Your job contains 1 sequence.
>006532
MATGVAARTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFSHSPVS
ENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNT
NYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDR
GEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD
GPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQA
VISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER
AELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPI
PVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQ
PSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRS
TTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESR
GLHYMVDFPHVEENKRLPTIILPSLVNCTWSSRQLHKLPVC
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006532
(641 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2185480 - symbol:AO "L-aspartate oxidase" spec... 2458 2.5e-255 1
TIGR_CMR|GSU_1827 - symbol:GSU_1827 "L-aspartate oxidase"... 1200 5.1e-122 1
UNIPROTKB|Q9KPA4 - symbol:nadB "L-aspartate oxidase" spec... 1070 3.0e-108 1
TIGR_CMR|VC_2469 - symbol:VC_2469 "L-aspartate oxidase" s... 1070 3.0e-108 1
TIGR_CMR|CPS_4130 - symbol:CPS_4130 "L-aspartate oxidase"... 1067 6.3e-108 1
TIGR_CMR|SO_1341 - symbol:SO_1341 "L-aspartate oxidase" s... 1055 1.2e-106 1
TIGR_CMR|CBU_0101 - symbol:CBU_0101 "L-aspartate oxidase"... 1030 5.3e-104 1
UNIPROTKB|P10902 - symbol:nadB species:83333 "Escherichia... 1022 3.7e-103 1
TIGR_CMR|CHY_2373 - symbol:CHY_2373 "L-aspartate oxidase"... 654 2.0e-71 2
TIGR_CMR|SPO_3244 - symbol:SPO_3244 "L-aspartate oxidase,... 646 6.8e-71 2
TIGR_CMR|CHY_0063 - symbol:CHY_0063 "fumarate reductase, ... 717 7.7e-71 1
TIGR_CMR|CHY_1373 - symbol:CHY_1373 "fumarate reductase, ... 675 2.2e-66 1
TAIR|locus:2173654 - symbol:SDH1-1 "succinate dehydrogena... 674 2.8e-66 1
UNIPROTKB|P0AC41 - symbol:sdhA species:83333 "Escherichia... 666 2.0e-65 1
UNIPROTKB|O53370 - symbol:sdhA "PROBABLE SUCCINATE DEHYDR... 665 2.5e-65 1
POMBASE|SPAC1556.02c - symbol:sdh1 "succinate dehydrogena... 662 5.2e-65 1
DICTYBASE|DDB_G0280535 - symbol:sdhA "succinate dehydroge... 660 8.5e-65 1
UNIPROTKB|P64174 - symbol:frdA "Fumarate reductase flavop... 657 1.8e-64 1
TIGR_CMR|SO_1928 - symbol:SO_1928 "succinate dehydrogenas... 655 2.9e-64 1
TAIR|locus:2062146 - symbol:SDH1-2 "succinate dehydrogena... 655 2.9e-64 1
UNIPROTKB|G4NE44 - symbol:MGG_00168 "Uncharacterized prot... 654 3.7e-64 1
UNIPROTKB|Q28ED0 - symbol:sdha "Succinate dehydrogenase [... 632 4.8e-64 2
TIGR_CMR|CJE_0488 - symbol:CJE_0488 "succinate dehydrogen... 651 7.6e-64 1
TIGR_CMR|CPS_2217 - symbol:CPS_2217 "succinate dehydrogen... 650 9.7e-64 1
MGI|MGI:1914195 - symbol:Sdha "succinate dehydrogenase co... 649 1.2e-63 1
CGD|CAL0005687 - symbol:SDH1 species:5476 "Candida albica... 647 2.0e-63 1
UNIPROTKB|Q801S2 - symbol:sdha-b "Succinate dehydrogenase... 644 4.2e-63 1
UNIPROTKB|F1Q1X9 - symbol:SDHA "Uncharacterized protein" ... 642 6.9e-63 1
UNIPROTKB|Q9KQB1 - symbol:VC_2089 "Succinate dehydrogenas... 642 6.9e-63 1
TIGR_CMR|VC_2089 - symbol:VC_2089 "succinate dehydrogenas... 642 6.9e-63 1
RGD|621557 - symbol:Sdha "succinate dehydrogenase complex... 642 6.9e-63 1
UNIPROTKB|F8WG21 - symbol:Sdha "Succinate dehydrogenase [... 642 6.9e-63 1
SGD|S000003581 - symbol:YJL045W "Minor succinate dehydrog... 642 6.9e-63 1
UNIPROTKB|P31040 - symbol:SDHA "Succinate dehydrogenase [... 641 8.8e-63 1
UNIPROTKB|Q5R616 - symbol:SDHA "Succinate dehydrogenase [... 641 8.8e-63 1
UNIPROTKB|Q0QF01 - symbol:SDHA "Succinate dehydrogenase [... 639 1.4e-62 1
ASPGD|ASPL0000038035 - symbol:AN2916 species:162425 "Emer... 637 2.3e-62 1
UNIPROTKB|G3MY67 - symbol:SDHA "Succinate dehydrogenase [... 637 2.3e-62 1
UNIPROTKB|Q6PA58 - symbol:sdha-a "Succinate dehydrogenase... 637 2.3e-62 1
UNIPROTKB|Q8HXW3 - symbol:SDHA "Succinate dehydrogenase [... 635 3.8e-62 1
TIGR_CMR|CBU_1401 - symbol:CBU_1401 "succinate dehydrogen... 633 6.2e-62 1
GENEDB_PFALCIPARUM|PF10_0334 - symbol:PF10_0334 "flavopro... 630 1.3e-61 1
UNIPROTKB|Q9YHT1 - symbol:SDHA "Succinate dehydrogenase [... 630 1.3e-61 1
UNIPROTKB|Q8IJ66 - symbol:PF10_0334 "Flavoprotein subunit... 630 1.3e-61 1
UNIPROTKB|F1NPJ4 - symbol:SDHA "Succinate dehydrogenase [... 629 1.6e-61 1
FB|FBgn0261439 - symbol:SdhA "Succinate dehydrogenase A" ... 626 3.4e-61 1
UNIPROTKB|P31039 - symbol:SDHA "Succinate dehydrogenase [... 626 3.4e-61 1
SGD|S000001631 - symbol:SDH1 "Flavoprotein subunit of suc... 626 3.4e-61 1
WB|WBGene00015391 - symbol:sdha-1 species:6239 "Caenorhab... 626 3.4e-61 1
UNIPROTKB|Q09508 - symbol:sdha-1 "Succinate dehydrogenase... 626 3.4e-61 1
CGD|CAL0005198 - symbol:SDH12 species:5476 "Candida albic... 621 1.2e-60 1
UNIPROTKB|Q5A1E8 - symbol:SDH12 "Putative uncharacterized... 621 1.2e-60 1
TIGR_CMR|SPO_0360 - symbol:SPO_0360 "succinate dehydrogen... 620 1.5e-60 1
UNIPROTKB|Q0BX75 - symbol:sdhA "Succinate dehydrogenase, ... 619 1.9e-60 1
TIGR_CMR|ECH_0315 - symbol:ECH_0315 "succinate dehydrogen... 613 8.1e-60 1
WB|WBGene00016392 - symbol:sdha-2 species:6239 "Caenorhab... 612 1.0e-59 1
TIGR_CMR|APH_0158 - symbol:APH_0158 "succinate dehydrogen... 607 3.5e-59 1
TIGR_CMR|APH_0161 - symbol:APH_0161 "succinate dehydrogen... 607 3.5e-59 1
TIGR_CMR|BA_4662 - symbol:BA_4662 "L-aspartate oxidase" s... 514 5.4e-59 2
UNIPROTKB|P00363 - symbol:frdA species:83333 "Escherichia... 605 5.7e-59 1
UNIPROTKB|Q9KNS5 - symbol:VC_2656 "Fumarate reductase, fl... 593 1.1e-57 1
TIGR_CMR|VC_2656 - symbol:VC_2656 "fumarate reductase, fl... 593 1.1e-57 1
UNIPROTKB|G5E6M7 - symbol:SDHA "Succinate dehydrogenase [... 589 2.8e-57 1
TIGR_CMR|NSE_0376 - symbol:NSE_0376 "succinate dehydrogen... 589 2.8e-57 1
UNIPROTKB|E9PBJ5 - symbol:SDHA "Succinate dehydrogenase [... 526 1.3e-55 2
UNIPROTKB|D6RFM5 - symbol:SDHA "Succinate dehydrogenase [... 571 2.3e-55 1
UNIPROTKB|O53670 - symbol:Rv0248c "Succinate dehydrogenas... 374 5.2e-55 2
FB|FBgn0036222 - symbol:CG5718 species:7227 "Drosophila m... 561 2.6e-54 1
ZFIN|ZDB-GENE-040426-874 - symbol:sdha "succinate dehydro... 561 2.6e-54 1
TIGR_CMR|BA_4754 - symbol:BA_4754 "succinate dehydrogenas... 544 1.7e-52 1
TIGR_CMR|CJE_0458 - symbol:CJE_0458 "fumarate reductase, ... 445 3.1e-52 2
UNIPROTKB|P65499 - symbol:nadB "L-aspartate oxidase" spec... 484 3.3e-51 2
UNIPROTKB|F1NHM1 - symbol:SDHA "Succinate dehydrogenase [... 507 1.4e-48 1
UNIPROTKB|Q8EJR4 - symbol:frdA "Quinol:fumarate reductase... 460 3.0e-42 1
TIGR_CMR|SO_0398 - symbol:SO_0398 "fumarate reductase fla... 460 3.0e-42 1
UNIPROTKB|I3LS54 - symbol:SDHA "Succinate dehydrogenase [... 392 6.7e-34 1
UNIPROTKB|Q74DY8 - symbol:frdA "Succinate dehydrogenase/f... 187 4.7e-24 2
TIGR_CMR|GSU_1177 - symbol:GSU_1177 "fumarate reductase, ... 187 4.7e-24 2
WB|WBGene00018610 - symbol:F48E8.3 species:6239 "Caenorha... 179 1.5e-18 2
CGD|CAL0005898 - symbol:OSM1 species:5476 "Candida albica... 204 2.7e-18 2
UNIPROTKB|Q59T35 - symbol:OSM1 "Potential fumarate reduct... 204 2.7e-18 2
UNIPROTKB|P0C278 - symbol:fccA "Fumarate reductase flavop... 187 7.5e-18 2
CGD|CAL0001569 - symbol:OSM2 species:5476 "Candida albica... 170 8.5e-16 2
TIGR_CMR|SO_0970 - symbol:SO_0970 "fumarate reductase fla... 170 4.4e-15 2
POMBASE|SPAC17A2.05 - symbol:osm1 "fumerate reductase (pr... 138 1.2e-13 2
SGD|S000000773 - symbol:FRD1 "Soluble fumarate reductase"... 139 9.9e-13 2
ASPGD|ASPL0000043709 - symbol:AN10296 species:162425 "Eme... 125 1.7e-12 2
ASPGD|ASPL0000044947 - symbol:AN1543 species:162425 "Emer... 148 5.5e-12 2
TIGR_CMR|SO_1421 - symbol:SO_1421 "fumarate reductase fla... 128 5.9e-12 2
SGD|S000003812 - symbol:OSM1 "Fumarate reductase, catalyz... 125 1.1e-10 2
UNIPROTKB|G4N741 - symbol:MGG_03619 "Fumarate reductase" ... 125 5.0e-10 2
TIGR_CMR|SO_3058 - symbol:SO_3058 "flavocytochrome c flav... 118 1.8e-09 2
TIGR_CMR|SO_4620 - symbol:SO_4620 "fumarate reductase, fl... 104 1.1e-06 2
UNIPROTKB|Q8EC43 - symbol:SO_3301 "Flavocytochrome c flav... 99 4.6e-05 3
TIGR_CMR|SO_3301 - symbol:SO_3301 "flavocytochrome c flav... 99 4.6e-05 3
UNIPROTKB|Q8EH17 - symbol:SO_1414 "Flavocytochrome c flav... 99 6.9e-05 2
TIGR_CMR|SO_1414 - symbol:SO_1414 "flavocytochrome c flav... 99 6.9e-05 2
>TAIR|locus:2185480 [details] [associations]
symbol:AO "L-aspartate oxidase" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008734 "L-aspartate oxidase
activity" evidence=IEA;ISS] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0009435 "NAD biosynthetic process"
evidence=IEA;IGI;ISS;IMP] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR005288 InterPro:IPR015939 Pfam:PF02910
InterPro:IPR003953 Pfam:PF00890 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0009435
Gene3D:1.20.58.100 SUPFAM:SSF46977 eggNOG:COG0029
HOGENOM:HOG000160476 KO:K00278 GO:GO:0008734 TIGRFAMs:TIGR00551
OMA:AMVYRAK EMBL:AY045626 EMBL:BT001009 IPI:IPI00525854
RefSeq:NP_568304.1 UniGene:At.9942 HSSP:P10902
ProteinModelPortal:Q94AY1 SMR:Q94AY1 IntAct:Q94AY1 STRING:Q94AY1
PaxDb:Q94AY1 PRIDE:Q94AY1 EnsemblPlants:AT5G14760.1 GeneID:831328
KEGG:ath:AT5G14760 TAIR:At5g14760 InParanoid:Q94AY1
PhylomeDB:Q94AY1 ProtClustDB:PLN02815 Genevestigator:Q94AY1
Uniprot:Q94AY1
Length = 651
Score = 2458 (870.3 bits), Expect = 2.5e-255, P = 2.5e-255
Identities = 499/651 (76%), Positives = 549/651 (84%)
Query: 1 MATGVAA-RTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSW----F--LRFQRFN 53
MA V+ NF+ G +GQ+ S S+ TF +E SW F L+ +R
Sbjct: 1 MAAHVSTGNIHNFYLAGQVYRGQAF---SWSSASTFMANPFKEPSWSSGVFKALKAERCG 57
Query: 54 -FSH--SPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVI 110
+S SP+SE K +R V V S S KY+DF+VIGSGVAGL YALEVAK GTVAVI
Sbjct: 58 CYSRGISPISETSKPIRAVSVSS-----STKYYDFTVIGSGVAGLRYALEVAKQGTVAVI 112
Query: 111 TKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRE 170
TK EPHESNTNYAQGGVSAVLCP DSVESHM+DT+VAGA+LCD+ETVRVVCTEGP+RIRE
Sbjct: 113 TKDEPHESNTNYAQGGVSAVLCPLDSVESHMRDTMVAGAHLCDEETVRVVCTEGPERIRE 172
Query: 171 LIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHH 230
LIA+GASFD GEDGNLHLAREGGHSH RIVHAADMTGREIERALLEAV++DPNISVF+HH
Sbjct: 173 LIAMGASFDHGEDGNLHLAREGGHSHCRIVHAADMTGREIERALLEAVLNDPNISVFKHH 232
Query: 231 FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGD 290
FAIDLLT+ DG + VCHGVDTLN++T EVVRFISKVTLLASGGAGHIYPSTTNPLVATGD
Sbjct: 233 FAIDLLTSQDGLNTVCHGVDTLNIKTNEVVRFISKVTLLASGGAGHIYPSTTNPLVATGD 292
Query: 291 GMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGM 350
GMAMAHRAQAVISNMEFVQFHPTALADEGLPIK + REN+FLITEAVRGDGGILYNLGM
Sbjct: 293 GMAMAHRAQAVISNMEFVQFHPTALADEGLPIKLQTARENAFLITEAVRGDGGILYNLGM 352
Query: 351 ERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLK 410
ERFMP+YDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKP EKIL+HFPNIA+ECLK
Sbjct: 353 ERFMPVYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPREKILAHFPNIASECLK 412
Query: 411 YGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLE 470
+GLDIT QPIPVVPAAHYMCGGVRAGLQGETNV GL+VAGEVACTGLHGANRLASNSLLE
Sbjct: 413 HGLDITRQPIPVVPAAHYMCGGVRAGLQGETNVLGLFVAGEVACTGLHGANRLASNSLLE 472
Query: 471 ALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKS--LGCNVMHNILRRTKEVRKELQ 528
ALVFARRAVQPS + K T +D+ AS WTR VV + LG V+ I+ TKEVR+ELQ
Sbjct: 473 ALVFARRAVQPSTELMKRTRLDVCASEKWTRPVVATARLLGDEVIAKIIALTKEVRRELQ 532
Query: 529 SIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKL 588
+MW+YVGIVRST L TAE +I ELEA+WET+LFEHGWEQT V LEACEMRNLFCCAKL
Sbjct: 533 EVMWKYVGIVRSTIRLTTAERKIAELEAKWETFLFEHGWEQTVVALEACEMRNLFCCAKL 592
Query: 589 VVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSL-VNCTWSSRQLHKL 638
VVSSALARHESRGLHYM DFP VEE+KR+PTIILPS +WSSR+L +
Sbjct: 593 VVSSALARHESRGLHYMTDFPFVEESKRIPTIILPSSPTTASWSSRRLQNI 643
>TIGR_CMR|GSU_1827 [details] [associations]
symbol:GSU_1827 "L-aspartate oxidase" species:243231
"Geobacter sulfurreducens PCA" [GO:0008734 "L-aspartate oxidase
activity" evidence=ISS] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=ISS] InterPro:IPR005288
InterPro:IPR013027 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737 GO:GO:0009435
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:1.20.58.100
SUPFAM:SSF46977 HOGENOM:HOG000160476 KO:K00278 GO:GO:0008734
TIGRFAMs:TIGR00551 OMA:AMVYRAK RefSeq:NP_952877.1 HSSP:P00363
ProteinModelPortal:Q74C48 GeneID:2688675 KEGG:gsu:GSU1827
PATRIC:22026511 ProtClustDB:CLSK828587
BioCyc:GSUL243231:GH27-1755-MONOMER Uniprot:Q74C48
Length = 531
Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
Identities = 259/536 (48%), Positives = 339/536 (63%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
DF VIGSG+AGL +AL+ A+HGTVA++TK E ES TNYAQGG+++V D+ ++H++D
Sbjct: 6 DFLVIGSGIAGLAFALQAARHGTVAIVTKREVTESATNYAQGGIASVFSQDDTFDAHVED 65
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAA 203
T+VAGA +C ++ VR+V EGP IR LI G F R + L REGGHS RI+HA
Sbjct: 66 TLVAGAGICHEDVVRMVVEEGPKVIRNLIEWGVQFTRSGEA-FDLTREGGHSQRRILHAD 124
Query: 204 DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD------GPDAVCHGVDTLNVETQ 257
D+TGREIERAL+ A +PNI ++EHH AIDL+T P+ C G L +E
Sbjct: 125 DVTGREIERALVAAARENPNIRIYEHHIAIDLITEAKVTRKRVAPNR-CLGAHVLGIEDN 183
Query: 258 EVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALAD 317
V F +K+TLLA+GGAG +Y T NP VATGDG+AMA+RA A I+NMEF+QFHPT L
Sbjct: 184 VVRTFTAKITLLATGGAGKVYLYTCNPDVATGDGVAMAYRAGATIANMEFMQFHPTTL-- 241
Query: 318 EGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQL 377
P SFLI+EAVRG+G IL FM Y + +LAPRD+VAR+ID+++
Sbjct: 242 ----YHP---HAKSFLISEAVRGEGAILRRRDGTAFMEKYHKLKDLAPRDIVARAIDNEM 294
Query: 378 KKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGL 437
K E V LDI+HK E + + FPNI CL++GLD+T P+PVVPAAHY+CGGV
Sbjct: 295 KTHGEDCVFLDITHKDPEYVRNRFPNIYQTCLEFGLDMTRDPLPVVPAAHYLCGGVAVDA 354
Query: 438 QGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASN 497
GET++R LY GE A TGLHGANRLASNSLLEA V+A RA Q +++ + +
Sbjct: 355 NGETDIRYLYAIGEAAFTGLHGANRLASNSLLEAAVYAGRAYQHAVEELRQNHFEFPVIP 414
Query: 498 WWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAE 557
W S + M + + E+R+ MW YVGIVRS L+ A RI ++ E
Sbjct: 415 EWDSGTATDS---DEMVVVSQNWDEIRR----FMWNYVGIVRSDKRLERALRRIRLIQEE 467
Query: 558 WETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEE 613
E Y W T V + E+RN+ A+L+V AL R ESRGLHY +++P ++
Sbjct: 468 IEDYY----WNFT-VTSDLIELRNIATVAELIVKCALQRKESRGLHYTINYPERDD 518
>UNIPROTKB|Q9KPA4 [details] [associations]
symbol:nadB "L-aspartate oxidase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0006734 "NADH metabolic
process" evidence=ISS] [GO:0008734 "L-aspartate oxidase activity"
evidence=ISS] InterPro:IPR005288 InterPro:IPR013027
InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368 UniPathway:UPA00253
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737 GO:GO:0009435
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:1.20.58.100
SUPFAM:SSF46977 GO:GO:0006734 eggNOG:COG0029 KO:K00278 OMA:GERCLGA
ProtClustDB:PRK09077 GO:GO:0008734 GO:GO:0044318 TIGRFAMs:TIGR00551
PIR:B82074 RefSeq:NP_232098.1 ProteinModelPortal:Q9KPA4 SMR:Q9KPA4
PRIDE:Q9KPA4 DNASU:2613011 GeneID:2613011 KEGG:vch:VC2469
PATRIC:20083957 Uniprot:Q9KPA4
Length = 535
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 248/550 (45%), Positives = 336/550 (61%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
D VIGSG AGL AL+VA++G V V++K E T YAQGG++AV SDS+ESH+QD
Sbjct: 10 DVLVIGSGAAGLSLALQVAQYGKVIVLSKGPRSEGATFYAQGGIAAVFDESDSIESHVQD 69
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGN-----LHLAREGGHSHHR 198
T++AGA +CD++TVR + + ++ LI G FD+ ED + HL REGGHSH R
Sbjct: 70 TLIAGAGICDEQTVRFIAEHAKECVQWLIDGGVPFDKEEDSDNDHPRYHLTREGGHSHRR 129
Query: 199 IVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD-GPDA---VCHGVDTLNV 254
I+HAAD TG ++ +L + + PNI+V E H A+DL+T G DA V V N
Sbjct: 130 ILHAADATGMAMQTSLQDNAHNHPNITVLERHNALDLITEDKIGGDANKVVGAYVWNRNA 189
Query: 255 ETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTA 314
E E +R +K +LA+GGA +Y T+NP V++GDG+AMA RA ++N+EF QFHPT
Sbjct: 190 EHVETIR--AKFVVLATGGASKVYQYTSNPDVSSGDGIAMAWRAGCRVANLEFNQFHPTC 247
Query: 315 LADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSID 374
L P+ +FL+TEA+RG+G L RFMP +DERAELAPRD+VAR+ID
Sbjct: 248 L------YHPEA---RNFLLTEALRGEGAYLRRPDGSRFMPDFDERAELAPRDIVARAID 298
Query: 375 DQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVR 434
++K+ + LDISHKP + I HFP I + + G+D+T +PIP+VPAAHY CGGV
Sbjct: 299 FEMKRLGADCMYLDISHKPADFIEKHFPTIYSRLMDLGIDMTKEPIPIVPAAHYTCGGVM 358
Query: 435 AGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLS 494
QG+T+++ LY GEV+ TGLHGANR+ASNSLLE +V+A A Q I + S+ S
Sbjct: 359 VNPQGQTDLKQLYAIGEVSYTGLHGANRMASNSLLECVVYAWSASQDIIAQLPNASMPES 418
Query: 495 ASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDEL 554
W V C+ +L+ EL+ MW Y+GIVR+ L+ A RI L
Sbjct: 419 LPAWDESQVT-----CSDEEVVLQHNWH---ELRLFMWDYMGIVRTNKRLERAMRRIQLL 470
Query: 555 EAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP-HVEE 613
+ E Y + V EMRNL A+L+V A+ R ESRGLHY +D+P + E
Sbjct: 471 QQETHEY-----YSNFRVSNNLLEMRNLLQVAELMVRCAMQRKESRGLHYTLDYPDQLAE 525
Query: 614 NKRLPTIILP 623
+ PTI++P
Sbjct: 526 SG--PTILVP 533
>TIGR_CMR|VC_2469 [details] [associations]
symbol:VC_2469 "L-aspartate oxidase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0006734 "NADH metabolic process"
evidence=ISS] [GO:0008734 "L-aspartate oxidase activity"
evidence=ISS] InterPro:IPR005288 InterPro:IPR013027
InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368 UniPathway:UPA00253
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737 GO:GO:0009435
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:1.20.58.100
SUPFAM:SSF46977 GO:GO:0006734 eggNOG:COG0029 KO:K00278 OMA:GERCLGA
ProtClustDB:PRK09077 GO:GO:0008734 GO:GO:0044318 TIGRFAMs:TIGR00551
PIR:B82074 RefSeq:NP_232098.1 ProteinModelPortal:Q9KPA4 SMR:Q9KPA4
PRIDE:Q9KPA4 DNASU:2613011 GeneID:2613011 KEGG:vch:VC2469
PATRIC:20083957 Uniprot:Q9KPA4
Length = 535
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 248/550 (45%), Positives = 336/550 (61%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
D VIGSG AGL AL+VA++G V V++K E T YAQGG++AV SDS+ESH+QD
Sbjct: 10 DVLVIGSGAAGLSLALQVAQYGKVIVLSKGPRSEGATFYAQGGIAAVFDESDSIESHVQD 69
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGN-----LHLAREGGHSHHR 198
T++AGA +CD++TVR + + ++ LI G FD+ ED + HL REGGHSH R
Sbjct: 70 TLIAGAGICDEQTVRFIAEHAKECVQWLIDGGVPFDKEEDSDNDHPRYHLTREGGHSHRR 129
Query: 199 IVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLD-GPDA---VCHGVDTLNV 254
I+HAAD TG ++ +L + + PNI+V E H A+DL+T G DA V V N
Sbjct: 130 ILHAADATGMAMQTSLQDNAHNHPNITVLERHNALDLITEDKIGGDANKVVGAYVWNRNA 189
Query: 255 ETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTA 314
E E +R +K +LA+GGA +Y T+NP V++GDG+AMA RA ++N+EF QFHPT
Sbjct: 190 EHVETIR--AKFVVLATGGASKVYQYTSNPDVSSGDGIAMAWRAGCRVANLEFNQFHPTC 247
Query: 315 LADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSID 374
L P+ +FL+TEA+RG+G L RFMP +DERAELAPRD+VAR+ID
Sbjct: 248 L------YHPEA---RNFLLTEALRGEGAYLRRPDGSRFMPDFDERAELAPRDIVARAID 298
Query: 375 DQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVR 434
++K+ + LDISHKP + I HFP I + + G+D+T +PIP+VPAAHY CGGV
Sbjct: 299 FEMKRLGADCMYLDISHKPADFIEKHFPTIYSRLMDLGIDMTKEPIPIVPAAHYTCGGVM 358
Query: 435 AGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLS 494
QG+T+++ LY GEV+ TGLHGANR+ASNSLLE +V+A A Q I + S+ S
Sbjct: 359 VNPQGQTDLKQLYAIGEVSYTGLHGANRMASNSLLECVVYAWSASQDIIAQLPNASMPES 418
Query: 495 ASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDEL 554
W V C+ +L+ EL+ MW Y+GIVR+ L+ A RI L
Sbjct: 419 LPAWDESQVT-----CSDEEVVLQHNWH---ELRLFMWDYMGIVRTNKRLERAMRRIQLL 470
Query: 555 EAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP-HVEE 613
+ E Y + V EMRNL A+L+V A+ R ESRGLHY +D+P + E
Sbjct: 471 QQETHEY-----YSNFRVSNNLLEMRNLLQVAELMVRCAMQRKESRGLHYTLDYPDQLAE 525
Query: 614 NKRLPTIILP 623
+ PTI++P
Sbjct: 526 SG--PTILVP 533
>TIGR_CMR|CPS_4130 [details] [associations]
symbol:CPS_4130 "L-aspartate oxidase" species:167879
"Colwellia psychrerythraea 34H" [GO:0008734 "L-aspartate oxidase
activity" evidence=ISS] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=ISS] InterPro:IPR005288
InterPro:IPR013027 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737 GO:GO:0009435
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:1.20.58.100
SUPFAM:SSF46977 eggNOG:COG0029 HOGENOM:HOG000160476 KO:K00278
ProtClustDB:PRK09077 GO:GO:0008734 GO:GO:0044318 TIGRFAMs:TIGR00551
OMA:AMVYRAK RefSeq:YP_270785.1 ProteinModelPortal:Q47WN7 SMR:Q47WN7
STRING:Q47WN7 GeneID:3522830 KEGG:cps:CPS_4130 PATRIC:21471121
BioCyc:CPSY167879:GI48-4143-MONOMER Uniprot:Q47WN7
Length = 532
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 243/548 (44%), Positives = 327/548 (59%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
D +IGSG AGL AL +A++ V +++K +E +T YAQGG++AV +DSV SH++D
Sbjct: 8 DVLIIGSGAAGLTLALHLAQNADVVILSKGPLNEGSTFYAQGGIAAVFDENDSVASHVED 67
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGE----DGNLHLAREGGHSHHRI 199
TIVAGA LCD++TVR + LI G FD+ + + HL REGGHSH RI
Sbjct: 68 TIVAGAGLCDEDTVRFTTENAKSCLEWLIDQGVEFDKEQSSKGESRYHLTREGGHSHRRI 127
Query: 200 VHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLL---TTLDGPDAVCHGVDTLNVET 256
+H+AD TG+ I+ L + V I +FE AIDL+ +T C G N T
Sbjct: 128 LHSADATGQAIQTTLADQVRQHSRIRIFERFNAIDLICQASTTGNQPKQCIGAYIWNRNT 187
Query: 257 QEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALA 316
++V ++ T+LA+GGA +Y T+NP VA+GDG+AMA RA ++NMEF QFHPT L
Sbjct: 188 EKVESIYAQKTILATGGASKVYQYTSNPDVASGDGIAMAWRAGCRVANMEFNQFHPTCL- 246
Query: 317 DEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQ 376
P +FL+TEA+RG+G L RFMP +DERAELAPRD+VAR+ID +
Sbjct: 247 -----FHPSA---GTFLLTEALRGEGAKLRRPDGSRFMPAFDERAELAPRDIVARAIDYE 298
Query: 377 LKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAG 436
+K+ + LDISHKP++ I HFP I + + G+DIT QPIP+VPAAHY CGGV
Sbjct: 299 MKRLGADCMYLDISHKPSDFIKQHFPTIYEKTMSLGIDITKQPIPIVPAAHYTCGGVMVD 358
Query: 437 LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSAS 496
QG+T++ LY GE++ TGLHGANRLASNSLLE LVFAR A + ++ L+
Sbjct: 359 HQGKTDISQLYAIGEMSYTGLHGANRLASNSLLECLVFARAAAIEIGETLVQSNHYLTLP 418
Query: 497 NWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEA 556
+W V + HN EL+ MW YVGIVR+T L+ A R++ L+
Sbjct: 419 HWDDSRVTDSDEEVVIQHNW--------HELRLFMWDYVGIVRTTKRLERALHRVELLQQ 470
Query: 557 EWETYLFEHGWEQTF-VGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENK 615
E E Y Q F V E+RNL A+L++ A+ R ESRGLHY +D+P +
Sbjct: 471 EIEDYY------QNFKVSNNLLELRNLVQVAELIIRCAMERKESRGLHYTLDYPDLLTTA 524
Query: 616 RLPTIILP 623
+ PTI+ P
Sbjct: 525 K-PTILSP 531
>TIGR_CMR|SO_1341 [details] [associations]
symbol:SO_1341 "L-aspartate oxidase" species:211586
"Shewanella oneidensis MR-1" [GO:0008734 "L-aspartate oxidase
activity" evidence=ISS] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=ISS] InterPro:IPR005288
InterPro:IPR013027 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737 GO:GO:0009435
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:1.20.58.100
SUPFAM:SSF46977 HOGENOM:HOG000160476 KO:K00278 OMA:GERCLGA
ProtClustDB:PRK09077 GO:GO:0008734 GO:GO:0044318 TIGRFAMs:TIGR00551
HSSP:P10902 RefSeq:NP_716961.1 ProteinModelPortal:Q8EH88 SMR:Q8EH88
GeneID:1169162 KEGG:son:SO_1341 PATRIC:23522336 Uniprot:Q8EH88
Length = 537
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 244/549 (44%), Positives = 317/549 (57%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
D VIGSG AGL AL +A+ V +++K E +T YAQGG+++V SD++ESH+ D
Sbjct: 10 DILVIGSGAAGLTLALHLAEKANVILLSKGPLSEGSTYYAQGGIASVFDESDTIESHVAD 69
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGE-------DGNLHLAREGGHSH 196
T+VAGA LCD + V ++ LI G +FD+ E D HL REGGHSH
Sbjct: 70 TLVAGAGLCDKDVVTFTAENAKSAMQWLIECGVAFDKEEAAGNNPKDAPYHLTREGGHSH 129
Query: 197 HRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT--LDGPDAVCHGVDTLNV 254
RI+HAAD TG+E++ L E + PNI V E + AIDL+TT L+ P G N
Sbjct: 130 RRILHAADATGKEVQTTLQERALDHPNIQVLERYNAIDLITTRKLNRPGNRVLGAYVWNR 189
Query: 255 ETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTA 314
++V +K LA+GG+ +Y T+NP VA+GDG+AMA RA ++NMEF QFHPT
Sbjct: 190 NAEQVETIKAKFVALATGGSSKVYQYTSNPDVASGDGIAMAWRAGCRVANMEFNQFHPTC 249
Query: 315 LADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSID 374
L +FL+TEA+RG+G L RFMP +DERAELAPRD+VAR+ID
Sbjct: 250 LYHADA---------RNFLLTEALRGEGAYLRRPDGSRFMPDFDERAELAPRDIVARAID 300
Query: 375 DQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVR 434
++K+ V LDISHK + ++ HFP I + CL+ G+DIT IPVVPAAHY CGGV
Sbjct: 301 YEMKRLGADCVYLDISHKDADFVMKHFPTIYSRCLELGIDITKDAIPVVPAAHYTCGGVM 360
Query: 435 AGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLS 494
L G+T++ GLY GEVA TGLHGANRLASNSLLE LVFAR A + +
Sbjct: 361 TDLHGQTDLNGLYAIGEVAYTGLHGANRLASNSLLECLVFARAASEDIESQLHKIPLPGL 420
Query: 495 ASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDEL 554
W V + HN EL+ MW YVGIVRS L+ A R L
Sbjct: 421 IPAWDESKVSNSDEEVVIAHNW--------HELRLFMWDYVGIVRSDKRLERALRRCLML 472
Query: 555 EAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEEN 614
+ E + Y + V E+RNL A+L++ A+ R ESRGLHY +D P ++
Sbjct: 473 QQEIQEY-----YSNFRVSNNLLELRNLVQVAELIIRCAMDRKESRGLHYNIDHPEKLDS 527
Query: 615 KRLPTIILP 623
LPTI+ P
Sbjct: 528 P-LPTILQP 535
>TIGR_CMR|CBU_0101 [details] [associations]
symbol:CBU_0101 "L-aspartate oxidase" species:227377
"Coxiella burnetii RSA 493" [GO:0008734 "L-aspartate oxidase
activity" evidence=ISS] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=ISS] InterPro:IPR005288
InterPro:IPR013027 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737 GO:GO:0009435
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:1.20.58.100
SUPFAM:SSF46977 HOGENOM:HOG000160476 KO:K00278 GO:GO:0008734
GO:GO:0044318 TIGRFAMs:TIGR00551 OMA:AMVYRAK HSSP:P10902
RefSeq:NP_819153.1 ProteinModelPortal:Q83F48 PRIDE:Q83F48
GeneID:1207973 KEGG:cbu:CBU_0101 PATRIC:17928885
ProtClustDB:CLSK913836 BioCyc:CBUR227377:GJ7S-106-MONOMER
Uniprot:Q83F48
Length = 536
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 240/529 (45%), Positives = 311/529 (58%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVL-CPSDSVESHM 141
+D VIGSG AGL AL +A VAV++K + ++ +AQGG++AV+ DSVE H+
Sbjct: 4 YDVLVIGSGAAGLGLALSLASEMRVAVLSKDDLTAGSSPHAQGGIAAVMNAADDSVELHV 63
Query: 142 QDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVH 201
QDT+ AG LCD E VR T+ + L+ G F N HL +EGGHS RI+H
Sbjct: 64 QDTLNAGGGLCDPEAVRATVTQAKSAVEWLVQQGVQFTTDSKNNYHLTQEGGHSRRRILH 123
Query: 202 AADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVR 261
AAD TG I + L E V+S PNI F H AIDLL + VC G + + E Q +R
