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E +PA +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMPAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++ E
Sbjct: 565 GEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWARKRGF-EGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|218778792|ref|YP_002430110.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218760176|gb|ACL02642.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 637
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/521 (27%), Positives = 246/521 (47%), Gaps = 58/521 (11%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
GL IGV+ ++++L + W+ AD +L GA+ V S +EL +I S +
Sbjct: 60 GLIEIGVEKGDRVALMAHTCPEWMQADYSILCAGAMTVCVYPTLSKDELTYIIRDSGAKV 119
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESR- 184
L V++ + E ++ +I+L G+ P I++ ++ + LG R
Sbjct: 120 LYVQDGLNLAKALEAWADMPSLEKVIVLQGEVGGDDPRILD------FNALCFLGSNLRA 173
Query: 185 ---KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
KAFS+ +++++ DD T VYTSGTTG PKG + TH ++ R D+
Sbjct: 174 KEPKAFSN--------RWKSVDLDDPMTIVYTSGTTGKPKGAVHTHASINAACRR--DME 223
Query: 242 P---AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISV 297
P + D LS LP H YER CG+ + G I L Y++ + + +DLQ ++P +SV
Sbjct: 224 PIGLMKPDDVLLSFLPLSHTYERECGHGVAMHGAITLAYSSPKTMVEDLQVFKPTMFMSV 283
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P +YE ++ + + S ++ + +++ A + GF + + + L +
Sbjct: 284 PRIYERIFMALSAAA-SESFLKKAIFNYALKVGKKVVAARSDENGFV---DMSEEADLTS 339
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 416
I +L + L +K+++ K++ +G + S G+LP + + A+G+
Sbjct: 340 GIG--------PLLRMQYQLVDKILFSKVREKLGGRFRFAFSAAGALPADLCKVFMAMGI 391
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
++ GYG TE+ + RP + GSVG E +I A E L V+G
Sbjct: 392 RIYEGYGATETCNTVNLNRPNKVLPGSVGCLAPGVEGRI--APDGEWL---------VKG 440
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
M Y+ NP ATK+A EDG+ +TGDI + G L + R K +VL
Sbjct: 441 PNNMLEYWNNPEATKEAFTEDGFYHTGDI----------VEEQADGYLKIVDRKKGLMVL 490
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 577
TG+NV ++E S I +V +G +++ AI++PD
Sbjct: 491 DTGKNVPSAKIESCFSLSRYIDTVVPVGDNRKFVAAIVIPD 531
>gi|400753120|ref|YP_006561488.1| long-chain-fatty-acid-CoA ligase [Phaeobacter gallaeciensis 2.10]
gi|398652273|gb|AFO86243.1| putative long-chain-fatty-acid-CoA ligase [Phaeobacter
gallaeciensis 2.10]
Length = 645
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 258/563 (45%), Gaps = 62/563 (11%)
Query: 58 QEILDFAE----GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
Q+ D AE GL +G++ E +S+ S++ WL D G+ GAI + S+++
Sbjct: 83 QDYWDHAEKIGLGLMALGLERGEVVSILSEDRKEWLYLDMGIQGAGAIASGVYTTDSAQQ 142
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
L ++ N S S L VEN E ++ E +R++I+L D+ E +F
Sbjct: 143 LAYLVNDSGSRFLVVENDEQLDKFLEIEAEVPHLRWVIIL---DRDGLHDLRHEKCLF-L 198
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
D++ D G AF +N DD A +YTSGTTG PKG ML+H+N+L
Sbjct: 199 DQLYDQG----AAFKIANPTAFEDAVARSRLDDTALLIYTSGTTGLPKGAMLSHENILAT 254
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQP 291
+ S + D+ L LP H+ ER Y + G + + + + D++Q P
Sbjct: 255 MESGARSLECYATDEQLCFLPLCHILERNVSVYLPMAAGSTVNFAESPETVFDNIQEVSP 314
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+VP V+E +YS RV+ A AF R N
Sbjct: 315 ATFFAVPRVWEKVYS-------------RVLVLAQEATWPGRWAFNRAVAAGAARAN--- 358
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL-- 409
Y++A A+ + + + + + + LV + ++ +G+ + G G+ P+ +L
Sbjct: 359 --YVLA------AKPVPSGIALRYRIWDLLVLRNLRRMLGLDRLRRGGTGAAPISPELLR 410
Query: 410 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 469
+Y +IGV + GYG+TE++ + AA R + G+VG + EI+I
Sbjct: 411 WYWSIGVPLIEGYGMTENAGLTAANRVLSHRPGTVGQAVPGVEIRI-----------APD 459
Query: 470 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 529
G +++ G QGY+ P T + EDGWL TGD+G + G L + GR
Sbjct: 460 GEIQLWGLNNFQGYWNKPEKTAETYTEDGWLRTGDVGQLDD----------AGFLTITGR 509
Query: 530 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 589
KD I+ + G+N+ P E+E S I VVIG ++ +I+ D+E V A+
Sbjct: 510 IKDIIITAGGKNITPAEIESRLKFSHYISDAVVIGDRRKFLTCLIMIDQENVEKFAQDRK 569
Query: 590 IVHAD-ASELSKEKTISLLYGEL 611
I +D AS + E+ + L+ GE+
Sbjct: 570 IPFSDFASLCAAEQVVDLIRGEV 592
>gi|305681101|ref|ZP_07403908.1| AMP-binding enzyme [Corynebacterium matruchotii ATCC 14266]
gi|305659306|gb|EFM48806.1| AMP-binding enzyme [Corynebacterium matruchotii ATCC 14266]
Length = 610
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 237/526 (45%), Gaps = 63/526 (11%)
Query: 59 EILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIY 118
E+ + A+G GV+ ++++L S+ W + D + A GA++V SS ++ I
Sbjct: 54 EVYEVAKGFIANGVQQGDRIALLSETRYEWSLLDFAIWAAGAVSVPIYGSSSLSQIEWII 113
Query: 119 NHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIID 178
S +V E E + + + LL G S + I + I
Sbjct: 114 EDSGAVFAVTETREHTELMKNLVLGEDGKP---LLHGSTSQL-----RRILEINASAIAT 165
Query: 179 LGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY 238
L E R D D R H S D+A+ VYTSGTTG PKG LTH N L ++ L
Sbjct: 166 LKFEGRPIDDDQVDERIH----ATKSRDLASLVYTSGTTGRPKGCRLTHANWLSEVHGLL 221
Query: 239 DI---VPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRNLKDDLQRYQPHYM 294
A G + L+ LP HV RA + G + ++ L + QR +P+ +
Sbjct: 222 TNPIGAIARPGSRVLTFLPLAHVLSRAVSLAVAIGGGTQSHWSNFSTLGVEFQRARPNLI 281
Query: 295 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 354
+ VP V+E +++ SA A +R + + A E + PS
Sbjct: 282 LGVPRVFEKVHN---------SAVANAAAGGPVRAALFHKARNVAIEYSRALDTSEGPSR 332
Query: 355 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 413
++ L H ++LVY KI++A+G S +SGG ++ I F+
Sbjct: 333 MLKL---------------QHKTYDRLVYSKIRAAMGNSVHYAISGGSAMSPEILHFFRG 377
Query: 414 IGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK 473
IG + GYGLTE++ A +G+VG PI ++I D +E+L
Sbjct: 378 IGAPIYEGYGLTETTAA-ATVDFVDQKIGTVGPPIGGVSVRIND--DSEIL--------- 425
Query: 474 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 533
++G+ V GY+ NP+AT ++ +DGW NTGD+G I G LV+ GR KD
Sbjct: 426 IKGTTVFDGYWNNPTATAESFTDDGWFNTGDLGEILE----------SGHLVITGRKKDL 475
Query: 534 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
IV + G+NV P +E+A + LI Q +V+G + G ++ D++
Sbjct: 476 IVTAGGKNVSPEPMEDALVAHPLISQAMVVGDGKPFIGLLVTLDED 521
>gi|329946418|ref|ZP_08293985.1| AMP-binding enzyme [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527394|gb|EGF54392.1| AMP-binding enzyme [Actinomyces sp. oral taxon 170 str. F0386]
Length = 633
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 242/548 (44%), Gaps = 77/548 (14%)
Query: 40 RISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATG 99
R S R+R S ++ + A GL G++P + + + S S W + D G
Sbjct: 53 RTSPLGRRWREMSASAFRTQVREVAAGLVARGLEPGDTIGIMSHTSYEWTLLDFAAWEAG 112
Query: 100 AINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSS 159
+ V SS+E+ I + + + VEN AM ++ G +S
Sbjct: 113 LVVVPVYETSSAEQAQWILSDAGVRLIVVEN--------------EAMAAMV---GALTS 155
Query: 160 VAPDIVE-EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 218
P++ + ++ +++ L R + D R + + +AT VYTSGTTG
Sbjct: 156 TVPELADLQVLCIERQDVLGLIEAGRGVDAGELDRRT----AALTAQSLATIVYTSGTTG 211
Query: 219 NPKGVMLTHKNLLHQIRSLYDIVPAENGD---KFLSMLPPWHVYERACGYFIF-SR-GIE 273
PKGV L+H NL+H ++ VP G +FL LP HV R I SR G+
Sbjct: 212 RPKGVELSHGNLVHLCVNVCPHVPEVLGGEEVRFLLFLPLAHVLGRFVEIAIVCSRSGVL 271
Query: 274 LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 333
VRNL +DL ++P +++VP V+E +Y+ + ++ AR+ V R + + AY
Sbjct: 272 GHVPDVRNLVNDLGSFRPTAVLAVPRVFEKIYNAADAK---ATGARQKVFRMAAKTAIAY 328
Query: 334 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-- 391
+ EG ++ ++ ++LV+ ++S +G
Sbjct: 329 SRALDTPEGPSRRLRAQRTAF------------------------DRLVFSTLRSVLGGR 364
Query: 392 ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHT 451
++ VSGGG L + FY GV V GYGLTE+ + P +G+VG PI
Sbjct: 365 VTHV-VSGGGPLGERLGHFYRGAGVTVLEGYGLTETMGPCSVNLPGATRIGTVGTPIPGC 423
Query: 452 EIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPH 511
I + G G V VRG GY NP AT +A +GWL TGDIG
Sbjct: 424 AISL-----------GDDGEVLVRGIGTFTGYHNNPEATAEAFTAEGWLRTGDIGSFEGA 472
Query: 512 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 571
G L + GR K+ IV + G+NV P LE+ L+ Q++V+G+++ G
Sbjct: 473 E---------GFLRITGRKKELIVTAGGKNVAPAPLEDRLRGHPLVSQVLVVGENRPCVG 523
Query: 572 AIIVPDKE 579
A++ D E
Sbjct: 524 ALVTLDAE 531
>gi|315604688|ref|ZP_07879751.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313700|gb|EFU61754.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 627
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 244/575 (42%), Gaps = 78/575 (13%)
Query: 13 ILSSLDYHRHGFRVFTRNCVDAVATRIRISRR---NHRFRVFCESKLEQEILDFAEGLRV 69
+L +D H R+ + V ATR I R+ +R + E+ A GL
Sbjct: 31 VLVRVDEHTTIPRLL-KERVQRGATRPLILRKVGMGDTWRPVTAREFYDEVQSVAAGLIA 89
Query: 70 IGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVE 129
G++P +++++ S W + D A I V SS +++ H+ ++ V L V
Sbjct: 90 RGLQPGDRVAIMSRTRYEWTLLDFACWAAALIPVPIYETSSIDQVAHVLTDAD-VDLVVT 148
Query: 130 NPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSD 189
I T + + E+ + I L E D
Sbjct: 149 ETVSMAEIVRTAAEREGR----------------VNTEVLSLDSEAIDTLIAEGATTPRD 192
Query: 190 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENG 246
AR E + DDI+T VYTSGTTG PKG +L+H+N + + + +P A
Sbjct: 193 RVVARS----EALTKDDISTIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGTT 248
Query: 247 DKFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY 305
+ L LP HV+ R F I G+ ++NL DL ++P Y++ VP V E +Y
Sbjct: 249 SRLLLFLPLAHVFARFLQVFQISGNGVMGHAPNIKNLLPDLASFRPSYLLVVPRVLEKIY 308
Query: 306 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 365
+ + S +R V R +++ AY+ EG PS
Sbjct: 309 NSADTK---SRGPKRKVFRWAAKVAIAYSRALDTDEG---------PS------------ 344
Query: 366 IICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 424
A L H LA+KLVY++I + G + +SGG L + FY IG+ V GYGL
Sbjct: 345 ---ASLKAQHALADKLVYQQIIRLVGGNADYIISGGAPLATWLAHFYRGIGIPVLEGYGL 401
Query: 425 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 484
TE+ ++ P + +G+VG + KI D G + ++G V QGY
Sbjct: 402 TETVGPVSVNTPRLSKIGTVGPALPPMSFKISD-----------DGEILLKGPSVFQGYN 450
Query: 485 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 544
+P AT +DGW TGD+G S G + + GRAKD IV + G+NV P
Sbjct: 451 NDPGATAACFTDDGWFRTGDLG----------SLDRDGYVSITGRAKDIIVTAGGKNVTP 500
Query: 545 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
LE LI Q++V+G + A+I D E
Sbjct: 501 ASLENPMRSHPLISQVLVVGDQRPFVAALITLDAE 535
>gi|443705653|gb|ELU02086.1| hypothetical protein CAPTEDRAFT_224649 [Capitella teleta]
Length = 649
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 166/599 (27%), Positives = 263/599 (43%), Gaps = 82/599 (13%)
Query: 29 RNCVDAVATRIRISRRNHRFRVFCESKLE------QEILD----FAEGLRVIGVK--PEE 76
R DA +RI++ LE Q I + F L G+K E
Sbjct: 44 RTTYDAFTRGLRITKNGPFVGTRSGPNLEYEWESYQSIFNKAQQFGSALLARGLKHGGET 103
Query: 77 KLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNR 136
+ +F++N W++AD + V ++ + +I N +E A+ +
Sbjct: 104 FVGIFANNRPEWVIADLATAMFSMVYVPLYDTLGTDAVTYIMNQTEMSAVTCDTVSKAMV 163
Query: 137 IAETLCSKAAMRFIILLWGKKSSVAPDIVEE--IPVFSYDEIIDLGRESRKAFSDSNDAR 194
+ + ++++II+ W + + +E I V + E ++ G+ K S+ +
Sbjct: 164 MLNSAADTPSLKYIIV-WEELTPEVKAKAQETHIEVLTLAEFLESGK---KKLSEPVPPK 219
Query: 195 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI----RSLYDIVPAENGDKFL 250
D++AT YTSGTTGNPKGV LTH+ LL I S++ IV N D +
Sbjct: 220 ---------PDNLATICYTSGTTGNPKGVCLTHRALLSNIASVMMSIHPIVINSN-DSHI 269
Query: 251 SMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDDLQRYQPHYMISVPLVYETLYSGI 308
S LP H++ER I G + ++ VR L +DLQ P +VP L + I
Sbjct: 270 SYLPLAHMFERLVHLMIVQHGARIGFSRGDVRLLTEDLQALSPTIFPTVP----RLLNRI 325
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
++ + ++ + L ++F+ L R I
Sbjct: 326 HDKVLMGVSGSKIKS-MLFNLAFS--------RKMALLRQ---------------GVITN 361
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI-DLFYEAIGVKVQVGYGLTE 426
+W +KLV+ K+Q +G + + G L H+ D A G V GYG TE
Sbjct: 362 TSVW------DKLVFSKVQKLLGGRVRFCIVGSAPLAAHVLDFTRAAFGCLVTEGYGQTE 415
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
++ ++ P + G VG P+ +K+VD + KG V VRG+ +M GY+K+
Sbjct: 416 ATAGVSITLPHEYIPGQVGPPLPCNHVKLVDVPEMDYYAKDGKGEVCVRGTNLMSGYYKD 475
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
P TK+A+DEDGW++TGD+G P G L + R K L+ GE + P +
Sbjct: 476 PERTKEAIDEDGWVHTGDVGQWMPQ----------GTLKIIDRRKHIFKLAQGEYLAPEK 525
Query: 547 LEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 604
+E RSSL+ Q+ V G Q P AI+VPD E + AK+ + D EL + KT+
Sbjct: 526 VEGVYTRSSLVAQVFVDGNSLQSFPVAIVVPDPEVLPGWAKKQGL-SGDIQELCENKTV 583
>gi|425068831|ref|ZP_18471947.1| hypothetical protein HMPREF1311_02013 [Proteus mirabilis WGLW6]
gi|404598731|gb|EKA99199.1| hypothetical protein HMPREF1311_02013 [Proteus mirabilis WGLW6]
Length = 602
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 266/577 (46%), Gaps = 62/577 (10%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ L +GV +E + +FS NS W +AD L A+ V + SS E+ +I N ++