Sbjct: 124 AADKTGAVIVKTLAEQVLSHPNIDCFTDHIAIDLLIE----NNVCKGAEVYDGEQQRSLR 179
Query: 262 FISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLP 321
F + T+LA+GGA Y T+NP +GDG+AMA RA ++N+EF QFHPT L P
Sbjct: 180 FHATHTVLATGGASFAYLHTSNPNRTSGDGIAMAWRAGCRVANLEFNQFHPTCLYH---P 236
Query: 322 IKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRN 381
+ N +LITE VRG+GG L +RFMP YD+RAE+APRD+VAR+ID +LKK N
Sbjct: 237 LA------NHYLITEVVRGEGGYLLLPDGKRFMPNYDDRAEMAPRDIVARAIDMELKKNN 290
Query: 382 EKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGET 441
+V LDISH+P + I FP I A CL +G D+T P+PVVPAAHY CGGV LQG+T
Sbjct: 291 WDHVYLDISHRPADFIKKAFPTIYATCLNFGFDMTEGPLPVVPAAHYTCGGVMTDLQGQT 350
Query: 442 NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTR 501
++ LY GEVA TGLHGANR+ASNSLLE LVFA + +I + + I A
Sbjct: 351 DMARLYAIGEVAYTGLHGANRMASNSLLECLVFAASCAR-AIK-RSAAPIPRLAEEAAHP 408
Query: 502 TVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY 561
S G R + +++ IMW +VGIVRS L A+ + +L +
Sbjct: 409 FFSLDSAG--KPREDSRTVDDFIHQVRKIMWDHVGIVRSDIRLIKAKNDLQKLLQQINVV 466
Query: 562 LFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPH 610
+ + E+RN+ A+LVV SAL R ESRGLHY VD+PH
Sbjct: 467 -----FPLQILSKSLIELRNVMTVAQLVVESALMRKESRGLHYNVDYPH 510
>UNIPROTKB|P10902 [details] [associations]
symbol:nadB species:83333 "Escherichia coli K-12"
[GO:0008734 "L-aspartate oxidase activity" evidence=IEA;IDA;IMP]
[GO:0044318 "L-aspartate:fumarate oxidoreductase activity"
evidence=IEA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0034628 "de novo NAD biosynthetic process from
aspartate" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR005288 InterPro:IPR013027 InterPro:IPR015939
Pfam:PF02910 PRINTS:PR00368 UniPathway:UPA00253 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005737 GO:GO:0050660 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:D64044
Gene3D:1.20.58.100 SUPFAM:SSF46977 EMBL:D13169 GO:GO:0034628
EMBL:X12714 PIR:E65035 RefSeq:NP_417069.1 RefSeq:YP_490802.1
PDB:1CHU PDB:1KNP PDB:1KNR PDBsum:1CHU PDBsum:1KNP PDBsum:1KNR
ProteinModelPortal:P10902 SMR:P10902 DIP:DIP-556N IntAct:P10902
PRIDE:P10902 EnsemblBacteria:EBESCT00000001699
EnsemblBacteria:EBESCT00000016256 GeneID:12934288 GeneID:947049
KEGG:ecj:Y75_p2527 KEGG:eco:b2574 PATRIC:32120547 EchoBASE:EB0625
EcoGene:EG10631 eggNOG:COG0029 HOGENOM:HOG000160476 KO:K00278
OMA:GERCLGA ProtClustDB:PRK09077
BioCyc:EcoCyc:L-ASPARTATE-OXID-MONOMER
BioCyc:ECOL316407:JW2558-MONOMER
BioCyc:MetaCyc:L-ASPARTATE-OXID-MONOMER EvolutionaryTrace:P10902
Genevestigator:P10902 GO:GO:0008734 GO:GO:0044318
TIGRFAMs:TIGR00551 Uniprot:P10902
Length = 540
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 241/552 (43%), Positives = 326/552 (59%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
D +IGSG AGL AL +A V V++K E +T YAQGG++AV +DS++SH++D
Sbjct: 10 DVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVED 69
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFD-----RGEDGNLHLAREGGHSHHR 198
T++AGA +CD V V + ++ LI G FD GE+ + HL REGGHSH R
Sbjct: 70 TLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEE-SYHLTREGGHSHRR 128
Query: 199 IVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT----LDGPDAVCHG-VDTLN 253
I+HAAD TGRE+E L+ ++ PNI V E A+DL+ + L G V V N
Sbjct: 129 ILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVVGAWVWNRN 188
Query: 254 VETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPT 313
ET E +K +LA+GGA +Y TTNP +++GDG+AMA RA ++N+EF QFHPT
Sbjct: 189 KETVETCH--AKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPT 246
Query: 314 ALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSI 373
AL P+ +FL+TEA+RG+G L RFMP +DER ELAPRD+VAR+I
Sbjct: 247 AL------YHPQA---RNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAI 297
Query: 374 DDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGV 433
D ++K+ + LDISHKP + I HFP I + L G+D+T +P+P+VPAAHY CGGV
Sbjct: 298 DHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCGGV 357
Query: 434 RAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDL 493
G T+V GLY GEV+ TGLHGANR+ASNSLLE LV+ A + I + + D+
Sbjct: 358 MVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAE-DITRRMPYAHDI 416
Query: 494 SASNWWTRTVVPK-SLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRID 552
S W + V + HN EL+ MW YVGIVR+T L+ A RI
Sbjct: 417 STLPPWDESRVENPDERVVIQHNW--------HELRLFMWDYVGIVRTTKRLERALRRIT 468
Query: 553 ELEAEWETYLFEHGWEQTF-VGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHV 611
L+ E + Y + H F V E+RNL A+L+V A+ R ESRGLH+ +D+P +
Sbjct: 469 MLQQEIDEY-YAH-----FRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPEL 522
Query: 612 EENKRLPTIILP 623
+ P+I+ P
Sbjct: 523 LTHSG-PSILSP 533
>TIGR_CMR|CHY_2373 [details] [associations]
symbol:CHY_2373 "L-aspartate oxidase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008734 "L-aspartate
oxidase activity" evidence=ISS] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=ISS] InterPro:IPR005288
InterPro:IPR013027 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737 GO:GO:0009435
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:1.20.58.100
SUPFAM:SSF46977 eggNOG:COG0029 HOGENOM:HOG000160476 KO:K00278
GO:GO:0008734 GO:GO:0044318 TIGRFAMs:TIGR00551 RefSeq:YP_361170.1
ProteinModelPortal:Q3A9L4 STRING:Q3A9L4 GeneID:3726508
KEGG:chy:CHY_2373 PATRIC:21277813 OMA:DPMPLAT
BioCyc:CHYD246194:GJCN-2372-MONOMER Uniprot:Q3A9L4
Length = 519
Score = 654 (235.3 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 149/297 (50%), Positives = 193/297 (64%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVL-CPSDSVESHMQ 142
D+ VIGSG+AGL AL A++G V V+TK ++NT+ AQGG++A + DS E H Q
Sbjct: 19 DYLVIGSGIAGLYAALNAARYGEVIVLTKKNLGDTNTDLAQGGIAAAVDTEEDSPELHYQ 78
Query: 143 DTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHA 202
DTI AGA LC+ E VRV+ +G +R+ L+ +GA F+R +DG L L EG H RI++
Sbjct: 79 DTIAAGAGLCNPEAVRVLVEDGIERVHHLVELGADFNR-KDGKLALRMEGAHRRRRILYR 137
Query: 203 ADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRF 262
D TG EI+R L AV + NI V E+HFA+DL+T D C G + E + F
Sbjct: 138 GDTTGEEIQRVLSAAVKNHSNIRVMENHFALDLITE----DRECLGALAWD-ENGNLRLF 192
Query: 263 ISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPI 322
+SK T+LA+GGAG ++ TTNP VATGDG+AMA+RA A + +MEF QFHPTAL LP
Sbjct: 193 LSKFTILATGGAGQVFRETTNPDVATGDGIAMAYRAGAGVMDMEFFQFHPTAL---NLPG 249
Query: 323 KPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKK 379
+ K FLI+EAVRG+G L N E FM Y E A+LAPRDVVAR+I DQ +K
Sbjct: 250 RQK------FLISEAVRGEGARLVNAAGEYFMKNYHELADLAPRDVVARAIWDQAQK 300
Score = 539 (194.8 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 135/284 (47%), Positives = 173/284 (60%)
Query: 262 FISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLP 321
F+SK T+LA+GGAG ++ TTNP VATGDG+AMA+RA A + +MEF QFHPTAL LP
Sbjct: 192 FLSKFTILATGGAGQVFRETTNPDVATGDGIAMAYRAGAGVMDMEFFQFHPTAL---NLP 248
Query: 322 IKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRN 381
+ K FLI+EAVRG+G L N E FM Y E A+LAPRDVVAR+I DQ +K
Sbjct: 249 GRQK------FLISEAVRGEGARLVNAAGEYFMKNYHELADLAPRDVVARAIWDQAQKGQ 302
Query: 382 EKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGET 441
V LDI T++ L+ P I + GLD IPV+PAAHY GGVR + GET
Sbjct: 303 ---VYLDI-RSFTDEQLAGIPRIVKTLKENGLDPRKDLIPVLPAAHYFMGGVRTNIWGET 358
Query: 442 NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTR 501
++ LY GEVAC G+HGANRLASNSLL+ LVF R V+ + + KST I+ + +
Sbjct: 359 DLARLYACGEVACQGVHGANRLASNSLLDGLVFGYRIVERTKNILKSTRINYPEISIYQ- 417
Query: 502 TVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQ 545
G N I R E +++ +MW GI+R+ L+
Sbjct: 418 -------GEN-REGIGAR--EAIAQIKDLMWENAGIIRNGQGLR 451
Score = 87 (35.7 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 521 KEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMR 580
+E +++ +MW GI+R+ L+ + +L+ + +E
Sbjct: 427 REAIAQIKDLMWENAGIIRNGQGLRVLLENLRKLKLSYPVK-----------NIEEAVAA 475
Query: 581 NLFCCAKLVVSSALARHESRGLHYMVDFPHVEE 613
NL+ A L+ +AL R ESRG H+ D+P ++
Sbjct: 476 NLYQTAILIALAALIREESRGAHFRSDYPQRDD 508
>TIGR_CMR|SPO_3244 [details] [associations]
symbol:SPO_3244 "L-aspartate oxidase, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008734 "L-aspartate
oxidase activity" evidence=ISS] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=ISS] InterPro:IPR015939 Pfam:PF02910
InterPro:IPR003953 Pfam:PF00890 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 Gene3D:1.20.58.100
SUPFAM:SSF46977 HOGENOM:HOG000160476 KO:K00278 RefSeq:YP_168447.1
ProteinModelPortal:Q5LNG1 GeneID:3195460 KEGG:sil:SPO3244
PATRIC:23379933 OMA:YHMGGVL ProtClustDB:PRK07512 Uniprot:Q5LNG1
Length = 516
Score = 646 (232.5 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 164/412 (39%), Positives = 223/412 (54%)
Query: 87 VIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIV 146
+IG+G+A + AL++A H + + H +++ +AQGGV+A + P+D+ E+H +DT+
Sbjct: 11 IIGAGLAAIYAALKLAPHPVLMISPDPLGHGASSAWAQGGVAAAMDPADTPEAHARDTLR 70
Query: 147 AGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHA-ADM 205
AGA E V I +L +G +FDR DG ++RE HS R+V D
Sbjct: 71 AGAGTVLQEVADYVTRAARAHILDLTDLGTAFDRTRDGGYVMSREAAHSAARVVRVKGDQ 130
Query: 206 TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK 265
G EI RAL+ + ++ V E LL VC + + E V +
Sbjct: 131 AGAEIMRALIAELRQTRSVQVLEGAQVTRLLVEAGRVSGVC--LTSAAPEGSAPVTLRAP 188
Query: 266 VTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPK 325
LLA+GGA +Y TTNP G + MA RA A I++ EFVQFHPTA+A P P
Sbjct: 189 AVLLAAGGAAGLYAQTTNPARIRGQALGMAARAGARIADGEFVQFHPTAIATGADPA-P- 246
Query: 326 KTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYV 385
L TEA+RG+G IL + +RFMP AELAPRDVVAR++ Q + N
Sbjct: 247 -------LATEALRGEGAILIDRHGQRFMPALHPDAELAPRDVVARAVYLQTQAGNAP-- 297
Query: 386 LLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRG 445
LD + + FP +A C + G+D S PIPV AAHY GGV A L G+ ++ G
Sbjct: 298 ALDTRAAIGAHLPTLFPAVAQACAEAGIDPLSAPIPVAAAAHYHMGGVAADLDGKCSLPG 357
Query: 446 LYVAGEVACTGLHGANRLASNSLLEALVFAR---RAVQPSIDHKKSTSIDLS 494
L+V GE A TGLHGANRLASN LLEALVFAR R + + + +D+S
Sbjct: 358 LWVCGEAASTGLHGANRLASNGLLEALVFARACARDIARQVRQTVAARVDIS 409
Score = 90 (36.7 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 526 ELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACE-MRNLFC 584
EL+ IM +VG+VR L+ A I ++E H C+ + N+
Sbjct: 424 ELRRIMTDHVGVVRDVDGLRRALRAIAQIEGA-------H---------PPCDALANMTA 467
Query: 585 CAKLVVSSALARHESRGLHYMVDFP 609
A ++ ++AL R ESRG HY DFP
Sbjct: 468 TATMIAAAALMRQESRGAHYRTDFP 492
>TIGR_CMR|CHY_0063 [details] [associations]
symbol:CHY_0063 "fumarate reductase, flavoprotein subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR013027
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG1053 GO:GO:0022900
GO:GO:0000104 HOGENOM:HOG000160475 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01812 KO:K00244
RefSeq:YP_358935.1 ProteinModelPortal:Q3AFZ9 STRING:Q3AFZ9
GeneID:3727845 KEGG:chy:CHY_0063 PATRIC:21273323 OMA:FRARTIV
ProtClustDB:CLSK2772342 BioCyc:CHYD246194:GJCN-63-MONOMER
Uniprot:Q3AFZ9
Length = 569
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 197/561 (35%), Positives = 281/561 (50%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTNYAQGGVSAVLC---PS 134
+KY D VIGSG AG+ AL AK G VA++TK P S T AQGG +A L S
Sbjct: 2 LKY-DVLVIGSGGAGMQAALVAAKSGELNVALMTKVFPTRSATCCAQGGTNAALRNVDKS 60
Query: 135 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGH 194
DS+E H DTI +L D + V + P+ I EL G F R EDG + GG
Sbjct: 61 DSIEKHAFDTIKGSDFLADQDAVEFFVSLLPETILELDYFGVPFSRLEDGTIAQRPFGGQ 120
Query: 195 SHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNV 254
SH R ++AD G + L E + + +++ F +DL+ ++ + GV +N+
Sbjct: 121 SHPRTCYSADKIGAVVLHTLYEQCLKN-QVNILTEWFLLDLV--VENEQII--GVVAMNM 175
Query: 255 ETQEVVRFISKVTLLASGGAGHIYPS-TTNPLVATGDGMAMAHRAQAVISNMEFVQFHPT 313
+T ++ ++K +LA+GGAG +Y + TTNP +TGDGMA A R + + EFVQFHPT
Sbjct: 176 KTGDIHPILAKAVVLATGGAGRVYWNRTTNPFASTGDGMAAAFRVGVALKDPEFVQFHPT 235
Query: 314 ALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERAELAPRDVVARS 372
LA G+ L++EA RG+GG L N ERFM Y E+ ELA RD+V+++
Sbjct: 236 GLAGTGI------------LMSEACRGEGGYLLNNKGERFMQRYAPEKMELATRDLVSQA 283
Query: 373 IDDQLKKRN------EKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPA 425
I+ ++K+ YVLLD+ H EKIL P I +++ G+D QPIPV P+
Sbjct: 284 IETEIKEGRGFGEGINAYVLLDLRHLGREKILERLPQIRELAIQFEGIDPIEQPIPVRPS 343
Query: 426 AHYMCGGVRA--GLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSI 483
HY GG+ T V+GLY AGE +C +HGANRL NS EA+ F + A + +
Sbjct: 344 CHYSMGGIDVIDYKTCATVVKGLYAAGECSCISIHGANRLGGNSTAEAVAFGKVAGKAAA 403
Query: 484 DHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTS 543
++ ++ V +R L MW VG+ R
Sbjct: 404 EYAQNVGFSSEKKVSECAKKWENEYNIAVSRTNGPSVASIRSRLAETMWLNVGVFRKEKE 463
Query: 544 LQTAEWRIDELEAEWETYLFEHGWEQTF--VGLEACEMRNLFCCAKLVVSSALARHESRG 601
+ A +D L E++ Y + + + E+ N+ AK +V AL R ESRG
Sbjct: 464 MLQAAKDVDALIEEYK-YCVVGDKNRIYNTAFTQYIELGNMLTVAKAIVIGALNRRESRG 522
Query: 602 LHYMVDFPHVEENKRLP-TII 621
H D+P ++ L TII
Sbjct: 523 SHKREDYPQRDDKNYLKHTII 543
>TIGR_CMR|CHY_1373 [details] [associations]
symbol:CHY_1373 "fumarate reductase, flavoprotein subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR013027
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG1053 GO:GO:0022900
GO:GO:0016627 HOGENOM:HOG000160475 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01812 KO:K00239
RefSeq:YP_360205.1 ProteinModelPortal:Q3ACC9 STRING:Q3ACC9
GeneID:3727233 KEGG:chy:CHY_1373 PATRIC:21275879
ProtClustDB:PRK06069 BioCyc:CHYD246194:GJCN-1372-MONOMER
Uniprot:Q3ACC9
Length = 572
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 199/562 (35%), Positives = 285/562 (50%)
Query: 77 DGSVKYFDFSVIGSGVAGLCYALEVA--KHGT--VAVITKAEPHESNTNYAQGGVSAVLC 132
D +V D +IGSG+AGL ALE A G +A+++K + ++ A+GG A L
Sbjct: 2 DVNVLKHDLIIIGSGLAGLRAALEAAFLSKGELDIALVSKTQLLRPHSVCAEGGTGAALR 61
Query: 133 --PSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAR 190
DS E H DT+ +L D + V P I +L G + R E+G +
Sbjct: 62 IDEGDSPELHAWDTVKGSDFLADQDAVWRFVELIPQEILKLDHWGIPWARRENGKIDQRP 121
Query: 191 EGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
GGHS R V AAD TG + + + N+ H + ++T+L D G
Sbjct: 122 FGGHSFPRAVFAADKTGFFEVHTMYDNLQRFSNV----HRYDEVMVTSLLIEDGEYRGFT 177
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
+++ E + F SK ++A+GGA IY TT TGDGMA+A+RA + +MEFVQF
Sbjct: 178 AIDLTRGEFLVFQSKALIIATGGACRIYGFTTYSYTVTGDGMAIAYRAGLPLKDMEFVQF 237
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYN-LGMERFMPLYDERA-ELAPRDV 368
HPT L G+ LITEA RG+GG L N LG ERFM Y E+ ELAPRD+
Sbjct: 238 HPTGLVPSGI------------LITEAARGEGGYLINNLG-ERFMGKYAEKMMELAPRDI 284
Query: 369 VARSIDDQLKK-----RNE--KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPI 420
V+RS +++ R + YVLLD++H EKI P I +K+ G+D +P+
Sbjct: 285 VSRSEMQEIEAGRGFTREDGLDYVLLDLTHLGREKINERLPLIREVAIKFAGIDPIEKPL 344
Query: 421 PVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQ 480
PV P AHY GG+ + G+T V G+Y AGEVAC +HGANRL +NS E LV+
Sbjct: 345 PVRPVAHYSMGGIHVDIDGQTPVPGVYAAGEVACVSIHGANRLGTNSTAECLVWGGITGG 404
Query: 481 PSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKE----VRKELQSIMWRYVG 536
+ ++ K + T V+ + N + N + KE +RKEL+ IM + VG
Sbjct: 405 KAYEYVKKQK---AFPKLPTEMVLREEARINEIFN--KPNKESLYTIRKELREIMDKNVG 459
Query: 537 IVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEA-CEMRNLFCCAKLVVSSALA 595
+ R L A ++ EL ++ E + L + EM N+ A+++V AL
Sbjct: 460 VYRDEKGLTAALNKVRELIQRFKDCGLEDKSKYYNTDLVSYLEMENMLTLAEIIVLGALE 519
Query: 596 RHESRGLHYMVDFPHVEENKRL 617
R ESRG H D+P+ ++ L
Sbjct: 520 RKESRGGHARRDYPNRDDENWL 541
>TAIR|locus:2173654 [details] [associations]
symbol:SDH1-1 "succinate dehydrogenase 1-1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000104
"succinate dehydrogenase activity" evidence=TAS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS;IDA]
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=TAS] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0050897 "cobalt ion
binding" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0050660
eggNOG:COG1053 GO:GO:0006099 GO:GO:0050897 GO:GO:0015036
EMBL:AB018119 GO:GO:0005749 GO:GO:0000104 GO:GO:0006121
EMBL:AJ001809 EMBL:AF367341 EMBL:AY045674 EMBL:AF436833
EMBL:AY124812 IPI:IPI00533552 PIR:T51815 RefSeq:NP_201477.1
UniGene:At.22655 UniGene:At.67108 ProteinModelPortal:O82663
SMR:O82663 IntAct:O82663 STRING:O82663 PaxDb:O82663 PRIDE:O82663
EnsemblPlants:AT5G66760.1 GeneID:836809 KEGG:ath:AT5G66760
GeneFarm:2175 TAIR:At5g66760 HOGENOM:HOG000160475 InParanoid:O82663
KO:K00234 OMA:CFTADAT PhylomeDB:O82663 ProtClustDB:PLN00128
BioCyc:ARA:AT5G66760-MONOMER BioCyc:MetaCyc:AT5G66760-MONOMER
Genevestigator:O82663 GermOnline:AT5G66760 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 Uniprot:O82663
Length = 634
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 193/569 (33%), Positives = 281/569 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A+ +++HG A ITK P S+T AQGG++A L D
Sbjct: 50 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRW 109
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
HM DT+ +L D + ++ +C E P + EL G F R E+G ++ GG S
Sbjct: 110 HMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFG 169
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
+R AAD TG + L + N F +FA+DLL DG C GV
Sbjct: 170 KGGQAYRCACAADRTGHALLHTLYGQAMKH-NTQFFVEYFALDLLMASDGS---CQGVIA 225
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
LN+E + RF S T+LA+GG G Y S T+ TGDG AM RA + ++EFVQFH
Sbjct: 226 LNMEDGTLHRFRSSQTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFH 285
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 286 PTGIYGAGC------------LITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 333
Query: 371 RSIDDQLKKR-----NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ ++ ++ L ++H P E + P I+ + G+D+T +PIPV+P
Sbjct: 334 RSMTMEIREGRGVGPHKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLP 393
Query: 425 AAHYMCGGVRAGLQGETN----------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GG+ GE + GL AGE AC +HGANRL +NSLL+ +VF
Sbjct: 394 TVHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVF 453
Query: 475 AR----RAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSI 530
R R + S +K ++ A +T+ N ++ T +R +Q I
Sbjct: 454 GRACANRVAEISKPGEKQKPLEKDAGE---KTIAWLDRLRNSNGSL--PTSTIRLNMQRI 508
Query: 531 MWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVG----LEACEMRNLFCCA 586
M + R+ +L+ ID+ WE++ +++ + +E E+ NL A
Sbjct: 509 MQNNAAVFRTQETLEEGCQLIDKA---WESFGDVQVKDRSMIWNSDLIETLELENLLINA 565
Query: 587 KLVVSSALARHESRGLHYMVDFPHVEENK 615
+ + SA AR ESRG H DF E+ +
Sbjct: 566 SITMHSAEARKESRGAHAREDFTKREDGE 594
>UNIPROTKB|P0AC41 [details] [associations]
symbol:sdhA species:83333 "Escherichia coli K-12"
[GO:0045282 "plasma membrane succinate dehydrogenase complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA;IMP]
[GO:0009055 "electron carrier activity" evidence=IGI;IDA]
[GO:0055114 "oxidation-reduction process" evidence=IGI] [GO:0009060
"aerobic respiration" evidence=IEP;IGI] [GO:0006099 "tricarboxylic
acid cycle" evidence=IEA;IGI] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA;IDA;IPI] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR013027 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PRINTS:PR00368 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 Pfam:PF00890 GO:GO:0009055 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1053 GO:GO:0006099 GO:GO:0022900
GO:GO:0000104 EMBL:J01619 EMBL:X00980 HOGENOM:HOG000160475
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 KO:K00239 OMA:VGCTAID
EMBL:X01070 PIR:B64808 RefSeq:NP_415251.1 RefSeq:YP_489003.1
PDB:1NEK PDB:1NEN PDB:2ACZ PDB:2AD0 PDB:2WDQ PDB:2WDR PDB:2WDV
PDB:2WP9 PDB:2WS3 PDB:2WU2 PDB:2WU5 PDBsum:1NEK PDBsum:1NEN
PDBsum:2ACZ PDBsum:2AD0 PDBsum:2WDQ PDBsum:2WDR PDBsum:2WDV
PDBsum:2WP9 PDBsum:2WS3 PDBsum:2WU2 PDBsum:2WU5
ProteinModelPortal:P0AC41 SMR:P0AC41 IntAct:P0AC41
SWISS-2DPAGE:P0AC41 PaxDb:P0AC41 PRIDE:P0AC41
EnsemblBacteria:EBESCT00000001156 EnsemblBacteria:EBESCT00000018021
EnsemblBacteria:EBESCT00000232603 GeneID:12933913 GeneID:945402
KEGG:ecj:Y75_p0703 KEGG:eco:b0723 PATRIC:32116641 EchoBASE:EB0924
EcoGene:EG10931 ProtClustDB:PRK08958 BioCyc:EcoCyc:SDH-FLAVO
BioCyc:ECOL316407:JW0713-MONOMER BioCyc:MetaCyc:SDH-FLAVO
EvolutionaryTrace:P0AC41 Genevestigator:P0AC41 GO:GO:0045282
Uniprot:P0AC41
Length = 588
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 203/586 (34%), Positives = 292/586 (49%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDS 136
V+ FD VIG+G AG+ AL++++ G T A+++K P S+T AQGG++ L D+
Sbjct: 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDN 64
Query: 137 VESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH 196
E HM DT+ Y+ D + + +C GP+ I EL +G F R +DG ++ GG S
Sbjct: 65 WEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSK 124
Query: 197 H-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
+ R AAD TG + L + + + + ++F +A+DL+ DG AV G
Sbjct: 125 NFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDG--AVV-GC 180
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 309
L +ET EVV F ++ T+LA+GGAG IY STTN + TGDG+ MA RA + +ME Q
Sbjct: 181 TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ 240
Query: 310 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDV 368
FHPT +A G+ L+TE RG+GG L N ERFM Y A +LA RDV
Sbjct: 241 FHPTGIAGAGV------------LVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDV 288
Query: 369 VARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKYG-LDITSQPIP 421
VARSI ++++ + L + H E + S P I + +D +PIP
Sbjct: 289 VARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIP 348
Query: 422 VVPAAHYMCGGVRAGLQGET---N-------VRGLYVAGEVACTGLHGANRLASNSLLEA 471
V+P HYM GG+ + G+ N V GL+ GE+AC +HGANRL NSLL+
Sbjct: 349 VIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDL 408
Query: 472 LVFARRA---VQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKE---VRK 525
+VF R A +Q SI + + D S S+ V SL N R ++ +RK
Sbjct: 409 VVFGRAAGLHLQESIAEQGALR-DASESD------VEASLDRLNRWNNNRNGEDPVAIRK 461
Query: 526 ELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHGWEQTFVGLEACEMRNLFC 584
LQ M + R ++ ++ + + L + E +E E+ NL
Sbjct: 462 ALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLME 521
Query: 585 CAKLVVSSALARHESRGLHYMVDFP-HVEENKRLPTIILPSLVNCT 629
A SA R ESRG H DFP +EN ++ LP + T
Sbjct: 522 TAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMT 567
>UNIPROTKB|O53370 [details] [associations]
symbol:sdhA "PROBABLE SUCCINATE DEHYDROGENASE (FLAVOPROTEIN
SUBUNIT) SDHA (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE)
(FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE)" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005829 GO:GO:0005886 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0050660 GO:GO:0006099 GO:GO:0022900
EMBL:BX842582 GO:GO:0000104 GO:GO:0016627 HOGENOM:HOG000160475
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 KO:K00239 OMA:VGCTAID
HSSP:P10444 EMBL:CP003248 PIR:E70843 RefSeq:NP_217835.1
RefSeq:NP_337947.1 RefSeq:YP_006516797.1 SMR:O53370
EnsemblBacteria:EBMYCT00000003638 EnsemblBacteria:EBMYCT00000070958
GeneID:13318143 GeneID:887639 GeneID:926316 KEGG:mtc:MT3419
KEGG:mtu:Rv3318 KEGG:mtv:RVBD_3318 PATRIC:18129268
TubercuList:Rv3318 ProtClustDB:PRK08205 Uniprot:O53370
Length = 590
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 188/555 (33%), Positives = 282/555 (50%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLC--PSDSVESH 140
+D ++G+G AG+ A+E AV+TK P S+T AQGG+ A L D+ E H
Sbjct: 7 YDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEDDNWEWH 66
Query: 141 MQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH-H-- 197
DT+ G YL D + V ++C E D + +L +G F+R +G + R GGH+ H
Sbjct: 67 TFDTVKGGDYLADQDAVEIMCKEAIDAVLDLEKMGMPFNRTPEGRIDQRRFGGHTRDHGK 126
Query: 198 ----RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLN 253
R +AAD TG I + L + V ++ F +A+DL T V GV
Sbjct: 127 APVRRACYAADRTGHMILQTLYQNCVKH-DVEFFNEFYALDLALTQTPSGPVATGVIAYE 185
Query: 254 VETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPT 313
+ T ++ F +K ++A+GG+G +Y +T+N TGDG+ + R + +MEF QFHPT
Sbjct: 186 LATGDIHVFHAKAVVIATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPT 245
Query: 314 ALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVARS 372
LA GL I LI+EAVRG+GG L N ERFM Y +LAPRD+VARS
Sbjct: 246 GLA--GLGI----------LISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARS 293
Query: 373 -IDDQLKKRN----EKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAA 426
+ + L+ R + YV +D+ H E + + P+I Y G+D ++ +PV P
Sbjct: 294 MVLEVLEGRGAGPLKDYVYIDVRHLGEEVLEAKLPDITEFARTYLGVDPVTELVPVYPTC 353
Query: 427 HYMCGGVRAGLQGET---N---VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQ 480
HY+ GG+ + G+ N V GLY AGE AC +HGANRL +NSLL+ VF RRA
Sbjct: 354 HYLMGGIPTTVTGQVLRDNTSVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGI 413
Query: 481 PSIDHKKSTS-IDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVR 539
+ + + +D+ + +V + + + R ++R LQ M + R
Sbjct: 414 AAASYAQGHDFVDMPPN---PEAMVVGWVSDILSEHGNERVADIRGALQQSMDNNAAVFR 470
Query: 540 STTSLQTAEWRIDELEAEWETY-LFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHE 598
+ +L+ A I L+ + + + G LEA E+ L A++ V AL R E
Sbjct: 471 TEETLKQALTDIHALKERYSRITVHDKGKRFNTDLLEAIELGFLLELAEVTVVGALNRKE 530
Query: 599 SRGLHYMVDFPHVEE 613
SRG H D+P+ ++
Sbjct: 531 SRGGHAREDYPNRDD 545
>POMBASE|SPAC1556.02c [details] [associations]
symbol:sdh1 "succinate dehydrogenase Sdh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0006105 "succinate
metabolic process" evidence=IC] [GO:0006121 "mitochondrial electron
transport, succinate to ubiquinone" evidence=ISS] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=ISS]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISM]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 PomBase:SPAC1556.02c Pfam:PF00890 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0050660 eggNOG:COG1053
GO:GO:0006099 GO:GO:0005749 GO:GO:0006121 HOGENOM:HOG000160475
KO:K00234 OMA:CFTADAT GO:GO:0008177 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 GO:GO:0006105 EMBL:D89263 PIR:T50081
RefSeq:NP_594319.1 ProteinModelPortal:Q9UTJ7 SMR:Q9UTJ7
STRING:Q9UTJ7 PRIDE:Q9UTJ7 EnsemblFungi:SPAC1556.02c.1
GeneID:2541690 KEGG:spo:SPAC1556.02c OrthoDB:EOG41G6C9
NextBio:20802783 Uniprot:Q9UTJ7
Length = 641
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 196/579 (33%), Positives = 281/579 (48%)
Query: 79 SVKY------FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL 131
SVKY +D V+G+G AGL +A+ G A ITK P S+T AQGG++A L
Sbjct: 45 SVKYPVIDHTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAAL 104