Sbjct: 52 LSNALLDMGVAVQENVGIFSQNSIDWSIADIATLQLRAVTVPLYATSSVEQAAYIINDAD 111
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V + + ++ ++E ++ II+ + + + P IP + +I +
Sbjct: 112 IRILFVGDQKEYDVVSELALLCPQLKHIIV-FNSQVVLNP----TIPSYHLTNLIS-DCQ 165
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
SR D+ + + DD+ T +YTSGTTG PKGVML + NL Q+ +
Sbjct: 166 SRY------DSLLQQRIDECCLDDLFTLIYTSGTTGEPKGVMLDYTNLASQLYLHDQRLS 219
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D L LP HV+ERA +++ G I + T +++ + +P M +VP Y
Sbjct: 220 LSDKDVSLCFLPLSHVFERAWSFYVMHTGAINVYLTDTHAVREAMAAVKPTVMCAVPRFY 279
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +YS IQ+++ + R+ + FK + L + +KQ +A
Sbjct: 280 EKVYSAIQEKVSQAPRLRQWM-------------FK-----WALKQGEKQRQAHLA---- 317
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQV 420
R + + + A+K V + ++ +G + + G L + F+ A G+ ++
Sbjct: 318 --GRSLGVLSQWCYRFADKKVLQPLRQILGGRVRFLPAAGARLDDAVIGFFLAAGINIKY 375
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYG+TE+ ++ LGS+G P+ E++I E NE ++VRGS VM
Sbjct: 376 GYGMTETCATVSCWEENHYKLGSIGTPLPGVEVRI--GEENE---------IQVRGSIVM 424
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GYF P T A EDGWL TGD G + G+L + R KD + S G+
Sbjct: 425 KGYFNKPEETVAAFTEDGWLRTGDAGALDEE----------GMLYITERLKDLMKTSNGK 474
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
+ P +E + I I VI ++ A+IVP + + A+ L++ + D EL +
Sbjct: 475 YIAPQMIEGTLGQDRFIEHIAVIADTRKFVSALIVPCFDALEEHARALNLKYHDRIELLR 534
Query: 601 EKTISLLYGE-LRKWTSK-CSF-QIGPIHVVDEPFTV 634
I L+ E LR+ SF Q+ ++ E FT+
Sbjct: 535 HTKIKELFDERLREMQRNFASFHQVKRFTLLAEGFTM 571
>gi|319762967|ref|YP_004126904.1| AMP-dependent synthetase/ligase [Alicycliphilus denitrificans BC]
gi|317117528|gb|ADV00017.1| AMP-dependent synthetase and ligase [Alicycliphilus denitrificans
BC]
Length = 611
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 260/589 (44%), Gaps = 64/589 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+ ++ + ++ + G+ ++++ N + DQ +ATG + V + +
Sbjct: 50 SQAQERVRQWSRAIAASGLPQGARIAVLLPNGLDAMSIDQAAMATGCVPVPLHAIDNPGS 109
Query: 114 LLHIYNHSESVALAVENPEFFNRI-AETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+ +I +E L V++ + R+ L M + PD V P+ +
Sbjct: 110 IAYILQDAEVSLLVVQDAAQWERVRGVGLPLPHLMGVVATAQAPAQDAGPDAVPVAPLSA 169
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+ + A +D+ G +D+A VYTSGTTG PKGVMLTH N++
Sbjct: 170 WLQ---------HAAADTP------LPPPPGPEDLAAIVYTSGTTGKPKGVMLTHANVIA 214
Query: 233 QIRS-LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
+++ L IVP + D FLS LP H +ER GY++ + G + Y +V L DD+
Sbjct: 215 DVKAVLQRIVPTPD-DVFLSFLPLSHTFERTGGYYLPVASGSCVAYARSVAQLADDMLTV 273
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P ++SVP +YE +++ + + + +S ++ A + FC +
Sbjct: 274 RPTVLVSVPRIYERVHAKLIETLSSSP----------WKMQLFQAAQAVGWRRFCAAQRL 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P A W R A+ WP L LV + + + G + VSGG LP I
Sbjct: 324 PAPQDDGA---GSWMR---ALPWP---LLRALVARPLLARFGGRVRVAVSGGAPLPPAIA 374
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
+ +G+ + GYG+TE++PV++ N +VG + E++I G
Sbjct: 375 QCFLGLGLPLVQGYGMTETTPVVSVNALDDNDPSTVGRALPGVEVRI-----------GE 423
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
++VRG VM+GY+K P T +A+ E GWL TGD I GR R + G
Sbjct: 424 NRELQVRGPIVMKGYWKRPEDTARAIGEGGWLGTGDQAEIV----DGRIR-------ILG 472
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R K+ IV STGE V P +LE A L Q V+G+ + + EE A +L
Sbjct: 473 RIKEIIVTSTGEKVPPADLELAITADPLFEQAFVVGEQRPFIACVAAVQAEEWRQLAGQL 532
Query: 589 SIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 635
+ D + L+ + K + P +H+V EP+T+
Sbjct: 533 GLDPDDPASLAHPSATRAALARIEKLAAGFPRYAVPRAVHLVREPWTIE 581
>gi|332244719|ref|XP_003271521.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Nomascus
leucogenys]
Length = 698
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 244/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + + S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVLM----DAYGSELVERGQKCGVEIISMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ +P
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKATEKALP 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ + G ++ + +R L DDL+ QP VP +
Sbjct: 310 LNASDTHISFLPLAHMYEQLLECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ + IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCSLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPVKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++ E
Sbjct: 565 GEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWARKRGF-EGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|425071633|ref|ZP_18474739.1| hypothetical protein HMPREF1310_01049 [Proteus mirabilis WGLW4]
gi|404598491|gb|EKA98961.1| hypothetical protein HMPREF1310_01049 [Proteus mirabilis WGLW4]
Length = 602
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 266/577 (46%), Gaps = 62/577 (10%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ L +GV +E + +FS NS W +AD L A+ V + SS E+ +I N ++
Sbjct: 52 LSNALLDMGVAVQENVGIFSQNSIDWSIADIATLQLRAVTVPLYATSSVEQAAYIINDAD 111
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V + + ++ ++E ++ II+ + + + P IP + +I +
Sbjct: 112 IRILFVGDQKEYDVVSELALLCPQLKHIIV-FNSQVVLNP----TIPSYHLTNLIS-DCQ 165
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
SR D+ + + DD+ T +YTSGTTG PKGVML + NL Q+ +
Sbjct: 166 SRY------DSLLQQRIDECCLDDLFTLIYTSGTTGEPKGVMLDYTNLASQLYLHDQRLS 219
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D L LP HV+ERA +++ G I + T +++ + +P M +VP Y
Sbjct: 220 LSDKDVSLCFLPLSHVFERAWSFYVMHTGAINVYLTDTHAVREAMAAVKPTVMCAVPRFY 279
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +YS IQ+++ + R+ + FK + L + +KQ +A
Sbjct: 280 EKVYSAIQEKVSQAPRLRQWM-------------FK-----WALKQGEKQRQAHLA---- 317
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQV 420
R + + + A+K V + ++ +G + + G L + F+ A G+ ++
Sbjct: 318 --GRSLGVLSQWCYRFADKKVLQPLRQILGGRVRFLPAAGARLDDAVIGFFLAAGINIKY 375
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYG+TE+ ++ LGS+G P+ E++I E NE ++VRGS VM
Sbjct: 376 GYGMTETCATVSCWEENHYKLGSIGTPLPGVEVRI--GEENE---------IQVRGSIVM 424
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GYF P T A EDGWL TGD G + G+L + R KD + S G+
Sbjct: 425 KGYFNKPEETVAAFTEDGWLRTGDAGALDE----------DGMLYITERLKDLMKTSNGK 474
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
+ P +E + I I VI ++ A+IVP + + A+ L++ + D EL +
Sbjct: 475 YIAPQMIEGTLGQDRFIEHIAVIADTRKFVSALIVPCFDALEEHARALNLKYHDRIELLR 534
Query: 601 EKTISLLYGE-LRKWTSK-CSF-QIGPIHVVDEPFTV 634
I L+ E LR+ SF Q+ ++ E FT+
Sbjct: 535 HTKIKELFDERLREMQRNFASFHQVKRFTLLAEGFTM 571
>gi|239987540|ref|ZP_04708204.1| putative long chain fatty acid:CoA ligase [Streptomyces roseosporus
NRRL 11379]
Length = 615
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 157/586 (26%), Positives = 254/586 (43%), Gaps = 63/586 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+ + + A GL +GV+PEE+++L S W++ D G++ GA +++EE
Sbjct: 39 SQASERVYAIAAGLIALGVQPEERVALSSATRVEWILIDLGVMCAGAATTTIYPSTNAEE 98
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
I SES L E+ E + E + ++++ + E P
Sbjct: 99 SAFILADSESRILIAEDAEQLAKARERRTELPDLAHVVVI----DPAGAEPAEGDPEGWI 154
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ DL + + + DA + I +D +AT +YTSGTTG PKGV L H N +
Sbjct: 155 ITLADLEARGNELLAKTPDAVTE-RVAAITADQLATLIYTSGTTGRPKGVRLPHDNWSYM 213
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-----VRNLKDDLQR 288
++ D LP HV+ G + S IE+ + + + ++L
Sbjct: 214 AKATVSTGLINADDVQYLWLPLAHVF----GKVLTSGQIEVGHVTAIDGRIDKIIENLPV 269
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
QP YM +VP ++E +Y+G+ + A+ + + + Y + + F T
Sbjct: 270 VQPTYMAAVPRIFEKVYNGVASKARAGGGAKYKIFQWAAGVGREYAKVSQ--DNFRRTGK 327
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
P L A H +A+ LV+ KI+ A G +A VSG +L I
Sbjct: 328 ASVPFALGA----------------KHKVADALVFSKIREAFGGRLRACVSGSAALAPDI 371
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
F+ GV + GYGLTESS G+VG P+ TE++I D
Sbjct: 372 GYFFAGAGVHILEGYGLTESSAASFVNPGEAYRTGTVGKPLPGTEVRIAD---------- 421
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G + +RG +MQGY K P T + L+ DGW +TGDIG ++ G L +
Sbjct: 422 -DGEILLRGPGIMQGYHKLPDKTDEVLESDGWFHTGDIGELS----------ADGYLRIT 470
Query: 528 GRAKDTIVLSTGENVEPLELE-EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R KD I S G+ V P E+E + + I+V G D+ A+I D+ +L A
Sbjct: 471 DRKKDLIKTSGGKYVAPAEVEGQFKAVCPFVSNILVHGADRNFCTALIALDEPTILGWAA 530
Query: 587 RLSIVHADASE-LSKEKTISLLYG-------ELRKWTSKCSFQIGP 624
+ +E ++ +T+ L+ G L++W + F++ P
Sbjct: 531 ENGLAGKSYAEVVAAPQTVELIDGYVTRLNEGLQRWQTIKKFRLLP 576
>gi|91791441|ref|YP_561092.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
gi|91713443|gb|ABE53369.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
Length = 597
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 245/532 (46%), Gaps = 64/532 (12%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A+ + G++ ++ + S N +W AD G+L AI V S+ E+ I N + +
Sbjct: 50 AKAMIKFGLQAQDTAVILSQNCPQWTCADIGLLKARAIVVPVYPSSTQEQASFIINDAGA 109
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII--DLGR 181
L V++ E ++ + ++ ++++ + P +++ +D +I DL
Sbjct: 110 KVLFVDDAEQYHMACKLQAVCPSVEYLVVF----DANVP-LLDTPNHLHFDSLITEDLSA 164
Query: 182 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
+ R A ++ + + DD+ T +YTSGTTG+PKGVML ++N+ IR +
Sbjct: 165 QDR-ALTE--------RLQAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDTCL 215
Query: 242 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLV 300
GD L+ LP HV+ER+ +F RG +Y +K+ + +PH + VP
Sbjct: 216 NFNPGDTSLAFLPLSHVFERSWSFFALCRGGRNVYLKDTMKIKEAIVAVRPHTLCVVPRF 275
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
E +YS +Q ++ + +R+ + +A A +R +E + + + + S +++L
Sbjct: 276 LEKVYSAVQDKVSKAPKSRQRL------FHWAMAAGQRQFE---VNQGRAKTSAILSL-Q 325
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 419
W ++A KLV+ K+Q+ +G K GG +L M + F+ I + V
Sbjct: 326 W--------------VVANKLVFSKLQAVLGGRLKFMPCGGAALDMTVGNFFHGINLPVL 371
Query: 420 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 479
GYG+TE++ + V GS G P+ TE+K+ G+ + VRG V
Sbjct: 372 CGYGMTETNATVTMNTLNNRVPGSNGKPLPETEVKL-----------GAFDEIMVRGDAV 420
Query: 480 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 539
M+GY+K P T EDGWL TGD G G L + R K+ + S G
Sbjct: 421 MRGYYKRPDDTAATF-EDGWLKTGDAGRFDEQ----------GNLFITDRIKELMKTSNG 469
Query: 540 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
+ + P +E I Q+ +I + A+IVP E + AK +V
Sbjct: 470 KYIAPQRVEGKVGSCPFIEQVAIIADGRNFVSALIVPSFEALEYWAKEQGLV 521
>gi|218781722|ref|YP_002433040.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218763106|gb|ACL05572.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 599
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 146/542 (26%), Positives = 250/542 (46%), Gaps = 68/542 (12%)
Query: 66 GLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVA 125
G +GV+ +++ +FSDN WL +D G L GA+ V + EE +I S A
Sbjct: 48 GFASLGVERGDRIGIFSDNYLEWLYSDMGGLGIGAVVVPLYPTLTEEEAGYIVQDSGCKA 107
Query: 126 LAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRK 185
L V + E + + +++ I+ + ++ ++ S+ ++++G + +
Sbjct: 108 LVVGDKEQLEKAKRIRAANPSLQAIVTIGDVPTNGDGGLI------SFVRLMEMGVKKNE 161
Query: 186 A----FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 241
F S K D+AT VYTSGTTG PKGVM+TH+N++ I+ L I
Sbjct: 162 QDPGLFERSAAMSK--------PADLATIVYTSGTTGMPKGVMITHQNIMFVIQGLAGIT 213
Query: 242 P--AENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISV 297
P A+ D+ + LP HV+ R +++ GI + L +DLQ +P +++V
Sbjct: 214 PGYADEKDQTVPFLPLCHVFGRIADHYMGMYAGITASFAENFTTLLEDLQERRPTIIMAV 273
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P V E ++ I +Q+ T + + F ++ ++I E R K+P L
Sbjct: 274 PRVCEKVFQKIMEQVETQPLPMQKI--------FYWS--QKIGEQVSELREAKKPVPLAL 323
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 416
+ + LA +LV+KK+Q +G K ++ GG I LF+ A G+
Sbjct: 324 ALKY--------------RLAYQLVFKKLQDRLGGRVKYIMAAGGPTAREIQLFFNAAGI 369
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
V GYGLTE++ A + +G+VG P+ ++KI S G V ++G
Sbjct: 370 SVVEGYGLTETTAPAALSNLSDYRIGTVGPPLPGVDVKIA-----------SDGEVLIKG 418
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
V GY+ T +A EDG+ +GD+G + G L + GR KD I+
Sbjct: 419 GNVFGGYWNLEQETSRAFTEDGYFMSGDLGELDDR----------GFLKITGRKKDLIIT 468
Query: 537 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
+ G+N+ P ++E + L +VIG ++ A++ + E+ A++ I ++
Sbjct: 469 AGGKNIAPQKIESLFMSDPLFLHFIVIGDRRKYLSALVNINMEQAQTLAEKEGIAYSQPR 528
Query: 597 EL 598
EL
Sbjct: 529 EL 530
>gi|330825047|ref|YP_004388350.1| long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
gi|329310419|gb|AEB84834.1| Long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
Length = 611
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 258/589 (43%), Gaps = 64/589 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+ ++ + ++ + G+ ++++ N + DQ +ATG + V + +
Sbjct: 50 SQAQERVRQWSRAIAASGLPQGARIAVLLPNGLDAMSIDQAAMATGCVPVPLHAIDNPGS 109