Query: 132 --CPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLA 189
D H DT+ +L D + + + E P + EL G F R ++G ++
Sbjct: 105 GNMTKDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQR 164
Query: 190 REGGHS--------HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG 241
GG S +R AD TG I L + N + F +FA+DL+ ++G
Sbjct: 165 AFGGQSLEYGKGGQAYRCAAVADRTGHSILHTLYGQSLKH-NTNFFIEYFAMDLI--MEG 221
Query: 242 PDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAV 301
+ C GV +N+E + RF + T+LA+GG G Y S T+ TGDG AM RA
Sbjct: 222 GE--CRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLP 279
Query: 302 ISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA 361
+ ++EFVQFHPT + G LITE RG+GG L N ERFM Y A
Sbjct: 280 LQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGYLLNSKGERFMERYAPTA 327
Query: 362 -ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLD 414
+LA RDVV+R++ ++++ EK + L +SH P E + P I+ + G+D
Sbjct: 328 KDLASRDVVSRAMTVEIREGRGVGPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVD 387
Query: 415 ITSQPIPVVPAAHYMCGGVRAGLQGET-----N-----VRGLYVAGEVACTGLHGANRLA 464
+T +PIPV+P HY GG+ GE N V GLY AGE AC +HG NRL
Sbjct: 388 VTKEPIPVLPTVHYNMGGIPTRFTGEVLTIDENGKDKIVPGLYAAGEAACVSVHGGNRLG 447
Query: 465 SNSLLEALVFARRA-------VQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNIL 517
+NSLL+ +VF R ++P+ HK + D + + S G
Sbjct: 448 ANSLLDIVVFGRACALHIKDTLEPNTPHKPLAA-DAGLDSLKFLDQIRTSQGP------- 499
Query: 518 RRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGL 574
+ T E+R ++Q M R V + R +LQ I ++ ++ + + G W V
Sbjct: 500 KHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLV-- 557
Query: 575 EACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEE 613
EA E+RNL CA ++AL R ESRG H D+P ++
Sbjct: 558 EALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDD 596
>DICTYBASE|DDB_G0280535 [details] [associations]
symbol:sdhA "succinate dehydrogenase (ubiquinone)"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0046956 "positive phototaxis"
evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0016627 "oxidoreductase activity, acting on the CH-CH group of
donors" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0006121 "mitochondrial electron
transport, succinate to ubiquinone" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IEA;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 dictyBase:DDB_G0280535 Pfam:PF00890
GO:GO:0045335 GenomeReviews:CM000152_GR GO:GO:0050660
eggNOG:COG1053 GO:GO:0006099 EMBL:AAFI02000037 GO:GO:0046956
GO:GO:0005749 GO:GO:0006121 KO:K00234 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 HSSP:P0AC41 OMA:VGCTAID
EMBL:AF211482 RefSeq:XP_641069.1 ProteinModelPortal:Q9U3X4
SMR:Q9U3X4 STRING:Q9U3X4 PRIDE:Q9U3X4 EnsemblProtists:DDB0214886
GeneID:8622627 KEGG:ddi:DDB_G0280535 ProtClustDB:PTZ00139
Uniprot:Q9U3X4
Length = 626
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 197/559 (35%), Positives = 274/559 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL AL + + G A ITK P S+T AQGG++A L D
Sbjct: 40 YDAIVVGAGGAGLRAALGLTEKGYKTACITKLFPTRSHTVAAQGGINAALGNADQDDWRW 99
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-- 197
H DT+ +L D + + +C E + EL G F R +DG ++ GG S +
Sbjct: 100 HAYDTVKGSDFLGDQDAIHYMCKEAVPTVLELEQYGVPFSRMDDGRIYQRAFGGQSKNFG 159
Query: 198 ------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
R AAD TG + L V N F +F DL+ ++ D C GV
Sbjct: 160 KGGQATRCCAAADRTGHALLHTLYGQAVKH-NTKFFIEYFVTDLI--MENGD--CRGVVA 214
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
+N+E + RF S T++A+GG G Y S T+ TGDG AM RA ++EFVQFH
Sbjct: 215 INLEDGTIHRFRSHATVIATGGYGRAYFSATSAHTCTGDGNAMVIRAGLPCQDLEFVQFH 274
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-AELAPRDVVA 370
PT + G LITE RG+GG L N ERFMP Y A+LA RDVV+
Sbjct: 275 PTGIYGSGC------------LITEGARGEGGYLLNSSGERFMPRYAPSVADLASRDVVS 322
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS ++++ EK + LL+++H E I P I + + G+D+T +PIPV+P
Sbjct: 323 RSETMEIREGRGVGPEKDHCLLNLTHLSPEIIDERLPGIRETAMIFAGVDVTKEPIPVIP 382
Query: 425 AAHYMCGGVRAGLQGE--TNV-------RGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ T V +GLY AGE AC +HGANRL +NSLL+ +VF
Sbjct: 383 TVHYNMGGIPTNYKGQVITQVDGKDKLVKGLYAAGESACVSVHGANRLGANSLLDIVVFG 442
Query: 476 RRAVQPSIDHK--KSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWR 533
R AV I++ K T N ++ ++ N R T E+R E+Q IM R
Sbjct: 443 R-AVANEIENTLAKDTPHKPLPPNAGEESIA--NIDAIRFSNGTRSTAEIRLEMQKIMQR 499
Query: 534 YVGIVRSTTSLQTAEWRIDE----LEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLV 589
+ R L+ ID+ L + +T W + E+ E++NL A L
Sbjct: 500 NAAVFRDGQVLKEGVELIDKCARSLINDLKTTDRTMIWNTDLI--ESLELQNLMTQAVLT 557
Query: 590 VSSALARHESRGLHYMVDF 608
+ SA AR ESRG H D+
Sbjct: 558 MHSAEARKESRGAHAREDY 576
>UNIPROTKB|P64174 [details] [associations]
symbol:frdA "Fumarate reductase flavoprotein subunit"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR003952 InterPro:IPR005884
InterPro:IPR013027 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PRINTS:PR00368 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0050660 eggNOG:COG1053
GO:GO:0022900 EMBL:BX842577 GO:GO:0009061 GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01812 KO:K00244 ProtClustDB:PRK09231
TIGRFAMs:TIGR01176 PIR:E70762 RefSeq:NP_216068.1 RefSeq:NP_336056.1
RefSeq:YP_006514941.1 ProteinModelPortal:P64174 SMR:P64174
PRIDE:P64174 EnsemblBacteria:EBMYCT00000001531
EnsemblBacteria:EBMYCT00000072929 GeneID:13316330 GeneID:886376
GeneID:924332 KEGG:mtc:MT1603 KEGG:mtu:Rv1552 KEGG:mtv:RVBD_1552
PATRIC:18125294 TubercuList:Rv1552 OMA:GRIYNME Uniprot:P64174
Length = 583
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 189/557 (33%), Positives = 277/557 (49%)
Query: 87 VIGSGVAGLCYALEVAK---HGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
VIG G AGL A+ +A+ H VA+++K P S+T A+GG +AV DS++ H D
Sbjct: 9 VIGGGGAGLRAAIAIAETNPHLDVAIVSKVYPMRSHTVSAEGGAAAVTGDDDSLDEHAHD 68
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAA 203
T+ G +LCD + V E P + +L G + R DG + + GG R AA
Sbjct: 69 TVSGGDWLCDQDAVEAFVAEAPKELVQLEHWGCPWSRKPDGRVAVRPFGGMKKLRTWFAA 128
Query: 204 DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFI 263
D TG + L + +++ ++ ++ FA LL DG VC G+ + + T + +
Sbjct: 129 DKTGFHLLHTLFQRLLTYSDVMRYDEWFATTLLVD-DG--RVC-GLVAIELATGRIETIL 184
Query: 264 SKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIK 323
+ +L +GG G ++P TTN + TGDGMA+A RA A + +MEFVQ+HPT GLP
Sbjct: 185 ADAVILCTGGCGRVFPFTTNANIKTGDGMALAFRAGAPLKDMEFVQYHPT-----GLPF- 238
Query: 324 PKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD----------ERAELAPRDVVARS- 372
LITEA R +GG L N R++ YD EL PRD ++++
Sbjct: 239 ------TGILITEAARAEGGWLLNKDGYRYLQDYDLGKPTPEPRLRSMELGPRDRLSQAF 292
Query: 373 IDDQLKKR--NEKY---VLLDISHKPTEKILSHFPNIAAECLKYG-LDITSQPIPVVPAA 426
+ + K R + Y V LD+ H + I + P + C Y +D + +PV P
Sbjct: 293 VHEHNKGRTVDTPYGPVVYLDLRHLGADLIDAKLPFVRELCRDYQHIDPVVELVPVRPVV 352
Query: 427 HYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSID-- 484
HYM GGV + G T + GLY AGE AC ++GANRL SNSL E LVF RA + + D
Sbjct: 353 HYMMGGVHTDINGATTLPGLYAAGETACVSINGANRLGSNSLPELLVFGARAGRAAADYA 412
Query: 485 --HKKSTSIDLSASNWWTRTV---VPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVR 539
H+KS SA RT + + L + R ++R ++Q+ + GI R
Sbjct: 413 ARHQKSDRGPSSAVRAQARTEALRLERELSRHGQGG--ERIADIRADMQATLESAAGIYR 470
Query: 540 STTSLQTAEWRIDELEAEWETY-LFEHGWEQTF-VGLEAC-EMRNLFCCAKLVVSSALAR 596
+L A I L+ + T + +H +TF L A E+ + A +V S L R
Sbjct: 471 DGPTLTKAVEEIRVLQERFATAGIDDHS--RTFNTELTALLELSGMLDVALAIVESGLRR 528
Query: 597 HESRGLHYMVDFPHVEE 613
ESRG H DFP+ ++
Sbjct: 529 EESRGAHQRTDFPNRDD 545
>TIGR_CMR|SO_1928 [details] [associations]
symbol:SO_1928 "succinate dehydrogenase, flavoprotein
subunit" species:211586 "Shewanella oneidensis MR-1" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
GO:GO:0050660 GO:GO:0006099 GO:GO:0022900 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000160475 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 KO:K00239 OMA:VGCTAID
ProtClustDB:PRK08958 HSSP:P10444 RefSeq:NP_717535.1
ProteinModelPortal:Q8EFP2 SMR:Q8EFP2 GeneID:1169690
KEGG:son:SO_1928 PATRIC:23523489 Uniprot:Q8EFP2
Length = 588
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 195/597 (32%), Positives = 290/597 (48%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDS 136
V+ FD VIG+G AG+ AL+++K G + A+++K P S+T AQGG++ L D
Sbjct: 5 VREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNAHEDH 64
Query: 137 VESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH 196
E HM DT+ ++ D + + +C GP+ I EL +G F R ++G ++ GG S
Sbjct: 65 WEQHMYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFGGQSK 124
Query: 197 H-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
+ R AAD TG + L + V VF +A+DL+ DG C +
Sbjct: 125 NFGGEQAARTAAAADRTGHALLHCLYQQNVKHKT-QVFSEWYALDLVKNQDGAIVGCTAI 183
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 309
+ +ET E+V F +K T+LA+GGAG IY STTN + TGDG+ MA RA + +ME Q
Sbjct: 184 E---IETGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ 240
Query: 310 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDV 368
FHPT +A G+ L+TE RG+GG L N ERFM Y A +LA RDV
Sbjct: 241 FHPTGIAGAGV------------LVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDV 288
Query: 369 VARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKYG-LDITSQPIP 421
VARS+ ++++ + LL + H E + + P + + +D PIP
Sbjct: 289 VARSMMTEIREGRGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIP 348
Query: 422 VVPAAHYMCGG---------VRAGLQG-ETNVRGLYVAGEVACTGLHGANRLASNSLLEA 471
V+P HYM GG +R G E +V GL+ GE+AC +HGANRL NSLL+
Sbjct: 349 VLPTCHYMMGGLPTKVSGQVIRKNTDGTEQDVVGLFAVGEIACVSVHGANRLGGNSLLDL 408
Query: 472 LVFAR-------RAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVR 524
+VF R +A+ + D K +T D+ AS + G + + ++R
Sbjct: 409 VVFGRAAGQHLGKALDETADPKDATDADIQASLARLQRWESNKDGEDPV--------QIR 460
Query: 525 KELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHGWEQTFVGLEACEMRNLF 583
K+LQ M + R ++ ++ + E L ++ E +E E+ NL
Sbjct: 461 KDLQLCMQLNFSVFRRGDAMAEGLEQLKAIRKRLENAKLSDNSREFNTQRIECLELDNLM 520
Query: 584 CCAKLVVSSALARHESRGLHYMVDF-PHVEENKRLPTIILPSLVNCTWSSRQLHKLP 639
A +A R ESRG H D+ +EN ++ P V T R ++ P
Sbjct: 521 ATAIATAYAANFRTESRGAHSREDYLERDDENWLCHSLFDP--VTETMDRRAVNMAP 575
>TAIR|locus:2062146 [details] [associations]
symbol:SDH1-2 "succinate dehydrogenase 1-2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000104
"succinate dehydrogenase activity" evidence=TAS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=TAS] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
UniPathway:UPA00223 InterPro:IPR003953 Pfam:PF00890 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0050660 eggNOG:COG1053
GO:GO:0006099 GO:GO:0015036 EMBL:AC006439 GO:GO:0005749
GO:GO:0000104 GO:GO:0006121 HOGENOM:HOG000160475 KO:K00234
ProtClustDB:PLN00128 GO:GO:0008177 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 EMBL:AK119142 EMBL:BT005938 IPI:IPI00527700
PIR:D84564 RefSeq:NP_179435.1 UniGene:At.39995
ProteinModelPortal:Q9ZPX5 SMR:Q9ZPX5 STRING:Q9ZPX5 PRIDE:Q9ZPX5
EnsemblPlants:AT2G18450.1 GeneID:816359 KEGG:ath:AT2G18450
GeneFarm:2186 TAIR:At2g18450 InParanoid:Q9ZPX5 OMA:YNTTSND
PhylomeDB:Q9ZPX5 Genevestigator:Q9ZPX5 GermOnline:AT2G18450
Uniprot:Q9ZPX5
Length = 632
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 187/559 (33%), Positives = 274/559 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A+ +++HG A ITK P S+T AQGG++A L D
Sbjct: 48 YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSVDDWRW 107
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
HM DT+ +L D + ++ +C E P + EL G F R EDG ++ GG S
Sbjct: 108 HMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLEFG 167
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
+R AAD TG + L + N F +FA+DL+ DG C GV
Sbjct: 168 IGGQAYRCACAADRTGHALLHTLYGQAMKH-NTQFFVEYFALDLIMNSDG---TCQGVIA 223
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
LN+E + RF + T+LA+GG G Y S T+ TGDG AM RA + ++EFVQFH
Sbjct: 224 LNMEDGTLHRFHAGSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFH 283
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N E+FM Y A +LA RDVV+
Sbjct: 284 PTGIYGAGC------------LITEGARGEGGILRNSEGEKFMDRYAPTARDLASRDVVS 331
Query: 371 RSIDDQLKKRN-----EKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ + Y+ L ++H P E + P I+ + G+D+T +PIPV+P
Sbjct: 332 RSMTMEIRQGRGAGPMKDYLYLYLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLP 391
Query: 425 AAHYMCGGVRAGLQGETN----------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GG+ GE V GL AGE AC +HGANRL +NSLL+ +VF
Sbjct: 392 TVHYNMGGIPTNYHGEVITLRGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVF 451
Query: 475 ARRAVQPSID-HKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWR 533
R + K + + +++ + L N T ++R +Q +M
Sbjct: 452 GRACANRVAEIQKPGEKLKPLEKDAGEKSI--EWLDRIRNSNGSLPTSKIRLNMQRVMQN 509
Query: 534 YVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVG----LEACEMRNLFCCAKLV 589
+ R+ +T E D ++ W+++ +++ + +E E+ NL A +
Sbjct: 510 NAAVFRTQ---ETLEEGCDLIDKTWDSFGDVKVTDRSMIWNSDLIETMELENLLVNACIT 566
Query: 590 VSSALARHESRGLHYMVDF 608
+ SA AR ESRG H DF
Sbjct: 567 MHSAEARKESRGAHAREDF 585
>UNIPROTKB|G4NE44 [details] [associations]
symbol:MGG_00168 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005739 EMBL:CM001235
GO:GO:0050660 GO:GO:0006099 GO:GO:0022900 KO:K00234 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 RefSeq:XP_003718957.1
ProteinModelPortal:G4NE44 EnsemblFungi:MGG_00168T0 GeneID:2674646
KEGG:mgr:MGG_00168 Uniprot:G4NE44
Length = 646
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 201/570 (35%), Positives = 277/570 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A +A+ G A I+K P S+T AQGG++A L D
Sbjct: 60 YDAIVVGAGGAGLRAAFGLAEAGFNTACISKLFPTRSHTVAAQGGINAALGNMHEDDWRW 119
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
HM DT+ +L D + + + E P I EL G F R EDG ++ GG S
Sbjct: 120 HMYDTVKGSDWLGDQDAIHYMTREAPASIIELENYGCPFSRTEDGKIYQRAFGGQSQKYG 179
Query: 197 -----HRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
+R AAD TG + L + N + F +FA+DL+ D C GV
Sbjct: 180 KGGQAYRCCAAADRTGHALLHTLYGQSLRH-NTNYFIEYFAMDLIMQ----DGECVGVVA 234
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
N E + RF +K T+LA+GG G Y S T+ TGDGMAM RA ++EFVQFH
Sbjct: 235 YNQEDGTLHRFFAKNTVLATGGYGRAYFSCTSAHTCTGDGMAMVARAGLPNQDLEFVQFH 294
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GG L N ERFM Y A +LA RDVV+
Sbjct: 295 PTGIYGAGC------------LITEGSRGEGGYLLNSEGERFMERYAPTAKDLASRDVVS 342
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK ++ L +SH P E + P I+ + G+D+T QPIPV+P
Sbjct: 343 RSMTMEIREGRGVGPEKDHIYLQLSHLPAEVLAERLPGISETAAIFSGVDVTKQPIPVLP 402
Query: 425 AAHYMCGGVRAGLQGETN----------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GG+ GE V GL+ GE AC +HGANRL +NSLL+ +VF
Sbjct: 403 TVHYNMGGIPTRYTGEVITVDESGKDKVVPGLFACGEAACVSVHGANRLGANSLLDLVVF 462
Query: 475 ARRAVQPSI-DH----KKST--SIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKEL 527
R AV +I D+ +K T + D A + V + G + T EVR +
Sbjct: 463 GR-AVSHTIRDNFSPGQKHTPAAADAGAESIEVLDQVRTADGP-------KSTAEVRLAM 514
Query: 528 QSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNLFC 584
Q M V + R+ SL +++E++ + + W V E E+RNL
Sbjct: 515 QKAMQTDVSVFRTQESLDEGVRKVNEVDQMFSQVGTKDRSMIWNSDLV--ETLELRNLLT 572
Query: 585 CAKLVVSSALARHESRGLHYMVDFPHVEEN 614
CA SA AR ESRG H D+P +++
Sbjct: 573 CATQTAVSAAARKESRGAHAREDYPDRDDD 602
>UNIPROTKB|Q28ED0 [details] [associations]
symbol:sdha "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0006105 "succinate metabolic process"
evidence=ISS] [GO:0022904 "respiratory electron transport chain"
evidence=ISS] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
UniPathway:UPA00223 InterPro:IPR003953 Pfam:PF00890 GO:GO:0005743
GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099 GO:GO:0022904 KO:K00234
GO:GO:0008177 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 HSSP:P0AC41
HOVERGEN:HBG001461 GO:GO:0006105 CTD:6389 EMBL:CR848322
EMBL:BC135730 RefSeq:NP_001015989.1 UniGene:Str.9006
ProteinModelPortal:Q28ED0 SMR:Q28ED0 STRING:Q28ED0 GeneID:548743
KEGG:xtr:548743 Xenbase:XB-GENE-956942 Uniprot:Q28ED0
Length = 665
Score = 632 (227.5 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 185/557 (33%), Positives = 271/557 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A ITK P S+T AQGG++A L D
Sbjct: 65 FDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEDDDWRW 124
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R E G ++ GG S
Sbjct: 125 HFYDTVKGSDWLGDQDAIHYMTEQAPASVIELENYGMPFSRTEQGKIYQRAFGGQSLKFG 184
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 185 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 239
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + RF +K T++A+GG G + S T+ TGDG AM RA ++EFVQFH
Sbjct: 240 LCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTCTGDGTAMVTRAGLPCQDLEFVQFH 299
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 300 PTGIYGAGC------------LITEGCRGEGGILINSEGERFMERYAPVAKDLASRDVVS 347
Query: 371 RSIDDQLKK-----RNEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ +++ +V L + H P ++ S P I+ + + G+D+T +PIPV+P
Sbjct: 348 RSMTIEIREGRGCGKDKDHVYLQLHHLPPSQLASRLPGISETAMIFAGVDVTKEPIPVLP 407
Query: 425 AAHYMCGGVRAGLQGE--TNVRG-------LYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ T+V G LY GE A +HGANRL +NSLL+ +VF
Sbjct: 408 TVHYNMGGIPTNYKGQVITHVNGEDRVVPGLYACGEAASASVHGANRLGANSLLDLVVFG 467
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + K + N +V +L N RT E+R +Q M +
Sbjct: 468 RACALSIAESCKPGEPVPSIKENAGEESVA--NLDKLRFTNGSTRTSELRINMQKTMQNH 525
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R+ + L+ ++ + + + F+ G W V E E++NL CA +
Sbjct: 526 AAVFRTGSVLKEGCEKLSAINSTMDDIKTFDRGIVWNTDLV--ETLELQNLMLCALQTIY 583
Query: 592 SALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 584 GAEARKESRGAHAREDY 600
Score = 39 (18.8 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 2 ATGVAARTSNFHFGGIRCKGQSCQQASLVSS 32
AT AA T NFHF K S + + +S+
Sbjct: 27 ATCTAA-TRNFHFSVYGRKDTSAKLSDSIST 56
>TIGR_CMR|CJE_0488 [details] [associations]
symbol:CJE_0488 "succinate dehydrogenase, flavoprotein
subunit" species:195099 "Campylobacter jejuni RM1221" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0045282 "plasma
membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053
GO:GO:0022900 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01812 KO:K00239 RefSeq:YP_178507.1
ProteinModelPortal:Q5HW28 STRING:Q5HW28 GeneID:3231249
KEGG:cjr:CJE0488 PATRIC:20042680 OMA:SQMELAP ProtClustDB:CLSK878789
BioCyc:CJEJ195099:GJC0-498-MONOMER Uniprot:Q5HW28
Length = 576
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 185/564 (32%), Positives = 271/564 (48%)
Query: 76 RDGSVKYFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESNTNYAQGGVSAV-- 130
+D ++ D VIGSG AGL A V K +V V TK P + T A+GG++ V
Sbjct: 3 KDINLPSCDVLVIGSGGAGLRAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTD 62
Query: 131 LCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAR 190
DS + H DTI GAYL D + C I + IG F R E G +
Sbjct: 63 FSNGDSYKLHAYDTIKGGAYLVDQDAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRL 122
Query: 191 EGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
GG S R ++AD TG + + L+ +S + H +D+ +DG C GV
Sbjct: 123 MGGASKKRCNYSADKTGHILMHSCLDDAISS-GVKFLMDHELLDI-GVVDGK---CEGVV 177
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHI-YPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 309
++++ + + K ++A+GG I Y T+ P +ATGDG+A A RA + E +Q
Sbjct: 178 LRDIQSGGIYPVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQ 237
Query: 310 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVV 369
FHPT +A+ G LITEA RG+GG L N ERFM Y E+ ELAPRDVV
Sbjct: 238 FHPTGVANGGT------------LITEAARGEGGYLLNNRGERFMKNYHEKMELAPRDVV 285
Query: 370 ARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPV 422
AR+I+ ++++ YVL D+ H EKIL P I + + +D+ P+P+
Sbjct: 286 ARAIETEIREGRGYGEGLGAYVLCDVRHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPI 345
Query: 423 VPAAHYMCGGVR-AGLQG-ETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQ 480
P AHY GG+ A + T + G+YV GE +C +HGANRL NSL +A+V A
Sbjct: 346 RPTAHYSMGGIEVAKFEDMSTKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGHLAGI 405
Query: 481 PSIDHKKSTSIDLSASN------WWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
+ ++ K S A W R + G N + E+R+EL S W
Sbjct: 406 GATNYAKDASFGKGAKTHELAQKWQVRFKEITNNGGNG-----QEMYELREELGSQNWDN 460
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGL-EACEMRNLFCCAKLVVSSA 593
+GI R+ L ++++++A +E + E + E+ NL ++ +A
Sbjct: 461 MGIFRTQEKLDLLAKKLEDIQARYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAA 520
Query: 594 LARHESRGLHYMVDFPHVEENKRL 617
R ESRG H D+P ++ L
Sbjct: 521 RNRLESRGAHTREDYPKRDDKNFL 544
>TIGR_CMR|CPS_2217 [details] [associations]
symbol:CPS_2217 "succinate dehydrogenase, flavoprotein
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099 GO:GO:0022900
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 KO:K00239
OMA:VGCTAID ProtClustDB:PRK08958 RefSeq:YP_268942.1
ProteinModelPortal:Q482S5 SMR:Q482S5 STRING:Q482S5 GeneID:3519885
KEGG:cps:CPS_2217 PATRIC:21467545
BioCyc:CPSY167879:GI48-2287-MONOMER Uniprot:Q482S5
Length = 588
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 191/593 (32%), Positives = 286/593 (48%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDS 136
++ FD VIG+G AG+ AL +++ G + A+I+K P S+T AQGG++ L D
Sbjct: 5 IREFDAIVIGAGGAGMRAALAISESGKSCALISKVFPTRSHTVSAQGGITVALGNAHEDH 64
Query: 137 VESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH 196
E HM DT+ Y+ D + + +C GP+ I EL +G F R E+G ++ GG S
Sbjct: 65 WEQHMYDTVKGSDYIGDQDAIEYMCKTGPESIIELEKMGLPFSRTEEGKIYQRPFGGQSK 124
Query: 197 H-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
+ R AAD TG + L + V + +V+ +A+DL+ DG AV G
Sbjct: 125 NFGGEQAARTAAAADRTGHALLHCLYQQNVKNKT-NVYSEWYALDLVKNSDG--AVV-GT 180
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 309
+ +ET E+V F ++ T+LA+GGAG I+ STTN + TGDG+ M+ RA + +ME Q
Sbjct: 181 TAICIETGEIVYFKARATVLATGGAGRIFASTTNAHINTGDGVGMSLRAGIQMQDMEMWQ 240
Query: 310 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDV 368
FHPT +A G+ L+TE RG+GG L N ERFM Y A +LA RDV
Sbjct: 241 FHPTGIAGAGV------------LVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDV 288
Query: 369 VARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKYG-LDITSQPIP 421
VARS+ ++++ ++ L + H E + P + + +D +PIP
Sbjct: 289 VARSMMTEIREGRGCDGPWGPHIKLKLDHLGRETLYKRLPGVCDLSKTFAHVDPAEEPIP 348
Query: 422 VVPAAHYMCGGVRAGLQG----------ETNVRGLYVAGEVACTGLHGANRLASNSLLEA 471
V+P HY GGV + G ET V GL+ GE+AC +HGANRL NSLL+
Sbjct: 349 VIPTCHYQMGGVPCNVNGQALNIGSDGKETIVEGLFAVGEIACVSVHGANRLGGNSLLDL 408
Query: 472 LVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTK--EVRKELQS 529
+VF R A + T AS + ++ N + + ++RK+LQ
Sbjct: 409 VVFGRAAGNFLGTYLNETQTATEASESDLEAALART---NRWESSTKGEDPVQIRKDLQM 465
Query: 530 IMWRYVGIVRSTTSLQTAEWRIDEL-EAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKL 588
M + R ++ + E+ E + L + E +E E+ NL A
Sbjct: 466 CMQMNFSVFREGEAMAQGMKELTEIRERLSDARLDDKSSEFNTQRIECLELDNLMETAFC 525
Query: 589 VVSSALARHESRGLHYMVDFPHVEE-NKRLPTIILPSLVNCTWSSRQLHKLPV 640
+A R ESRG H DF ++ N ++ P T R ++ PV
Sbjct: 526 SAKAANFRTESRGAHARQDFTERDDVNWLCHSVYTPETEEMT--KRDVNMKPV 576
>MGI|MGI:1914195 [details] [associations]
symbol:Sdha "succinate dehydrogenase complex, subunit A,
flavoprotein (Fp)" species:10090 "Mus musculus" [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0006105 "succinate metabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISO] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016627 "oxidoreductase activity, acting on the
CH-CH group of donors" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0022904 "respiratory electron
transport chain" evidence=ISO] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
EMBL:AF095938 Pfam:PF00890 MGI:MGI:1914195 GO:GO:0007399
GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099 GO:GO:0022904
GO:GO:0005749 KO:K00234 OMA:CFTADAT GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 HOVERGEN:HBG001461
GO:GO:0006105 CTD:6389 GeneTree:ENSGT00390000010046
OrthoDB:EOG47H5PJ ChiTaRS:SdhA EMBL:AK029520 EMBL:AK034928
EMBL:AK049590 EMBL:AK050475 EMBL:AK075990 EMBL:AK145923
EMBL:AK147286 EMBL:AK147624 EMBL:AK153085 EMBL:AK162148
EMBL:AK169254 EMBL:AK004362 EMBL:BC011301 EMBL:BC031849
EMBL:DQ402975 IPI:IPI00230351 RefSeq:NP_075770.1 UniGene:Mm.158231
ProteinModelPortal:Q8K2B3 SMR:Q8K2B3 IntAct:Q8K2B3 STRING:Q8K2B3
PhosphoSite:Q8K2B3 REPRODUCTION-2DPAGE:Q8K2B3 PaxDb:Q8K2B3
PRIDE:Q8K2B3 Ensembl:ENSMUST00000022062 GeneID:66945 KEGG:mmu:66945
UCSC:uc007rfa.1 InParanoid:Q8K2B3 NextBio:323092 Bgee:Q8K2B3
Genevestigator:Q8K2B3 GermOnline:ENSMUSG00000021577 Uniprot:Q8K2B3
Length = 664
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 201/600 (33%), Positives = 292/600 (48%)
Query: 47 LRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKY-FDFSVIGSGVAGLCYALEVAKHG 105
L+ Q F H V EN K+ V + V + FD V+G+G AGL A +++ G
Sbjct: 26 LQKQTCGF-HFSVGENKKASAKVSDAISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAG 84
Query: 106 -TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVESHMQDTIVAGAYLCDDETVRVVCT 162
A +TK P S+T AQGG++A L D+ H DT+ +L D + + +
Sbjct: 85 FNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTE 144
Query: 163 EGPDRIRELIAIGASFDRGEDGNLHLAREGGHS--------HHRIVHAADMTGREIERAL 214
+ P + EL G F R EDG ++ GG S HR AD TG + L
Sbjct: 145 QAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTL 204
Query: 215 LEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGA 274
+ + S F +FA+DLL + C GV L +E + R +K T++A+GG
Sbjct: 205 YGRSLRY-DTSYFVEYFALDLLME----NGECRGVIALCIEDGSIHRIRAKNTVIATGGY 259
Query: 275 GHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLI 334
G Y S T+ +TGDG AM RA ++EFVQFHPT + G LI
Sbjct: 260 GRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC------------LI 307
Query: 335 TEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVARSIDDQLKKRN----EK-YVLLD 388
TE RG+GGIL N ERFM Y A +LA RDVV+RS+ ++++ EK +V L
Sbjct: 308 TEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQ 367
Query: 389 ISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGET----N- 442
+ H P E++ + P I+ + + G+D+T +PIPV+P HY GG+ +G+ N
Sbjct: 368 LHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLKHVNG 427
Query: 443 ----VRGLYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSIDHKKSTSIDLSASN 497
V GLY GE AC +HGANRL +NSLL+ +VF R A+ + + + +N
Sbjct: 428 QDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDKVPSIKAN 487
Query: 498 WWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAE 557
+V+ +L + RT E+R +Q M + + R + LQ +I +L +
Sbjct: 488 AGEESVM--NLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGD 545
Query: 558 WETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP-HVEE 613
+ F+ G W V E E++NL CA + A AR ESRG H D+ V+E
Sbjct: 546 LKHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDE 603
>CGD|CAL0005687 [details] [associations]
symbol:SDH1 species:5476 "Candida albicans" [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=IEA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 CGD:CAL0005687
Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099
GO:GO:0022900 GO:GO:0016627 KO:K00234 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715875.1 RefSeq:XP_715925.1 ProteinModelPortal:Q5A2A1
SMR:Q5A2A1 STRING:Q5A2A1 GeneID:3642437 GeneID:3642477
KEGG:cal:CaO19.440 KEGG:cal:CaO19.8070 Uniprot:Q5A2A1
Length = 638
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 197/567 (34%), Positives = 279/567 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A +A+ G A I+K P S+T AQGG++A L D
Sbjct: 52 YDCVVVGAGGAGLRAAFGLAESGFKTACISKLFPTRSHTVAAQGGINAALGNMHKDDWHW 111
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
H DT+ +L D + + + E PD I EL G F R ++G ++ GG +
Sbjct: 112 HFYDTVKGSDWLGDQDAIHYMTKEAPDSIYELEHFGVPFSRNDEGRIYQRAFGGQTKEFG 171
Query: 197 -----HRIVHAADMTGREIERALL-EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
+R AD TG + +L +A+ D + F FA+DLL D C GV
Sbjct: 172 KGGQAYRTCAVADRTGHALLHSLYGQALRHDCHF--FIEFFAMDLLMQ----DGECVGVI 225
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
N E + RF S T++A+GG G Y S T+ TGDG AMA RA + ++EF+QF
Sbjct: 226 AYNQEDGTIHRFRSHKTVIATGGYGRAYFSCTSAHTCTGDGYAMASRAGLPLQDLEFIQF 285
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVV 369
HP+ + G LITE RG+GG L N ERFM Y A +LA RDVV
Sbjct: 286 HPSGIYGSGC------------LITEGARGEGGFLVNSEGERFMERYAPTAKDLACRDVV 333
Query: 370 ARSIDDQLKKR----NEK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVV 423
+R+I ++ + +EK ++ L +SH P + P I+ + G+D+T +PIP++
Sbjct: 334 SRAITMEINEGRGVGSEKDHMYLQLSHLPAAVLKQRLPGISETAHIFAGVDVTKEPIPIL 393
Query: 424 PAAHYMCGGVRAGLQGE-----TN-----VRGLYVAGEVACTGLHGANRLASNSLLEALV 473
P HY GG+ QGE T+ V GL GE AC +HGANRL +NSLL+ +V
Sbjct: 394 PTVHYNMGGIPTNWQGEVLKKGTDGKDEVVPGLLACGEAACASVHGANRLGANSLLDLVV 453
Query: 474 FARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNI--LRR------TKEVRK 525
F R AV +I + L AS P LG + N+ LR T E+R
Sbjct: 454 FGR-AVSHTIRDNLTPGAPLHAS--------PADLGKASIENLHRLRNAEGTKSTAEIRL 504
Query: 526 ELQSIMWRYVGIVRSTTSLQTAEWRIDELE---AEWETYLFEHGWEQTFVGLEACEMRNL 582
++Q M + + R+ +L+ I+E++ A +T W V E E++NL
Sbjct: 505 DMQKTMQKGCAVFRTEETLEECVDNINEVDKSFANVKTTDRSMIWNSDLV--ETMELQNL 562
Query: 583 FCCAKLVVSSALARHESRGLHYMVDFP 609
CA +SALAR ESRG H D+P
Sbjct: 563 LTCATQTAASALARKESRGSHSREDYP 589
>UNIPROTKB|Q801S2 [details] [associations]
symbol:sdha-b "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit B, mitochondrial" species:8355 "Xenopus
laevis" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0022904
"respiratory electron transport chain" evidence=ISS] [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005743 GO:GO:0050660 GO:GO:0006099
GO:GO:0022904 KO:K00234 GO:GO:0008177 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 HSSP:P0AC41 HOVERGEN:HBG001461 GO:GO:0006105
EMBL:BC047261 RefSeq:NP_001080770.1 UniGene:Xl.1718
ProteinModelPortal:Q801S2 SMR:Q801S2 GeneID:380463 KEGG:xla:380463
CTD:6389 Xenbase:XB-GENE-956949 Uniprot:Q801S2
Length = 665
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 187/557 (33%), Positives = 275/557 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A ITK P S+T AQGG++A L D
Sbjct: 65 FDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEDDDWRW 124
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R E G ++ GG S
Sbjct: 125 HFYDTVKGSDWLGDQDAIHYMTEQAPASVIELENYGMPFSRTEQGKIYQRAFGGQSLKYG 184
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 185 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 239
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + RF +K T++A+GG G Y S T+ TGDG AM RA ++EFVQFH
Sbjct: 240 LCMEDGSIHRFRAKNTVIATGGYGRTYFSCTSAHTCTGDGTAMVTRAGLPCQDLEFVQFH 299
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 300 PTGIYGAGC------------LITEGCRGEGGILINSEGERFMERYAPVAKDLASRDVVS 347
Query: 371 RSIDDQLKK-----RNEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ +++ +V L + H P ++ S P I+ + + G+D+T +PIPV+P
Sbjct: 348 RSMTIEMREGRGCGKDKDHVYLQLHHLPPSQLASRLPGISETAMIFAGVDVTKEPIPVLP 407
Query: 425 AAHYMCGGVRAGLQGE--TNVRG-------LYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ T+V G LY GE A +HGANRL +NSLL+ +VF
Sbjct: 408 TVHYNMGGIPTNYKGQVITHVNGEDRVVPGLYACGEAASASVHGANRLGANSLLDLVVFG 467
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + + K ++ N +V +L N RT E+R +Q M +
Sbjct: 468 RACALSIAEECKPGEALPSIKENAGEESVA--NLDKLRFANGSTRTSELRLNMQKTMQTH 525
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R+ + L+ ++ + + + F+ G W V E E++NL CA ++
Sbjct: 526 AAVFRTGSVLKEGCEKLSVINSAMDDLKTFDRGIVWNTDVV--ETLELQNLMLCALQTIN 583
Query: 592 SALARHESRGLHYMVDF 608
SA AR ESRG H D+
Sbjct: 584 SAEARKESRGAHAREDY 600
>UNIPROTKB|F1Q1X9 [details] [associations]
symbol:SDHA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0016627 "oxidoreductase activity, acting on the CH-CH group of
donors" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 GO:GO:0006099
GO:GO:0022900 GO:GO:0016627 OMA:CFTADAT Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 GeneTree:ENSGT00390000010046 EMBL:AAEX03017236
Ensembl:ENSCAFT00000017502 Uniprot:F1Q1X9
Length = 722
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 191/557 (34%), Positives = 273/557 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 120 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 179
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 180 HFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGRIYQRAFGGQSLKFG 239
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 240 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 294
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 295 LCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFH 354
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 355 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 402
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ P I+ + + G+D+T +PIPV+P
Sbjct: 403 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLAIRLPGISETAMIFAGVDVTKEPIPVLP 462
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSLL+ +VF
Sbjct: 463 TVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFG 522
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + + I N +V+ +L N RT E+R +Q M +
Sbjct: 523 RACALSIAESCRPGDKIPPIKPNAGEESVM--NLDKLRFANGSVRTSELRLNMQKSMQSH 580
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R + LQ +I +L + + F+ G W V E E++NL CA +
Sbjct: 581 AAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIY 638
Query: 592 SALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 639 GAEARKESRGAHAREDY 655
>UNIPROTKB|Q9KQB1 [details] [associations]
symbol:VC_2089 "Succinate dehydrogenase, flavoprotein
subunit" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0009055 "electron carrier activity" evidence=ISS] [GO:0045282
"plasma membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0009055 GO:GO:0050660 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0022900 GO:GO:0000104
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 KO:K00239 OMA:VGCTAID
ProtClustDB:PRK08958 GO:GO:0045282 HSSP:P10444 PIR:G82118
RefSeq:NP_231721.1 ProteinModelPortal:Q9KQB1 SMR:Q9KQB1
DNASU:2613345 GeneID:2613345 KEGG:vch:VC2089 PATRIC:20083209
Uniprot:Q9KQB1
Length = 588
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 200/602 (33%), Positives = 297/602 (49%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPS--DS 136
V+ FD VIG+G AG+ AL++++ G T A+++K P S+T AQGG++ L S D
Sbjct: 5 VRSFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDD 64
Query: 137 VESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH 196
+ HM DT+ Y+ D + +C GP+ + EL +G F R E+G ++ GG S
Sbjct: 65 WQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSK 124
Query: 197 H-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
R AAD TG + L + V ++F +A+DL+ DG AV G
Sbjct: 125 EFGGEQAARTAAAADRTGHALLHTLYQQNVKHKT-TIFSEWYALDLVKNQDG--AVL-GC 180
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 309
+ +ET E+ F +K T+LA+GGAG IY STTN + TGDG+ MA RA + +ME Q
Sbjct: 181 TAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ 240
Query: 310 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDV 368
FHPT +A G+ L+TE RG+GG L N ERFM Y A +LA RDV
Sbjct: 241 FHPTGIAGAGV------------LVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDV 288
Query: 369 VARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKYG-LDITSQPIP 421
VARS+ ++++ ++ L + H + + S P I + +D +PIP
Sbjct: 289 VARSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIP 348
Query: 422 VVPAAHYMCGGVRAGLQGET----------NVRGLYVAGEVACTGLHGANRLASNSLLEA 471
V+P HYM GGV + G+ V+GL+ GE+A +HGANRL NSLL+
Sbjct: 349 VIPTCHYMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDL 408
Query: 472 LVFAR-------RAVQPSIDHKKSTSIDLSASNWWTRTVV-PKSLGCNVMHNILRRTKEV 523
+VF R ++ + + +T+ D+ AS RT+ S G ++ +
Sbjct: 409 VVFGRATGLHLGETLRAQAEARPATASDIEAS--LARTMRWENSKGGE--DPVV-----I 459
Query: 524 RKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWE----TYLFEHGWEQTFVGLEACEM 579
RK+LQ M + R ++ AE ++EL+ E +L + E +E E+
Sbjct: 460 RKDLQRCMQNNFSVFREGKAM--AEG-LEELKVIRERLKNAHLADKSTEFNTQRIECLEL 516
Query: 580 RNLFCCAKLVVSSALARHESRGLHYMVDFPHVE-ENKRLPTIILPSLVNCTWSSRQLHKL 638
NL A +A R ESRG H D+P + EN +I P S R+++
Sbjct: 517 DNLMETAFSTAVAANYRTESRGAHARFDYPERDDENWLCHSIYNPETEQM--SKREVNMT 574
Query: 639 PV 640
PV
Sbjct: 575 PV 576
>TIGR_CMR|VC_2089 [details] [associations]
symbol:VC_2089 "succinate dehydrogenase, flavoprotein
subunit" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
GO:GO:0009055 GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006099 GO:GO:0022900 GO:GO:0000104 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 KO:K00239 OMA:VGCTAID ProtClustDB:PRK08958
GO:GO:0045282 HSSP:P10444 PIR:G82118 RefSeq:NP_231721.1
ProteinModelPortal:Q9KQB1 SMR:Q9KQB1 DNASU:2613345 GeneID:2613345
KEGG:vch:VC2089 PATRIC:20083209 Uniprot:Q9KQB1
Length = 588
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 200/602 (33%), Positives = 297/602 (49%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPS--DS 136
V+ FD VIG+G AG+ AL++++ G T A+++K P S+T AQGG++ L S D
Sbjct: 5 VRSFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDD 64
Query: 137 VESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH 196
+ HM DT+ Y+ D + +C GP+ + EL +G F R E+G ++ GG S
Sbjct: 65 WQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSK 124
Query: 197 H-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
R AAD TG + L + V ++F +A+DL+ DG AV G
Sbjct: 125 EFGGEQAARTAAAADRTGHALLHTLYQQNVKHKT-TIFSEWYALDLVKNQDG--AVL-GC 180
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 309
+ +ET E+ F +K T+LA+GGAG IY STTN + TGDG+ MA RA + +ME Q
Sbjct: 181 TAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ 240
Query: 310 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDV 368
FHPT +A G+ L+TE RG+GG L N ERFM Y A +LA RDV
Sbjct: 241 FHPTGIAGAGV------------LVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDV 288
Query: 369 VARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKYG-LDITSQPIP 421
VARS+ ++++ ++ L + H + + S P I + +D +PIP
Sbjct: 289 VARSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIP 348
Query: 422 VVPAAHYMCGGVRAGLQGET----------NVRGLYVAGEVACTGLHGANRLASNSLLEA 471
V+P HYM GGV + G+ V+GL+ GE+A +HGANRL NSLL+
Sbjct: 349 VIPTCHYMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDL 408
Query: 472 LVFAR-------RAVQPSIDHKKSTSIDLSASNWWTRTVV-PKSLGCNVMHNILRRTKEV 523
+VF R ++ + + +T+ D+ AS RT+ S G ++ +
Sbjct: 409 VVFGRATGLHLGETLRAQAEARPATASDIEAS--LARTMRWENSKGGE--DPVV-----I 459
Query: 524 RKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWE----TYLFEHGWEQTFVGLEACEM 579
RK+LQ M + R ++ AE ++EL+ E +L + E +E E+
Sbjct: 460 RKDLQRCMQNNFSVFREGKAM--AEG-LEELKVIRERLKNAHLADKSTEFNTQRIECLEL 516
Query: 580 RNLFCCAKLVVSSALARHESRGLHYMVDFPHVE-ENKRLPTIILPSLVNCTWSSRQLHKL 638
NL A +A R ESRG H D+P + EN +I P S R+++
Sbjct: 517 DNLMETAFSTAVAANYRTESRGAHARFDYPERDDENWLCHSIYNPETEQM--SKREVNMT 574
Query: 639 PV 640
PV
Sbjct: 575 PV 576
>RGD|621557 [details] [associations]
symbol:Sdha "succinate dehydrogenase complex, subunit A,
flavoprotein (Fp)" species:10116 "Rattus norvegicus" [GO:0000104
"succinate dehydrogenase activity" evidence=ISO;ISS] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS;IDA] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0006105 "succinate
metabolic process" evidence=ISO;ISS;IMP] [GO:0007399 "nervous
system development" evidence=IEA;ISO] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IMP] [GO:0022904
"respiratory electron transport chain" evidence=ISO;ISS;IMP]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 Pfam:PF00890 RGD:621557 GO:GO:0050660
eggNOG:COG1053 GO:GO:0006099 GO:GO:0022904 GO:GO:0005749
HOGENOM:HOG000160475 KO:K00234 GO:GO:0008177 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 HOVERGEN:HBG001461 GO:GO:0006105 CTD:6389
GeneTree:ENSGT00390000010046 EMBL:AB072907 IPI:IPI00200659
RefSeq:NP_569112.1 UniGene:Rn.228607 ProteinModelPortal:Q920L2
SMR:Q920L2 IntAct:Q920L2 STRING:Q920L2 PhosphoSite:Q920L2
World-2DPAGE:0004:Q920L2 PRIDE:Q920L2 Ensembl:ENSRNOT00000018336
GeneID:157074 KEGG:rno:157074 UCSC:RGD:621557 SABIO-RK:Q920L2
NextBio:620967 ArrayExpress:Q920L2 Genevestigator:Q920L2
GermOnline:ENSRNOG00000013331 Uniprot:Q920L2
Length = 656
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 188/557 (33%), Positives = 275/557 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 54 FDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 113
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 114 HFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGRIYQRAFGGQSLKFG 173
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 174 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 228
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 229 LCIEDGSIHRIRAKNTIIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFH 288
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 289 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 336
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ + P I+ + + G+D+T +PIPV+P
Sbjct: 337 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLP 396
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSLL+ +VF
Sbjct: 397 TVHYNMGGIPTNYKGQVLKHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFG 456
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + + + +N +V+ +L + RT E+R +Q M +
Sbjct: 457 RACALSIAESCRPGDKVPPIKANAGEESVM--NLDKLRFADGSVRTSELRLSMQKSMQSH 514
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R + LQ ++ +L + + F+ G W V E E++NL CA +
Sbjct: 515 AAVFRVGSVLQEGCEKVSQLYGDLQHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIY 572
Query: 592 SALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 573 GAEARKESRGAHAREDY 589
>UNIPROTKB|F8WG21 [details] [associations]
symbol:Sdha "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:10116 "Rattus
norvegicus" [GO:0000104 "succinate dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0006105 "succinate
metabolic process" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0022904 "respiratory electron
transport chain" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
RGD:621557 GO:GO:0050660 GO:GO:0006099 GO:GO:0022900 GO:GO:0016627
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 IPI:IPI00952280
Ensembl:ENSRNOT00000042855 Uniprot:F8WG21
Length = 664
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 188/557 (33%), Positives = 275/557 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 62 FDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 121
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 122 HFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGRIYQRAFGGQSLKFG 181
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 182 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 236
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 237 LCIEDGSIHRIRAKNTIIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFH 296
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 297 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 344
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ + P I+ + + G+D+T +PIPV+P
Sbjct: 345 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLP 404
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSLL+ +VF
Sbjct: 405 TVHYNMGGIPTNYKGQVLKHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFG 464
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + + + +N +V+ +L + RT E+R +Q M +
Sbjct: 465 RACALSIAESCRPGDKVPPIKANAGEESVM--NLDKLRFADGSVRTSELRLSMQKSMQSH 522
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R + LQ ++ +L + + F+ G W V E E++NL CA +
Sbjct: 523 AAVFRVGSVLQEGCEKVSQLYGDLQHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIY 580
Query: 592 SALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 581 GAEARKESRGAHAREDY 597
>SGD|S000003581 [details] [associations]
symbol:YJL045W "Minor succinate dehydrogenase isozyme"
species:4932 "Saccharomyces cerevisiae" [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0045333 "cellular respiration"
evidence=IGI;IMP] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA;IGI;ISS;IMP] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016627 "oxidoreductase activity, acting on the
CH-CH group of donors" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
SGD:S000003581 Pfam:PF00890 GO:GO:0005739 EMBL:BK006943
GO:GO:0005743 GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099
GO:GO:0022900 GO:GO:0045333 HOGENOM:HOG000160475 KO:K00234
GO:GO:0008177 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812
GeneTree:ENSGT00390000010046 OrthoDB:EOG41G6C9 EMBL:Z49320
PIR:S56817 RefSeq:NP_012490.1 ProteinModelPortal:P47052 SMR:P47052
DIP:DIP-4262N IntAct:P47052 MINT:MINT-501076 STRING:P47052
PeptideAtlas:P47052 EnsemblFungi:YJL045W GeneID:853405
KEGG:sce:YJL045W CYGD:YJL045w OMA:HAMRSHS NextBio:973903
Genevestigator:P47052 GermOnline:YJL045W Uniprot:P47052
Length = 634
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 193/578 (33%), Positives = 282/578 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A +A+ G A ++K P S+T AQGG++A L D +S
Sbjct: 47 YDCVVVGAGGAGLRAAFGLAEAGYKTACLSKLFPTRSHTVAAQGGINAALGNMHPDDWKS 106
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
HM DT+ +L D + + + E P + EL G F R EDG ++ GG S
Sbjct: 107 HMYDTVKGSDWLGDQDAIHYMTREAPKSVIELEHYGMPFSRTEDGRIYQRAFGGQSKDFG 166
Query: 197 -----HRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
+R AD TG + L + + N F +FA+DLLT +G + V GV
Sbjct: 167 KGGQAYRTCAVADRTGHAMLHTLYGQALKN-NTHFFIEYFAMDLLTH-NG-EVV--GVIA 221
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
N E + RF + T++A+GG G Y S T+ TGDG AM RA + ++EFVQFH
Sbjct: 222 YNQEDGTIHRFRAHKTVIATGGYGRAYFSCTSAHTCTGDGNAMVSRAGFPLEDLEFVQFH 281
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
P+ + G LITE RG+GG L N ERFM Y A +LA RDVV+
Sbjct: 282 PSGIYGSGC------------LITEGARGEGGFLLNSEGERFMERYAPTAKDLASRDVVS 329
Query: 371 RSIDDQLKK-----RNEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
R+I +++ +N+ ++LL +SH P E + P I+ + G+D+T +PIPV+P
Sbjct: 330 RAITMEIRAGRGVGKNKDHILLQLSHLPPEVLKERLPGISETAAVFAGVDVTQEPIPVLP 389
Query: 425 AAHYMCGGVRAGLQGE-------TN----VRGLYVAGEVACTGLHGANRLASNSLLEALV 473
HY GG+ GE T + GL GE AC +HGANRL +NSLL+ +V
Sbjct: 390 TVHYNMGGIPTKWTGEALTIDEETGEDKVIPGLMACGEAACVSVHGANRLGANSLLDLVV 449
Query: 474 FARRA-------VQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKE 526
F R +QP + HK ASN ++ N ++ +T ++R
Sbjct: 450 FGRAVANTIADTLQPGLPHKPL------ASNIGHESIANLDKVRNARGSL--KTSQIRLN 501
Query: 527 LQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWE-TYLFEHG--WEQTFVGLEACEMRNLF 583
+Q M + V + R+ +L I E++ +E ++ + W V E E++NL
Sbjct: 502 MQRTMQKDVSVFRTQDTLDEGVRNITEVDKTFEDVHVSDKSMIWNSDLV--ETLELQNLL 559
Query: 584 CCAKLVVSSALARHESRGLHYMVDFPHVEE-NKRLPTI 620
CA SA R ESRG H D+ ++ N R T+
Sbjct: 560 TCATQTAVSASKRKESRGAHAREDYAKRDDVNWRKHTL 597
>UNIPROTKB|P31040 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;TAS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000104 "succinate
dehydrogenase activity" evidence=IMP] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS;TAS] [GO:0055114
"oxidation-reduction process" evidence=IDA] [GO:0006105 "succinate
metabolic process" evidence=IDA] [GO:0022904 "respiratory electron
transport chain" evidence=IDA;TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS;TAS] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0007399 GO:GO:0050660 eggNOG:COG1053
GO:GO:0006099 Orphanet:154 EMBL:CH471235 DrugBank:DB00139
GO:GO:0022904 MIM:256000 GO:GO:0005749 Orphanet:29072
Orphanet:255241 KO:K00234 OMA:CFTADAT GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 HOVERGEN:HBG001461
GO:GO:0006105 CTD:6389 OrthoDB:EOG47H5PJ EMBL:D30648 EMBL:L21936
EMBL:AF171030 EMBL:AF171017 EMBL:AF171018 EMBL:AF171019
EMBL:AF171020 EMBL:AF171021 EMBL:AF171022 EMBL:AF171023
EMBL:AF171024 EMBL:AF171025 EMBL:AF171026 EMBL:AF171027
EMBL:AF171028 EMBL:AF171029 EMBL:AK291311 EMBL:BC001380 EMBL:X53943
EMBL:S79641 IPI:IPI00305166 PIR:JX0336 PIR:S21302
RefSeq:NP_004159.2 UniGene:Hs.440475 ProteinModelPortal:P31040
SMR:P31040 IntAct:P31040 STRING:P31040 PhosphoSite:P31040
DMDM:1169337 REPRODUCTION-2DPAGE:IPI00305166 PaxDb:P31040
PeptideAtlas:P31040 PRIDE:P31040 DNASU:6389 Ensembl:ENST00000264932
GeneID:6389 KEGG:hsa:6389 UCSC:uc003jao.4 GeneCards:GC05P000208
H-InvDB:HIX0120996 HGNC:HGNC:10680 HPA:CAB034929 MIM:252011
MIM:600857 MIM:613642 MIM:614165 neXtProt:NX_P31040 Orphanet:3208
PharmGKB:PA35605 InParanoid:P31040 PhylomeDB:P31040
BioCyc:MetaCyc:ENSG00000073578-MONOMER ChEMBL:CHEMBL5758
GenomeRNAi:6389 NextBio:24820 ArrayExpress:P31040 Bgee:P31040
CleanEx:HS_SDHA Genevestigator:P31040 GermOnline:ENSG00000073578
Uniprot:P31040
Length = 664
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 191/558 (34%), Positives = 275/558 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 62 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 121
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 122 HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFG 181
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 182 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 236
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 237 LCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFH 296
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 297 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 344
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ + P I+ + + G+D+T +PIPV+P
Sbjct: 345 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLP 404
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSLL+ +VF
Sbjct: 405 TVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFG 464
Query: 476 RRAVQPSIDH--KKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWR 533
R A SI+ + + N +V+ +L + RT E+R +Q M
Sbjct: 465 R-ACALSIEESCRPGDKVPPIKPNAGEESVM--NLDKLRFADGSIRTSELRLSMQKSMQN 521
Query: 534 YVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVV 590
+ + R + LQ +I +L + + F+ G W V E E++NL CA +
Sbjct: 522 HAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTI 579
Query: 591 SSALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 580 YGAEARKESRGAHAREDY 597
>UNIPROTKB|Q5R616 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9601 "Pongo abelii"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0022904
"respiratory electron transport chain" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 GO:GO:0006099 GO:GO:0022904
GO:GO:0005749 KO:K00234 GO:GO:0008177 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 HSSP:P0AC41 HOVERGEN:HBG001461 GO:GO:0006105
CTD:6389 EMBL:CR860684 RefSeq:NP_001126633.1 UniGene:Pab.18686
ProteinModelPortal:Q5R616 SMR:Q5R616 PRIDE:Q5R616 GeneID:100173631
KEGG:pon:100173631 Uniprot:Q5R616
Length = 664
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 191/558 (34%), Positives = 275/558 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 62 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 121
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 122 HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFG 181
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 182 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 236
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 237 LCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFH 296
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 297 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 344
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ + P I+ + + G+D+T +PIPV+P
Sbjct: 345 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLP 404
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSLL+ +VF
Sbjct: 405 TVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFG 464
Query: 476 RRAVQPSIDH--KKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWR 533
R A SI+ + + N +V+ +L + RT E+R +Q M
Sbjct: 465 R-ACALSIEESCRPGDKVPPIKPNAGEESVM--NLDKLRFADGSIRTSELRLSMQKSMQN 521
Query: 534 YVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVV 590
+ + R + LQ +I +L + + F+ G W V E E++NL CA +
Sbjct: 522 HAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTI 579
Query: 591 SSALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 580 YGAEARKESRGAHAREDY 597
>UNIPROTKB|Q0QF01 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 GO:GO:0006099
GO:GO:0022900 GO:GO:0005749 PDB:1ZOY PDB:1ZP0 PDB:3ABV PDB:3AE1
PDB:3AE2 PDB:3AE3 PDB:3AE4 PDB:3AE5 PDB:3AE6 PDB:3AE7 PDB:3AE8
PDB:3AE9 PDB:3AEA PDB:3AEB PDB:3AEC PDB:3AED PDB:3AEE PDB:3AEF
PDB:3AEG PDB:3SFD PDB:3SFE PDBsum:1ZOY PDBsum:1ZP0 PDBsum:3ABV
PDBsum:3AE1 PDBsum:3AE2 PDBsum:3AE3 PDBsum:3AE4 PDBsum:3AE5
PDBsum:3AE6 PDBsum:3AE7 PDBsum:3AE8 PDBsum:3AE9 PDBsum:3AEA
PDBsum:3AEB PDBsum:3AEC PDBsum:3AED PDBsum:3AEE PDBsum:3AEF
PDBsum:3AEG PDBsum:3SFD PDBsum:3SFE GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 HOVERGEN:HBG001461
EMBL:DQ402993 EMBL:DQ845177 UniGene:Ssc.24988