Query: 114 LLHIYNHSESVALAVENPEFFNRI-AETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFS 172
+ +I +E L V++ + R+ L M + PD V P+ +
Sbjct: 110 IAYILQDAEVSLLVVQDAAQWERVRGVGLPLPHLMGVVATAKAPAQDAGPDAVPVAPLSA 169
Query: 173 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 232
+ + + A G +D+A VYTSGTTG PKGVMLTH N++
Sbjct: 170 WLQ---------------HAAADTPLPPPPGPEDLAAIVYTSGTTGKPKGVMLTHANVIA 214
Query: 233 QIRS-LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRY 289
+++ L IVP + D FLS LP H +ER GY++ + G + Y +V L DD+
Sbjct: 215 DVKAVLQRIVPTPD-DVFLSFLPLSHTFERTGGYYLPVASGSCVAYARSVAQLADDMLTV 273
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
+P ++SVP +YE +++ + + + +S ++ A + FC +
Sbjct: 274 RPTVLVSVPRIYERVHAKLIETLSSSP----------WKMQLFQAAQAVGWRRFCAAQRL 323
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
P A W R A+ WP L LV + + + G + VSGG LP I
Sbjct: 324 PAPQDDGA---GSWMR---ALPWP---LLRALVARPLLARFGGRVRVAVSGGAPLPPAIA 374
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
+ +G+ + GYG+TE++PV++ N +VG + E++I G
Sbjct: 375 QCFLGLGLPLVQGYGMTETTPVVSVNALDDNDPSTVGRALPGVEVRI-----------GE 423
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
++VRG VM+GY+K P T +A+ E GWL TGD I GR R + G
Sbjct: 424 NRELQVRGPIVMKGYWKRPEDTARAIGEGGWLGTGDQAEIV----DGRIR-------ILG 472
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 588
R K+ IV STGE V P +LE A L Q V+G+ + + EE A +L
Sbjct: 473 RIKEIIVTSTGEKVPPADLELAITADPLFEQAFVVGEQRPFIACVAAVQAEEWRQLAGQL 532
Query: 589 SIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 635
+ D + L+ + K + P +H+V EP+T+
Sbjct: 533 GLDPDDPASLAHPSATRAALARIEKLAAGFPRYAVPRAVHLVREPWTIE 581
>gi|221041522|dbj|BAH12438.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 244/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+++ + ++VE + V S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVVM----DAYGSELVERGQRCGVEVTSMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ +P
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATEKALP 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ + G ++ + +R L DDL+ QP VP +
Sbjct: 310 LSASDTHISYLPLAHIYEQLLKCVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++ E
Sbjct: 565 GEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWAQKRGF-EGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|291444500|ref|ZP_06583890.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291347447|gb|EFE74351.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 629
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 157/586 (26%), Positives = 254/586 (43%), Gaps = 63/586 (10%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
S+ + + A GL +GV+PEE+++L S W++ D G++ GA +++EE
Sbjct: 53 SQASERVYAIAAGLIALGVQPEERVALSSATRVEWILIDLGVMCAGAATTTIYPSTNAEE 112
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
I SES L E+ E + E + ++++ + E P
Sbjct: 113 SAFILADSESRILIAEDAEQLAKARERRTELPDLAHVVVI----DPAGAEPAEGDPEGWI 168
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ DL + + + DA + I +D +AT +YTSGTTG PKGV L H N +
Sbjct: 169 ITLADLEARGNELLAKTPDAVTE-RVAAITADQLATLIYTSGTTGRPKGVRLPHDNWSYM 227
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-----VRNLKDDLQR 288
++ D LP HV+ G + S IE+ + + + ++L
Sbjct: 228 AKATVSTGLINADDVQYLWLPLAHVF----GKVLTSGQIEVGHVTAIDGRIDKIIENLPV 283
Query: 289 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 348
QP YM +VP ++E +Y+G+ + A+ + + + Y + + F T
Sbjct: 284 VQPTYMAAVPRIFEKVYNGVASKARAGGGAKYKIFQWAAGVGREYAKVSQ--DNFRRTGK 341
Query: 349 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 407
P L A H +A+ LV+ KI+ A G +A VSG +L I
Sbjct: 342 ASVPFALGA----------------KHKVADALVFSKIREAFGGRLRACVSGSAALAPDI 385
Query: 408 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 467
F+ GV + GYGLTESS G+VG P+ TE++I D
Sbjct: 386 GYFFAGAGVHILEGYGLTESSAASFVNPGEAYRTGTVGKPLPGTEVRIAD---------- 435
Query: 468 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 527
G + +RG +MQGY K P T + L+ DGW +TGDIG ++ G L +
Sbjct: 436 -DGEILLRGPGIMQGYHKLPDKTDEVLESDGWFHTGDIGELS----------ADGYLRIT 484
Query: 528 GRAKDTIVLSTGENVEPLELE-EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 586
R KD I S G+ V P E+E + + I+V G D+ A+I D+ +L A
Sbjct: 485 DRKKDLIKTSGGKYVAPAEVEGQFKAVCPFVSNILVHGADRNFCTALIALDEPTILGWAA 544
Query: 587 RLSIVHADASE-LSKEKTISLLYG-------ELRKWTSKCSFQIGP 624
+ +E ++ +T+ L+ G L++W + F++ P
Sbjct: 545 ENGLAGKSYAEVVAAPQTVELIDGYVTRLNEGLQRWQTIKKFRLLP 590
>gi|357976340|ref|ZP_09140311.1| AMP-dependent synthetase and ligase [Sphingomonas sp. KC8]
Length = 598
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 164/613 (26%), Positives = 277/613 (45%), Gaps = 93/613 (15%)
Query: 42 SRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAI 101
++R+ + ++ Q+I + L+ G+K +++ L S+N W +AD ++A G +
Sbjct: 29 AKRDGTWTPTSWTEAAQQIASLSAALKAQGLKRGDRVMLVSENRPEWCIADLAIMAAGLV 88
Query: 102 NVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVA 161
V + ++ + HI +S + A+ V ++A TL A MR SS
Sbjct: 89 TVPTYTTNTERDHAHILENSGARAVIVST----AKLARTLMP-AVMR---------SSNC 134
Query: 162 PDIVEEIPVFSYDEIIDLGRESRKAFSD--------SNDARKHYKYETIGSDDIATYVYT 213
++ P + +G+ +F D D + +D+A +YT
Sbjct: 135 HHVIGIEP-------LRIGQAGDTSFHDWATLIAAHPADIAEAEAAADFQREDLACIIYT 187
Query: 214 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG---DKFLSMLPPWHVYERACG-YFIFS 269
SGT G+P+GV H +LH + I+ + G + FLS LP H YE + G +F
Sbjct: 188 SGTGGSPRGVRQHHGAILHNVAGCTTIISEDFGWDDEVFLSFLPLSHAYEHSGGQHFPIG 247
Query: 270 RGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 328
G ++ Y+ + L +++ +P M+ VP ++E L + ++ S + VA+ L+R
Sbjct: 248 LGAQIYYSEGLEKLAANIEEVRPTIMVVVPRLFEVL----RARVLKSVEKQGRVAQYLMR 303
Query: 329 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-Q 387
L QK + + L DW P+ ++ + + K+ Q
Sbjct: 304 --------------RALVIGQKDYAGRMPLWDW-----------PMEMILRRTLKPKVGQ 338
Query: 388 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV-LGSVGH 446
G KA VSGG L + LF+ ++G+ GYG TE++PVI+ RP+ + + +VG
Sbjct: 339 RFGGRMKAMVSGGAPLNPEVGLFFHSLGLTFLQGYGQTEAAPVISCNRPSAGIKMDTVGP 398
Query: 447 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 506
P+ E++I D G + VRG VM GY++N T + L DGWL+TGD+G
Sbjct: 399 PLPGVEVRIAD-----------DGEILVRGELVMHGYWRNEEETARVL-RDGWLHTGDVG 446
Query: 507 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 566
I +RGR +V+ R KD IV G+NV P ++E I Q ++ G
Sbjct: 447 HI---DARGR-------IVITDRKKDIIVNDKGDNVAPQKVEGMLTLEPEILQAMIAG-- 494
Query: 567 QRRPG--AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF--QI 622
RRP +IVPD E A + + A+ + + L + + + S ++
Sbjct: 495 DRRPHIVGLIVPDPEWAREWAGAEGVAYDPAALRADPRFQKALMAAVDRVNTSLSVIEKV 554
Query: 623 GPIHVVDEPFTVN 635
I + DEPFT+
Sbjct: 555 RRILIADEPFTIE 567
>gi|410955999|ref|XP_003984633.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Felis
catus]
Length = 698
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 244/548 (44%), Gaps = 80/548 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +FS N W++ +QG A ++V +E + +I N +E + V+ PE
Sbjct: 146 PDQYIGIFSQNRPEWVIIEQGCFAYSMVSVPLYDTLGAEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ + E + +K ++ I+++ S D++E + + S + DLGR +R+
Sbjct: 206 ADTLLEGVENKLTPGLKTIVVM----DSYGIDLLERGKRCGVEIISLKAMEDLGRANRQ- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI----VP 242
+ + +D+A +TSGTTG PKG ++TH+N++ + I V
Sbjct: 261 -----------RPKPPAPEDLAVICFTSGTTGYPKGALITHQNIVSDCSAFVKITENTVD 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 310 PSPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKESELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVK 417
LW +KL++ KIQS++G K + G+ P+ + A+G +
Sbjct: 410 SLW---------------DKLIFHKIQSSLG-GKVRLMVTGAAPVSATVLTFLRAALGCQ 453
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + P G VG P+ IK+VD E L A +G V V+G
Sbjct: 454 FYEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNFIKLVDVEEMNYLAAKGEGEVCVKGP 513
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V +GY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 514 NVFKGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 563
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++
Sbjct: 564 QGEYIAPEKIENIYVRSEPVAQVFVYGESLQAFLIAIVVPDVETLCPWAQKRGFA-GSFE 622
Query: 597 ELSKEKTI 604
EL + K +
Sbjct: 623 ELCRNKDV 630
>gi|343494337|ref|ZP_08732599.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
gi|342825242|gb|EGU59741.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
Length = 602
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 258/566 (45%), Gaps = 71/566 (12%)
Query: 71 GVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVEN 130
G+ ++K+ ++S+N W +AD L + V +++ + +I ++++ L V
Sbjct: 56 GIDVQDKVGIYSNNMPEWTIADIATLQLRGVTVPIYPTNTAAQAAYIIDNADVKVLFVGE 115
Query: 131 PEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIP--VFSYDEIIDLGRESRKAFS 188
E ++ + ++ ++ DIV E S+ I+L A S
Sbjct: 116 QEQYDAAMSVFHECPKLELVV-------AMTDDIVLEDGERSLSWASFIELA-----ATS 163
Query: 189 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK 248
+++ K + E + DD+ T +YTSGTTG PKGVMLT+ N+ Q+ + N D
Sbjct: 164 PTDELGK--RLEEVELDDLLTLIYTSGTTGQPKGVMLTYANIASQLEGHDRRLGLTNQDV 221
Query: 249 FLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSG 307
L LP HV+ERA +++ +G Y +++ L +P M +VP YE ++S
Sbjct: 222 SLCFLPLSHVFERAWTFYVLYKGATNCYLKDTMQVREALGDIRPTVMCAVPRFYEKIFSA 281
Query: 308 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 367
I +++ + R+++ ++A ++ E C R +PS++
Sbjct: 282 IHEKVSKAPFIRKIL------FTWAVNMGAKMAE--C-KRTNSRPSFM------------ 320
Query: 368 CAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTE 426
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE
Sbjct: 321 ---LQRCHKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTE 377
Query: 427 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 486
++ I+ S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 378 TTATISCWDDGTFNPDSIGTSMPGAQVKI--GENNEIL---------VRGPMVMKGYYKL 426
Query: 487 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 546
P T + DE G+L TGD G G L + R K+ + S G+ + P
Sbjct: 427 PEETAKTFDEHGFLKTGDAGKFDDQ----------GNLFITDRIKELMKTSGGKYIAPQM 476
Query: 547 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------ 600
+E A + I QI VI ++ A+IVP + + AK L+I + D +L K
Sbjct: 477 IEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRMDLIKHSQVVE 536
Query: 601 --EKTISLLYGELRKWTSKCSFQIGP 624
E + L EL K+ F + P
Sbjct: 537 MFESRLEGLQKELAKFEQVKKFTLLP 562
>gi|197285928|ref|YP_002151800.1| AMP-binding protein [Proteus mirabilis HI4320]
gi|194683415|emb|CAR44161.1| AMP-binding protein [Proteus mirabilis HI4320]
Length = 602
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 156/577 (27%), Positives = 263/577 (45%), Gaps = 62/577 (10%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
+ L +GV +E + +FS NS W +AD L A+ V + SS E+ +I N +
Sbjct: 52 LSNALLDMGVAVQENVGIFSQNSIDWSIADIATLQLRAVTVPLYATSSVEQAAYIINDAN 111
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
L V + + ++ ++E ++ II+ S V + P + +L +
Sbjct: 112 IRILFVGDQKEYDVVSELALLCPQLKHIIVF---NSQVVLN-----PTIPSYHLTNLISD 163
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+ + D+ + + DD+ T +YTSGTTG PKGVML + NL Q+ +
Sbjct: 164 CQSQY----DSLLQQRIDECCLDDLFTLIYTSGTTGEPKGVMLDYTNLASQLYLHDQRLS 219
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVY 301
+ D L LP HV+ERA +++ G I + T +++ + +P M +VP Y
Sbjct: 220 LSDKDVSLCFLPLSHVFERAWSFYVMHTGAINVYLTDTHAVREAMAAVKPTVMCAVPRFY 279
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
E +YS IQ+++ + R+ + FK + L + +KQ +A
Sbjct: 280 EKVYSAIQEKVSQAPRLRQWM-------------FK-----WALKQGEKQRQAHLA---- 317
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQV 420
R + + + A+K V + ++ +G + + G L + F+ A G+ ++
Sbjct: 318 --GRSLGVLSQWCYRFADKKVLQPLRQILGGRVRFLPAAGARLDDAVIGFFLAAGINIKY 375
Query: 421 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 480
GYG+TE+ ++ LGS+G P+ E++I E NE ++VRGS VM
Sbjct: 376 GYGMTETCATVSCWEENHYKLGSIGTPLPGVEVRI--GEENE---------IQVRGSIVM 424
Query: 481 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 540
+GYF P T A EDGWL TGD G + G+L + R KD + S G+
Sbjct: 425 KGYFNKPEETVAAFTEDGWLRTGDAGALDEE----------GMLYITERLKDLMKTSNGK 474
Query: 541 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 600
+ P +E + I I VI ++ A+IVP + + A+ L++ + D EL +
Sbjct: 475 YIAPQMIEGTLGQDRFIEHIAVIADTRKFVSALIVPCFDALEEHARALNLKYHDRIELLR 534
Query: 601 EKTISLLYGE-LRKWTSK-CSF-QIGPIHVVDEPFTV 634
I L+ E LR+ SF Q+ ++ E FT+
Sbjct: 535 HTKIKELFDERLREMQRNFASFHQVKRFTLLAEGFTM 571
>gi|259507812|ref|ZP_05750712.1| long-chain-fatty-acid--CoA ligase [Corynebacterium efficiens
YS-314]
gi|259164605|gb|EEW49159.1| long-chain-fatty-acid--CoA ligase [Corynebacterium efficiens
YS-314]
Length = 616
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 252/531 (47%), Gaps = 72/531 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A+G+ GV+ ++++L +D W V D + A GA++V S SS ++ I
Sbjct: 59 NEVFAVAKGIIATGVEQGDRVALLADTRYEWSVLDYAIWAAGAVSVPIYSSSSLSQVQWI 118
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
S +V E P+ + + + ++ + K S+ + EI + D +
Sbjct: 119 IEDSGAVLAITETPDHTDLMKHLVLTEDGTPAL-----KGSTSKLRRILEINSSALDTLR 173
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
GRE S+D + + E S D+A+ VYTSGTTG PKG LTH N L ++R+L
Sbjct: 174 FEGREL------SDDLVRE-RIEATRSADLASLVYTSGTTGRPKGCELTHHNWLAEVRAL 226
Query: 238 YD------IVPAENGDKFLSMLPPWHVYERACGY-FIFSRGIELMYTAVRNLKDDLQRYQ 290
VP G + L+ LP HV RA F + ++ L +LQR +
Sbjct: 227 LTHPIGAIAVP---GSRVLTFLPLAHVLARAVSLAFTIGGATQSHWSDFSTLALELQRAR 283
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI-RISFAYTAFKRIYEGFCLTRNQ 349
P++++ VP V+E ++ T++A V AL R A + R + +
Sbjct: 284 PNFILGVPRVFEK----VRNSAATNAADGGPVKAALFARAEKAAIDYSRAQD------TE 333
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ PS R++ A H + ++LVY KI++A+G S + V+GG ++ +
Sbjct: 334 EGPS-----------RVLAAA----HKVFDRLVYAKIRAAVGNSVQYAVTGGSAMSHDLL 378
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FY IG+ + GYGLTE++ AA +G+VG P+ I+I D
Sbjct: 379 HFYRGIGIPIYEGYGLTETAAA-AAIDFEDQKIGTVGKPLPGMTIRIND----------- 426
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G + ++G + +GY+ NP AT +++ DGW NTGD+G + G LV+ G
Sbjct: 427 QGEILLKGQMLFRGYWNNPKATAESI-VDGWFNTGDLGELLD----------SGHLVITG 475
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
R KD IV + G+NV P LE+ LI Q +V+G + G ++ D +
Sbjct: 476 RKKDLIVTAGGKNVSPGPLEDIIRAHPLISQAMVVGDGKPFVGLLVTLDPD 526
>gi|380693362|ref|ZP_09858221.1| long-chain-fatty-acid--CoA ligase [Bacteroides faecis MAJ27]
Length = 601
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 156/580 (26%), Positives = 259/580 (44%), Gaps = 66/580 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A + + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRGVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE- 182
L V ++ ++++ +I+ SV D ++ +DE + +G
Sbjct: 109 RYLFVGEQYQYDSAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+ AR Y DD+A +YTSGTTG PKGVML H L Q + +D
Sbjct: 165 PHNEVVEERTARASY-------DDLANILYTSGTTGEPKGVMLHHSCYLEQFHT-HDERL 216
Query: 243 AENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPL 299
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP
Sbjct: 217 TTMTDKDVSMNFLPLTHVFEKAWSYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPR 276
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+E +Y+G+Q++I ++ ++ + I++ RI+ R K P + L
Sbjct: 277 FWEKVYAGVQEKISETTGLKKALMLDAIKVG-------RIH-NLDYLRQGKTPPVMNQL- 327
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVK 417
+ EK +Y ++ IGI + G ++P I+ F ++G+
Sbjct: 328 --------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGIN 373
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
+ VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG
Sbjct: 374 MVVGYGLTESTATVSCTLPVGYDIGSVGVVLPGLEVKI--NEDNEIL---------LRGK 422
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
+ +GY+K AT A+D DGW +TGD G+ G L L R KD S
Sbjct: 423 SITKGYYKKAEATAAAIDADGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTS 471
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
G+ + P LE + I QI +I ++ A+IVP V AK I + D ++
Sbjct: 472 NGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKDMAD 531
Query: 598 LSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTV 634
L + K I L + + + QI ++ EPF++
Sbjct: 532 LLQHPKIIGLFRARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|264678464|ref|YP_003278371.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208977|gb|ACY33075.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 649
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 266/580 (45%), Gaps = 55/580 (9%)
Query: 35 VATRIRISRRNHRFRVFCESKLEQEILDFAE----------GLRVIGVKPEEKLSLFSDN 84
+A R+R + +R F ES + L +AE L + ++++ N
Sbjct: 31 LAMRVRCTPLGEAYREFDESTDAWKSLSWAETAERVALWSCALCASNLPVGARVAILLPN 90
Query: 85 SCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSK 144
+ DQ L G + V + ++ + +I S + L V + + + RI T +
Sbjct: 91 GFDAMTIDQACLRCGYVPVPLHAIDNAGSIAYILADSGASLLVVADAKAWQRICATGQNL 150
Query: 145 AAMRFII-LLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKY---E 200
++ +I G+ + V + D + L R+ S A + + +
Sbjct: 151 PGLQAVIHAQQGRPIDSSNAYVVPVEQAEQDSVKALQRKPVIVLSAWLQAGQRHTSALPQ 210
Query: 201 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 260
++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +E
Sbjct: 211 PPKKTELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFE 270
Query: 261 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 318
R GY++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S
Sbjct: 271 RTAGYYLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASSPFK 330
Query: 319 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 378
++ A+ + ++ A + + G + + + S+ AL WL +++ L L
Sbjct: 331 HKLFDAAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLRKLVAQPL--LAQFG 385
Query: 379 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 438
+L + VSGG L I + +G+ + GYG+TE++PV++A
Sbjct: 386 GRL------------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDD 433
Query: 439 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 498
N +VG + E++I D + ++V G VM+GY+ P T +A DG
Sbjct: 434 NWPDTVGRVLPGIEVRIGDDQE-----------LQVSGQVVMRGYWNRPEDTAKAFTADG 482
Query: 499 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 558
WL TGD I GR R ++GR K+ IV STGE V P ++E+A L L
Sbjct: 483 WLRTGDQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFE 531
Query: 559 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 598
Q+ V+G+D+ I V + E M A+ + + D S L
Sbjct: 532 QVFVVGEDRPFIACIAVVGQVEWEMLARSVGLNPNDVSSL 571
>gi|332244721|ref|XP_003271522.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 2 [Nomascus
leucogenys]
gi|332244723|ref|XP_003271523.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 3 [Nomascus
leucogenys]
Length = 698
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 244/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + + S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVLM----DAYGSELVERGQKCGVEIISMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ + V
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKATENTVN 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 310 PCPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ + IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCSLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPVKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++ E
Sbjct: 565 GEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWARKRGF-EGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|365826578|ref|ZP_09368488.1| hypothetical protein HMPREF0975_00271 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365265934|gb|EHM95661.1| hypothetical protein HMPREF0975_00271 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 633
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 162/567 (28%), Positives = 248/567 (43%), Gaps = 93/567 (16%)
Query: 34 AVATRIR-------ISRRN---HRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSD 83
A+A R+R I+R++ R+R S ++ + A GL G+KP + + + S
Sbjct: 37 ALAERVRRNPDGGLIARKSPLGRRWREMSASAFRTQVREVAAGLVAEGLKPGDAVGIMSH 96
Query: 84 NSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCS 143
S W + D G + V SS+++ I + + VEN
Sbjct: 97 TSYEWTLLDFAAWEAGLVVVPVYETSSADQAQWILTDAGVKLMVVEN------------- 143
Query: 144 KAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE-----IIDLGRESRKAFSDSNDARKHYK 198
AM +I G +S P++ + + V + +I+ GR A D A
Sbjct: 144 -EAMAAMI---GALTSTVPELAD-LRVLCVERQDVLGLIEAGRGMEPAELDQRSA----- 193
Query: 199 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD---KFLSMLPP 255
+ S +AT VYTSGTTG PKGV L+H NL+H ++ VP G +FL LP
Sbjct: 194 --ALTSQSLATIVYTSGTTGRPKGVELSHGNLVHLCVNVCPHVPEVLGGAEVRFLLFLPL 251
Query: 256 WHVYERACGYFIF-SR-GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
HV R I SR G+ VRNL DL +QP +++VP V+E +Y+ +
Sbjct: 252 AHVLGRFVEIAIVCSRSGVLGHVPDVRNLVADLGSFQPTAVLAVPRVFEKIYNAADAK-- 309
Query: 314 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 373
++ AR+ V R + + AY+ EG ++ ++
Sbjct: 310 -ATGARQKVFRLAAKTAIAYSRALDTPEGPSRRLKAQRAAF------------------- 349
Query: 374 LHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 432
+++V+ ++S +G V SGGG L + FY GV V GYGLTE+ A
Sbjct: 350 -----DRIVFSTLRSVLGGQVTHVISGGGPLGERLGHFYRGAGVTVLEGYGLTETMGPCA 404
Query: 433 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 492
P +G+VG P+ +++ G + VRG GY NP AT +
Sbjct: 405 VNLPGATRIGTVGTPLPGCAVRL-----------DGDGEILVRGIGTFTGYHNNPEATAE 453
Query: 493 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 552
A DGWL TGDIG G L + GR K+ IV + G+NV P LE+
Sbjct: 454 AFTADGWLRTGDIGSF---------EGAEGFLRITGRKKELIVTAGGKNVAPAPLEDRLR 504
Query: 553 RSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L+ Q++V+G+++ GA++ D E
Sbjct: 505 GHPLVSQVLVVGENRPCVGALVTLDAE 531
>gi|343928139|ref|ZP_08767595.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343761939|dbj|GAA14521.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 612
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 263/548 (47%), Gaps = 73/548 (13%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A GL +GV + + + N + + D L GA+ + S+ +++ +++ ++E
Sbjct: 58 IAGGLAALGVGRGDTVGIMLTNRPEFHLVDTAALHLGAVPFSIYNTSAPDQIEYLFGNAE 117
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + E F I T + R +++ +++ D VE P E D
Sbjct: 118 NRIVITEQ-VFLPVI--TAANTGVERIVVVDDVADGAISLDDVERTP---PPEGFD---- 167
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
F+ S ++ + +D+AT +YTSGTTG PKGV +TH+N++ ++ +L + +
Sbjct: 168 ----FAAS--------WQAVEPEDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEKLD 215
Query: 243 AENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLV 300
D+ +S LP H+ +R + RGI++ R + L P + VP V
Sbjct: 216 VGFDDRSISYLPAAHIADRVSSHAANLMRGIQITTVPDPREIATALPEVHPTFFFGVPRV 275
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ + +GI+ ++ S+ V RAL +F A S A ID
Sbjct: 276 WQKIRAGIEAKVAEESSP---VKRALAGWAFGVGA-----------------STAQARID 315
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISK---AGVSGGGSLPMHIDLFYEAIGVK 417
+ ++ + H +A+KLV K+++A+G+ + AG SG ++P+ + F+ +G+
Sbjct: 316 GKGSGLLGGV---QHGIADKLVLHKVRAALGLDEVVFAG-SGAAAIPVEVLKFFLGLGIP 371
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
+ +G++E++ V P +G+VG PI E+++ D G + VRG
Sbjct: 372 ILEVWGMSETTGVSTMTTPDNLKIGTVGPPIRGMEVRLAD-----------DGELLVRGP 420
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
VM+GY P T + +D DGWL+TGDI I G V++++ R K+ I+
Sbjct: 421 VVMRGYRNQPEKTAETIDADGWLSTGDIAKI---------DDDGNVIIVD-RKKELIINE 470
Query: 538 TGENVEPLELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
+G+N+ P +E A SSLI Q+ IG + A++V D E V + AKRLS+ +AD +
Sbjct: 471 SGKNMSPTNIENAMKAASSLIGQVAAIGDSKPYVSALVVLDPEAVAVRAKRLSMPNADLA 530
Query: 597 ELSKEKTI 604
ELS I
Sbjct: 531 ELSTHPEI 538
>gi|238791159|ref|ZP_04634798.1| long-chain-fatty-acid--CoA ligase [Yersinia intermedia ATCC 29909]
gi|238729292|gb|EEQ20807.1| long-chain-fatty-acid--CoA ligase [Yersinia intermedia ATCC 29909]
Length = 650
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 270/570 (47%), Gaps = 85/570 (14%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ + + L +GV +E++ +F++NS W +AD +L ++V + ++S +
Sbjct: 92 QQVDTHVTQISAALLSLGVAIQERIGIFANNSMTWSLADLAILQLRGVSVPLYATNTSAQ 151
Query: 114 LLHIYNHSESVALAVENPEFFNRIA--ETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVF 171
++ N ++ L V F+ A + LC + A II+L
Sbjct: 152 AAYVLNDADVRILFVGGQTQFDVAATLKPLCPQLAQ--IIVL------------------ 191
Query: 172 SYDEIIDL-GRESRKAFSD----SNDARKHYKYETIGS---DDIATYVYTSGTTGNPKGV 223
D +DL G E + +D + ++H I S +D+ T +YTSGTTG PKGV
Sbjct: 192 --DPTVDLRGCEYAQHLADFEQQPDAVQQHLLTARIDSCDLNDLFTLIYTSGTTGEPKGV 249
Query: 224 MLTHKNLLHQIRSLYD---IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 280
ML ++N+ Q+ L+D + AE D LS LP HV+ERA +++ G + +Y +
Sbjct: 250 MLDYRNMAAQL-YLHDQRLTLTAE--DVSLSFLPLSHVFERAWSFYVMHTGAQNVYISNT 306
Query: 281 N-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 339
+ ++ + +P M +VP YE ++S I ++ + RR++ R +A +R
Sbjct: 307 DWVRPAMLAVKPTVMCAVPRFYEKVFSAINDKVALAKWHRRMLFR------WAVGCGERQ 360
Query: 340 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSG 399
++ L R QK + + ++ LA++LV K++ +G +
Sbjct: 361 FQS--LQRGQK----------------LSLLSGQMYKLADRLVLSKLRGVLGGRVRFLPA 402
Query: 400 GGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 458
G+ L +I LF++AIG+ ++ GYG+TE+ ++ GS+G P+ ++++
Sbjct: 403 AGARLDDNIILFFQAIGINIKYGYGMTETCATVSCWEEQDFRFGSIGKPLPGIDVRL--- 459
Query: 459 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 518
G++ ++VRG VM+GYF P T ++ EDGWL TGD G +
Sbjct: 460 --------GAENEIQVRGPIVMRGYFNKPQETAESFTEDGWLKTGDAGALDAQ------- 504
Query: 519 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 578
G L + R KD + S G+ + P +E + I Q+ +I ++ A+IVP
Sbjct: 505 ---GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQVAIIADTRKFVSALIVPCF 561
Query: 579 EEVLMAAKRLSIVHADASELSKEKTISLLY 608
E + A+ +++ + D EL + I L+
Sbjct: 562 ESLEEYARSINLKYHDRLELLRHSHIVSLF 591