ProteinModelPortal:Q0QF01 PRIDE:Q0QF01 EvolutionaryTrace:Q0QF01
Uniprot:Q0QF01
Length = 664
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 192/563 (34%), Positives = 275/563 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 62 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 121
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 122 HFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFG 181
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 182 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 236
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R ++ T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 237 LCIEDGSIHRIRARNTVVATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFH 296
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 297 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 344
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ P I+ + + G+D+T +PIPV+P
Sbjct: 345 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLAVRLPGISETAMIFAGVDVTKEPIPVLP 404
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSLL+ +VF
Sbjct: 405 TVHYNMGGIPTNYKGQVLRHVNGQDQVVPGLYACGEAACASVHGANRLGANSLLDLVVFG 464
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + + + N +V+ +L N RT E+R +Q M +
Sbjct: 465 RACALSIAESCRPGDKVPSIKPNAGEESVM--NLDKLRFANGTIRTSELRLSMQKSMQSH 522
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R + LQ +I L + + F+ G W V E E++NL CA +
Sbjct: 523 AAVFRVGSVLQEGCEKILRLYGDLQHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIY 580
Query: 592 SALARHESRGLHYMVDFPH-VEE 613
A AR ESRG H DF V+E
Sbjct: 581 GAEARKESRGAHAREDFKERVDE 603
>ASPGD|ASPL0000038035 [details] [associations]
symbol:AN2916 species:162425 "Emericella nidulans"
[GO:0006099 "tricarboxylic acid cycle" evidence=RCA] [GO:0000104
"succinate dehydrogenase activity" evidence=RCA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005739 GO:GO:0050660
EMBL:BN001306 GO:GO:0006099 GO:GO:0022900 GO:GO:0016627
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 OMA:HAMRSHS
ProteinModelPortal:C8VJ65 EnsemblFungi:CADANIAT00010171
Uniprot:C8VJ65
Length = 647
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 211/616 (34%), Positives = 293/616 (47%)
Query: 42 ELSWFLRFQRFNFSHS-PVSENWKS--LRTVPVLSCLRDGSVKY------FDFSVIGSGV 92
++S LR QR FS S P + + + LR P + S KY +D V+G+G
Sbjct: 14 KISRALRDQRRLFSSSRPAARIFGTNPLRAKPAEGYI---SEKYPVIDHEYDAVVVGAGG 70
Query: 93 AGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVESHMQDTIVAGA 149
AGL A +A+ G A ++K P S+T AQGG++A L D HM DT+
Sbjct: 71 AGLRAAFGLAEAGFNTACVSKLFPTRSHTVAAQGGINAALGNMHPDDWRWHMYDTVKGSD 130
Query: 150 YLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--------HRIVH 201
+L D + + + E P +REL G F R E+G ++ GG S +R
Sbjct: 131 WLGDQDAIHYMTREAPASVRELEGYGCPFSRTEEGLIYQRAFGGQSKEFGKGGQAYRCCA 190
Query: 202 AADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVR 261
AD TG + L + N + F +FA+DLL + C G+ N E + R
Sbjct: 191 VADRTGHALLHTLYGQSLRH-NTNYFIEYFAMDLLME----NGECRGIIAYNQEDGTLHR 245
Query: 262 FISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLP 321
F + T+LA+GG G Y S T+ TGDGMAM RA ++EFVQFHPT + G
Sbjct: 246 FKAHHTVLATGGYGRAYFSCTSAHTCTGDGMAMVARAGLPNQDLEFVQFHPTGIYGAGC- 304
Query: 322 IKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVARSIDDQLKKR 380
LITE RG+GG L N ERFM Y A +LA RDVV+RS+ ++++
Sbjct: 305 -----------LITEGARGEGGYLLNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREG 353
Query: 381 N----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVR 434
EK ++ L +SH P + P I+ + G+D+T QPIPV+P HY GG+
Sbjct: 354 RGVGPEKDHIYLQLSHLPASLLHERLPGISETASIFAGVDVTKQPIPVLPTVHYNMGGIP 413
Query: 435 AGLQGET-------N---VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSID 484
GE N V GLY GE AC +HGANRL +NSLL+ +VF R AV +
Sbjct: 414 TKFTGEVLTQDENGNDKVVPGLYACGEAACVSVHGANRLGANSLLDLVVFGR-AVSHRVK 472
Query: 485 HKKSTSIDLS--ASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTT 542
S + AS+ ++ K L + T E+R +Q M V + R+
Sbjct: 473 EIASPGKPHAELASDAGAESI--KDLDTVRTAEGPKSTFEIRNAMQKTMQTDVSVFRTQE 530
Query: 543 SL-QTAE--WRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHES 599
SL + E ++D+L + T W V E E+RNL CA +A R ES
Sbjct: 531 SLDEGVEKITKVDQLFDQVGTKDRSMIWNSDLV--ETLELRNLLTCATQTAVAAANRKES 588
Query: 600 RGLHYMVDFP-HVEEN 614
RG H D+P +EN
Sbjct: 589 RGAHAREDYPDRDDEN 604
>UNIPROTKB|G3MY67 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0022904 "respiratory electron transport chain" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006105
"succinate metabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000104 "succinate dehydrogenase
activity" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005739 GO:GO:0007399
GO:GO:0050660 GO:GO:0006099 GO:GO:0022904 GO:GO:0000104 OMA:CFTADAT
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 GO:GO:0006105
GeneTree:ENSGT00390000010046 EMBL:DAAA02051474
Ensembl:ENSBTAT00000064827 Uniprot:G3MY67
Length = 677
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 200/609 (32%), Positives = 292/609 (47%)
Query: 38 CIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKY-FDFSVIGSGVAGLC 96
C + +W + F+F+ V N +S V + V + FD V+G+G AGL
Sbjct: 32 CTKWPAAWQTGTRSFHFT---VDGNKRSSAKVSDAISAQYPVVDHEFDAVVVGAGGAGLR 88
Query: 97 YALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVESHMQDTIVAGAYLCD 153
A +++ G A +TK P S+T AQGG++A L D+ H DT+ +L D
Sbjct: 89 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 148
Query: 154 DETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS--------HHRIVHAADM 205
+ + + + P + EL G F R EDG ++ GG S HR AD
Sbjct: 149 QDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADR 208
Query: 206 TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK 265
TG + L + + S F +FA+DLL ++ + C GV L +E + R ++
Sbjct: 209 TGHSLLHTLYGRSLRY-DTSYFVEYFALDLL--MESGE--CRGVIALCIEDGSIHRIRAR 263
Query: 266 VTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPK 325
T++A+GG G Y S T+ +TGDG AM RA ++EFVQFHPT + G
Sbjct: 264 NTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC----- 318
Query: 326 KTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVARSIDDQLKKRN--- 381
LITE RG+GGIL N ERFM Y A +LA RDVV+RS+ ++++
Sbjct: 319 -------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG 371
Query: 382 -EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQ 438
EK +V L + H P ++ P I+ + + G+D+T +PIPV+P HY GG+ +
Sbjct: 372 PEKDHVYLQLHHLPPAQLAMRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 431
Query: 439 GET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSIDHKKS 488
G+ N V GLY GE AC +HGANRL +NSLL+ +VF R A+ + +
Sbjct: 432 GQVLRHVNGQDQVVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPG 491
Query: 489 TSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAE 548
+ N +V+ +L N RT E+R +Q M + + R + LQ
Sbjct: 492 DKVPSIKPNAGEESVM--NLDKLRFANGSIRTSELRLNMQKSMQSHAAVFRVGSVLQEGC 549
Query: 549 WRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYM 605
+I L + F+ G W V E E++NL CA + A AR ESRG H
Sbjct: 550 EKISSLYGDLRHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIYGAEARKESRGAHAR 607
Query: 606 VDFPH-VEE 613
DF V+E
Sbjct: 608 EDFKERVDE 616
>UNIPROTKB|Q6PA58 [details] [associations]
symbol:sdha-a "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit A, mitochondrial" species:8355 "Xenopus
laevis" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0022904
"respiratory electron transport chain" evidence=ISS] [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005743 GO:GO:0050660 GO:GO:0006099
GO:GO:0022904 KO:K00234 GO:GO:0008177 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 EMBL:BC060446 RefSeq:NP_001083473.1
UniGene:Xl.83156 HSSP:P0AC41 ProteinModelPortal:Q6PA58 SMR:Q6PA58
PRIDE:Q6PA58 GeneID:398946 KEGG:xla:398946 HOVERGEN:HBG001461
GO:GO:0006105 Uniprot:Q6PA58
Length = 665
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 185/557 (33%), Positives = 274/557 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A ITK P S+T AQGG++A L D
Sbjct: 65 FDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEDDDWRW 124
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R E G ++ GG S
Sbjct: 125 HFYDTVKGSDWLGDQDAIHYMTEQAPASVIELENYGMPFSRTEQGKIYQRAFGGQSLKYG 184
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 185 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 239
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + RF +K T++A+GG G + S T+ +TGDG AM RA ++EFVQFH
Sbjct: 240 LCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFH 299
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 300 PTGIYGAGC------------LITEGCRGEGGILINSEGERFMERYAPVAKDLASRDVVS 347
Query: 371 RSIDDQLKK-----RNEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ +++ +V L + H P ++ S P I+ + + G+D+T +PIPV+P
Sbjct: 348 RSMTIEIREGRGCGKDKDHVYLQLHHLPPSQLASRLPGISETAMIFAGVDVTKEPIPVLP 407
Query: 425 AAHYMCGGVRAGLQGE--TNVRG-------LYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ T+V G LY GE A +HGANRL +NSLL+ +VF
Sbjct: 408 TVHYNMGGIPTNYKGQVITHVNGEDRVVPGLYSCGEAASASVHGANRLGANSLLDLVVFG 467
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + K ++ N +V +L N RT E+R +Q M +
Sbjct: 468 RACALSIAESCKPGEAVPSIKENAGEESVA--NLDKLRYANGSTRTSEIRINMQKTMQNH 525
Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R+ + L+ ++ + + + F+ G W V E E++NL CA ++
Sbjct: 526 AAVFRTGSVLKEGCEKLSVINSSMDDIKTFDRGIVWNTDLV--ETLELQNLMLCALQTIN 583
Query: 592 SALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 584 GAEARKESRGAHAREDY 600
>UNIPROTKB|Q8HXW3 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9541 "Macaca
fascicularis" [GO:0005739 "mitochondrion" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0022904
"respiratory electron transport chain" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 GO:GO:0006099 GO:GO:0022904
GO:GO:0005749 GO:GO:0008177 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 HOVERGEN:HBG001461 GO:GO:0006105 EMBL:AB083328
ProteinModelPortal:Q8HXW3 SMR:Q8HXW3 PRIDE:Q8HXW3 Uniprot:Q8HXW3
Length = 664
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 190/558 (34%), Positives = 276/558 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 62 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 121
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 122 HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFG 181
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL ++ + C GV
Sbjct: 182 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLL--MENRE--CRGVIA 236
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 237 LCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFH 296
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 297 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 344
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ + P I+ + + G+D+T +PIPV+P
Sbjct: 345 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLP 404
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSL + +VF
Sbjct: 405 TVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLWDLVVFG 464
Query: 476 RRAVQPSIDH--KKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWR 533
R A SI+ + + N +V+ +L + RT E+R +Q M
Sbjct: 465 R-ACALSIEESCRPGDKVPPIKPNAGEESVM--NLDKLRFADGSIRTSELRLSMQKSMQN 521
Query: 534 YVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVV 590
+ + R + LQ +I +L + + F+ G W V E E++NL CA +
Sbjct: 522 HAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTI 579
Query: 591 SSALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 580 YGAEARKESRGAHAREDY 597
>TIGR_CMR|CBU_1401 [details] [associations]
symbol:CBU_1401 "succinate dehydrogenase, flavoprotein
subunit" species:227377 "Coxiella burnetii RSA 493" [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005886 GO:GO:0050660 eggNOG:COG1053
GO:GO:0006099 GO:GO:0022900 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0000104 EMBL:L33409 HOGENOM:HOG000160475 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 PIR:I40849 RefSeq:NP_820386.1
ProteinModelPortal:P51054 SMR:P51054 PRIDE:P51054 GeneID:1209307
KEGG:cbu:CBU_1401 PATRIC:17931559 KO:K00239 OMA:VGCTAID
ProtClustDB:CLSK914756 BioCyc:CBUR227377:GJ7S-1389-MONOMER
Uniprot:P51054
Length = 587
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 187/560 (33%), Positives = 271/560 (48%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVA--KHGTVAVITKAEPHESNTNYAQGGVSAVL--CPSD 135
VK +D ++G+G AGL ALE+A + VAV++K P S+T AQGG++A L D
Sbjct: 6 VKQYDALIVGAGGAGLRAALEMAQSRQYKVAVVSKVFPTRSHTVSAQGGIAAALGNVVPD 65
Query: 136 SVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS 195
HM DT+ YL D + ++ +C + P + EL G F R +DG ++ GGH+
Sbjct: 66 KPIWHMFDTVKGSDYLGDQDAIQYMCEQAPPSVYELEHYGLPFSRLDDGRIYQRAFGGHT 125
Query: 196 H-------HRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHG 248
R AD TG + L + V + + + IDL+ G A G
Sbjct: 126 RDFGKEMARRTCACADRTGHAMLHTLYQKNV-EAGTHFYYEWYGIDLVRGAQGGIA---G 181
Query: 249 VDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFV 308
+ +N+ET E+V F S+ T+ A+GGAG IY +T+N TGDG+ M RA + +MEF
Sbjct: 182 MIAMNMETSELVFFKSRATIFATGGAGRIYETTSNAYTNTGDGIGMVLRAGLPVQDMEFW 241
Query: 309 QFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRD 367
QFHPT + G LITE RG+GG L N ERFM Y +L RD
Sbjct: 242 QFHPTGIYGVGC------------LITEGARGEGGYLINKDGERFMERYSPHLKDLDCRD 289
Query: 368 VVARSIDDQLKKRN-----EKYVLLDISHKPTEKIL-SHFPNIAAECLKYG-LDITSQPI 420
VVARSI ++ + +VLL + H EK+L P I K+ +DIT +PI
Sbjct: 290 VVARSILQEVMAGGGVGPKKDHVLLKLDHLG-EKVLRERLPGIIELSEKFANVDITKEPI 348
Query: 421 PVVPAAHYMCGGVRAGLQGET-----N-----VRGLYVAGEVACTGLHGANRLASNSLLE 470
P++P HYM GG+ + G+ N + GL+ AGE AC +HGANRL +NSLL+
Sbjct: 349 PILPTCHYMMGGIPTNIHGQALTVDENGKDQIIEGLFAAGECACVSVHGANRLGTNSLLD 408
Query: 471 ALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSI 530
+VF R A+ ++ T + + N L N + +R+E++
Sbjct: 409 LVVFGR-AIGLHLEEALKTELKHRSENPDDIDAAIARLKRWEKPNNVENPALLRQEMRKA 467
Query: 531 MWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTF--VGLEACEMRNLFCCAKL 588
M G+ R ++ R+ +L + +TF +EA E+ NL +
Sbjct: 468 MSEDFGVFREEQKMKQGLERLQKLNERLQRAKLTDT-SRTFNNARIEALELDNLMEVSYA 526
Query: 589 VVSSALARHESRGLHYMVDF 608
SA R ESRG H D+
Sbjct: 527 TAVSAQQRTESRGAHSRYDY 546
>GENEDB_PFALCIPARUM|PF10_0334 [details] [associations]
symbol:PF10_0334 "flavoprotein subunit of
succinate dehydrogenase" species:5833 "Plasmodium falciparum"
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=ISS] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 GO:GO:0006099
GO:GO:0022900 EMBL:AE014185 GO:GO:0005749 HOGENOM:HOG000160475
KO:K00234 GO:GO:0008177 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 OMA:VGCTAID
ProtClustDB:PTZ00139 HSSP:P10444 RefSeq:XP_001347618.1
ProteinModelPortal:Q8IJ66 PRIDE:Q8IJ66
EnsemblProtists:PF10_0334:mRNA GeneID:810491 KEGG:pfa:PF10_0334
EuPathDB:PlasmoDB:PF3D7_1034400 Uniprot:Q8IJ66
Length = 631
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 185/575 (32%), Positives = 281/575 (48%)
Query: 82 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVE 138
++D ++G+G AGL ALE++K+ VA I+K P S+T AQGG++A L D
Sbjct: 33 HYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNMTEDDWR 92
Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS--- 195
H DTI +L D + +C E PD + EL G F R +DG ++ GG S
Sbjct: 93 WHAYDTIKGSDWLGDQNAIHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKY 152
Query: 196 -----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
+R AAD TG + L +S N F +F +DLL L+ + C GV
Sbjct: 153 GKGGQAYRCAAAADRTGHAMLHTLYGQSLSY-NCIFFVEYFVLDLLM-LNSNE--CIGVI 208
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
+N+ ++ RF + T++A+GG G Y S T+ TGDG A+ R++ + ++EFVQF
Sbjct: 209 CINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQF 268
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVV 369
HPT + G LITE RG+GGIL N E FM Y +A +LA RDVV
Sbjct: 269 HPTGIYPAGC------------LITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVV 316
Query: 370 ARSIDDQLKKR-----NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVV 423
+R++ ++ ++ N ++ LD++H P E + P I + G+D+T Q IPV+
Sbjct: 317 SRAMTIEINEQRGCGPNADHIYLDLTHLPYETLKERLPGIMETAKIFAGVDVTKQYIPVL 376
Query: 424 PAAHYMCGGV-----------RAGLQGETN-------VRGLYVAGEVACTGLHGANRLAS 465
P HY GG+ +TN V+GLY AGE A +HGANRL +
Sbjct: 377 PTVHYNMGGIPTNYKTQVLTQNVNFNKQTNKSNEDIIVKGLYAAGEAASASVHGANRLGA 436
Query: 466 NSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRK 525
NSLL+ +VF +RA ++ K ++A+ + + ++ T ++RK
Sbjct: 437 NSLLDIVVFGKRAALTIMEIDKPNIPKINANTNIGEESIQRLDHIRFNKGSIQ-TSQLRK 495
Query: 526 ELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNL 582
++Q M ++ + R LQ +I E+ + ++ W LE E+ NL
Sbjct: 496 KMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDL--LETLELENL 553
Query: 583 FCCAKLVVSSALARHESRGLHYMVDFPHVEENKRL 617
A + +A+ R ESRG H DFP ++ L
Sbjct: 554 LTLASQTILAAVERKESRGAHARDDFPERDDKNYL 588
>UNIPROTKB|Q9YHT1 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0006105 "succinate metabolic process"
evidence=ISS] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0022904 "respiratory electron transport
chain" evidence=ISS] Reactome:REACT_115655 InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099
GO:GO:0022904 GO:GO:0005749 HOGENOM:HOG000160475 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 HOVERGEN:HBG001461
GO:GO:0006105 EMBL:CO635738 EMBL:AF095939 IPI:IPI00682371
UniGene:Gga.993 PDB:1YQ3 PDB:1YQ4 PDB:2FBW PDB:2H88 PDB:2H89
PDB:2WQY PDBsum:1YQ3 PDBsum:1YQ4 PDBsum:2FBW PDBsum:2H88
PDBsum:2H89 PDBsum:2WQY ProteinModelPortal:Q9YHT1 SMR:Q9YHT1
STRING:Q9YHT1 PRIDE:Q9YHT1 InParanoid:Q9YHT1 OrthoDB:EOG47H5PJ
EvolutionaryTrace:Q9YHT1 Uniprot:Q9YHT1
Length = 665
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 186/557 (33%), Positives = 273/557 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 63 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRW 122
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R E+G ++ GG S
Sbjct: 123 HFYDTVKGSDWLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFG 182
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 183 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 237
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + RF +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 238 LCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFH 297
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 298 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 345
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P +++ + P I+ + + G+D+T +PIPV+P
Sbjct: 346 RSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLP 405
Query: 425 AAHYMCGGVRAGLQGE--TNVRG-------LYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ T+V G LY GE A +HGANRL +NSLL+ +VF
Sbjct: 406 TVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFG 465
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + K + N +V +L + RT E R +Q M +
Sbjct: 466 RACALTIAETCKPGEPVPSIKPNAGEESVA--NLDKLRFADGTIRTSEARLNMQKTMQSH 523
Query: 535 VGIVRSTTSLQTAEWRIDELEAEW-ETYLFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R+ + LQ ++ ++ + F+ G W V E E++NL CA +
Sbjct: 524 AAVFRTGSILQEGCEKLSQIYCDLAHLKTFDRGIVWNTDLV--ETLELQNLMLCALQTIY 581
Query: 592 SALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 582 GAEARKESRGAHAREDY 598
>UNIPROTKB|Q8IJ66 [details] [associations]
symbol:PF10_0334 "Flavoprotein subunit of succinate
dehydrogenase" species:36329 "Plasmodium falciparum 3D7"
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=ISS] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 GO:GO:0006099
GO:GO:0022900 EMBL:AE014185 GO:GO:0005749 HOGENOM:HOG000160475
KO:K00234 GO:GO:0008177 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 OMA:VGCTAID
ProtClustDB:PTZ00139 HSSP:P10444 RefSeq:XP_001347618.1
ProteinModelPortal:Q8IJ66 PRIDE:Q8IJ66
EnsemblProtists:PF10_0334:mRNA GeneID:810491 KEGG:pfa:PF10_0334
EuPathDB:PlasmoDB:PF3D7_1034400 Uniprot:Q8IJ66
Length = 631
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 185/575 (32%), Positives = 281/575 (48%)
Query: 82 YFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVE 138
++D ++G+G AGL ALE++K+ VA I+K P S+T AQGG++A L D
Sbjct: 33 HYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNMTEDDWR 92
Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS--- 195
H DTI +L D + +C E PD + EL G F R +DG ++ GG S
Sbjct: 93 WHAYDTIKGSDWLGDQNAIHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKY 152
Query: 196 -----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
+R AAD TG + L +S N F +F +DLL L+ + C GV
Sbjct: 153 GKGGQAYRCAAAADRTGHAMLHTLYGQSLSY-NCIFFVEYFVLDLLM-LNSNE--CIGVI 208
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
+N+ ++ RF + T++A+GG G Y S T+ TGDG A+ R++ + ++EFVQF
Sbjct: 209 CINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQF 268
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVV 369
HPT + G LITE RG+GGIL N E FM Y +A +LA RDVV
Sbjct: 269 HPTGIYPAGC------------LITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVV 316
Query: 370 ARSIDDQLKKR-----NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVV 423
+R++ ++ ++ N ++ LD++H P E + P I + G+D+T Q IPV+
Sbjct: 317 SRAMTIEINEQRGCGPNADHIYLDLTHLPYETLKERLPGIMETAKIFAGVDVTKQYIPVL 376
Query: 424 PAAHYMCGGV-----------RAGLQGETN-------VRGLYVAGEVACTGLHGANRLAS 465
P HY GG+ +TN V+GLY AGE A +HGANRL +
Sbjct: 377 PTVHYNMGGIPTNYKTQVLTQNVNFNKQTNKSNEDIIVKGLYAAGEAASASVHGANRLGA 436
Query: 466 NSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRK 525
NSLL+ +VF +RA ++ K ++A+ + + ++ T ++RK
Sbjct: 437 NSLLDIVVFGKRAALTIMEIDKPNIPKINANTNIGEESIQRLDHIRFNKGSIQ-TSQLRK 495
Query: 526 ELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNL 582
++Q M ++ + R LQ +I E+ + ++ W LE E+ NL
Sbjct: 496 KMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDL--LETLELENL 553
Query: 583 FCCAKLVVSSALARHESRGLHYMVDFPHVEENKRL 617
A + +A+ R ESRG H DFP ++ L
Sbjct: 554 LTLASQTILAAVERKESRGAHARDDFPERDDKNYL 588
>UNIPROTKB|F1NPJ4 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006105 "succinate metabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0022904 "respiratory electron transport chain"
evidence=IEA] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005739 GO:GO:0050660
GO:GO:0006099 GO:GO:0022904 GO:GO:0000104 OMA:CFTADAT
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 GO:GO:0006105
GeneTree:ENSGT00390000010046 IPI:IPI00682371 EMBL:AADN02008176
Ensembl:ENSGALT00000021508 Uniprot:F1NPJ4
Length = 643
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 186/557 (33%), Positives = 273/557 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 41 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRW 100
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R E+G ++ GG S
Sbjct: 101 HFYDTVKGSDWLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFG 160
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 161 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 215
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + RF +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 216 LCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFH 275
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 276 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 323
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P +++ + P I+ + + G+D+T +PIPV+P
Sbjct: 324 RSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLP 383
Query: 425 AAHYMCGGVRAGLQGE--TNVRG-------LYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ T+V G LY GE A +HGANRL +NSLL+ +VF
Sbjct: 384 TVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFG 443
Query: 476 RR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
R A+ + K + N +V +L + RT E R +Q M +
Sbjct: 444 RACALTIAETCKPGEPVPSIKPNAGEESVA--NLDKLRFADGTIRTSEARLNMQKTMQSH 501
Query: 535 VGIVRSTTSLQTAEWRIDELEAEW-ETYLFEHG--WEQTFVGLEACEMRNLFCCAKLVVS 591
+ R+ + LQ ++ ++ + F+ G W V E E++NL CA +
Sbjct: 502 AAVFRTGSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLV--ETLELQNLMLCALQTIY 559
Query: 592 SALARHESRGLHYMVDF 608
A AR ESRG H D+
Sbjct: 560 GAEARKESRGAHAREDY 576
>FB|FBgn0261439 [details] [associations]
symbol:SdhA "Succinate dehydrogenase A" species:7227
"Drosophila melanogaster" [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=ISS;NAS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS;NAS] [GO:0004776
"succinate-CoA ligase (GDP-forming) activity" evidence=NAS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS;NAS]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0022900 "electron
transport chain" evidence=IMP] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 EMBL:AE013599 GO:GO:0005739 GO:GO:0005743
GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099 GO:GO:0022900 KO:K00234
OMA:CFTADAT GO:GO:0008177 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 CTD:6389
GeneTree:ENSGT00390000010046 EMBL:AY051472 EMBL:BT099627
EMBL:Y09064 RefSeq:NP_477210.1 RefSeq:NP_725881.1
RefSeq:NP_725882.1 UniGene:Dm.4591 ProteinModelPortal:Q94523
SMR:Q94523 DIP:DIP-19386N MINT:MINT-972926 STRING:Q94523
PaxDb:Q94523 PRIDE:Q94523 EnsemblMetazoa:FBtr0086552
EnsemblMetazoa:FBtr0086553 EnsemblMetazoa:FBtr0086554 GeneID:37228
KEGG:dme:Dmel_CG17246 FlyBase:FBgn0261439 InParanoid:Q94523
OrthoDB:EOG4XKSP0 PhylomeDB:Q94523 ChiTaRS:SdhA GenomeRNAi:37228
NextBio:802625 Bgee:Q94523 GermOnline:CG17246 Uniprot:Q94523
Length = 661
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 189/566 (33%), Positives = 277/566 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A + G AVITK P S+T AQGG++A L D +
Sbjct: 59 YDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKW 118
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
HM DT+ +L D + + + E P + EL G F R +DG ++ GG S
Sbjct: 119 HMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLKFG 178
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L +S + + F +FA+DL+ D C GV
Sbjct: 179 KGGQAHRCCAVADRTGHSLLHTLYGQSLSY-DCNYFVEYFALDLIFE----DGECRGVLA 233
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
LN+E + RF +K T++A+GG G + S T+ TGDG AM R ++EFVQFH
Sbjct: 234 LNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFH 293
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GG L N ERFM Y A +LA RDVV+
Sbjct: 294 PTGIYGAGC------------LITEGCRGEGGYLINGNGERFMERYAPVAKDLASRDVVS 341
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++ + EK +V L + H P +++ P I+ + + G+D+T +PIPV+P
Sbjct: 342 RSMTIEIMEGRGAGPEKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPVLP 401
Query: 425 AAHYMCGGVRAGLQGETN----------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GGV +G+ V GLY AGE A + +HGANRL +NSLL+ +VF
Sbjct: 402 TVHYNMGGVPTNYRGQVITIDKDGKDVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVF 461
Query: 475 ARRAVQPSID-HKKSTSIDLSASNWWTRTVVPKSLGCNVMH-NILRRTKEVRKELQSIMW 532
R + + +K N +V +L + H N T ++R ++Q M
Sbjct: 462 GRACAKTIAELNKPGAPAPTLKENAGEASVA--NLD-KLRHANGQITTADLRLKMQKTMQ 518
Query: 533 RYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLV 589
+ + R LQ ++ E+ +++ + + W V E E++NL A++
Sbjct: 519 HHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWNSDLV--ETLELQNLLANAQMT 576
Query: 590 VSSALARHESRGLHYMVDFPHVEENK 615
+ SA AR ESRG H DF V E++
Sbjct: 577 IVSAEARKESRGAHAREDFK-VREDE 601
>UNIPROTKB|P31039 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0005743 "mitochondrial inner membrane" evidence=ISS;TAS]
[GO:0055114 "oxidation-reduction process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS] [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] [GO:0006099 "tricarboxylic
acid cycle" evidence=IEA] [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] Reactome:REACT_115420
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 GO:GO:0006099
GO:GO:0022900 GO:GO:0055114 GO:GO:0005749 KO:K00234 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 HOVERGEN:HBG001461 CTD:6389
EMBL:M60879 EMBL:AF139922 IPI:IPI00686177 PIR:A42792
RefSeq:NP_776603.1 UniGene:Bt.24449 ProteinModelPortal:P31039
SMR:P31039 IntAct:P31039 PRIDE:P31039 GeneID:281480 KEGG:bta:281480
NextBio:20805455 Uniprot:P31039
Length = 665
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 198/609 (32%), Positives = 290/609 (47%)
Query: 38 CIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKY-FDFSVIGSGVAGLC 96
C + +W + F+F+ V N +S V + V + FD V+G+G AGL
Sbjct: 20 CTKWSAAWQTGTRSFHFT---VDGNKRSSAKVSDAISAQYPVVDHEFDAVVVGAGGAGLR 76
Query: 97 YALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVESHMQDTIVAGAYLCD 153
A +++ G A +TK P S+T AQGG++A L D+ H DT+ +L D
Sbjct: 77 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 136
Query: 154 DETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS--------HHRIVHAADM 205
+ + + + P + EL G F R EDG ++ GG S HR AD
Sbjct: 137 QDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADR 196
Query: 206 TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK 265
TG + L + + S F +FA+DLL ++ + C GV L +E + R ++
Sbjct: 197 TGHSLLHTLYGRSLRY-DTSYFVEYFALDLL--MESGE--CRGVIALCIEDGSIHRIRAR 251
Query: 266 VTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPK 325
T++A+GG G Y S T+ +TGDG AM RA ++EFVQFHPT + G
Sbjct: 252 NTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC----- 306
Query: 326 KTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVARSIDDQLKKRN--- 381
LITE RG+GGIL N ERFM Y A +LA RDVV+RS+ ++++
Sbjct: 307 -------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG 359
Query: 382 -EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQ 438
EK +V L + H P ++ P I+ + + G+D+T +PIPV+P HY GG+ +
Sbjct: 360 PEKDHVYLQLHHLPPAQLAMRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 419
Query: 439 GET---------NVRGLYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSIDHKKS 488
G+ V GLY GE AC +HGANRL +NSLL+ +VF R A+ + +
Sbjct: 420 GQVLRHVNGQDQGVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPG 479
Query: 489 TSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAE 548
+ N +V+ +L N RT E+R +Q M + + R + LQ
Sbjct: 480 DKVPSIKPNAGEESVM--NLDKLRFANGSIRTSELRLNMQKSMQSHAAVFRVGSVLQEGC 537
Query: 549 WRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYM 605
+I L + F+ G W V E E++NL CA + A AR ESRG
Sbjct: 538 EKISSLYGDLRHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIYGAEARKESRGGPRR 595
Query: 606 VDFPH-VEE 613
DF V+E
Sbjct: 596 EDFKERVDE 604
>SGD|S000001631 [details] [associations]
symbol:SDH1 "Flavoprotein subunit of succinate dehydrogenase"
species:4932 "Saccharomyces cerevisiae" [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IEA;IGI;IMP;IDA]
[GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA;IMP;IDA] [GO:0005749 "mitochondrial respiratory chain
complex II" evidence=IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;IC] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0045333 "cellular
respiration" evidence=IGI;IMP] [GO:0006121 "mitochondrial electron
transport, succinate to ubiquinone" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016627 "oxidoreductase activity,
acting on the CH-CH group of donors" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IDA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
SGD:S000001631 Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053
GO:GO:0006099 EMBL:BK006944 EMBL:Z26877 GO:GO:0005749 GO:GO:0006121
EMBL:M94874 EMBL:M86909 HOGENOM:HOG000160475 KO:K00234
GO:GO:0008177 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812
OrthoDB:EOG41G6C9 EMBL:M86746 EMBL:Z28148 PIR:S34793
RefSeq:NP_012774.1 PDB:1ORZ PDB:1PB4 PDBsum:1ORZ PDBsum:1PB4
ProteinModelPortal:Q00711 SMR:Q00711 DIP:DIP-5853N IntAct:Q00711
STRING:Q00711 PaxDb:Q00711 PeptideAtlas:Q00711 EnsemblFungi:YKL148C
GeneID:853709 KEGG:sce:YKL148C CYGD:YKL148c
GeneTree:ENSGT00700000105263 OMA:NIRTISF NextBio:974713
Genevestigator:Q00711 GermOnline:YKL148C Uniprot:Q00711
Length = 640
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 190/571 (33%), Positives = 278/571 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D VIG+G AGL A +A+ G A I+K P S+T AQGG++A L D+ +
Sbjct: 53 YDCVVIGAGGAGLRAAFGLAEAGYKTACISKLFPTRSHTVAAQGGINAALGNMHKDNWKW 112
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
HM DT+ +L D +++ + E P I EL G F R E+G ++ GG +
Sbjct: 113 HMYDTVKGSDWLGDQDSIHYMTREAPKSIIELEHYGVPFSRTENGKIYQRAFGGQTKEYG 172
Query: 197 -----HRIVHAADMTGREIERALL-EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
+R AD TG + L +A+ D + F +FA+DLLT +G + V GV
Sbjct: 173 KGAQAYRTCAVADRTGHALLHTLYGQALRHDTHF--FIEYFALDLLTH-NG-EVV--GVI 226
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
N E + RF + T++A+GG G Y S T+ TGDG AM RA + ++EFVQF
Sbjct: 227 AYNQEDGTIHRFRAHKTIIATGGYGRAYFSCTSAHTCTGDGNAMVSRAGFPLQDLEFVQF 286
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVV 369
HP+ + G LITE RG+GG L N ERFM Y A +LA RDVV
Sbjct: 287 HPSGIYGSGC------------LITEGARGEGGFLVNSEGERFMERYAPTAKDLACRDVV 334
Query: 370 ARSIDDQLKK-----RNEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVV 423
+R+I ++++ + + ++ L +SH P E + P I+ + G+D+T +PIP++
Sbjct: 335 SRAITMEIREGRGVGKKKDHMYLQLSHLPPEVLKERLPGISETAAIFAGVDVTKEPIPII 394
Query: 424 PAAHYMCGGVRAGLQGE-------TN----VRGLYVAGEVACTGLHGANRLASNSLLEAL 472
P HY GG+ GE T + GL GE AC +HGANRL +NSLL+ +
Sbjct: 395 PTVHYNMGGIPTKWNGEALTIDEETGEDKVIPGLMACGEAACVSVHGANRLGANSLLDLV 454
Query: 473 VFARRA-------VQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRK 525
VF R +QP + HK S DL + + + G R T E+R
Sbjct: 455 VFGRAVAHTVADTLQPGLPHKPLPS-DLGKESIANLDKLRNANGS-------RSTAEIRM 506
Query: 526 ELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNL 582
++ M + V + R+ +SL I +E ++ W V E E++NL
Sbjct: 507 NMKQTMQKDVSVFRTQSSLDEGVRNITAVEKTFDDVKTTDRSMIWNSDLV--ETLELQNL 564
Query: 583 FCCAKLVVSSALARHESRGLHYMVDFPHVEE 613
CA SA R ESRG H D+P+ ++
Sbjct: 565 LTCASQTAVSAANRKESRGAHAREDYPNRDD 595
>WB|WBGene00015391 [details] [associations]
symbol:sdha-1 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223 InterPro:IPR003953
Pfam:PF00890 GO:GO:0009792 GO:GO:0040010 GO:GO:0005743
GO:GO:0050660 eggNOG:COG1053 GO:GO:0010171 GO:GO:0006099
GO:GO:0022900 HOGENOM:HOG000160475 KO:K00234 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 EMBL:D30651 EMBL:FO080313
PIR:T15398 PIR:T41753 RefSeq:NP_509446.1 ProteinModelPortal:Q09508
SMR:Q09508 STRING:Q09508 World-2DPAGE:0020:Q09508 PaxDb:Q09508
EnsemblMetazoa:C03G5.1.1 EnsemblMetazoa:C03G5.1.2 GeneID:181108
KEGG:cel:CELE_C03G5.1 UCSC:C03G5.1.2 CTD:181108 WormBase:C03G5.1
GeneTree:ENSGT00390000010046 InParanoid:Q09508 OMA:LMANAIT
NextBio:912432 Uniprot:Q09508
Length = 646
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 192/567 (33%), Positives = 279/567 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A+ +A+ G AVITK P S+T AQGG++A L D+
Sbjct: 43 YDAVVVGAGGAGLRAAMGLAEGGLKTAVITKLFPTRSHTVAAQGGINAALGNMNPDNWRW 102
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
H DT+ +L D + + + E + EL G F R DG ++ GG S+
Sbjct: 103 HFYDTVKGSDWLGDQDAIHYMTREAERAVIELENYGMPFSRTTDGKIYQRAFGGQSNDFG 162
Query: 197 -----HRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L A + N + F +FA+DL+ + VC GV
Sbjct: 163 RGGQAHRTCCVADRTGHSLLHTLYGASLQY-NCNYFVEYFALDLIME----NGVCVGVIA 217
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
+++E + RF SK T+LA+GG G + S T+ TGDG A+ RA S+MEFVQFH
Sbjct: 218 MDLEDGTIHRFRSKNTVLATGGYGRAFFSCTSAHTCTGDGTALTARAGINNSDMEFVQFH 277
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GG L N ERFM Y A +LA RDVV+
Sbjct: 278 PTGIYGAGC------------LITEGSRGEGGYLVNSAGERFMERYAPNAKDLASRDVVS 325
Query: 371 RSIDDQLKKR-----NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++ + ++ ++ L + H P E++ P I+ + + G+D+T +PIPV+P
Sbjct: 326 RSMTVEIMEGRGVGPDKDHIYLQLHHLPAEQLQQRLPGISETAMIFAGVDVTKEPIPVIP 385
Query: 425 AAHYMCGGVRAGLQGET-N---------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GGV +G+ N V GLY AGE +HGANRL +NSLL+ ++F
Sbjct: 386 TVHYNMGGVPTNYKGQVLNYTPKKGDEVVPGLYAAGECGAHSVHGANRLGANSLLDLVIF 445
Query: 475 ARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNI--LRRTK------EVRKE 526
R +ID K+TS + +PK+ G + NI LR K E+R
Sbjct: 446 GRAC---AIDILKNTSAGVGVPE------LPKNAGEASVANIDKLRHNKGDISTAELRLT 496
Query: 527 LQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYL--FEHG--WEQTFVGLEACEMRNL 582
+Q M + + R L+ + +L + + +L + G W + E E++NL
Sbjct: 497 MQKSMQNHAAVFRRGDILKEGVKVLSKLYKD-QAHLNVADKGLVWNSDLI--ETLELQNL 553
Query: 583 FCCAKLVVSSALARHESRGLHYMVDFP 609
A + +A R ESRG H DFP
Sbjct: 554 LINATQTIVAAENREESRGAHARDDFP 580
>UNIPROTKB|Q09508 [details] [associations]
symbol:sdha-1 "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:6239 "Caenorhabditis
elegans" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 UniPathway:UPA00223
InterPro:IPR003953 Pfam:PF00890 GO:GO:0009792 GO:GO:0040010
GO:GO:0005743 GO:GO:0050660 eggNOG:COG1053 GO:GO:0010171
GO:GO:0006099 GO:GO:0022900 HOGENOM:HOG000160475 KO:K00234
GO:GO:0008177 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 EMBL:D30651
EMBL:FO080313 PIR:T15398 PIR:T41753 RefSeq:NP_509446.1
ProteinModelPortal:Q09508 SMR:Q09508 STRING:Q09508
World-2DPAGE:0020:Q09508 PaxDb:Q09508 EnsemblMetazoa:C03G5.1.1
EnsemblMetazoa:C03G5.1.2 GeneID:181108 KEGG:cel:CELE_C03G5.1
UCSC:C03G5.1.2 CTD:181108 WormBase:C03G5.1
GeneTree:ENSGT00390000010046 InParanoid:Q09508 OMA:LMANAIT
NextBio:912432 Uniprot:Q09508
Length = 646
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 192/567 (33%), Positives = 279/567 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A+ +A+ G AVITK P S+T AQGG++A L D+
Sbjct: 43 YDAVVVGAGGAGLRAAMGLAEGGLKTAVITKLFPTRSHTVAAQGGINAALGNMNPDNWRW 102
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
H DT+ +L D + + + E + EL G F R DG ++ GG S+
Sbjct: 103 HFYDTVKGSDWLGDQDAIHYMTREAERAVIELENYGMPFSRTTDGKIYQRAFGGQSNDFG 162
Query: 197 -----HRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L A + N + F +FA+DL+ + VC GV
Sbjct: 163 RGGQAHRTCCVADRTGHSLLHTLYGASLQY-NCNYFVEYFALDLIME----NGVCVGVIA 217
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
+++E + RF SK T+LA+GG G + S T+ TGDG A+ RA S+MEFVQFH
Sbjct: 218 MDLEDGTIHRFRSKNTVLATGGYGRAFFSCTSAHTCTGDGTALTARAGINNSDMEFVQFH 277
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GG L N ERFM Y A +LA RDVV+
Sbjct: 278 PTGIYGAGC------------LITEGSRGEGGYLVNSAGERFMERYAPNAKDLASRDVVS 325
Query: 371 RSIDDQLKKR-----NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++ + ++ ++ L + H P E++ P I+ + + G+D+T +PIPV+P
Sbjct: 326 RSMTVEIMEGRGVGPDKDHIYLQLHHLPAEQLQQRLPGISETAMIFAGVDVTKEPIPVIP 385
Query: 425 AAHYMCGGVRAGLQGET-N---------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GGV +G+ N V GLY AGE +HGANRL +NSLL+ ++F
Sbjct: 386 TVHYNMGGVPTNYKGQVLNYTPKKGDEVVPGLYAAGECGAHSVHGANRLGANSLLDLVIF 445
Query: 475 ARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNI--LRRTK------EVRKE 526
R +ID K+TS + +PK+ G + NI LR K E+R
Sbjct: 446 GRAC---AIDILKNTSAGVGVPE------LPKNAGEASVANIDKLRHNKGDISTAELRLT 496
Query: 527 LQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYL--FEHG--WEQTFVGLEACEMRNL 582
+Q M + + R L+ + +L + + +L + G W + E E++NL
Sbjct: 497 MQKSMQNHAAVFRRGDILKEGVKVLSKLYKD-QAHLNVADKGLVWNSDLI--ETLELQNL 553
Query: 583 FCCAKLVVSSALARHESRGLHYMVDFP 609
A + +A R ESRG H DFP
Sbjct: 554 LINATQTIVAAENREESRGAHARDDFP 580
>CGD|CAL0005198 [details] [associations]
symbol:SDH12 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=IDA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 CGD:CAL0005198
Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099
GO:GO:0022900 GO:GO:0016627 HOGENOM:HOG000160475 KO:K00234
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715528.1 RefSeq:XP_715584.1
ProteinModelPortal:Q5A1E8 SMR:Q5A1E8 STRING:Q5A1E8 GeneID:3642720
GeneID:3642775 KEGG:cal:CaO19.10389 KEGG:cal:CaO19.2871
Uniprot:Q5A1E8
Length = 641
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 186/572 (32%), Positives = 272/572 (47%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A + G A ++K P S+T AQGG++A L +D
Sbjct: 55 YDCVVVGAGGAGLRAAFGLVSEGFKTACVSKLFPTRSHTVAAQGGINAALGNMHADDWHW 114
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
H DT+ +L D + + + E P I EL G F R ++G ++ GG S
Sbjct: 115 HFYDTVKGSDWLGDQDAIHYMTKEAPASIYELEHYGVPFSRNDEGRIYQRAFGGQSKEFG 174
Query: 197 -----HRIVHAADMTGREIERALL-EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
+R AD TG + +L +++ D + F FA+DL+ D C G+
Sbjct: 175 KGGQAYRTCAVADRTGHALLHSLYGQSLRHDCHF--FIEFFAMDLMMK----DGACIGII 228
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
N E + RF + T++A+GG G Y S T+ TGDG AM RA + ++EFVQF
Sbjct: 229 AYNEEDGTLHRFFANRTIMATGGYGRAYFSCTSAHTCTGDGYAMVSRAGLPLEDLEFVQF 288
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVV 369
HP+ + G LITE RG+GG L N ERFM Y A +LA RDVV
Sbjct: 289 HPSGIYGSGC------------LITEGARGEGGFLVNSEGERFMERYAPSAKDLASRDVV 336
Query: 370 ARSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVV 423
+R+I ++ + EK ++ L +SH P + P I+ + G+D+T +PIP++
Sbjct: 337 SRAITMEINEGRGVGPEKDHMYLQLSHIPAPVLKERLPGISETAHIFAGVDVTKEPIPIL 396
Query: 424 PAAHYMCGGVRAGLQGET-------N---VRGLYVAGEVACTGLHGANRLASNSLLEALV 473
P HY GG+ +GE N V GL GE AC +HGANRL +NSLL+ +V
Sbjct: 397 PTVHYNMGGIPTNWKGEVLKKSADGNDEVVPGLLACGEAACASVHGANRLGANSLLDLVV 456
Query: 474 FARRAVQPSIDH-KKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMW 532
F R D+ + T I A + ++ N N + T ++R E+Q M
Sbjct: 457 FGRAVAHTIRDNLQPGTPIPDHAKDIGYESIANLDKLRNA--NGSKPTADIRLEMQKTMQ 514
Query: 533 RYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLV 589
+ + R+ +L I E++ +E W V E E++NL CA
Sbjct: 515 KGCAVFRTQETLDQCVEHIGEVDKSFEDVKTTDRSMIWNSDLV--ETLELQNLLTCATQT 572
Query: 590 VSSALARHESRGLHYMVDFPHVEE-NKRLPTI 620
+SA AR ESRG H DFP ++ N R T+
Sbjct: 573 AASAAARTESRGAHSRDDFPDRDDVNWRKHTL 604
>UNIPROTKB|Q5A1E8 [details] [associations]
symbol:SDH12 "Putative uncharacterized protein SDH1"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=IDA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 CGD:CAL0005198
Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099
GO:GO:0022900 GO:GO:0016627 HOGENOM:HOG000160475 KO:K00234
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715528.1 RefSeq:XP_715584.1
ProteinModelPortal:Q5A1E8 SMR:Q5A1E8 STRING:Q5A1E8 GeneID:3642720
GeneID:3642775 KEGG:cal:CaO19.10389 KEGG:cal:CaO19.2871
Uniprot:Q5A1E8
Length = 641
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 186/572 (32%), Positives = 272/572 (47%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL A + G A ++K P S+T AQGG++A L +D
Sbjct: 55 YDCVVVGAGGAGLRAAFGLVSEGFKTACVSKLFPTRSHTVAAQGGINAALGNMHADDWHW 114
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
H DT+ +L D + + + E P I EL G F R ++G ++ GG S
Sbjct: 115 HFYDTVKGSDWLGDQDAIHYMTKEAPASIYELEHYGVPFSRNDEGRIYQRAFGGQSKEFG 174
Query: 197 -----HRIVHAADMTGREIERALL-EAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
+R AD TG + +L +++ D + F FA+DL+ D C G+
Sbjct: 175 KGGQAYRTCAVADRTGHALLHSLYGQSLRHDCHF--FIEFFAMDLMMK----DGACIGII 228
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
N E + RF + T++A+GG G Y S T+ TGDG AM RA + ++EFVQF
Sbjct: 229 AYNEEDGTLHRFFANRTIMATGGYGRAYFSCTSAHTCTGDGYAMVSRAGLPLEDLEFVQF 288
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVV 369
HP+ + G LITE RG+GG L N ERFM Y A +LA RDVV
Sbjct: 289 HPSGIYGSGC------------LITEGARGEGGFLVNSEGERFMERYAPSAKDLASRDVV 336
Query: 370 ARSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVV 423
+R+I ++ + EK ++ L +SH P + P I+ + G+D+T +PIP++
Sbjct: 337 SRAITMEINEGRGVGPEKDHMYLQLSHIPAPVLKERLPGISETAHIFAGVDVTKEPIPIL 396
Query: 424 PAAHYMCGGVRAGLQGET-------N---VRGLYVAGEVACTGLHGANRLASNSLLEALV 473
P HY GG+ +GE N V GL GE AC +HGANRL +NSLL+ +V
Sbjct: 397 PTVHYNMGGIPTNWKGEVLKKSADGNDEVVPGLLACGEAACASVHGANRLGANSLLDLVV 456
Query: 474 FARRAVQPSIDH-KKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMW 532
F R D+ + T I A + ++ N N + T ++R E+Q M
Sbjct: 457 FGRAVAHTIRDNLQPGTPIPDHAKDIGYESIANLDKLRNA--NGSKPTADIRLEMQKTMQ 514
Query: 533 RYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLV 589
+ + R+ +L I E++ +E W V E E++NL CA
Sbjct: 515 KGCAVFRTQETLDQCVEHIGEVDKSFEDVKTTDRSMIWNSDLV--ETLELQNLLTCATQT 572
Query: 590 VSSALARHESRGLHYMVDFPHVEE-NKRLPTI 620
+SA AR ESRG H DFP ++ N R T+
Sbjct: 573 AASAAARTESRGAHSRDDFPDRDDVNWRKHTL 604
>TIGR_CMR|SPO_0360 [details] [associations]
symbol:SPO_0360 "succinate dehydrogenase, flavoprotein
subunit" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0006099
GO:GO:0022900 GO:GO:0000104 HOGENOM:HOG000160475 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 OMA:LMANAIT KO:K00239 ProtClustDB:PRK09078
RefSeq:YP_165623.1 ProteinModelPortal:Q5LXE8 SMR:Q5LXE8
GeneID:3196466 KEGG:sil:SPO0360 PATRIC:23373979 Uniprot:Q5LXE8
Length = 601
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 186/574 (32%), Positives = 277/574 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVLCPS--DSVES 139
+D V+G+G AGL L +A+ G A +TK P S+T AQGG++A L D +
Sbjct: 11 YDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPTRSHTVAAQGGIAASLSNMGPDHWQW 70
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-- 197
HM DT+ +L D + + + E P + EL G F R E+G ++ GGH+
Sbjct: 71 HMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQRPFGGHTTEFG 130
Query: 198 ------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
R AAD TG I L + + N + +FAIDL+ + DG C GV
Sbjct: 131 EGPAVQRTCAAADRTGHAILHTLYGQSLKN-NAEFYIEYFAIDLIMSEDGQ---CQGVVC 186
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
++ F +K+ +LA+GG G Y S T+ TGDG M RA + +MEFVQFH
Sbjct: 187 WKLDDGTFHVFNAKMVVLATGGYGRAYFSATSAHTCTGDGGGMVARAGLALQDMEFVQFH 246
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERAELAPRDVVA 370
PT + G LITE RG+GG L N ERFM Y + +LAPRD V+
Sbjct: 247 PTGIYGSGC------------LITEGARGEGGYLTNSEGERFMERYAPQYKDLAPRDYVS 294
Query: 371 RSIDDQLKK-----RNEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ ++ ++ L++SH P E + P I+ + G+D+T +PIPV+P
Sbjct: 295 RSMTMEIREGRGVGKDGDHIHLNLSHLPAEALAERLPGISESAKIFAGVDVTKEPIPVLP 354
Query: 425 AAHYMCGGVRAGLQGET-N---------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GG+ GE N V GL GE C +HGANRL SNSL++ +VF
Sbjct: 355 TVHYNMGGIPTNYWGEVLNPTADNPTAIVPGLMAVGEAGCASVHGANRLGSNSLIDLVVF 414
Query: 475 ARR-AVQPS--IDHKKSTSIDLSASNWWTRTVVPKSLGC-NVMHNILRRTKEVRKELQSI 530
R A++ +D + + + AS + G N ++ T ++R E+Q
Sbjct: 415 GRASAIRAGKVVDPEAANPVLNLAS---VEKAFDRFDGLRNAKGSVA--TADLRLEMQKT 469
Query: 531 MWRYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAK 587
M + R+ ++ ++ + A+ + + + W +E E+ NL A
Sbjct: 470 MQADAAVFRTAKTMAEGVEKMTAIAAKMDDLSVTDRSLVWNSDL--METLELTNLMPSAL 527
Query: 588 LVVSSALARHESRGLHYMVDFP-HVEENKRLPTI 620
+ A AR ESRG H DFP +EN R+ TI
Sbjct: 528 ATIVGAEARKESRGAHAHEDFPTRDDENWRVHTI 561
>UNIPROTKB|Q0BX75 [details] [associations]
symbol:sdhA "Succinate dehydrogenase, flavoprotein subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0045282 "plasma
membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099
GO:GO:0022900 EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 OMA:LMANAIT
KO:K00239 GO:GO:0045282 RefSeq:YP_761918.1
ProteinModelPortal:Q0BX75 SMR:Q0BX75 STRING:Q0BX75 GeneID:4288246
KEGG:hne:HNE_3245 PATRIC:32219371 ProtClustDB:PRK09078
BioCyc:HNEP228405:GI69-3247-MONOMER Uniprot:Q0BX75
Length = 595
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 188/559 (33%), Positives = 269/559 (48%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G +GL AL A+ G A ITK P S+T AQGG++A L DS +
Sbjct: 11 YDVVVVGAGGSGLRAALGAAQAGLRTACITKVFPTRSHTVAAQGGIAASLGNMSDDSWQW 70
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-- 197
HM DT+ +L D + + + PD + EL G F R E+G ++ GG + +
Sbjct: 71 HMYDTVKGSDWLGDQDAIEYLVRNAPDAVYELEHWGMPFSRTEEGKIYQRAFGGMTRNFG 130
Query: 198 -----RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTL 252
R AAD TG + L V + F +FA+DL+ DG VC GV
Sbjct: 131 EGPVQRTCAAADRTGHAMLHTLYGQCVREET-EFFIEYFALDLIMDDDG---VCRGVTAW 186
Query: 253 NVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHP 312
++ + RF ++ T+LA+GG G Y S T+ TGDG AM RA + +MEFVQFHP
Sbjct: 187 KLDDGTLHRFRAQKTILATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPLQDMEFVQFHP 246
Query: 313 TALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVAR 371
T + G LITE RG+GG L N ERFM Y A +LA RDVV+R
Sbjct: 247 TGIYGSGC------------LITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSR 294
Query: 372 SIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPA 425
++ +++ EK ++ L ++H E + P I+ + G+D+T +PIPV+P
Sbjct: 295 AMTMEIRDGRGVGPEKDHIFLHLNHLAPETLHERLPGISETAKIFAGVDVTKEPIPVLPT 354
Query: 426 AHYMCGGVRAGLQGET----N------VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ GE N V GL GE AC +HGANRL SNSL++ +VF
Sbjct: 355 VHYNMGGIPTNFHGEVLTKKNGDPDAVVPGLMAVGEAACVSVHGANRLGSNSLIDLVVFG 414
Query: 476 RRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLG-CNVMHNIL--RRTKEVRKELQSIMW 532
R A + +T +T + + M N + ++R E+Q M
Sbjct: 415 RAA---GLRCGATTEAGARQPGL-AKTATDSHIARLDKMRNATGDQPVAKLRLEMQRAMQ 470
Query: 533 RYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLV 589
+ R+ + L+ I+++ + + + G W V EA E NL C A +
Sbjct: 471 SNCAVFRTGSVLKEGVDAIEDVYKKLPGIDVKDRGMVWNTDLV--EALEFENLICQAAVT 528
Query: 590 VSSALARHESRGLHYMVDF 608
V+SA R ESRG H DF
Sbjct: 529 VNSAANREESRGAHAREDF 547
>TIGR_CMR|ECH_0315 [details] [associations]
symbol:ECH_0315 "succinate dehydrogenase, flavoprotein
subunit" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0045282 "plasma
membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 EMBL:CP000236 GenomeReviews:CP000236_GR
eggNOG:COG1053 GO:GO:0006099 GO:GO:0022900 GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 OMA:LMANAIT
KO:K00239 ProtClustDB:PRK09078 RefSeq:YP_507136.1
ProteinModelPortal:Q2GHE7 SMR:Q2GHE7 STRING:Q2GHE7 GeneID:3928026
KEGG:ech:ECH_0315 PATRIC:20576133
BioCyc:ECHA205920:GJNR-315-MONOMER Uniprot:Q2GHE7
Length = 598
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 183/570 (32%), Positives = 271/570 (47%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D ++G+G AGL + G +VA I+K P S+T AQGG+SA L D
Sbjct: 13 YDVVIVGAGGAGLRATFGMTNVGLSVACISKVFPTRSHTVAAQGGISAALGNVSEDDWRW 72
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-- 197
HM DT+ +L D + + +C + + EL G F R DG ++ GG +
Sbjct: 73 HMFDTVKGSDWLGDQDAIEYMCKNAAEAVIELERYGVPFSRTSDGKIYQRPFGGMTTEFG 132
Query: 198 ------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
R A+D TG I L + + N F +FAIDL+ +G C GV
Sbjct: 133 KGKPAVRTCAASDKTGHAILHTLYQQSLKY-NAKFFVEYFAIDLIMDEEGQ---CKGVLA 188
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
++ + RF + + +LA+GG G IY S T+ TGDG M R + +MEFVQFH
Sbjct: 189 WSLCDGTLHRFRAHIVVLATGGYGRIYFSATSAHTCTGDGGGMVSRINLPLEDMEFVQFH 248
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GG L N ERFM Y +A +LA RDVV+
Sbjct: 249 PTGIYGAGC------------LITEGCRGEGGYLINSEGERFMERYAPKAKDLASRDVVS 296
Query: 371 RSIDDQLKKRN-----EKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
R++ ++++ + +V L ISH + I P I + G+D+ +PIPV+P
Sbjct: 297 RAMTLEIREGRGVGPKKDHVYLSISHLGAKVISERLPGIRETARTFAGVDVIKEPIPVLP 356
Query: 425 AAHYMCGGVRAGLQGE----TN-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ GE +N + GL+ GE AC +HGANRL SNSLL+ +VF
Sbjct: 357 TVHYNMGGIPTNYHGEVVTLSNNTEQIIPGLFAIGEAACVSVHGANRLGSNSLLDLVVFG 416
Query: 476 RRA-------VQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQ 528
R A ++P + H + S+ W ++ + LR E+R +Q
Sbjct: 417 RAAAIRAKELIKPGMLH---APVQKSSEEW----IIDRFDALRFSKGSLR-VSEIRSNMQ 468
Query: 529 SIMWRYVGIVRSTTSLQTAEWRIDEL-EAEWETYLFEHG--WEQTFVGLEACEMRNLFCC 585
++M + + R+ L+ + +I + E+ E + + W V EA E+ N+
Sbjct: 469 NVMQNHAAVFRTEEVLEEGKQKIRSVAESLSEIAVKDRSMIWNSDLV--EALELTNMMPQ 526
Query: 586 AKLVVSSALARHESRGLHYMVDFP-HVEEN 614
A + + A R ESRG H DFP +EN
Sbjct: 527 AVVTMECAANRQESRGAHAREDFPDRDDEN 556
>WB|WBGene00016392 [details] [associations]
symbol:sdha-2 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0050660 eggNOG:COG1053
GO:GO:0006099 GO:GO:0022900 GO:GO:0016627 HOGENOM:HOG000160475
KO:K00234 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 GeneTree:ENSGT00390000010046
EMBL:FO080220 PIR:T32885 RefSeq:NP_492798.1 HSSP:P10444
ProteinModelPortal:O44954 SMR:O44954 STRING:O44954 PaxDb:O44954
EnsemblMetazoa:C34B2.7.1 EnsemblMetazoa:C34B2.7.2 GeneID:172968
KEGG:cel:CELE_C34B2.7 UCSC:C34B2.7.1 CTD:172968 WormBase:C34B2.7
InParanoid:O44954 OMA:SIYKEQQ NextBio:877725 Uniprot:O44954
Length = 640
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 188/564 (33%), Positives = 277/564 (49%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A+ +++ G AVITK P S+T AQGGV+A L D+
Sbjct: 36 FDAVVVGAGGAGLRAAMGLSEGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMNPDNWRW 95
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSH--- 196
H DT+ +L D + + + E I EL G F R DG ++ GG S+
Sbjct: 96 HFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGKIYQRAFGGQSNDFG 155
Query: 197 -----HRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L A + + + F +FA+DL+ +D C GV
Sbjct: 156 RGGQAHRTCCVADRTGHSLLHTLYGASLQY-DCNYFVEYFALDLI--MD--KGKCIGVVA 210
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L++ET ++ RF +K T+LA+GG G Y S T+ TGDG A+ RA S+MEFVQFH
Sbjct: 211 LDIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFH 270
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GG L N ERFM Y A +LA RDVV+
Sbjct: 271 PTGIYGVGC------------LITEGSRGEGGYLVNSQGERFMERYAPNAKDLASRDVVS 318