>gi|456390675|gb|EMF56070.1| long-chain fatty-acid CoA ligase [Streptomyces bottropensis ATCC
25435]
Length = 625
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 157/577 (27%), Positives = 256/577 (44%), Gaps = 67/577 (11%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A GL +GV+PE++++L S W++ D G++ GA N ++++EE +I + S
Sbjct: 62 IAAGLVELGVQPEQRIALSSATRIEWILCDLGIMCAGAANTTVYPQTNAEESAYILSDSG 121
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
S L EN ++ E + ++++ + + ++ D V + DL +
Sbjct: 122 SRVLIAENAAQLDKAREKKAELPELAHVVVIDPEGADLSEDWVL--------SLADLEKR 173
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
A+ + N K I D +AT +YTSGTTG PKGV L H N + +++
Sbjct: 174 G-AAYLEKNPDLIKEKVAAITKDQLATLIYTSGTTGRPKGVRLPHDNWAYMAKAIGATGL 232
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKD----DLQRYQPHYMISV 297
E D LP HV G + + IE+ + TAV D +L +P YM +V
Sbjct: 233 LEPADVQYLWLPLAHV----MGKVLLAGHIEVGHITAVDGRVDKIIENLPVVRPTYMAAV 288
Query: 298 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 357
P ++E +Y+G+ + A+ + + ++ Y + + F T P L A
Sbjct: 289 PRIFEKVYNGVVGKARAGGPAKYKIFQWAAGVAREYAKVSQ--DNFRRTGTTSVPFGLEA 346
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 416
H +A+ LVYKK++ A G +A VSG +L I F+ G+
Sbjct: 347 ----------------KHKVADALVYKKLREAFGGRLRACVSGSVALAPEIGFFFAGAGI 390
Query: 417 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 476
+ GYGLTESS G+VG P+ TE++I D G + +RG
Sbjct: 391 PILEGYGLTESSAASFLNPGEAFRTGTVGKPLPGTEVRIAD-----------DGEILLRG 439
Query: 477 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 536
+M+GY P T++ L+ DGW +TGDIG ++P G L + R KD
Sbjct: 440 PGIMEGYHGLPEKTEEVLEADGWFHTGDIGELSPD----------GYLRITDRKKDLFKT 489
Query: 537 STGENVEPLELE-EAALRSSLIRQIVVIGQDQRRPGAIIVPDK--------EEVLMAAKR 587
S G+ + P E+E + ++VIG D+ A+I D+ E L
Sbjct: 490 SGGKYIAPTEIEGQFKALCPFTSNVMVIGADRNFCTALIALDELSLQGWAAENGLAGKSY 549
Query: 588 LSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP 624
I+ A A+ E ++ L L++W + F++ P
Sbjct: 550 EEIISAPATVEMIEGHVAQLNEGLQRWQTIKKFRLLP 586
>gi|25028751|ref|NP_738805.1| long-chain-fatty-acid--CoA ligase [Corynebacterium efficiens
YS-314]
gi|23494037|dbj|BAC19005.1| putative long-chain-fatty-acid--CoA ligase [Corynebacterium
efficiens YS-314]
Length = 682
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 252/531 (47%), Gaps = 72/531 (13%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHI 117
E+ A+G+ GV+ ++++L +D W V D + A GA++V S SS ++ I
Sbjct: 125 NEVFAVAKGIIATGVEQGDRVALLADTRYEWSVLDYAIWAAGAVSVPIYSSSSLSQVQWI 184
Query: 118 YNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEII 177
S +V E P+ + + + ++ + K S+ + EI + D +
Sbjct: 185 IEDSGAVLAITETPDHTDLMKHLVLTEDGTPAL-----KGSTSKLRRILEINSSALDTLR 239
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
GRE S+D + + E S D+A+ VYTSGTTG PKG LTH N L ++R+L
Sbjct: 240 FEGREL------SDDLVRE-RIEATRSADLASLVYTSGTTGRPKGCELTHHNWLAEVRAL 292
Query: 238 YD------IVPAENGDKFLSMLPPWHVYERACGY-FIFSRGIELMYTAVRNLKDDLQRYQ 290
VP G + L+ LP HV RA F + ++ L +LQR +
Sbjct: 293 LTHPIGAIAVP---GSRVLTFLPLAHVLARAVSLAFTIGGATQSHWSDFSTLALELQRAR 349
Query: 291 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI-RISFAYTAFKRIYEGFCLTRNQ 349
P++++ VP V+E ++ T++A V AL R A + R + +
Sbjct: 350 PNFILGVPRVFEK----VRNSAATNAADGGPVKAALFARAEKAAIDYSRAQD------TE 399
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 408
+ PS R++ A H + ++LVY KI++A+G S + V+GG ++ +
Sbjct: 400 EGPS-----------RVLAAA----HKVFDRLVYAKIRAAVGNSVQYAVTGGSAMSHDLL 444
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
FY IG+ + GYGLTE++ AA +G+VG P+ I+I D
Sbjct: 445 HFYRGIGIPIYEGYGLTETA-AAAAIDFEDQKIGTVGKPLPGMTIRIND----------- 492
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
+G + ++G + +GY+ NP AT +++ DGW NTGD+G + G LV+ G
Sbjct: 493 QGEILLKGQMLFRGYWNNPKATAESI-VDGWFNTGDLGELL----------DSGHLVITG 541
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
R KD IV + G+NV P LE+ LI Q +V+G + G ++ D +
Sbjct: 542 RKKDLIVTAGGKNVSPGPLEDIIRAHPLISQAMVVGDGKPFVGLLVTLDPD 592
>gi|409098435|ref|ZP_11218459.1| AMP-dependent synthetase and ligase [Pedobacter agri PB92]
Length = 591
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 153/578 (26%), Positives = 254/578 (43%), Gaps = 95/578 (16%)
Query: 45 NHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVV 104
N+ FC + + + GL G++ ++++ S N W +AD GA +
Sbjct: 34 NYSTEQFCAT-----VDHLSRGLIKHGIQKGGRVAVMSHNRPEWNIADFAANQIGAYQIP 88
Query: 105 RGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDI 164
+ ++ I +E + V + + + +I + ++ P
Sbjct: 89 LYPTLAEHDIQFILKDAEISIIFVSDLDLYKKIKPCV----------------DTINP-- 130
Query: 165 VEEIPVFSYDEI---------IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
I +FS+ +I I+ G+ S+ D ++ + +DI T +YTSG
Sbjct: 131 --AIKIFSFSDIEGVTCWETLIEDGKNSQDINLDDYRSK-------VEPEDILTLIYTSG 181
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 275
TTG PKGVMLTH NL+ + ++P + +K LS LP H++ER Y +
Sbjct: 182 TTGTPKGVMLTHDNLVANFVNSSVVMP-DGVNKSLSFLPLSHIFERMIIYLYLFNKTSIY 240
Query: 276 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 334
Y ++ + D+Q +P+ +VP + E +Y I ++ + + +R + + ++ YT
Sbjct: 241 YAESMDTIVADIQHVKPNAFSTVPRLLEKVYDKIMEKGKSLTGIKRGIFFWSVALAEKYT 300
Query: 335 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK 394
+ F L +A KLV+KK Q A+G
Sbjct: 301 TDAGAWYNFKLG------------------------------IARKLVFKKWQEALGGEI 330
Query: 395 AG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 453
VSGG +L + + A G+ V GYGLTE+SPVI + G+VG I E+
Sbjct: 331 VVIVSGGAALNPRLARIFWAAGMPVFEGYGLTETSPVITVNHFGGTMFGTVGEVIKGVEV 390
Query: 454 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 513
KI A+ EVL RG QVM+GY+ P TK+A+D +GW +TGDIG +
Sbjct: 391 KI--AQDGEVL---------TRGHQVMKGYYNRPDLTKEAIDAEGWFHTGDIGELID--- 436
Query: 514 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 573
G L + R K+ + G+ V P LE S I QI+V+G++++ P A+
Sbjct: 437 -------GRFLKITDRKKEMFKTAGGKYVAPQILENKYKESIFIEQIMVLGENRKFPSAL 489
Query: 574 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 611
IVP+ E + A + I E+ K + + + E+
Sbjct: 490 IVPNFETLKTWAAKKGINFTTNEEIIKNEQVLAKFNEI 527
>gi|269955922|ref|YP_003325711.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304603|gb|ACZ30153.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 606
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 235/531 (44%), Gaps = 79/531 (14%)
Query: 56 LEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELL 115
+ +++ A GL GV+ +++++ S W + D + A G + V S+ +++
Sbjct: 55 FDADVVSVARGLVARGVQVGDRIAIMSRTRYEWTLLDYAIWAVGGVPVPVYETSAPDQVQ 114
Query: 116 HIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDE 175
I S A RF ++ + V + +++P
Sbjct: 115 WILEDS------------------------ACRFAVVETSAHAGVVDAVRKDLPTLEDVL 150
Query: 176 IIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ID G R A + + + + + D+AT +YTSG+TG PKG LTH N H
Sbjct: 151 VIDSGALDALRTAGAAVDTQEVADRRAAVVAADLATIIYTSGSTGRPKGAELTHGNFAHV 210
Query: 234 IRSLYDIVPA---ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 289
+ D++P G + L LP HV+ R S L + V+NL DL +
Sbjct: 211 SLNAADVLPEVIDHEGARTLLFLPIAHVFARLIQVATLSANTVLGHAPDVKNLVADLGSF 270
Query: 290 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 349
QP ++++VP V+E +Y+ +++ S R++ + + G +R Q
Sbjct: 271 QPTFLLAVPRVFEKVYNSAEQKASASKLKRQIF-------------YWAVRTGIAASRAQ 317
Query: 350 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHID 408
S + A L H LA+KLV K++ A+G VSGG L +
Sbjct: 318 DTGS-------------VPAALAFQHRLADKLVLSKLREAMGGHVVHAVSGGAPLGERLG 364
Query: 409 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 468
F+ +GV V GYGLTE++ A P +G+VG P+ T IKI D
Sbjct: 365 HFFRGVGVTVLEGYGLTETTAPAAVNLPRSVAIGTVGPPLPGTSIKIDD----------- 413
Query: 469 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 528
G + ++G V +GY P T + L +DGW TGD+G + S+GR R + G
Sbjct: 414 DGEILIKGPHVFRGYRNQPELTAEVL-QDGWFRTGDLGTL---DSQGRLR-------ITG 462
Query: 529 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
R K+ IV + G+NV P LE+ L+ Q+VV+G + GA++ D E
Sbjct: 463 RKKEIIVTAGGKNVAPALLEDRLRSHPLVSQVVVVGDQRPFIGALVTLDAE 513
>gi|238784583|ref|ZP_04628590.1| long-chain-fatty-acid--CoA ligase [Yersinia bercovieri ATCC 43970]
gi|238714549|gb|EEQ06554.1| long-chain-fatty-acid--CoA ligase [Yersinia bercovieri ATCC 43970]
Length = 589
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/564 (25%), Positives = 262/564 (46%), Gaps = 75/564 (13%)
Query: 55 KLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEEL 114
+++Q + + L + +E++ +F++NS W +AD +L ++V + +++ +
Sbjct: 32 QVDQHVTQISTALLSLDAAIQERIGIFANNSMAWSLADLAILQLRGVSVPLYATNTTNQA 91
Query: 115 LHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD 174
++ N ++ L V F+ +A TL + P + + + D
Sbjct: 92 AYVLNDADVRILFVGGQPQFD-VAITL----------------KPMCPQLTQ---IIVLD 131
Query: 175 EIIDL-GRESRKAFSD----SNDARKHYKYETIGS---DDIATYVYTSGTTGNPKGVMLT 226
+DL G E + +D + ++H I S DD+ T +YTSGTTG PKGVML
Sbjct: 132 PAVDLRGCEYAQHLTDFEQQPDAVQQHLLTTRIDSCDLDDLFTLIYTSGTTGEPKGVMLD 191
Query: 227 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDD 285
++N+ Q+ + D LS LP HV+ERA +++ G + +Y + + ++
Sbjct: 192 YRNMAAQLYLHDQRLTLTVDDVSLSFLPLSHVFERAWSFYVMHTGAQNVYISDTDWVRPA 251
Query: 286 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 345
+Q +P M +VP YE ++S I ++ + RR++ R +A +R ++
Sbjct: 252 MQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHRRMLFR------WAVGCGERKFQNL-- 303
Query: 346 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LP 404
Q +L+ L ++ LA++LV K++ +G + G+ L
Sbjct: 304 -----QSGQTASLLSGL-----------MYKLADRLVLSKLRGLLGGKVRFLPAAGARLD 347
Query: 405 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 464
+I LF++AIG+ ++ GYG+TE+ ++ GS+G P+ ++++
Sbjct: 348 DNIILFFQAIGINIKYGYGMTETCATVSCWEERNFCFGSIGKPLPGIDVRL--------- 398
Query: 465 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 524
G + ++VRG VM+GYF P T ++ EDGWL TGD G + G L
Sbjct: 399 --GVENEIQVRGPIVMRGYFNKPQETAESFTEDGWLKTGDAGALDAK----------GNL 446
Query: 525 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 584
+ R KD + S G+ + P +E + I QI +I ++ A+IVP E +
Sbjct: 447 FITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEY 506
Query: 585 AKRLSIVHADASELSKEKTISLLY 608
A+ +++ + D EL + I L+
Sbjct: 507 ARSINLKYHDRLELLRHSHIVSLF 530
>gi|29348959|ref|NP_812462.1| long-chain-fatty-acid--CoA ligase [Bacteroides thetaiotaomicron
VPI-5482]
gi|298386670|ref|ZP_06996225.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 1_1_14]
gi|383124447|ref|ZP_09945111.1| hypothetical protein BSIG_3525 [Bacteroides sp. 1_1_6]
gi|29340866|gb|AAO78656.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides
thetaiotaomicron VPI-5482]
gi|251839056|gb|EES67140.1| hypothetical protein BSIG_3525 [Bacteroides sp. 1_1_6]
gi|298260344|gb|EFI03213.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 1_1_14]
Length = 601
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 260/581 (44%), Gaps = 68/581 (11%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A +GV+ +E + +FS N W D G A + + + SS + +I N ++
Sbjct: 49 ANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRGVTIPFYATSSPAQAQYIINDAQI 108
Query: 124 VALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE- 182
L V ++ ++++ +I+ SV D ++ +DE + +G
Sbjct: 109 RYLFVGEQYQYDSAFSIFGFCSSLQQLIIF---DRSVVKD-PRDVSSIYFDEFMAMGEGL 164
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
+ AR Y DD+A +YTSGTTG PKGVML H L Q + +D
Sbjct: 165 PHNEVVEERTARASY-------DDLANILYTSGTTGEPKGVMLHHSCYLEQFHT-HDERL 216
Query: 243 AENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPL 299
DK +SM LP HV+E+A Y +G+++ + +++ ++ +P M SVP
Sbjct: 217 TTMTDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPR 276
Query: 300 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 359
+E +Y+G+Q++I ++ ++ + I++ RI+ R K P + L
Sbjct: 277 FWEKVYAGVQEKINETTGLKKALMLDAIKVG-------RIH-NLDYLRLGKTPPVMNQL- 327
Query: 360 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVK 417
+ EK +Y ++ IGI + G ++P I+ F ++G+
Sbjct: 328 --------------KYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGIN 373
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
+ VGYGLTES+ ++ P +GSVG + E+KI E NE+L +RG
Sbjct: 374 MVVGYGLTESTATVSCTLPVGYDIGSVGVVLPGLEVKI--GEDNEIL---------LRGK 422
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
+ +GY+K AT A+D DGW +TGD G+ G L L R KD S
Sbjct: 423 SITKGYYKKAEATAAAIDADGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTS 471
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
G+ + P LE + I QI +I ++ A+IVP V AK I + D +E
Sbjct: 472 NGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKDMAE 531
Query: 598 LSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 634
L + I L+ R T + F QI ++ EPF++
Sbjct: 532 LLQHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|255535994|ref|YP_003096365.1| Long-chain-fatty-acid--CoA ligase [Flavobacteriaceae bacterium
3519-10]
gi|255342190|gb|ACU08303.1| Long-chain-fatty-acid--CoA ligase [Flavobacteriaceae bacterium
3519-10]
Length = 587