Query: 371 RSIDDQLKKR-----NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
R++ ++ + N+ ++ L + H P E++ P I+ + G+D+T +PIPV+P
Sbjct: 319 RAMTMEINEGRGVGPNKDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTKEPIPVIP 378
Query: 425 AAHYMCGGVRAGLQGETN----------VRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
HY GGV +G+ + GLY AGE A +HGANRL +NSLL+ ++F
Sbjct: 379 TVHYNMGGVPTNYKGQVLDFTPEGGDKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIF 438
Query: 475 ARRAVQPSI-DHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRR-----TKEVRKELQ 528
R + ++K SI N KS C+ ++ +L + E+R+++Q
Sbjct: 439 GRSCALTILNENKPGDSIPELPVN-----CEEKS--CDNLNGLLHSKGDISSIELRQKMQ 491
Query: 529 SIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY--LFEHG--WEQTFVGLEACEMRNLFC 584
M ++ + R L+ ++ + E + + G W V E E++NL
Sbjct: 492 MTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKACADSGKVWNSELV--ETLELQNLLI 549
Query: 585 CAKLVVSSALARHESRGLHYMVDF 608
A + +A R ESRG H DF
Sbjct: 550 NANQTIVAAENRTESRGAHARDDF 573
>TIGR_CMR|APH_0158 [details] [associations]
symbol:APH_0158 "succinate dehydrogenase, flavoprotein
subunit" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099 GO:GO:0022900
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 OMA:LMANAIT
KO:K00239 ProtClustDB:PRK09078 RefSeq:YP_504782.1
ProteinModelPortal:Q2GLG9 STRING:Q2GLG9 GeneID:3930091
KEGG:aph:APH_0158 PATRIC:20948884
BioCyc:APHA212042:GHPM-193-MONOMER Uniprot:Q2GLG9
Length = 604
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 181/563 (32%), Positives = 269/563 (47%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL + + G +VA +TK P S+T AQGG+SA L D
Sbjct: 16 YDVVVVGAGGAGLRAVVGMTAAGLSVACVTKVFPTRSHTVAAQGGISAALGNIAEDDWRW 75
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-- 197
HM DT+ +L D + + +C + EL G F R ++G ++ GG +
Sbjct: 76 HMFDTVKGSDWLGDQDAIEYMCKNAMQSVVELEHCGVPFSRTKEGKIYQRPFGGMTTEYG 135
Query: 198 ------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
R A+D TG I AL + + + F +FAIDL+ + D C GV
Sbjct: 136 KGKPAVRTCAASDKTGHAILHALYQQSLRF-DAKFFVEYFAIDLIMSEDNRS--CCGVLA 192
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
++ + RF + +LA+GG G +Y S T+ TGDG MA RA + +MEFVQFH
Sbjct: 193 WSLCDGVLHRFRAHAVVLATGGYGRVYFSATSAHTCTGDGGGMAARAGIPLEDMEFVQFH 252
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G L+TE RG+GG L N ERFM Y +A +LA RDVV+
Sbjct: 253 PTGIYGSGC------------LMTEGCRGEGGYLLNSAGERFMERYAPKAKDLASRDVVS 300
Query: 371 RSIDDQLKKRN---EK--YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK ++ L I+H + I P I+ + G+D+T +PIPV+P
Sbjct: 301 RSMTMEIREGRGVGEKKDHIYLSIAHLDPKVIHERLPGISETAKTFAGVDVTKEPIPVIP 360
Query: 425 AAHYMCGGVRAGLQGET---N--------VRGLYVAGEVACTGLHGANRLASNSLLEALV 473
HY GG+ GE N V GL+ GE AC +HGANRL SNSLL+ +V
Sbjct: 361 TVHYNMGGIPTNYHGEVLSLNSSSGSYEVVEGLFAIGEAACVSVHGANRLGSNSLLDLVV 420
Query: 474 FARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWR 533
F R A + + K + + +++ + N R E+R +Q++M
Sbjct: 421 FGRAAAIRAKEVIKPGGLHRPIRKDFEDSIIDRFDRMRYA-NGATRVAEIRSRMQNVMQE 479
Query: 534 YVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVV 590
+ + R L+ + I + A + + + W V EA E+ N+ A + V
Sbjct: 480 HAAVFRVAEVLEKGKKEIRGVAAMMKDISVTDRSMVWNSDLV--EALELSNMMPQAVVTV 537
Query: 591 SSALARHESRGLHYMVDFPHVEE 613
A R ESRG H DFP ++
Sbjct: 538 DCAANRKESRGAHAREDFPERDD 560
>TIGR_CMR|APH_0161 [details] [associations]
symbol:APH_0161 "succinate dehydrogenase, flavoprotein
subunit" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099 GO:GO:0022900
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 KO:K00239
ProtClustDB:PRK09078 RefSeq:YP_504785.1 ProteinModelPortal:Q2GLG6
STRING:Q2GLG6 GeneID:3930828 KEGG:aph:APH_0161 PATRIC:20948890
OMA:FIYLDLR BioCyc:APHA212042:GHPM-196-MONOMER Uniprot:Q2GLG6
Length = 604
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 181/563 (32%), Positives = 269/563 (47%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G AGL + + G +VA ITK P S+T AQGG++A L D
Sbjct: 16 YDVVVVGAGGAGLRVVIGMTAAGFSVACITKVFPTRSHTVAAQGGINAALGNVTEDDWRW 75
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-- 197
HM DT+ +L D + + +C + EL G F R ++G ++ GG +
Sbjct: 76 HMFDTVKGSDWLGDQDAIEYMCKNAIQSVIELEHYGVPFSRTKEGKIYQRPYGGMTTEYG 135
Query: 198 ------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
R A+D TG I AL + + + F +FAIDL+ + D C GV
Sbjct: 136 KGKPAVRTCAASDKTGHAILHALYQQSLRF-DAKFFVEYFAIDLIMSEDNRS--CCGVLA 192
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
++ + RF + +LA+GG G +Y S T+ TGDG MA RA + +MEFVQFH
Sbjct: 193 WSLCDGVLHRFRAHAVVLATGGYGRVYFSATSAHTCTGDGGGMAARAGIPLEDMEFVQFH 252
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G L+TE RG+GG L N ERFM Y +A +LA RDVV+
Sbjct: 253 PTGIYGSGC------------LMTEGCRGEGGYLLNSAGERFMERYAPKAKDLASRDVVS 300
Query: 371 RSIDDQLKKRN---EK--YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK ++ L I+H + I P I+ + G+D+T +PIPV+P
Sbjct: 301 RSMTMEIREGRGVGEKKDHIYLSIAHLDPKVIHERLPGISETAKTFAGVDVTKEPIPVIP 360
Query: 425 AAHYMCGGVRAGLQGET---N--------VRGLYVAGEVACTGLHGANRLASNSLLEALV 473
HY GG+ GE N V GL+ GE AC +HGANRL SNSLL+ +V
Sbjct: 361 TVHYNMGGIPTNYHGEVLSLNSSSGSYEVVEGLFAIGEAACVSVHGANRLGSNSLLDLVV 420
Query: 474 FARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWR 533
F R A + + K + + +++ + N R E+R +Q++M
Sbjct: 421 FGRAAAIRAKEVIKPGGLHRPIRKDFEDSIIDRFDRMRYA-NGATRVAEIRSRMQNVMQE 479
Query: 534 YVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVV 590
+ + R L+ + I + A + + + W V EA E+ N+ A + V
Sbjct: 480 HAAVFRVAEVLEKGKKEIRGVAAMMKDISVTDRSMVWNSDLV--EALELSNMMPQAVVTV 537
Query: 591 SSALARHESRGLHYMVDFPHVEE 613
A R ESRG H DFP ++
Sbjct: 538 DCAANRKESRGAHAREDFPERDD 560
>TIGR_CMR|BA_4662 [details] [associations]
symbol:BA_4662 "L-aspartate oxidase" species:198094
"Bacillus anthracis str. Ames" [GO:0006734 "NADH metabolic process"
evidence=ISS] [GO:0008734 "L-aspartate oxidase activity"
evidence=ISS] InterPro:IPR005288 InterPro:IPR013027
InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005737 GO:GO:0009435 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:1.20.58.100 SUPFAM:SSF46977 HOGENOM:HOG000160476 KO:K00278
GO:GO:0008734 GO:GO:0044318 TIGRFAMs:TIGR00551 HSSP:P10902
RefSeq:NP_846877.1 RefSeq:YP_021309.1 RefSeq:YP_030574.1
ProteinModelPortal:Q81LF9 IntAct:Q81LF9 DNASU:1083663
EnsemblBacteria:EBBACT00000008255 EnsemblBacteria:EBBACT00000014806
EnsemblBacteria:EBBACT00000023923 GeneID:1083663 GeneID:2818334
GeneID:2851956 KEGG:ban:BA_4662 KEGG:bar:GBAA_4662 KEGG:bat:BAS4327
OMA:MAGQAII ProtClustDB:PRK08071
BioCyc:BANT260799:GJAJ-4382-MONOMER
BioCyc:BANT261594:GJ7F-4531-MONOMER Uniprot:Q81LF9
Length = 509
Score = 514 (186.0 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 134/306 (43%), Positives = 182/306 (59%)
Query: 246 CHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNM 305
C GV T N E + + R+ + T+LASGG G +Y T+N TGDG+AM +RA + ++
Sbjct: 161 CVGVLTRNSEGK-LKRYDADYTVLASGGVGGLYAFTSNDKTITGDGLAMVYRAGGELVDL 219
Query: 306 EFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFM-PLYDERAELA 364
EFVQFHPT L G + L++EAVRG+G +L N +RFM ++D+ +LA
Sbjct: 220 EFVQFHPTMLYAGG---------QCCGLVSEAVRGEGAVLINGKGQRFMMDIHDDY-DLA 269
Query: 365 PRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVP 424
PRDVVAR+I +QL EK V L+I + FP ++A C K G+DIT + IPVVP
Sbjct: 270 PRDVVARAIHEQLLS-GEK-VYLNIGS--IQNFQERFPTVSALCKKNGVDITKKRIPVVP 325
Query: 425 AAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSID 484
AH+ GGV+ + GET++ LY GEVAC G+HGANRLASNSLLE LVF +R Q +
Sbjct: 326 GAHFHMGGVKTNIDGETSIPNLYAVGEVACNGVHGANRLASNSLLEGLVFGKRIGQHILT 385
Query: 485 HKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSL 544
K+T L+ K V++++ TKE E+Q M +YVGIVR+ SL
Sbjct: 386 --KATKDKLN-------DFAEKEKKFIVLNHL--PTKE---EIQECMMKYVGIVRTEQSL 431
Query: 545 QTAE-W 549
A+ W
Sbjct: 432 SYAKRW 437
Score = 493 (178.6 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 118/304 (38%), Positives = 174/304 (57%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQD 143
D +IGSG+A L A E+ V +ITK +NT+ AQGG++A + D+ H +D
Sbjct: 5 DVLIIGSGIAALRVAKEICHEKNVIIITKETNRNNNTHLAQGGIAAAVATYDNPNDHFED 64
Query: 144 TIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAA 203
T+VAG +++ VR + EGP ++ LI G FD E G HL +EG H RI+HA
Sbjct: 65 TLVAGCRYNNEDVVRYLVEEGPKEMKNLIENGMQFDGDETGP-HLGKEGAHRKRRILHAG 123
Query: 204 -DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRF 262
D TG+ + ++ VV P+++V E +D + + C GV T N E + + R+
Sbjct: 124 GDATGKNLLEHFIQEVV--PHVTVVEQEMVLDFIIESEK----CVGVLTRNSEGK-LKRY 176
Query: 263 ISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPI 322
+ T+LASGG G +Y T+N TGDG+AM +RA + ++EFVQFHPT L G
Sbjct: 177 DADYTVLASGGVGGLYAFTSNDKTITGDGLAMVYRAGGELVDLEFVQFHPTMLYAGG--- 233
Query: 323 KPKKTRENSFLITEAVRGDGGILYNLGMERFM-PLYDERAELAPRDVVARSIDDQLKKRN 381
+ L++EAVRG+G +L N +RFM ++D+ +LAPRDVVAR+I +QL
Sbjct: 234 ------QCCGLVSEAVRGEGAVLINGKGQRFMMDIHDDY-DLAPRDVVARAIHEQLLSGE 286
Query: 382 EKYV 385
+ Y+
Sbjct: 287 KVYL 290
Score = 109 (43.4 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 524 RKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLF 583
++E+Q M +YVGIVR+ SL A+ + + + +H + E + N+
Sbjct: 411 KEEIQECMMKYVGIVRTEQSLSYAKRWLSKYGVR--NMILQHD----ALTNEEITLINML 464
Query: 584 CCAKLVVSSALARHESRGLHYMVDFPH 610
+L+V SAL R ES G HY D+PH
Sbjct: 465 TVCELIVVSALQREESIGGHYRSDYPH 491
>UNIPROTKB|P00363 [details] [associations]
symbol:frdA species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0016627 "oxidoreductase activity, acting on the CH-CH group of
donors" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0001539
"ciliary or flagellar motility" evidence=IMP] [GO:0009296
"flagellum assembly" evidence=IMP] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0009061 "anaerobic respiration" evidence=IEA;IMP] [GO:0006113
"fermentation" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003952 InterPro:IPR005884 InterPro:IPR013027
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890 GO:GO:0005737
GO:GO:0016020 GO:GO:0009055 GO:GO:0050660 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR eggNOG:COG1053
GO:GO:0006974 GO:GO:0022900 GO:GO:0006113 GO:GO:0009061 EMBL:U14003
EMBL:J01611 GO:GO:0009296 GO:GO:0000104 GO:GO:0001539
DrugBank:DB00730 HOGENOM:HOG000160475 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01812 PIR:A00376
RefSeq:NP_418578.1 RefSeq:YP_492299.1 PDB:1KF6 PDB:1KFY PDB:1L0V
PDB:2B76 PDB:3CIR PDB:3P4P PDB:3P4Q PDB:3P4R PDB:3P4S PDBsum:1KF6
PDBsum:1KFY PDBsum:1L0V PDBsum:2B76 PDBsum:3CIR PDBsum:3P4P
PDBsum:3P4Q PDBsum:3P4R PDBsum:3P4S ProteinModelPortal:P00363
SMR:P00363 DIP:DIP-9681N IntAct:P00363 MINT:MINT-1310079
PRIDE:P00363 EnsemblBacteria:EBESCT00000002969
EnsemblBacteria:EBESCT00000016917 GeneID:12931889 GeneID:948667
KEGG:ecj:Y75_p4043 KEGG:eco:b4154 PATRIC:32123881 EchoBASE:EB0326
EcoGene:EG10330 KO:K00244 OMA:RKGNTIP ProtClustDB:PRK09231
BioCyc:EcoCyc:FUM-FLAVO BioCyc:ECOL316407:JW4115-MONOMER
BioCyc:MetaCyc:FUM-FLAVO SABIO-RK:P00363 ChEMBL:CHEMBL1819
EvolutionaryTrace:P00363 Genevestigator:P00363 TIGRFAMs:TIGR01176
Uniprot:P00363
Length = 602
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 173/548 (31%), Positives = 264/548 (48%)
Query: 84 DFSVIGSGVAGLCYALEVAK---HGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESH 140
D +++G+G AGL A+ A+ + +A+I+K P S+T A+GG +AV DS E H
Sbjct: 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYH 66
Query: 141 MQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIV 200
DT+ G +LC+ + V P + +L G + R DG++++ R GG R
Sbjct: 67 FHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTW 126
Query: 201 HAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVV 260
AAD TG + L + + P I F+ HF +D+L +D D G+ +N+ +V
Sbjct: 127 FAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL--VD--DGHVRGLVAMNMMEGTLV 182
Query: 261 RFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGL 320
+ + ++A+GGAG +Y TN + TGDGM MA + +MEFVQ+HPT L G+
Sbjct: 183 QIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGSGI 242
Query: 321 PIKPKKTRENSFLITEAVRGDGGILYNLGMERFM---------PLYDER---AELAPRDV 368
L+TE RG+GGIL N R++ PL + + EL PRD
Sbjct: 243 ------------LMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDK 290
Query: 369 VARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIP 421
V+++ + +K N V LD+ H +K+ P I Y G+D +PIP
Sbjct: 291 VSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIP 350
Query: 422 VVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQP 481
V P AHY GG+ ET ++GL+ GE + GLHGANRL SNSL E +VF R A +
Sbjct: 351 VRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQ 410
Query: 482 SIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRST 541
+ + + A+ V + L V + ++R E+ M GI R+
Sbjct: 411 ATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTP 470
Query: 542 TSLQTAEWRIDELEAEWETYLFEHGWEQTFVG--LEACEMRNLFCCAKLVVSSALARHES 599
+Q ++ EL+ ++ F L E+ + A+ + SA+AR ES
Sbjct: 471 ELMQKTIDKLAELQERFKRVRITDT-SSVFNTDLLYTIELGHGLNVAECMAHSAMARKES 529
Query: 600 RGLHYMVD 607
RG H +D
Sbjct: 530 RGAHQRLD 537
>UNIPROTKB|Q9KNS5 [details] [associations]
symbol:VC_2656 "Fumarate reductase, flavoprotein subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR003952 InterPro:IPR005884 InterPro:IPR013027
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0022900 GO:GO:0009061
GO:GO:0000104 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01812 KO:K00244 ProtClustDB:PRK09231
TIGRFAMs:TIGR01176 HSSP:P00363 PIR:F82050 RefSeq:NP_232284.1
ProteinModelPortal:Q9KNS5 SMR:Q9KNS5 DNASU:2615673 GeneID:2615673
KEGG:vch:VC2656 PATRIC:20084332 OMA:RFDEYFV Uniprot:Q9KNS5
Length = 602
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 174/551 (31%), Positives = 270/551 (49%)
Query: 84 DFSVIGSGVAGLCYALEVAK---HGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESH 140
D +VIG+G AGL A+ A+ H VA+I+K P S+T A+GG +AV+ DS+++H
Sbjct: 7 DIAVIGAGGAGLRTAIAAAEANPHLEVALISKVYPMRSHTVAAEGGSAAVIKDEDSLDNH 66
Query: 141 MQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIV 200
DT+ G +LC+ + V + ++ G + R E+G +++ R GG R
Sbjct: 67 FNDTVGGGDWLCEQDVVEYFVANATREMIQMEQWGCPWSRKENGEVNVRRFGGMKVERTW 126
Query: 201 HAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVV 260
AAD TG + L + + P I + +F +DLL +D + G+ +++ E+V
Sbjct: 127 FAADKTGFHMLHTLFQTSMKYPQIKRLDEYFVVDLL--VD--EGEIQGLIAIHMSEGELV 182
Query: 261 RFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGL 320
+K +LA+GGAG +Y TN + TGDGMAMA R + +MEFVQ+HPT L G+
Sbjct: 183 TIKAKSVVLATGGAGRVYHCNTNGGIVTGDGMAMAFRHGVPLRDMEFVQYHPTGLPGTGI 242
Query: 321 PIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY------------DERAELAPRDV 368
L+TE RG+GGI+ N R++ Y ++ EL PRD
Sbjct: 243 ------------LMTEGCRGEGGIIVNKHGYRYLQDYGMGPETPVGQPKNKYMELGPRDK 290
Query: 369 VARSIDDQLKKRNE-KYVL-----LDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIP 421
V+++ + +K N K+ L LD+ H E + P I Y +D +PIP
Sbjct: 291 VSQAFWHEQQKGNTIKHPLGDVVHLDLRHLGEEYLQERLPFICELAKAYVNVDPAKEPIP 350
Query: 422 VVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFAR----R 477
+ P HY GG+ + ET ++GL+ GE A GLHGANRL SNSL E +VF R +
Sbjct: 351 IRPTVHYTMGGIETNGECETRIKGLFAVGECASVGLHGANRLGSNSLAEFVVFGRVAGEK 410
Query: 478 AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGI 537
AV+ + + K ++A + V + + + +R E+ M GI
Sbjct: 411 AVERAAEFKGWNEKAIAAQ---VKAVEDR-IAALMQQEGDENWATIRTEMGHTMEAGCGI 466
Query: 538 VRSTTSLQTAEWRIDELEAEWETY-LFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALAR 596
R +Q ++ EL+ ++ + + G L A E+ A+ +V SA+ R
Sbjct: 467 YRQEDLMQETIDKLAELKERYKRISIKDKGKVFNTDLLYAIEVGYGLDVAEAMVHSAILR 526
Query: 597 HESRGLHYMVD 607
ESRG H +D
Sbjct: 527 KESRGAHQRLD 537
>TIGR_CMR|VC_2656 [details] [associations]
symbol:VC_2656 "fumarate reductase, flavoprotein subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR003952
InterPro:IPR005884 InterPro:IPR013027 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0022900 GO:GO:0009061 GO:GO:0000104
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01812 KO:K00244 ProtClustDB:PRK09231
TIGRFAMs:TIGR01176 HSSP:P00363 PIR:F82050 RefSeq:NP_232284.1
ProteinModelPortal:Q9KNS5 SMR:Q9KNS5 DNASU:2615673 GeneID:2615673
KEGG:vch:VC2656 PATRIC:20084332 OMA:RFDEYFV Uniprot:Q9KNS5
Length = 602
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 174/551 (31%), Positives = 270/551 (49%)
Query: 84 DFSVIGSGVAGLCYALEVAK---HGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESH 140
D +VIG+G AGL A+ A+ H VA+I+K P S+T A+GG +AV+ DS+++H
Sbjct: 7 DIAVIGAGGAGLRTAIAAAEANPHLEVALISKVYPMRSHTVAAEGGSAAVIKDEDSLDNH 66
Query: 141 MQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIV 200
DT+ G +LC+ + V + ++ G + R E+G +++ R GG R
Sbjct: 67 FNDTVGGGDWLCEQDVVEYFVANATREMIQMEQWGCPWSRKENGEVNVRRFGGMKVERTW 126
Query: 201 HAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVV 260
AAD TG + L + + P I + +F +DLL +D + G+ +++ E+V
Sbjct: 127 FAADKTGFHMLHTLFQTSMKYPQIKRLDEYFVVDLL--VD--EGEIQGLIAIHMSEGELV 182
Query: 261 RFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGL 320
+K +LA+GGAG +Y TN + TGDGMAMA R + +MEFVQ+HPT L G+
Sbjct: 183 TIKAKSVVLATGGAGRVYHCNTNGGIVTGDGMAMAFRHGVPLRDMEFVQYHPTGLPGTGI 242
Query: 321 PIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY------------DERAELAPRDV 368
L+TE RG+GGI+ N R++ Y ++ EL PRD
Sbjct: 243 ------------LMTEGCRGEGGIIVNKHGYRYLQDYGMGPETPVGQPKNKYMELGPRDK 290
Query: 369 VARSIDDQLKKRNE-KYVL-----LDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIP 421
V+++ + +K N K+ L LD+ H E + P I Y +D +PIP
Sbjct: 291 VSQAFWHEQQKGNTIKHPLGDVVHLDLRHLGEEYLQERLPFICELAKAYVNVDPAKEPIP 350
Query: 422 VVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFAR----R 477
+ P HY GG+ + ET ++GL+ GE A GLHGANRL SNSL E +VF R +
Sbjct: 351 IRPTVHYTMGGIETNGECETRIKGLFAVGECASVGLHGANRLGSNSLAEFVVFGRVAGEK 410
Query: 478 AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGI 537
AV+ + + K ++A + V + + + +R E+ M GI
Sbjct: 411 AVERAAEFKGWNEKAIAAQ---VKAVEDR-IAALMQQEGDENWATIRTEMGHTMEAGCGI 466
Query: 538 VRSTTSLQTAEWRIDELEAEWETY-LFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALAR 596
R +Q ++ EL+ ++ + + G L A E+ A+ +V SA+ R
Sbjct: 467 YRQEDLMQETIDKLAELKERYKRISIKDKGKVFNTDLLYAIEVGYGLDVAEAMVHSAILR 526
Query: 597 HESRGLHYMVD 607
ESRG H +D
Sbjct: 527 KESRGAHQRLD 537
>UNIPROTKB|G5E6M7 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 GO:GO:0006099 GO:GO:0022900
GO:GO:0016627 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812
GeneTree:ENSGT00390000010046 EMBL:DAAA02051474
Ensembl:ENSBTAT00000064981 Uniprot:G5E6M7
Length = 664
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 196/609 (32%), Positives = 283/609 (46%)
Query: 38 CIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKY-FDFSVIGSGVAGLC 96
C + +W + F+F+ V N +S V + V + FD V+G+G AGL
Sbjct: 20 CTKWPAAWQTGTRSFHFT---VDGNKRSSAKVSDAISAQYPVVDHEFDAVVVGAGGAGLR 76
Query: 97 YALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVESHMQDTIVAGAYLCD 153
A +++ G A +TK P S+T AQGG++A L D+ H DT+ +L D
Sbjct: 77 AAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGD 136
Query: 154 DETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS--------HHRIVHAADM 205
+ + + + P + EL G F R EDG ++ GG S HR AD
Sbjct: 137 QDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADR 196
Query: 206 TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISK 265
TG + L + + S F +FA+DLL ++ + C GV L +E +
Sbjct: 197 TGHSLLHTLYGRSLRY-DTSYFVEYFALDLL--MESGE--CRGVIALCIERVHPPHQ-GQ 250
Query: 266 VTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPK 325
G G Y S T+ +TGDG AM RA ++EFVQFHPT + G
Sbjct: 251 EHCHRHRGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC----- 305
Query: 326 KTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVARSIDDQLKKRN--- 381
LITE RG+GGIL N ERFM Y A +LA RDVV+RS+ ++++
Sbjct: 306 -------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG 358
Query: 382 -EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQ 438
EK +V L + H P ++ P I+ + + G+D+T +PIPV+P HY GG+ +
Sbjct: 359 PEKDHVYLQLHHLPPAQLAMRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 418
Query: 439 GET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSIDHKKS 488
G+ N V GLY GE AC +HGANRL +NSLL+ +VF R A+ + +
Sbjct: 419 GQVLRHVNGQDQVVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPG 478
Query: 489 TSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAE 548
+ N +V+ +L N RT E+R +Q M + + R + LQ
Sbjct: 479 DKVPSIKPNAGEESVM--NLDKLRFANGSIRTSELRLNMQKSMQSHAAVFRVGSVLQEGC 536
Query: 549 WRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYM 605
+I L + F+ G W V E E++NL CA + A AR ESRG H
Sbjct: 537 EKISSLYGDLRHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIYGAEARKESRGAHAR 594
Query: 606 VDFPH-VEE 613
DF V+E
Sbjct: 595 EDFKERVDE 603
>TIGR_CMR|NSE_0376 [details] [associations]
symbol:NSE_0376 "succinate dehydrogenase, flavoprotein
subunit" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0045282 "plasma
membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 eggNOG:COG1053 GO:GO:0006099
GO:GO:0022900 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 KO:K00239
ProtClustDB:PRK09078 RefSeq:YP_506265.1 ProteinModelPortal:Q2GE31
SMR:Q2GE31 STRING:Q2GE31 GeneID:3931671 KEGG:nse:NSE_0376
PATRIC:22680823 BioCyc:NSEN222891:GHFU-401-MONOMER Uniprot:Q2GE31
Length = 597
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 181/565 (32%), Positives = 265/565 (46%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
+D V+G+G +GL L +A G VA ++K P S+T AQGG+SA L D
Sbjct: 13 YDVVVVGAGGSGLRATLGMASQGLKVACLSKVFPTRSHTVAAQGGISAALGNISEDDWRW 72
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-- 197
H DT+ +L D + + +C + EL G F R +G ++ GG + H
Sbjct: 73 HAYDTVKGSDWLGDQDAIEYMCKNASSSVIELENFGVPFSRTSEGKIYQRPFGGMTTHYG 132
Query: 198 -----RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTL 252
R A D TG I AL + + + F + +DLL +D D C GV
Sbjct: 133 KGRAIRTCAAEDKTGHAILHALYQQSIK-LDTEFFVEYIVLDLL--MD--DEGCKGVIAW 187
Query: 253 NVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHP 312
+++ + RF + + ++A+GG G IY S T TGDG A RA + +MEFVQFHP
Sbjct: 188 DLKDGSLHRFRAHIVVIATGGYGRIYFSATGAHTCTGDGNAFVLRAGLPLQDMEFVQFHP 247
Query: 313 TALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVAR 371
T + G LI+EAVRG+GG L N ERFM Y A +LA RDVV+R
Sbjct: 248 TGIYGAGC------------LISEAVRGEGGYLINSEGERFMAKYAPSAIDLASRDVVSR 295
Query: 372 SIDDQLKKRN-----EKYVLLDISHKPTEKILSHFPNIAAECLKYG-LDITSQPIPVVPA 425
+I +++ + ++ L +SH ++ I P I+ + +D+T +PIPV+P
Sbjct: 296 AITMEIRAGRGVGPKKDHIYLQVSHLGSKVIEQRLPGISETARIFANVDVTKEPIPVLPT 355
Query: 426 AHYMCGGVRAGLQGET------NVR----GLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ A GE NV GL GE AC +HGANRL SNSLL+ +VF
Sbjct: 356 VHYNMGGIPANYHGEVLTVDDENVEKVVPGLMAIGEAACISVHGANRLGSNSLLDLVVFG 415
Query: 476 RRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYV 535
R A + + K+ + T V+ + L T +R+++Q IM +
Sbjct: 416 RTAAIRAREVIKANTKHSPIDKELTERVLARFDRFRYADGGLP-TAVLRRKMQLIMQEHA 474
Query: 536 GIVRSTTSLQTAEWRIDELEAEW-ETYLFEHG--WEQTFVGLEACEMRNLFCCAKLVVSS 592
+ R+ L ++ E E E + + W V E E+ N+ A + S
Sbjct: 475 AVFRTQEVLDEGCKKMREFLREMDEINVTDRSLVWNTDLV--ETLELDNMVSQAVATIES 532
Query: 593 ALARHESRGLHYMVDFPHVEENKRL 617
A R ESRG H D+P ++ L
Sbjct: 533 AANRKESRGSHAREDYPERDDENWL 557
>UNIPROTKB|E9PBJ5 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 InterPro:IPR003953 Pfam:PF00890 GO:GO:0050660
GO:GO:0006099 GO:GO:0022900 GO:GO:0016627 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 HGNC:HGNC:10680 EMBL:AC021087 IPI:IPI00964764
ProteinModelPortal:E9PBJ5 SMR:E9PBJ5 Ensembl:ENST00000510361
UCSC:uc011clw.2 ArrayExpress:E9PBJ5 Bgee:E9PBJ5 Uniprot:E9PBJ5
Length = 616
Score = 526 (190.2 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 160/463 (34%), Positives = 227/463 (49%)
Query: 175 GASFDRGEDGNLHLAREGGHS--------HHRIVHAADMTGREIERALLEAVVSDPNISV 226
G F R EDG ++ GG S HR AD TG + L + + S
Sbjct: 109 GMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSY 167
Query: 227 FEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLV 286
F +FA+DLL + C GV L +E + R +K T++A+GG G Y S T+
Sbjct: 168 FVEYFALDLLME----NGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHT 223
Query: 287 ATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILY 346
+TGDG AM RA ++EFVQFHPT + G LITE RG+GGIL
Sbjct: 224 STGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGILI 271
Query: 347 NLGMERFMPLYDERA-ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPTEKILSH 400
N ERFM Y A +LA RDVV+RS+ ++++ EK +V L + H P E++ +
Sbjct: 272 NSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATR 331
Query: 401 FPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGET----N-----VRGLYVAG 450
P I+ + + G+D+T +PIPV+P HY GG+ +G+ N V GLY G
Sbjct: 332 LPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACG 391
Query: 451 EVACTGLHGANRLASNSLLEALVFARRAVQPSIDH--KKSTSIDLSASNWWTRTVVPKSL 508
E AC +HGANRL +NSLL+ +VF R A SI+ + + N +V+ +L
Sbjct: 392 EAACASVHGANRLGANSLLDLVVFGR-ACALSIEESCRPGDKVPPIKPNAGEESVM--NL 448
Query: 509 GCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG- 566
+ RT E+R +Q M + + R + LQ +I +L + + F+ G
Sbjct: 449 DKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGM 508
Query: 567 -WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 608
W V E E++NL CA + A AR ESRG H D+
Sbjct: 509 VWNTDLV--ETLELQNLMLCALQTIYGAEARKESRGAHAREDY 549
Score = 65 (27.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQ 124
FD V+G+G AGL A +++ G A +TK P S+T AQ
Sbjct: 62 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQ 104
>UNIPROTKB|D6RFM5 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 GO:GO:0006099 GO:GO:0022900
GO:GO:0016627 HOGENOM:HOG000160475 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812
HGNC:HGNC:10680 EMBL:AC021087 IPI:IPI00965327
ProteinModelPortal:D6RFM5 SMR:D6RFM5 Ensembl:ENST00000504309
UCSC:uc021xvu.1 ArrayExpress:D6RFM5 Bgee:D6RFM5 Uniprot:D6RFM5
Length = 583
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 155/421 (36%), Positives = 218/421 (51%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 62 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 121
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R EDG ++ GG S
Sbjct: 122 HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFG 181
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL + C GV
Sbjct: 182 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIA 236
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFH
Sbjct: 237 LCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFH 296
Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVA 370
PT + G LITE RG+GGIL N ERFM Y A +LA RDVV+
Sbjct: 297 PTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS 344