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 251/559 (44%), Gaps = 76/559 (13%)
Query: 60 ILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYN 119
I A LR G+ +K+++++DNS W+V D +++ GA+ V S ++ E+ +I N
Sbjct: 40 IFKTANALRDAGISGHDKVAIYADNSAEWIVFDLAIMSLGAVTVPIYSTNNGEQAEYIIN 99
Query: 120 HSESVALAVENPEFFNRIAETLCSKAAMRFII----LLWGKKSSVAPDIVEEIPVFSYDE 175
SE+ + V N E ++ E L +++ I+ +W KK + +
Sbjct: 100 DSEAKLILVGNQEQYDAAYEILEKNGSLQQIVAAKKAIWIKKDRSH----------YFQD 149
Query: 176 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 235
I G E+ + N DD+AT +YTSGTTG PKGVMLTH N I
Sbjct: 150 FIKDGDETFEIVKREN-------------DDLATIIYTSGTTGIPKGVMLTHGNFHQCIT 196
Query: 236 SLYDIVPAEN--GDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPH 292
+ +D +N + L+ LP HV+ER+ G ++ + + + L +P
Sbjct: 197 AHFDFFKFKNFENETSLAFLPLTHVFERSWTLLSLFGGAKVYFLENTKLIAHALTEVKPT 256
Query: 293 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 352
M +VP Y+ +Y+G+Q+ + SA ++ + + + KR+ +Q+ P
Sbjct: 257 MMCAVPRFYQKIYAGVQEMVENGSATKKKIFNWAVEVGTETGEHKRL--------DQQIP 308
Query: 353 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFY 411
+L + +A+ LV+ KI+ +G + GG S+ + F+
Sbjct: 309 ----------------LVLKLKNNVADLLVFNKIKKKMGGRLWFMPCGGASVSPEVTRFF 352
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 471
+A+GV + VGYGLTE++ + A GS G P+ T++KI E +E+L
Sbjct: 353 DALGVHMTVGYGLTETTATLTAFPFKHYEHGSAGIPLGDTQLKI--GENDEIL------- 403
Query: 472 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 531
+GS +M GY+ P T +DGW TGD G G L + R K
Sbjct: 404 --AKGSGIMNGYYNLPDETSAVFTDDGWFRTGDAGRF----------DINGNLFITDRIK 451
Query: 532 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 591
D + S G+ V P +E ++ I Q +++ + + A+I+P+ E + R+++
Sbjct: 452 DLMKTSNGKYVTPQPIENLLSNNTYIAQAMIVAEGKPFVTALIIPNFEALKEQLTRMNLP 511
Query: 592 HADASELSKEKTISLLYGE 610
EL I Y E
Sbjct: 512 FTSWQELVNSDKIKEFYRE 530
>gi|29827645|ref|NP_822279.1| acyl-CoA synthetase, long-chain fatty acid:CoA ligase [Streptomyces
avermitilis MA-4680]
gi|29604745|dbj|BAC68814.1| putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase
[Streptomyces avermitilis MA-4680]
Length = 641
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 168/612 (27%), Positives = 264/612 (43%), Gaps = 86/612 (14%)
Query: 40 RISRRNH----RFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGM 95
+I+RR+H + ++L E++D A GL G++P ++++ S W V +
Sbjct: 34 QIARRSHDSPGTWTQVSAAQLRDEVVDLARGLIASGIRPGNRVAIMSRTRYEWTVLSCAL 93
Query: 96 LATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWG 155
+ GA V SS E++ I ++ V + VE+ + + +R + W
Sbjct: 94 WSLGAEIVPLYPNSSHEQVAWILKDADCVGVLVEDEQGVMTVGSVCAGLPRLRHV---WQ 150
Query: 156 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 215
S S DE+++ GR A DS + D A YTSG
Sbjct: 151 LDSG------------SLDELVERGRPVPAATVDS-------LRRIVLPDSTAVIAYTSG 191
Query: 216 TTGNPKGVMLTHKNLLHQIRSLYD------IVPAENGDKFLSMLPPWHVYERACGYFIFS 269
T+G+P+G L+H++L +L D P E L+ LP HVY
Sbjct: 192 TSGHPRGCALSHRSLASTCDTLLDGWRHTAASPGEQ-PAVLAFLPFSHVYGLMVQGLCLR 250
Query: 270 RGIELMYTA---VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 326
G+ + + +L + ++P Y+ +VP V+E +Y + F ++A R
Sbjct: 251 GGLLMGHEPDLRAESLAAAFRSFRPTYLYAVPSVFEKIY-----KSFLTAAERTGRGTLF 305
Query: 327 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 386
R + + E L P + + L H L E+ VY+K+
Sbjct: 306 ERAARTAQDYAEAAEQQRLG-TGPGPGFDLKL---------------QHALYERAVYRKL 349
Query: 387 QSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 445
+ ++G G VSGG L + LFY IG+ V GYGLTE+S I A+ G+VG
Sbjct: 350 RDSLGGRICGAVSGGSPLNRELTLFYAGIGIMVHDGYGLTETSGGITAQPVGREKFGTVG 409
Query: 446 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 505
P+ T+I++ AE E+L VRG V QGY + T+ +L DGWL TGD+
Sbjct: 410 RPLPGTDIQV--AEDGEIL---------VRGPSVFQGYVNDIPGTRASL-RDGWLATGDL 457
Query: 506 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 565
G + G L + GR KDTIV S+G++V P LEE LI Q V++G+
Sbjct: 458 GRLDSE----------GYLSITGRKKDTIVTSSGKSVAPSVLEERLRVHPLIHQAVIVGE 507
Query: 566 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----- 620
++ GA+I D + L + + ADA + ++L R + SF
Sbjct: 508 NRPCVGALITLDP-DYLPHWRTMVAAQADAPSREAREQNAVLQEVTRAVAAANSFVSRSE 566
Query: 621 QIGPIHVVDEPF 632
I ++ EPF
Sbjct: 567 SIRVFRILPEPF 578
>gi|226939644|ref|YP_002794717.1| long chain fatty-acid CoA ligase [Laribacter hongkongensis HLHK9]
gi|226714570|gb|ACO73708.1| Probable long chain fatty-acid CoA ligase [Laribacter hongkongensis
HLHK9]
Length = 588
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 165/633 (26%), Positives = 293/633 (46%), Gaps = 96/633 (15%)
Query: 17 LDYHRHGFRVFTR-NCVDAVATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPE 75
D+ RH + + +C+ A R+ ++ F ++ + + ++GL +G++
Sbjct: 7 FDFLRHQLANYPKADCLSA--------RKGKDWQRFNTQEVLEIVDRLSQGLLKLGIRRG 58
Query: 76 EKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFN 135
+ ++L ++N W D + GA++V + +++ I H+E + LA
Sbjct: 59 DTVALIANNCPEWHFIDFALQQIGAVSVPLYPTLTLDDMRFIVQHAE-IRLAFAG----- 112
Query: 136 RIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG--RESRKAFSDSNDA 193
KA L+GK + PV++++ + E A D N
Sbjct: 113 -------DKA-------LYGKLKDATQGM--NCPVYTFENVEGAANWEELLMAGGDGNPE 156
Query: 194 RKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI----RSLYDIVPAENGDKF 249
+++ DD+ T +YTSGTTG PKGVML+H+N++ Q+ R + +VP + +
Sbjct: 157 VLAALRDSVRPDDLLTIIYTSGTTGRPKGVMLSHRNVVSQVEAVCRFVKPLVPGQW--RT 214
Query: 250 LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGI 308
+S LP HV+ER YF S G+ + Y + + LQ P +VP + E +Y
Sbjct: 215 VSFLPLSHVFERTACYFYISAGVSIYYAKSMDVIAASLQDVHPQMFTTVPRLLEKVY--- 271
Query: 309 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 368
++ + S + V R L Y A R E F P L AL
Sbjct: 272 -EKFVSKSHELKGVTRKL------YEAALRFAESF---EPNTPPKGLAAL---------- 311
Query: 369 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 427
+ L +KLVY K ++A+G + V G +L + + A G+ V GYG+TES
Sbjct: 312 -----QYKLYDKLVYSKWRAAMGNEVQVIVVGSAALQPRLARVFWAAGIMVTEGYGMTES 366
Query: 428 SPVIAARRPTCNV--LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 485
+PV+ + + +G+VG P+++ EI+I AE E+L RG VM GY+K
Sbjct: 367 APVLTGNQLDADQVDIGTVGIPLDNVEIRI--AEDGEIL---------ARGPNVMMGYYK 415
Query: 486 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 545
+ T++ L +DGWL+TGD+G I ++RG R + R K+ S G+ V P
Sbjct: 416 DEEMTRETL-KDGWLHTGDVGEI---NARGNLR-------ITDRKKEMFKTSCGKYVAPQ 464
Query: 546 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI 604
+E S+ I Q++V+G ++ A++VP ++V + + + ++A S K
Sbjct: 465 VIENKLKESAYIDQVMVVGDGRKYASALVVPLFDQVRAWCSQQGLQIKSEAEMASHPKVR 524
Query: 605 SLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 635
L+ E++++ Q+ + +V+ P++++
Sbjct: 525 ELIEHEVKRFNRLFGSWEQVKKVALVERPWSID 557
>gi|40807491|ref|NP_001986.2| long-chain-fatty-acid--CoA ligase 1 [Homo sapiens]
gi|417241|sp|P33121.1|ACSL1_HUMAN RecName: Full=Long-chain-fatty-acid--CoA ligase 1; AltName:
Full=Acyl-CoA synthetase 1; Short=ACS1; AltName:
Full=Long-chain acyl-CoA synthetase 1; Short=LACS 1;
AltName: Full=Long-chain acyl-CoA synthetase 2;
Short=LACS 2; AltName: Full=Long-chain fatty acid-CoA
ligase 2; AltName: Full=Palmitoyl-CoA ligase 1; AltName:
Full=Palmitoyl-CoA ligase 2
gi|219900|dbj|BAA00931.1| long-chain acyl-CoA synthetase [Homo sapiens]
gi|29476795|gb|AAH50073.1| ACSL1 protein [Homo sapiens]
gi|119625067|gb|EAX04662.1| acyl-CoA synthetase long-chain family member 1, isoform CRA_a [Homo
sapiens]
gi|119625068|gb|EAX04663.1| acyl-CoA synthetase long-chain family member 1, isoform CRA_a [Homo
sapiens]
gi|119625070|gb|EAX04665.1| acyl-CoA synthetase long-chain family member 1, isoform CRA_a [Homo
sapiens]
Length = 698
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 244/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+++ + ++VE + V S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVVM----DAYGSELVERGQRCGVEVTSMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ + V
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATENTVN 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 310 PCPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++ E
Sbjct: 565 GEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWAQKRGF-EGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|227495395|ref|ZP_03925711.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
gi|226830942|gb|EEH63325.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
Length = 610
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/539 (27%), Positives = 243/539 (45%), Gaps = 81/539 (15%)
Query: 48 FRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGS 107
+R +L E+ + A+GL +G+K +K+S+ + W + D L+ G I V
Sbjct: 50 WRNISAEELLNEVNEVAKGLLAMGIKKGDKISIMAATCTEWSILDLAALSLGIIVVPIYE 109
Query: 108 RSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE 167
S ++ I N ++ V + +N +A + K++ P V+E
Sbjct: 110 SDSGAQIEWITNDAQPVLVVADN-------------RARAELV------KATAGPS-VKE 149
Query: 168 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 227
+ F I R+ + + +D + + D+AT +YTSGTTG PKGV LTH
Sbjct: 150 VLYFEDGAI----RKIQARGMNISDPELAHARADLTYHDVATIIYTSGTTGMPKGVTLTH 205
Query: 228 KNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERACGYFIFS-RGIELMYTAVRNLK 283
+N + I + VP +FL LP HV R + I + GI + +NL
Sbjct: 206 RNFVETIYGCQEAVPEILLSKDTRFLLFLPLAHVLARFVQFLILAGEGIYAHTSDTKNLL 265
Query: 284 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF--KRIYE 341
DL+ +QP ++ VP V E +Y+ + + +R + R + S Y+ R
Sbjct: 266 GDLKTFQPSLLLLVPRVLEKIYNSAEAK--AGKGIKRKIFRWAAKTSIEYSKGLDSRFGP 323
Query: 342 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 400
F R K LA KLV KI+ A+G + + VSGG
Sbjct: 324 SFAQRRRLK--------------------------LAHKLVLHKIREALGPNMRYIVSGG 357
Query: 401 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 460
L + F+ +G+ + GYGL+E++ + R + +G+VG+ I IK+ D
Sbjct: 358 APLSPTLGHFFRGLGLDILEGYGLSETTGPLFITRLSSPKMGTVGNIIPGNRIKLSD--- 414
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
+G + V+GS V GY+ N +AT +A E+ W +TGD+G + +GR
Sbjct: 415 --------EGEILVQGSTVFAGYYNNEAATTEAFTEN-WFHTGDVGSV---DRKGR---- 458
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
L + GR+KD +V + G+NV P LEE+ + L+ +VV+G + AI+ D E
Sbjct: 459 ---LSITGRSKDLLVTAGGKNVAPAALEESLVTHPLVSHVVVVGDQKPYISAIVTLDAE 514
>gi|424039094|ref|ZP_17777540.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
gi|408893373|gb|EKM30590.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
Length = 525
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 248/540 (45%), Gaps = 61/540 (11%)
Query: 58 QEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINV-VRGSRSSSEELLH 116
Q++ + L G+ ++K+ +FS+N +W +AD L + V + + ++++
Sbjct: 43 QQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYI 102
Query: 117 IYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEI 176
I N V E P+F + + I+ + S D+ + ++ +
Sbjct: 103 IDNADVKVLFVGEQPQF-DAAVSIFDECKQLELIVAM-----SDDIDLGDHAFAMTWKDF 156
Query: 177 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 236
+ G S +A ++ + E +D+ T +YTSGTTG PKGVML + N+ Q+
Sbjct: 157 VAKGDVSHQAELET-------RLEHAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEG 209
Query: 237 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMI 295
+ + D L LP HV+ERA +++ +G Y ++D L +P M
Sbjct: 210 HDERLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMS 269
Query: 296 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 355
+VP YE ++S I +++ + R+++ + + A C N+K PS +
Sbjct: 270 AVPRFYEKIFSAIHEKVSRAPFHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM 320
Query: 356 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAI 414
L + LA+KLV K+++ +G + GG L I F+ AI
Sbjct: 321 ---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAI 365
Query: 415 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 474
G+ V++GYG+TE++ ++ C S+G + ++KI E NE+L V
Sbjct: 366 GINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------V 414
Query: 475 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 534
RG VM+GY+K P T++ DE G+L TGD G+I + G L + R K+ +
Sbjct: 415 RGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELM 464
Query: 535 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
S G+ + P +E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 465 KTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
>gi|345878115|ref|ZP_08829841.1| tRNA (guanine-N(7)-)-methyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344224857|gb|EGV51234.1| tRNA (guanine-N(7)-)-methyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 604
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 260/525 (49%), Gaps = 64/525 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ +EI + + L G++P +++++ N W++ DQ L+ G + V + ++
Sbjct: 51 AEMGREIARWRQALLQEGLEPGDRVAIQLRNCPEWVMFDQAALSLGLVTVPLYTDDRADA 110
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I + L V++ + R+ L ++ +++L G E++P S
Sbjct: 111 VAYILQDAVVKLLLVQDAGRWRRMVSALQGLETLQRVVVLEG---------AEQLPESS- 160
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
L + R A + ++ + + +A+ VYTSGTTG PKGVML+H N+L
Sbjct: 161 -----LHQRVRAAGTWLPESGPALQPRSADPHSLASIVYTSGTTGRPKGVMLSHWNMLSV 215
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQP 291
+ +V D FLS LP H ER GY++ G + Y +V L +D+Q +P
Sbjct: 216 AHASLTVVDCYRQDLFLSFLPLSHTLERTAGYYLPLMAGATVAYARSVTQLAEDMQCIRP 275
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+I+VP ++E +Y+ +Q+Q+ R ++AR L R++ ++ GF +Q
Sbjct: 276 TVIIAVPRIFERIYARLQEQL----KQRSLLARGLFRLT--------LHCGFIQFEHQMG 323
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFY 411
W+ + + L+A+K++ + G + +SGG +L + F
Sbjct: 324 RQG--------WSPKLLLMPLLRRLVADKVLAR----LGGRLRGAISGGAALSPDVSRFM 371
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++G+ + GYGLTE+SPVI+ P NV + SVG P+ E++I E +E+L
Sbjct: 372 LSLGLPILQGYGLTETSPVISV-NPMDNVKVDSVGVPLRGVEVRI--GENDELL------ 422
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
VK G M GY+ N +AT + +D +GWL+TGD R +R + + GR
Sbjct: 423 -VKTPGR--MLGYWNNHAATAEMIDAEGWLHTGD-------QVRIDEQRH---IYITGRL 469
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
KD +VLS GE + P ++E A LI Q++V+G+ + A++V
Sbjct: 470 KDILVLSNGEKIPPSDMEMAIALDPLIEQVLVVGEGKPYLAALLV 514
>gi|158259057|dbj|BAF85487.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 244/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+++ + ++VE + V S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVVM----DAYGSELVERGHRCGVEVTSMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ + V
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATENTVN 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 310 PCPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++ E
Sbjct: 565 GEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWAQKRGF-EGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|384245204|gb|EIE18699.1| long chain acyl-CoA synthetase 4 [Coccomyxa subellipsoidea C-169]
Length = 678
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 251/545 (46%), Gaps = 72/545 (13%)
Query: 64 AEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSES 123
A G+ +G+K ++ ++ NS W++A Q A V S+ + +I NH+E
Sbjct: 94 ASGIMALGLKQHGRVGVYGINSPEWMMAMQACNRQSAYCVPLYDTLGSDAVRYIINHAEV 153
Query: 124 V---ALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEE---IPVFSYDEII 177
A +++ P +AET +A ++ WG+ ++A +EE +S+ E++
Sbjct: 154 TVVFADSLKMPALIQPLAETKGQVSA----VVYWGECDTLAKVSIEESGLTKCYSWSELL 209
Query: 178 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 237
++GR+S +D+ T +YTSGTTGNPKGVMLTH NLL +
Sbjct: 210 EMGRKSPSPAIPPK------------PEDLCTIMYTSGTTGNPKGVMLTHANLLSVVAGQ 257
Query: 238 YDIVPAENG---------DKFLSMLPPWHVYERACGYFIFSRGIELMY--TAVRNLKDDL 286
+ G D +S LP H+++RA + G + Y ++ + DDL
Sbjct: 258 LGAINQVGGRYGQRFTQEDVMISYLPLAHIFDRALEEMFLANGARIGYWRGSIEGVIDDL 317
Query: 287 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 346
Q +P I VP V++ +Y G+ ++ ++ RR + A + + I G+ T
Sbjct: 318 QALRPTLFIGVPRVFDKVYDGVFARLKDATCLRRAIFHAAF-----WHKQRHINLGYRWT 372
Query: 347 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 405
Y W A LA+ LV+ K+++ +G + SGG L
Sbjct: 373 ERPINLGY-----RWTEASP----------LADALVFDKVRAKLGGRVRLVCSGGAPLAR 417
Query: 406 HIDLFYE-AIGVKVQVGYGLTES--SPVIAARRPTCNVLGSVGHPINHTEIKI--VDAET 460
H++ F + A+ GYGLTE+ S IA P N G+VG P+ ++ V
Sbjct: 418 HVEEFLKTAMCAPCCQGYGLTETCGSSFIALPEPMFN--GTVGGPLPLLTFRLEAVPEMG 475
Query: 461 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 520
+ L +G + ++G V QGY+K+ T + LD+DGW +TGDIG + P
Sbjct: 476 YDPLADPPRGEIIIKGPVVFQGYYKDQEKTDEVLDKDGWFHTGDIGELTPI--------- 526
Query: 521 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKE 579
G L + R KD LS GE + P +E A ++S ++Q+ + G + A++VP +
Sbjct: 527 -GSLKIIDRKKDLFKLSQGEYIAPERIEGALKKASAVQQVYIHGNSFESSLVAVVVPTEA 585
Query: 580 EVLMA 584
E+ A
Sbjct: 586 ELRSA 590
>gi|296088349|emb|CBI36794.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 154/559 (27%), Positives = 243/559 (43%), Gaps = 71/559 (12%)
Query: 35 VATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQG 94
+ TR+R ++ + L GLR G+ + L+ N WL+ D
Sbjct: 97 LGTRVRGDGTVGEYKWMTYGEAGTVRLAIGSGLRHHGLLEGACIGLYFINRPEWLIVDHA 156
Query: 95 MLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLW 154
A I+V + + +I NH++ A+ P N + L ++R ++++
Sbjct: 157 CSAYSYISVPLYDTLGPDAVKYIVNHADVQAIFCL-PHTLNTLLSFLSEIPSVRLVVVVG 215
Query: 155 GKKSSVAPDIVE--EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
G V P + ++ + S+ +++ G + F +DIAT Y
Sbjct: 216 GIDEHV-PSLPSNSQVKLISFAKLLSQGHSDLQPFCPPK------------PEDIATICY 262
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGI 272
TSGTTG PKGV+LTH NL+ I + D ++S LP H+YERA + G
Sbjct: 263 TSGTTGTPKGVILTHGNLIATIAGASLTLKFCPSDIYISYLPLAHIYERANQVLLAYYGG 322
Query: 273 ELMYTAVRNLK--DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
+ + NLK DDL +P SVP +Y +YSGI + TS R+ + A
Sbjct: 323 AVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRIYSGIMNAVQTSGVLRKTLFNA----- 377
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
AY + K++ + + PS +W ++LV+ KI+ +
Sbjct: 378 -AYNSKKQV------IISGRNPS----------------PMW------DRLVFSKIKGML 408
Query: 391 GISKAGVSGGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
G + G G+ P+ +D G +V GYG+TE+S +I+ N+ G VG P
Sbjct: 409 G-GRVHFMGSGASPLSPDVMDFLRVCFGCQVIEGYGMTETSCLISCMDKGDNLSGHVGSP 467
Query: 448 INHTEIKIVDAE----TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 503
EIK+VD T+E P +G + VRG + QGY+K+ TK+ +D DGWL+TG
Sbjct: 468 NPACEIKLVDVPEMNYTSEDQPY-PRGEICVRGPVLFQGYYKDEVQTKEVIDGDGWLHTG 526
Query: 504 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 563
DIG P GG L + R K+ L+ GE + P ++E + + Q +
Sbjct: 527 DIGLWLP----------GGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVSQCFIY 576
Query: 564 GQDQRRPGAIIVPDKEEVL 582
G IV +VL
Sbjct: 577 GDSLNSCLVAIVSVDPDVL 595
>gi|345315431|ref|XP_003429626.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 [Ornithorhynchus
anatinus]
Length = 674
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 240/547 (43%), Gaps = 80/547 (14%)
Query: 75 EEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFF 134
E+ + +F+ N W+V +QG A + V +E + I +E + + PE
Sbjct: 123 EQYVGIFAQNRPEWVVIEQGCYAYSLVVVPLYDTLGAEAITFIVTRAELSLIFCDKPE-- 180
Query: 135 NRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYD-EIIDLGRE------SRKAF 187
KA M LL G + + P + + + S+D +I++ G++ S K+F
Sbjct: 181 ---------KARM----LLDGVEKKLTPVLKTVVLMDSFDIDIVERGKKCGVNIISMKSF 227
Query: 188 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----DIVPA 243
A + K DD+A +TSGTTGNPKG M+THKN++ + ++
Sbjct: 228 ESLGRANRQ-KPRPPAPDDLAVICFTSGTTGNPKGAMITHKNIVSDCSAFVMMTESVLLP 286
Query: 244 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVY 301
+ D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 287 DRDDILISFLPLAHMFERVVETAMLCHGAKIGFFQGDIRLLMDDLKMLQPTIFPVVPRLL 346
Query: 302 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 361
++ I Q A TA KR F R + + + +
Sbjct: 347 NRMFDKIFGQ--------------------ANTALKRWLLDFASKRKEAELRSGIIRNNS 386
Query: 362 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVKV 418
LW +KL++ KIQ+++G K + G+ P+ + A+G +
Sbjct: 387 LW---------------DKLIFHKIQASLG-GKVRLMITGAAPVSATVLTFLRAALGCQF 430
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + + P G VG P+ IK+VD E A +G V V+G
Sbjct: 431 YEGYGQTECTAGCSLSIPGDWTAGHVGAPMPCNHIKLVDVEEMNYFAAKGEGEVCVKGPN 490
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V +GY K+P T +ALD+DGWL+TGD+G P+ G L + R K L+
Sbjct: 491 VFKGYLKDPEKTAEALDKDGWLHTGDVGKWLPN----------GALKIIDRKKHIFKLAQ 540
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E RS + Q+ V G+ Q AI+VPD E V AK+ I E
Sbjct: 541 GEYIAPEKIENVYQRSEPVAQVFVYGESLQAFLIAIVVPDPEAVCPWAKKRGI-QGSYGE 599
Query: 598 LSKEKTI 604
L + K +
Sbjct: 600 LCRNKDL 606
>gi|426256230|ref|XP_004021744.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 3 [Ovis
aries]
Length = 665
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 155/550 (28%), Positives = 245/550 (44%), Gaps = 84/550 (15%)
Query: 73 KPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPE 132
KP++ S +W++ +QG + V +E + +I N +E + V+ PE
Sbjct: 114 KPDQPYEWLSYK--QWVIIEQGCFTYSMVIVPLYDTLGTEAITYIINKAELSLVFVDKPE 171
Query: 133 FFNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRK 185
N + E + +K ++ I+L+ S D++E + + S + DLGR +R+
Sbjct: 172 KANLLLEGVENKLIPCLKTIVLM----DSYGSDLLERGKKCGVEIISMKAMEDLGRANRQ 227
Query: 186 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI----- 240
K + +D+A +TSGTTGNPKG M+TH+N++ + +
Sbjct: 228 ------------KPKPPAPEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKMTENTF 275
Query: 241 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVP 298
+P + D +S LP H++ER + G ++ + +R L DDL+ QP VP
Sbjct: 276 IPTSD-DTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVP 334
Query: 299 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 358
+ ++ I Q A T KR F R + + +
Sbjct: 335 RLLNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIR 374
Query: 359 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIG 415
+ LW +KL++ KIQS++G K + G+ P+ + A+G
Sbjct: 375 NNSLW---------------DKLIFHKIQSSLG-GKVRLMITGAAPVSATVLTFLRAALG 418
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ GYG TE + P G VG P+ + IK+VD E L A +G V V+
Sbjct: 419 CQFYEGYGQTECTAGCCLTIPGDWTAGHVGAPMPCSIIKLVDVEEMNYLAAKGEGEVCVK 478
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
GS V QGY K+P T +ALD+DGWL+TGDIG P+ G L + R K
Sbjct: 479 GSNVFQGYLKDPVKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFK 528
Query: 536 LSTGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
L+ GE + P ++E RS I Q+ V G+ Q AI+VPD E + A++ IV
Sbjct: 529 LAQGEYIAPEKIENIYQRSEPIAQVFVHGESLQAFLIAIVVPDVETLGAWAQKRGIV-GS 587
Query: 595 ASELSKEKTI 604
EL + K +
Sbjct: 588 FEELCRNKDV 597
>gi|260771944|ref|ZP_05880862.1| long-chain-fatty-acid--CoA ligase [Vibrio metschnikovii CIP 69.14]
gi|260613236|gb|EEX38437.1| long-chain-fatty-acid--CoA ligase [Vibrio metschnikovii CIP 69.14]
Length = 601
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 151/560 (26%), Positives = 256/560 (45%), Gaps = 67/560 (11%)
Query: 75 EEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFF 134
++K+++ S N RW +AD L + V ++ E+ +I +++++ L V +
Sbjct: 60 QDKVAICSPNMPRWTIADFAALQARLVTVPIYPTNTPEQCAYILHNADAKVLFVGEQAQY 119
Query: 135 NRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDAR 194
+ ++ II + S D+ F++ + I G +++A + A+
Sbjct: 120 DVALAIFEQCETLQLIIAM-----SDDIDLQGFCHAFTWSDFIAQGSTAQQAELSARIAK 174
Query: 195 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 254
+Y DD+ T +YTSGTTG PKGVML ++N+ Q+ + + D L LP
Sbjct: 175 ANY-------DDLYTLIYTSGTTGQPKGVMLDYRNIGAQLEGHDQRLTLSDQDISLCFLP 227
Query: 255 PWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 313
HV+ERA ++ +G +Y V +++ L +P M +VP YE ++S I +++
Sbjct: 228 LSHVFERAWSCYVLYKGATNVYLQEVSQVREALSEVRPTVMCAVPRFYEKIFSAIHEKVA 287
Query: 314 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 373
+ R+ + F + C N +QPS WL R
Sbjct: 288 KAPFHRKAL--------FTWAVNMGAKMALCRQEN-RQPS-------WLLVRS------- 324
Query: 374 LHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 432
+ LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 325 -YQLADKLVLVKLRALLGGRIHFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVS 383
Query: 433 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 492
S+G + + ++KI E NE+L VRG VM+GY+K P T
Sbjct: 384 CWNDHQFNPDSIGISMPNVQLKI--GENNEIL---------VRGPMVMRGYYKMPQETAN 432
Query: 493 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 552
+ DE G+L TGD G I + G + + R K+ + S G+ + P +E
Sbjct: 433 SFDEQGFLKTGDAGHIDEY----------GNVFITDRIKELMKTSNGKYIAPQLVEGTIG 482
Query: 553 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTI 604
+ I QI VI ++ A+IVP + + AK L+I + D EL K EK +
Sbjct: 483 KDHFIEQIAVIADTRKFVSALIVPCFDTLESYAKELNIKYHDRLELIKHSQVLEMFEKRV 542
Query: 605 SLLYGELRKWTSKCSFQIGP 624
L L K+ F++ P
Sbjct: 543 HDLQQGLAKFEQVKQFKLLP 562
>gi|377568695|ref|ZP_09797872.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377534072|dbj|GAB43037.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 609
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 261/545 (47%), Gaps = 80/545 (14%)
Query: 63 FAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSE 122
A GL +GVK + + + N + + D L GAI + SS E++ +++ ++E
Sbjct: 58 IAGGLAALGVKRGDTVGIMLTNRPEFHLVDAAALHLGAIPFSIYNTSSPEQIEYLFGNAE 117
Query: 123 SVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRE 182
+ + E + F + T + A R +++ +V+ VE+ P E D
Sbjct: 118 NSVVVTE--QVFLPVL-TAANTAVSRTVVVDGVATGAVSLADVEQTPA---PEGFD---- 167
Query: 183 SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 242
F+ S ++ + DD+AT +YTSGTTG PKGV +TH+N++ ++ +L +IV
Sbjct: 168 ----FTAS--------WQAVQPDDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEIVQ 215
Query: 243 AENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLV 300
A D+ +S LP H+ +R + RGI++ R + L P + VP V
Sbjct: 216 AGFDDRAISYLPAAHIADRVSSHAANMMRGIQITTVPDPREIAAALPDVHPTFFFGVPRV 275
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISF---AYTAFKRIYEGFCLTRNQKQPSYLVA 357
++ + +GI+ ++ S+ V +AL +F A TA R+ EG K+ L
Sbjct: 276 WQKIRAGIEAKLAEESSP---VKKALAGWAFGVGASTAQARV-EG-------KKSGGLA- 323
Query: 358 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGG--SLPMHIDLFYEAIG 415
H LA++LV K+++A+G+ + +G G ++P + F+ +G
Sbjct: 324 -----------------HGLADRLVLHKVRTALGLDQVSFAGSGAAAIPPEVLKFFLGLG 366
Query: 416 VKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVR 475
+ V +G++E++ V +G+VG P+ E+K+ D G + VR
Sbjct: 367 IPVLEVWGMSETTGVSTMTTSDNLRIGTVGTPVRGMEVKLAD-----------DGELLVR 415
Query: 476 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 535
G VM+GY K P T + +D DGWL+TGDI I G V +++ R K+ ++
Sbjct: 416 GPVVMRGYRKQPDKTAETIDADGWLSTGDIATI---------DDDGNVTIVD-RKKELMI 465
Query: 536 LSTGENVEPLELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 594
+G+N+ P +E A SSLI Q+ IG + A++V D + AK+L + AD
Sbjct: 466 NESGKNMSPTNIENAMKAASSLIGQVAAIGDARPYVSALVVLDPDAAAARAKKLDLSGAD 525
Query: 595 ASELS 599
+ELS
Sbjct: 526 LTELS 530
>gi|345865841|ref|ZP_08818008.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345123051|gb|EGW52964.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 607
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 260/525 (49%), Gaps = 64/525 (12%)
Query: 54 SKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEE 113
+++ +EI + + L G++P +++++ N W++ DQ L+ G + V + ++
Sbjct: 51 AEMGREIARWRQALLQEGLEPGDRVAIQLRNCPEWVMFDQAALSLGLVTVPLYTDDRADA 110
Query: 114 LLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAPDIVEEIPVFSY 173
+ +I + L V++ + R+ L ++ +++L G E++P S
Sbjct: 111 VAYILQDAVVKLLLVQDAGRWRRMVSALQGVETLQRVVVLEG---------AEQLPESSQ 161
Query: 174 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 233
+ + R + +S A + + +A+ VYTSGTTG PKGVML+H N+L
Sbjct: 162 HQRV---RAAGTWLPESGPA---LQPRSADPHSLASIVYTSGTTGRPKGVMLSHWNMLSV 215
Query: 234 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQP 291
+ +V D FLS LP H ER GY++ G + Y +V L +D+Q +P
Sbjct: 216 AHASLTVVDCYRQDLFLSFLPLSHTLERTAGYYLPLMAGATVAYARSVTQLAEDMQCIRP 275
Query: 292 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 351
+I+VP ++E +Y+ +Q+Q+ R ++AR L R++ ++ GF +Q
Sbjct: 276 TVIIAVPRIFERIYARLQEQL----KQRSLLARGLFRLT--------LHCGFIQFEHQMG 323
Query: 352 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFY 411
W+ + + L+A+K++ + G + +SGG +L + F
Sbjct: 324 RQG--------WSPKLLLMPLLRRLVADKVLAR----LGGRLRGAISGGAALSPDVSRFM 371
Query: 412 EAIGVKVQVGYGLTESSPVIAARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKG 470
++G+ + GYGLTE+SPVI+ P NV + SVG P+ E++I E +E+L
Sbjct: 372 LSLGLPILQGYGLTETSPVISV-NPMDNVKVDSVGVPLRGVEVRI--GENDELL------ 422
Query: 471 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 530
VK G M GY+ N +AT + +D +GWL+TGD R +R + + GR
Sbjct: 423 -VKTPGR--MLGYWNNHAATAEMIDAEGWLHTGD-------QVRIDEQRH---IYITGRL 469
Query: 531 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 575
KD +VLS GE + P ++E A LI Q++V+G+ + A++V
Sbjct: 470 KDILVLSNGEKIPPSDMEMAIALDPLIEQVLVVGEGKPYLAALLV 514
>gi|55730743|emb|CAH92092.1| hypothetical protein [Pongo abelii]
Length = 698
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 240/530 (45%), Gaps = 77/530 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG LA + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCLAYSMVVVPLYDTLGNEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+L+ + ++VE + V S + DLGR +R+
Sbjct: 206 AILLLEGVENKLIPGLKIIVLM----DAYGSELVERGQKCGVEVTSMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ + V
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATENTVN 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 310 PCPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIGNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE-AIGVKV 418
LW R L++ K+QS++G + V+G + + F A+G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKR 587
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++
Sbjct: 565 GEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWARK 614
>gi|449432710|ref|XP_004134142.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal-like
[Cucumis sativus]
Length = 695
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 252/580 (43%), Gaps = 74/580 (12%)
Query: 35 VATRIRISRRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQG 94
+ TRIR ++ + GL G+ + L+ N WLV D
Sbjct: 98 LGTRIRCDGTVGEYKWMTYGEAGTARTALGSGLVNHGIPKGSCIGLYFINRPEWLVVDHA 157
Query: 95 MLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLW 154
A I+V + + +I NH+ V + P+ N + L +R I+++
Sbjct: 158 CSAYSYISVPLYDTLGPDAVKYIVNHA-LVQVIFCVPQTLNSLLSFLSEIPTVRLIVVVG 216
Query: 155 GKKSSVAPDIVEE--IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 212
G + P + + V +Y ++ G + + F SDDIAT Y
Sbjct: 217 GVDDQI-PSLPSSTGVQVLTYASLLSQGSTNIQPFCPPK------------SDDIATICY 263
Query: 213 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGI 272
TSGTTG PKG +LTH NL+ + + D ++S LP H+YERA G+
Sbjct: 264 TSGTTGTPKGAVLTHGNLIASVAGCSLALKFFPSDVYISYLPLAHIYERANQVSTVYFGV 323
Query: 273 ELMYTAVRNLK--DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 330
+ + N+K DD+ +P SVP +Y +Y+GI + TS + + A
Sbjct: 324 AVGFYQGDNMKLMDDMIALRPTIFCSVPRLYNRIYAGIINAVKTSGVLKERLFNA----- 378
Query: 331 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 390
AY + ++ N K PS LW +KLV+ KI++ +
Sbjct: 379 -AYNSKRQA------IMNGKSPS----------------PLW------DKLVFNKIKAKL 409
Query: 391 GISKAGVSGGGSLPMHIDL--FYE-AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 447
G + V G+ P+ D+ F + G V GYG+TE+S VI+A P + G VG P
Sbjct: 410 G-GRVRVLASGASPLSPDILEFLKICFGGVVFEGYGMTETSCVISAMDPDDTLCGHVGAP 468
Query: 448 INHTEIKIVDAE----TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 503
EIK+VD T++ P S+G + VRG V +GYFK+ T++A+DEDGWL+TG
Sbjct: 469 NPACEIKLVDVPEMNYTSDDQPY-SRGEICVRGPLVFKGYFKDEVQTREAVDEDGWLHTG 527
Query: 504 DIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 562
DIG W+ GG L + R K+ L+ GE + P ++E + + Q V
Sbjct: 528 DIGLWMQ-----------GGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFV 576
Query: 563 IGQDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKE 601
G +V E L A A I + D ++L +
Sbjct: 577 YGDSFNASLVAVVSVDVETLKAWASSEGIKYNDLAQLCND 616
>gi|126331182|ref|XP_001363547.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 [Monodelphis
domestica]
Length = 698
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 243/548 (44%), Gaps = 80/548 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ +F+ N W++ +QG + V +E + +I N +E + V+ P+
Sbjct: 146 PDQYFGIFAQNRPEWVIIEQGCYTYSMVVVPLYDTLGNEAITYIINKAELSLVFVDKPDK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E++ +K ++ I+++ D++E I + S + DLGR +R+
Sbjct: 206 AELMLESVANKLIPVLKTIVIM----DPFDKDLLERGKNHGIEIMSMKALEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + DD+A +TSGTTGNPKG ++TH+N++ +++ +V
Sbjct: 261 -----------KPKPPSPDDLALICFTSGTTGNPKGALITHQNVVSDCSGFVKATEKVVS 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H++ER + G ++ + +R L DDL+ QP VP +
Sbjct: 310 PCQDDILISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKMLQPTIFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDKIFGQ--------------------ANTTMKRWILDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVK 417
LW RII + KIQ+++G K + G+ P+ + A+G +
Sbjct: 410 SLWDRII---------------FNKIQASLG-GKVRLMVTGAAPVSATVLTFLRSALGCQ 453
Query: 418 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 477
GYG TE + + P G VG P+ IK+VD E L A +G + V+G
Sbjct: 454 FYEGYGQTECTAGCSLTVPGDWTAGHVGAPMPCCHIKLVDVEEMNYLAAKGEGEICVKGP 513
Query: 478 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 537
V +GY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 514 NVFKGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLA 563
Query: 538 TGENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADAS 596
GE + P ++E RS + Q+ V G+ Q AI+VPD E + AK+ I
Sbjct: 564 QGEYIAPEKIENIYQRSEPVAQVFVHGESLQAFLIAIVVPDVEVLCPWAKKKGI-SGTYE 622
Query: 597 ELSKEKTI 604
EL + K +
Sbjct: 623 ELCRNKDV 630
>gi|332820676|ref|XP_003310629.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Pan
troglodytes]
gi|397505976|ref|XP_003823514.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Pan
paniscus]
Length = 698
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 244/547 (44%), Gaps = 78/547 (14%)
Query: 74 PEEKLSLFSDNSCRWLVADQGMLATGAINVVRGSRSSSEELLHIYNHSESVALAVENPEF 133
P++ + +F+ N W++ +QG A + V +E + +I N +E + V+ PE
Sbjct: 146 PDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEK 205
Query: 134 FNRIAETLCSK--AAMRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKA 186
+ E + +K ++ I+++ + ++VE + V S + DLGR +R+
Sbjct: 206 AKLLLEGVENKLIPGLKIIVVM----DAYGSELVERGQRCGVEVTSMKAMEDLGRANRR- 260
Query: 187 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVP 242
K + +D+A +TSGTTGNPKG M+TH+N++ +++ +P
Sbjct: 261 -----------KPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATEKALP 309
Query: 243 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLV 300
D +S LP H+YE+ + G ++ + +R L DDL+ QP VP +
Sbjct: 310 LSASDTHISYLPLAHMYEQLLKCVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRL 369
Query: 301 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 360
++ I Q A T KR F R + + + +
Sbjct: 370 LNRMFDRIFGQ--------------------ANTTLKRWLLDFASKRKEAELRSGIIRNN 409
Query: 361 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA-IGVKV 418
LW R L++ K+QS++G + V+G + + F A +G +
Sbjct: 410 SLWDR---------------LIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQF 454
Query: 419 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 478
GYG TE + P G VG P+ IK+VD E + A +G V V+G
Sbjct: 455 YEGYGQTECAAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKGPN 514
Query: 479 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 538
V QGY K+P+ T +ALD+DGWL+TGDIG P+ G L + R K L+
Sbjct: 515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQ 564
Query: 539 GENVEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASE 597
GE + P ++E +RS + Q+ V G+ Q AI+VPD E + A++ E
Sbjct: 565 GEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWAQKRGF-EGSFEE 623
Query: 598 LSKEKTI 604
L + K +
Sbjct: 624 LCRNKDV 630
>gi|108759016|ref|YP_630755.1| long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK 1622]
gi|108462896|gb|ABF88081.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK
1622]
Length = 604
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 253/598 (42%), Gaps = 67/598 (11%)
Query: 43 RRNHRFRVFCESKLEQEILDFAEGLRVIGVKPEEKLSLFSDNSCRWLVADQGMLATGAIN 102
++N ++ S+ + + D GL +GV +++++ S+N W V G
Sbjct: 29 KKNGQWVWTTYSRFGEMVDDLRGGLAQLGVGAGDRVAVISNNRLEWAVGAYATYTLGGAY 88
Query: 103 VVRGSRSSSEELLHIYNHSESVALAVENPEFFNRIAETLCSKAAMRFIILLWGKKSSVAP 162
V +EL I N S + + + RI + II G S
Sbjct: 89 VPMYESQQVKELQFILNDSGAKVVFCATDDIAQRIQSVRAELPQLEHIIRFSGTTSDTD- 147
Query: 163 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 222
S+ ++ G E+ A D+A +YTSGTTG PKG
Sbjct: 148 ---------SFATLLRRGAETPTPLVSPKPA------------DLAGLIYTSGTTGQPKG 186
Query: 223 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIEL-MYTAVR 280
VML+H N+ + +++++ P D+ L+ LP HV+ + + + S G + + AV
Sbjct: 187 VMLSHANIARNVSAMHEVFPMGTEDRSLAFLPWAHVFGQTVELHALLSMGASMAIAEAVE 246
Query: 281 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 340
+ D+L +P + SVP ++ +Y G+QK++ A + V R + A A +R
Sbjct: 247 KIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRM----AGEKAVTRFMFHRGLAVAAQRR-- 300
Query: 341 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 399
L K +L H +K+V+ K+++ G K SG
Sbjct: 301 ---ALAEAGKS----------------SGLLDLQHAFFDKVVFSKVRARFGGRLKYAFSG 341
Query: 400 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 459
G ++ + F + +G+ V GYGLTE+SP+ A P +GSVG + ++I A
Sbjct: 342 GSAISKEVAEFIDNLGITVYEGYGLTETSPIATANFPNNRKIGSVGKALPGIRVEIDTAA 401
Query: 460 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 519
T E ++G + V G VM GY+ P ++ +G TGD+G++ P
Sbjct: 402 TGEA----TQGEIVVHGHNVMMGYYNKPEENEKVFTGNGGFRTGDMGYLDPD-------- 449
Query: 520 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 579
G L + GR K+ L G+ V P +E++ S+ I +V G ++ AIIV D +
Sbjct: 450 --GYLYITGRIKEQYKLENGKYVVPSPIEQSLALSTYIANALVHGMNKPYNVAIIVVDVD 507
Query: 580 EVLMAAKRLSIVHADASELSKEKTISLLYGE-LRKWTSKCSFQIGP--IHVVDEPFTV 634
+ A + EL K + LY E L ++T P ++ E FTV
Sbjct: 508 TLKKWATEKGLDTTSMPELLKRPEVLQLYREQLNEFTRDVKGYERPQRFLLISEDFTV 565
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,755,371,592
Number of Sequences: 23463169
Number of extensions: 406911342
Number of successful extensions: 1119945
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 25533
Number of HSP's successfully gapped in prelim test: 18939
Number of HSP's that attempted gapping in prelim test: 976606
Number of HSP's gapped (non-prelim): 110267
length of query: 641
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 492
effective length of database: 8,863,183,186
effective search space: 4360686127512
effective search space used: 4360686127512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)