Query: 371 RSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVP 424
RS+ ++++ EK +V L + H P E++ + P I+ + + G+D+T +PIPV+P
Sbjct: 345 RSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLP 404
Query: 425 AAHYMCGGVRAGLQGET----N-----VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
HY GG+ +G+ N V GLY GE AC +HGANRL +NSLL+ +VF
Sbjct: 405 TVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFG 464
Query: 476 R 476
R
Sbjct: 465 R 465
>UNIPROTKB|O53670 [details] [associations]
symbol:Rv0248c "Succinate dehydrogenase flavoprotein
subunit" species:83332 "Mycobacterium tuberculosis H37Rv"
[GO:0005618 "cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR013027 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005886 GO:GO:0005618 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0050660 HSSP:P83223 EMBL:BX842572
GO:GO:0022900 GO:GO:0000104 GO:GO:0016627 HOGENOM:HOG000160475
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 KO:K00239
EMBL:CP003248 PIR:D70939 RefSeq:NP_214762.1 RefSeq:NP_334666.1
RefSeq:YP_006513572.1 SMR:O53670 EnsemblBacteria:EBMYCT00000001595
EnsemblBacteria:EBMYCT00000070032 GeneID:13316235 GeneID:886675
GeneID:923170 KEGG:mtc:MT0262 KEGG:mtu:Rv0248c KEGG:mtv:RVBD_0248c
PATRIC:18122289 TubercuList:Rv0248c OMA:KSGCTVM
ProtClustDB:PRK07803 Uniprot:O53670
Length = 646
Score = 374 (136.7 bits), Expect = 5.2e-55, Sum P(2) = 5.2e-55
Identities = 101/284 (35%), Positives = 148/284 (52%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVLC---PSDSVE 138
+D VIG+G AGL +E + G VAV+ K+ +++T A+GG +A + P D+ +
Sbjct: 9 YDVVVIGAGGAGLRAVIEARERGLKVAVVCKSLFGKAHTVMAEGGCAAAMGNANPKDNWK 68
Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHR 198
+H DT+ G +L + + E PDR+ EL GA FDR +DG + GGH++ R
Sbjct: 69 THFGDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTDDGRISQRNFGGHTYPR 128
Query: 199 IVHAADMTGREIERALLEAVVS---DPNISVFEHH-----FAIDLLTTLDGPDAVCHGVD 250
+ H D TG E+ R L + VVS + + + ++ FA +T L G
Sbjct: 129 LAHVGDRTGLELIRTLQQKVVSLQQEDHAELGDYEARIKVFAECTITELLKDQGAIAGAF 188
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQF 310
E+ + F + +LA+GG G + T+N TGDG A+A RA A + NMEFVQF
Sbjct: 189 GYWRESGRFIVFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINMEFVQF 248
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFM 354
HPT + + P + L+TE VRGDGG+L N RFM
Sbjct: 249 HPTGM------VWPPSVK--GILVTEGVRGDGGVLKNSENSRFM 284
Score = 263 (97.6 bits), Expect = 5.2e-55, Sum P(2) = 5.2e-55
Identities = 90/271 (33%), Positives = 136/271 (50%)
Query: 362 ELAPRDVVARSIDDQLKK-RNEKY--VLLDISHKPTE-KILSHFPNIAAECLKYG-LDIT 416
+L PRD VAR+I+ ++K R + V LDI+ + T +I P++ + + +DIT
Sbjct: 318 DLLPRDEVARAINSEVKAGRGTPHGGVYLDIASRLTPAEIKRRLPSMYHQFKELAEVDIT 377
Query: 417 SQPIPVVPAAHYMCGGVRAGLQ-GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
+Q + V P HY+ GGV G V GL+ AGE A G+HG+NRL NSL + LVF
Sbjct: 378 TQAMEVGPTCHYVMGGVEVDADTGAATVPGLFAAGECA-GGMHGSNRLGGNSLSDLLVFG 436
Query: 476 RRAVQPSIDHKKSTS---------IDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKE 526
RRA + D+ ++ S ID +A + PK G + N + +
Sbjct: 437 RRAGLGAADYVRALSSRPAVSAEAIDAAAQQALSPFEGPKD-G-SAPEN----PYALHMD 490
Query: 527 LQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLE-ACEMRNLFCC 585
LQ +M VGI+R+ + A + EL + + L E G Q G + ++RN+
Sbjct: 491 LQYVMNDLVGIIRNADEISRALTLLAELWSRYHNVLVE-GHRQYNPGWNLSIDLRNMLLV 549
Query: 586 AKLVVSSALARHESRGLHYMVDFPHVEENKR 616
++ V +AL R ESRG H D P ++ N R
Sbjct: 550 SECVARAALQRTESRGGHTRDDHPGMDPNWR 580
>FB|FBgn0036222 [details] [associations]
symbol:CG5718 species:7227 "Drosophila melanogaster"
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
InterPro:IPR003952 InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 EMBL:AE014296 GO:GO:0050660 eggNOG:COG1053
GO:GO:0006099 GO:GO:0022900 KO:K00234 GO:GO:0008177
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 TIGRFAMs:TIGR01812 GeneTree:ENSGT00700000105263
HSSP:P10444 EMBL:AY094732 RefSeq:NP_648523.1 UniGene:Dm.12012
UniGene:Dm.36868 SMR:Q8SX97 STRING:Q8SX97
EnsemblMetazoa:FBtr0076069 GeneID:39348 KEGG:dme:Dmel_CG5718
UCSC:CG5718-RA FlyBase:FBgn0036222 InParanoid:Q8SX97 OMA:RTMTKHA
OrthoDB:EOG4QJQ39 GenomeRNAi:39348 NextBio:813213 Uniprot:Q8SX97
Length = 651
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 181/587 (30%), Positives = 272/587 (46%)
Query: 72 LSCLRDGSVK--Y------FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNY 122
+SC+RD S K Y FD VIG+G AG+ +A+ G A+I+K P S+T
Sbjct: 28 VSCVRDASCKDEYSLIDHKFDAIVIGAGGAGMRAGFGLAEKGFQTAIISKLFPTRSHTVA 87
Query: 123 AQGGVSAVLC--PSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDR 180
AQGGV+A L D + H DT+ +L D + +C E + EL G F R
Sbjct: 88 AQGGVNAALSNMDKDDWKYHFYDTVKGSDWLGDQNAIHYMCREAERAVCELDMYGMPFSR 147
Query: 181 GEDGNLHLAREGGHS--------HHRIVHAADMTGREIERALL-EAVVSDPNISVFEHHF 231
DG ++ GG + R AD TG + L + + + F +F
Sbjct: 148 KPDGKIYQRPFGGQTLDYGKGGVARRACACADRTGHALIHTLYGQTLKHSDSCHYFVDYF 207
Query: 232 AIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDG 291
+DL+ + C G ++ RF++K T++A+GG G +Y STT TGDG
Sbjct: 208 VLDLIMS----QGACVGCLAWKLDDGTFHRFLAKNTVVAAGGCGRVYFSTTAGHTCTGDG 263
Query: 292 MAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGME 351
A R + + +MEFVQFHPT + G LITE VRG+GG N E
Sbjct: 264 NAWVSRQELPLMDMEFVQFHPTGIYGAGC------------LITEGVRGEGGFFLNCKGE 311
Query: 352 RFMPLYDERA-ELAPRDVVARSIDDQLKKRN-----EKYVLLDISHKPTEKILSHFPNIA 405
RFM Y +A +LA RDVVAR++ ++ N + +V L + H + I P I
Sbjct: 312 RFMERYAPKAKDLASRDVVARAMTMEVLAGNGCGPLKDHVHLQLHHIDAKIIKQRLPGIM 371
Query: 406 AECLKYG-LDITSQPIPVVPAAHYMCGGVRAGLQG----------ETNVRGLYVAGEVAC 454
+ +D+T +P+PV+P HY GG+ +G E V+GLY GE +C
Sbjct: 372 VTARIFAKVDVTKEPVPVLPTVHYNMGGIPTDYKGRVVTIDENGKEQVVKGLYSCGETSC 431
Query: 455 TGLHGANRLASNSLLEALVFARR-AVQPSIDH---KKSTSIDLSASNWWTRTVVPKSLGC 510
+HGANRL +NSLL+ ++F R A+ + ++ K ++ A+ K L C
Sbjct: 432 ASVHGANRLGANSLLDLIIFGRVCALDIAANNCPGDKPPQVEDKATEKSLDNF--KRLRC 489
Query: 511 NVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---W 567
+ T +R ELQ M ++ + R L+ ++ EL +++ W
Sbjct: 490 --ADGCIP-TAVLRMELQRTMTKHAAVFREGKLLKEGLLKVAELCEQFKDIKTTDRTMVW 546
Query: 568 EQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP-HVEE 613
V E E++N+ A ++++ R ESRG H DF V+E
Sbjct: 547 NSNLV--ETLELQNMLANAVHIITAMENRKESRGSHAREDFKTRVDE 591
>ZFIN|ZDB-GENE-040426-874 [details] [associations]
symbol:sdha "succinate dehydrogenase complex,
subunit A, flavoprotein (Fp)" species:7955 "Danio rerio"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=IEA]
[GO:0022904 "respiratory electron transport chain" evidence=ISS]
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003952
InterPro:IPR011281 InterPro:IPR014006 InterPro:IPR015939
Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890
ZFIN:ZDB-GENE-040426-874 GO:GO:0050660 GO:GO:0006099 GO:GO:0022900
GO:GO:0016627 HOGENOM:HOG000160475 Gene3D:1.20.58.100
PANTHER:PTHR11632:SF5 SUPFAM:SSF46977 TIGRFAMs:TIGR01816
TIGRFAMs:TIGR01812 HOVERGEN:HBG001461 HSSP:P00363 EMBL:AY391458
IPI:IPI00772422 UniGene:Dr.105233 ProteinModelPortal:Q6TNQ9
STRING:Q6TNQ9 PRIDE:Q6TNQ9 InParanoid:Q6TNQ9 ArrayExpress:Q6TNQ9
Bgee:Q6TNQ9 Uniprot:Q6TNQ9
Length = 663
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 181/565 (32%), Positives = 263/565 (46%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D
Sbjct: 59 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDDWRW 118
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + + P + EL G F R +DG ++ GG S
Sbjct: 119 HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRAFGGQSLKFG 178
Query: 196 ----HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
HR AD TG + L + + S F +FA+DLL ++ H
Sbjct: 179 KGGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLMEMESVRESLHSAWR 237
Query: 252 LNVETQEVVRFISKVTLLASGG--AGHIYPSTTNPLVATGDGMAMAHRA-QAVISNMEFV 308
+ T R S L GG A H + S T+ +TGDG AM RA ++EFV
Sbjct: 238 TDQSTVSERRTQS----LPLGGLWAAHSF-SCTSAHTSTGDGNAMVTRAWDCPRQDLEFV 292
Query: 309 QFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRD 367
QFHPT + G LITE RG+GGIL N ERFM Y A +LA RD
Sbjct: 293 QFHPTGIYGAGC------------LITEGCRGEGGILINSEGERFMERYAPNAKDLASRD 340
Query: 368 VVARSIDDQLKKR-----NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIP 421
VV+RS+ ++++ ++ +V L + H P +++ + P I+ + + G+D+T +PIP
Sbjct: 341 VVSRSMTIEIREGRGVGPDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEPIP 400
Query: 422 VVPAAHYMCGGVRAGLQGETN---------VRGLYVAGEVACTGLHGANRLASNSLLEAL 472
V+P HY GG+ +G+ V GLY GE C +HGANRL +NSLL+ +
Sbjct: 401 VLPTVHYNMGGIPTNYKGQVITYKDGQDHVVPGLYACGEAGCASVHGANRLGANSLLDLV 460
Query: 473 VFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMW 532
VF R A +I + LS +L N RT E+R +Q M
Sbjct: 461 VFGR-ACALTIAEIDTPGEKLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQ 519
Query: 533 RYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLV 589
+ + R+ L+ +++ + + F+ G W V E E++NL A
Sbjct: 520 SHAAVFRTGDVLKEGCVKMESVYKSMDDIKTFDRGIVWNTDLV--ETLELQNLMLNAVQT 577
Query: 590 VSSALARHESRGLHYMVDFP-HVEE 613
+ SA AR ESRG H DF V+E
Sbjct: 578 IVSAEARKESRGAHAREDFKDRVDE 602
>TIGR_CMR|BA_4754 [details] [associations]
symbol:BA_4754 "succinate dehydrogenase, flavoprotein
subunit" species:198094 "Bacillus anthracis str. Ames" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR003952
InterPro:IPR013027 InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368
PROSITE:PS00504 InterPro:IPR003953 Pfam:PF00890 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR HSSP:P83223
GO:GO:0000104 Gene3D:1.20.58.100 SUPFAM:SSF46977 KO:K00239
HOGENOM:HOG000160477 InterPro:IPR011280 PANTHER:PTHR11632:SF4
TIGRFAMs:TIGR01811 RefSeq:NP_846960.1 RefSeq:YP_021402.1
RefSeq:YP_030660.1 ProteinModelPortal:Q81L77 IntAct:Q81L77
DNASU:1086416 EnsemblBacteria:EBBACT00000011027
EnsemblBacteria:EBBACT00000018639 EnsemblBacteria:EBBACT00000019747
GeneID:1086416 GeneID:2815739 GeneID:2851654 KEGG:ban:BA_4754
KEGG:bar:GBAA_4754 KEGG:bat:BAS4413 OMA:AQDLRSM
ProtClustDB:PRK08641 BioCyc:BANT260799:GJAJ-4470-MONOMER
BioCyc:BANT261594:GJ7F-4618-MONOMER Uniprot:Q81L77
Length = 597
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 164/557 (29%), Positives = 261/557 (46%)
Query: 87 VIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVLCPS---DSVESHMQ 142
V+G G+AGL ++ A+ G V + + S++ AQGG++ + DS H
Sbjct: 7 VVGGGLAGLMATIKAAEAGVNVELFSLVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFD 66
Query: 143 DTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHA 202
DTI G +L + V+ +C P I + +G F+R E+G L R GG HHR A
Sbjct: 67 DTIYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFNRTEEGLLDFRRFGGTQHHRTAFA 126
Query: 203 ADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRF 262
TG+++ AL E V + + D L + + VC G+ +++T E+ F
Sbjct: 127 GATTGQQLLYALDEQVRRHEVAGLVTKYEGWDFLRAVVDDEGVCRGIVAQDLQTMEIKSF 186
Query: 263 ISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPI 322
+ ++A+GG G I+ +TN ++ TG + ++ A +N EF+Q HPTA+ +
Sbjct: 187 GADAVIMATGGPGIIFGKSTNSIINTGTAASAVYQQGAYYANGEFIQIHPTAIPGDD--- 243
Query: 323 KPKKTRENSFLITEAVRGDGGIL--YNLGMERFM--PLYDERAELAPRDVVARSIDD--- 375
K R L++E+ RG+GG + Y G + Y L PRD+ R I D
Sbjct: 244 ---KLR----LMSESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCV 296
Query: 376 --QLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGG 432
+L E V LD+SHK +++ I K+ G D P+ + PA HY GG
Sbjct: 297 EQKLGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFTGDDPRKLPMKIFPAVHYSMGG 356
Query: 433 VRAGLQGETNVRGLYVAGEVACT-GLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSI 491
+ + TN+ GL+ AGE C +HG NRL +NSLL A+ A +I++ K S
Sbjct: 357 LWVDYKQMTNIPGLFAAGE--CDYSMHGGNRLGANSLLSAIYGGMVAGPNAIEYMKGLS- 413
Query: 492 DLSASNWWTRTVVPKS--LGCNVMHNIL-----RRTKEVRKELQSIMWRYVGIVRSTTSL 544
+S+ + TV ++ + +NIL + KEL M V +VR L
Sbjct: 414 --KSSDAVSSTVYEQNELIETEKFNNILTLDGNENAYVLHKELGEWMTDNVTVVRENKKL 471
Query: 545 QTAEWRIDELEAEWETYLFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGL 602
+ +I+EL A ++ W ++ N+F A+++ A R+ESRG
Sbjct: 472 LETDAKIEELMARYKRININDTARWSNQGASFTR-QLANMFELARVITIGAYNRNESRGA 530
Query: 603 HYMVDFPHVEENKRLPT 619
HY +FP+ ++ L T
Sbjct: 531 HYKPEFPNRDDANFLKT 547
>TIGR_CMR|CJE_0458 [details] [associations]
symbol:CJE_0458 "fumarate reductase, flavoprotein subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] [GO:0045284 "plasma membrane fumarate
reductase complex" evidence=ISS] InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 InterPro:IPR003953 Pfam:PF00890
GO:GO:0050660 eggNOG:COG1053 GO:GO:0022900 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0000104 HOGENOM:HOG000160475
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01812 KO:K00244 RefSeq:YP_178477.1
ProteinModelPortal:Q5HW58 SMR:Q5HW58 STRING:Q5HW58 GeneID:3231220
KEGG:cjr:CJE0458 PATRIC:20042616 OMA:TNAVVCE ProtClustDB:PRK08626
BioCyc:CJEJ195099:GJC0-463-MONOMER Uniprot:Q5HW58
Length = 663
Score = 445 (161.7 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 158/520 (30%), Positives = 240/520 (46%)
Query: 135 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDG---------- 184
D+ + H DT+ + CD E R+ P +REL A G + R G
Sbjct: 64 DNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAAWGVPWTRVTKGPRTVVINAQK 123
Query: 185 ----------NLHLARE-GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAI 233
L AR+ GG R + AD TG + + + + + + A+
Sbjct: 124 TVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCMLYGVANEAIKH-QVKIIDRMEAV 182
Query: 234 DLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMA 293
++ DG C GV ++ +++ +I++ T++A+GG G IY TTN ++ G G A
Sbjct: 183 RIIH--DGKK--CLGVIARDLTNGQLIAYIARGTMIATGGYGRIYKQTTNAVICEGTGAA 238
Query: 294 MA-HRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMER 352
+A +SNME VQFHPT PI P + L+TE RGDGGIL ++ R
Sbjct: 239 IALETGLCRLSNMEAVQFHPT-------PIVP-----SGILLTEGCRGDGGILRDVDGYR 286
Query: 353 FMPLYD-ERAELAPRDVVARSIDDQLKK-RNEK-----YVLLDISHKPTEKILSHFPNIA 405
FMP Y+ E+ ELA RDVV+R + + ++K + K ++ LDIS + + ++
Sbjct: 287 FMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILGRAHVEKNLRDVQ 346
Query: 406 AECLKY-GLDITSQ-P---IPVVPAAHYMCGGVRAGLQGETN-VRGLYVAGEVACTGLHG 459
C + G+D + P PV+P HY GG+R GE+ + GL+ GE AC +HG
Sbjct: 347 DICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNGLFACGEAACWDMHG 406
Query: 460 ANRLASNSLLEALVFARRAVQPSIDHKKSTS--IDLSA-SNWWTRTV-VPKSL-GCNVMH 514
NRL NS E +V D+ K+ ID + ++ T+ KSL +
Sbjct: 407 FNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLTKEYQYLKSLVDKEGKY 466
Query: 515 NILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY--LFEHGWEQTFV 572
N+ E++ ++ IMW V I R+ L+ A +DELE ++ + H E
Sbjct: 467 NVF----EIKNRMKEIMWDKVAIFRTGEGLKEA---VDELEKLYKDSQDVKVHCKELDCA 519
Query: 573 GLE---ACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 609
E A + + A V AL R ESRG HY D+P
Sbjct: 520 NPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYP 559
Score = 148 (57.2 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 38/112 (33%), Positives = 57/112 (50%)
Query: 79 SVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLC----- 132
+++Y D VIG G+AGL A+EVAK G +V +++ S++ QGG+ A L
Sbjct: 2 NIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHSAAVQGGMQASLANGAKG 61
Query: 133 PSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDG 184
D+ + H DT+ + CD E R+ P +REL A G + R G
Sbjct: 62 EGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAAWGVPWTRVTKG 113
>UNIPROTKB|P65499 [details] [associations]
symbol:nadB "L-aspartate oxidase" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR005288 InterPro:IPR013027 InterPro:IPR015939
Pfam:PF02910 PRINTS:PR00368 UniPathway:UPA00253 InterPro:IPR003953
Pfam:PF00890 GO:GO:0005737 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0009435
EMBL:BX842577 Gene3D:1.20.58.100 SUPFAM:SSF46977 eggNOG:COG0029
HOGENOM:HOG000160476 KO:K00278 GO:GO:0008734 GO:GO:0044318
TIGRFAMs:TIGR00551 PIR:E70543 RefSeq:NP_216111.1 RefSeq:NP_336085.1
RefSeq:YP_006514984.1 ProteinModelPortal:P65499 SMR:P65499
PRIDE:P65499 EnsemblBacteria:EBMYCT00000003792
EnsemblBacteria:EBMYCT00000070104 GeneID:13316373 GeneID:886285
GeneID:924303 KEGG:mtc:MT1631 KEGG:mtu:Rv1595 KEGG:mtv:RVBD_1595
PATRIC:18125350 TubercuList:Rv1595 OMA:AMVYRAK ProtClustDB:PRK07804
Uniprot:P65499
Length = 527
Score = 484 (175.4 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 126/310 (40%), Positives = 178/310 (57%)
Query: 84 DFSVIGSGVAGLCYALEVAKHG-TVAVITKA-EPHESNTNYAQGGVSAVLCPSD-SVESH 140
D VIG+GVAGL AL + G +V V++KA + H + T+YAQGG++ VL +D SV++H
Sbjct: 11 DVVVIGTGVAGLAAALAADRAGRSVVVLSKAAQTHVTATHYAQGGIAVVLPDNDDSVDAH 70
Query: 141 MQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIV 200
+ DT+ AGA LCD + V + +G + +L+ GA D G L REGGHS RIV
Sbjct: 71 VADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTREGGHSRRRIV 130
Query: 201 HAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEV 259
HA D TG E++RAL +A + + H A+ +L DG AV G+ + + +
Sbjct: 131 HAGGDATGAEVQRALQDAAGM---LDIRTGHVALRVLH--DGT-AVT-GLLVVRPDGCGI 183
Query: 260 VRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTAL-ADE 318
+ S +LA+GG GH+Y +TTNP +TGDG+A+ A +S++EF+QFHPT L A
Sbjct: 184 ISAPS--VILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTMLFAGR 241
Query: 319 GLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLK 378
+P LITEA+RG+G IL + +LAPRDVVA +ID +LK
Sbjct: 242 AGGRRP--------LITEAIRGEGAILVDRQGNSITAGVHPMGDLAPRDVVAAAIDARLK 293
Query: 379 KRNEKYVLLD 388
+ V LD
Sbjct: 294 ATGDPCVYLD 303
Score = 473 (171.6 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 108/234 (46%), Positives = 139/234 (59%)
Query: 268 LLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTAL-ADEGLPIKPKK 326
+LA+GG GH+Y +TTNP +TGDG+A+ A +S++EF+QFHPT L A +P
Sbjct: 190 ILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTMLFAGRAGGRRP-- 247
Query: 327 TRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVL 386
LITEA+RG+G IL + +LAPRDVVA +ID +LK + V
Sbjct: 248 ------LITEAIRGEGAILVDRQGNSITAGVHPMGDLAPRDVVAAAIDARLKATGDPCVY 301
Query: 387 LDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGL 446
LD + E S FP + A C G+D QPIPVVP AHY CGG+ + G+T + GL
Sbjct: 302 LDA--RGIEGFASRFPTVTASCRAAGIDPVRQPIPVVPGAHYSCGGIVTDVYGQTELLGL 359
Query: 447 YVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKST--SIDLSASNW 498
Y AGEVA TGLHGANRLASNSLLE LV RA + + H + S S++ W
Sbjct: 360 YAAGEVARTGLHGANRLASNSLLEGLVVGGRAGKAAAAHAAAAGRSRATSSATW 413
Score = 65 (27.9 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 586 AKLVVSSALARHESRGLHYMVDFP-HVEENKR 616
A+ V ++ALAR ESRG H+ ++P V E R
Sbjct: 474 AQSVTAAALARTESRGCHHRAEYPCTVPEQAR 505
>UNIPROTKB|F1NHM1 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006105 "succinate metabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0022904 "respiratory electron transport chain"
evidence=IEA] InterPro:IPR011281 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 InterPro:IPR003953 Pfam:PF00890
GO:GO:0005739 GO:GO:0050660 GO:GO:0006099 GO:GO:0022904
GO:GO:0000104 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01816 GO:GO:0006105
GeneTree:ENSGT00390000010046 EMBL:AADN02008176 IPI:IPI00902413
Ensembl:ENSGALT00000030988 Uniprot:F1NHM1
Length = 499
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 152/454 (33%), Positives = 222/454 (48%)
Query: 175 GASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 234
G + R G +GG +H R AD TG + L + + S F +FA+D
Sbjct: 1 GKIYQRAFGGQSLQFGKGGQAH-RCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALD 58
Query: 235 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAM 294
LL + C GV L +E + RF +K T++A+GG G Y S T+ +TGDG AM
Sbjct: 59 LLME----NGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAM 114
Query: 295 AHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFM 354
RA ++EFVQFHPT + G LITE RG+GGIL N ERFM
Sbjct: 115 VTRAGLPCQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGILINSQGERFM 162
Query: 355 PLYDERA-ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAEC 408
Y A +LA RDVV+RS+ ++++ EK +V L + H P +++ + P I+
Sbjct: 163 ERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLATRLPGISETA 222
Query: 409 LKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGE--TNVRG-------LYVAGEVACTGLH 458
+ + G+D+T +PIPV+P HY GG+ +G+ T+V G LY GE A +H
Sbjct: 223 MIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVH 282
Query: 459 GANRLASNSLLEALVFARR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNIL 517
GANRL +NSLL+ +VF R A+ + K + N +V +L +
Sbjct: 283 GANRLGANSLLDLVVFGRACALTIAETCKPGEPVPSIKPNAGEESVA--NLDKLRFADGT 340
Query: 518 RRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEW-ETYLFEHG--WEQTFVGL 574
RT E R +Q M + + R+ + LQ ++ ++ + F+ G W V
Sbjct: 341 IRTSEARLNMQKTMQSHAAVFRTGSILQEGCEKLSQIYRDLAHLKTFDRGIVWNTDLV-- 398
Query: 575 EACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 608
E E++NL CA + A AR ESRG H D+
Sbjct: 399 ETLELQNLMLCALQTIYGAEARKESRGAHAREDY 432
>UNIPROTKB|Q8EJR4 [details] [associations]
symbol:frdA "Quinol:fumarate reductase FAD-binding subunit
FrdA" species:211586 "Shewanella oneidensis MR-1" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] InterPro:IPR003952 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 GO:GO:0006099 GO:GO:0022900
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0009061 GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01812 KO:K00244 ProtClustDB:PRK08626
RefSeq:NP_716036.1 HSSP:P17412 ProteinModelPortal:Q8EJR4 SMR:Q8EJR4
GeneID:1168275 KEGG:son:SO_0398 PATRIC:23520499 OMA:NAIAHPD
Uniprot:Q8EJR4
Length = 668
Score = 460 (167.0 bits), Expect = 3.0e-42, P = 3.0e-42
Identities = 163/526 (30%), Positives = 244/526 (46%)
Query: 128 SAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDG--- 184
+AV D + H QDT+ + CD E R+ P +REL G + R G
Sbjct: 57 NAVKGMGDDEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPRE 116
Query: 185 --------NLHLARE----------GGHSHHRIVHAADMTGREIERALLEAVVSDPNISV 226
L A E GG R + AD TG + A+ +S +I V
Sbjct: 117 VIVNAQKVTLQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAIS-MDIPV 175
Query: 227 FEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLV 286
E A+ L+ DG CHGV + + E+ +++K T +A+GG G IY +TN ++
Sbjct: 176 HERVEALALIH--DGER--CHGVVARCLISGELRAYVAKSTTIATGGYGRIYEVSTNAII 231
Query: 287 ATGDGMAMA-HRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGIL 345
G G A+A A + NME VQFHPTA+ G+ L TE RGDGG+L
Sbjct: 232 CEGIGQALALETGVATLGNMEAVQFHPTAIVPVGI------------LTTEGCRGDGGLL 279
Query: 346 YNLGMERFMPLYD-ERAELAPRDVVARSIDDQLKKR---NEKY---VLLDISHKPTEKIL 398
+ RFMP Y+ E+ ELA RDVV+R + + ++K + Y + LDI+ + I
Sbjct: 280 RDKDGYRFMPDYEPEKKELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIE 339
Query: 399 SHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGET-NVRGLYVAGEVACTG 456
++ + C + G+D IPV P HY GG+R GE+ ++GL+ GE AC
Sbjct: 340 TNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTKATGESPQLKGLFSVGEAACWD 399
Query: 457 LHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSAS--NWWTRTVVPKSLGCNVMH 514
+HG NRL NSL E +V + D ++ S++++ + + R V + + V
Sbjct: 400 MHGFNRLGGNSLAETVVGGMIIGKYIADFCENNSLEINTTLAEQFMRQVQTE-IDTLVDG 458
Query: 515 NILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWE-TYLFEHGWEQTFVG 573
+ E++ +Q IM YVGI R+ L A + EL+A E + ++
Sbjct: 459 DGHESPFELKHAMQRIMMDYVGIFRNGPELDKA---VTELKALLERSRKLGIKCKKRHAN 515
Query: 574 ---LEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKR 616
+EA ++ + A V A AR ESRG H D+P + N R
Sbjct: 516 PELVEALRVKRMLKVALTVACGAAARTESRGAHAREDYP--QRNDR 559
Score = 194 (73.4 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 87/319 (27%), Positives = 138/319 (43%)
Query: 82 YFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHE-SNTNYAQGGVSAVLCPS-----D 135
Y D V+G+G+AGL A+ + G ++ P + S++ AQGG+ A L + D
Sbjct: 5 YTDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVKGMGD 64
Query: 136 SVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDG------NLH-L 188
+ H QDT+ + CD E R+ P +REL G + R G N +
Sbjct: 65 DEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPREVIVNAQKV 124
Query: 189 AREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHG 248
+ H +++A D G + R A + ++ + AI ++D P V
Sbjct: 125 TLQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAI----SMDIP--VHER 178
Query: 249 VDTLN-VETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGD-GMAMAHRAQAVI-SNM 305
V+ L + E + L++ ++ STT +ATG G A+I +
Sbjct: 179 VEALALIHDGERCHGVVARCLISGELRAYVAKSTT---IATGGYGRIYEVSTNAIICEGI 235
Query: 306 EFVQFHPTALAD----EGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD-ER 360
T +A E + P L TE RGDGG+L + RFMP Y+ E+
Sbjct: 236 GQALALETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEK 295
Query: 361 AELAPRDVVARSIDDQLKK 379
ELA RDVV+R + + ++K
Sbjct: 296 KELASRDVVSRRMTEHMRK 314
>TIGR_CMR|SO_0398 [details] [associations]
symbol:SO_0398 "fumarate reductase flavoprotein subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] [GO:0006099 "tricarboxylic
acid cycle" evidence=ISS] [GO:0009061 "anaerobic respiration"
evidence=ISS] InterPro:IPR003952 InterPro:IPR014006
InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504 InterPro:IPR003953
Pfam:PF00890 GO:GO:0050660 GO:GO:0006099 GO:GO:0022900
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0009061 GO:GO:0000104
HOGENOM:HOG000160475 Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5
SUPFAM:SSF46977 TIGRFAMs:TIGR01812 KO:K00244 ProtClustDB:PRK08626
RefSeq:NP_716036.1 HSSP:P17412 ProteinModelPortal:Q8EJR4 SMR:Q8EJR4
GeneID:1168275 KEGG:son:SO_0398 PATRIC:23520499 OMA:NAIAHPD
Uniprot:Q8EJR4
Length = 668
Score = 460 (167.0 bits), Expect = 3.0e-42, P = 3.0e-42
Identities = 163/526 (30%), Positives = 244/526 (46%)
Query: 128 SAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDG--- 184
+AV D + H QDT+ + CD E R+ P +REL G + R G
Sbjct: 57 NAVKGMGDDEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPRE 116
Query: 185 --------NLHLARE----------GGHSHHRIVHAADMTGREIERALLEAVVSDPNISV 226
L A E GG R + AD TG + A+ +S +I V
Sbjct: 117 VIVNAQKVTLQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAIS-MDIPV 175
Query: 227 FEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLV 286
E A+ L+ DG CHGV + + E+ +++K T +A+GG G IY +TN ++
Sbjct: 176 HERVEALALIH--DGER--CHGVVARCLISGELRAYVAKSTTIATGGYGRIYEVSTNAII 231
Query: 287 ATGDGMAMA-HRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGIL 345
G G A+A A + NME VQFHPTA+ G+ L TE RGDGG+L
Sbjct: 232 CEGIGQALALETGVATLGNMEAVQFHPTAIVPVGI------------LTTEGCRGDGGLL 279
Query: 346 YNLGMERFMPLYD-ERAELAPRDVVARSIDDQLKKR---NEKY---VLLDISHKPTEKIL 398
+ RFMP Y+ E+ ELA RDVV+R + + ++K + Y + LDI+ + I
Sbjct: 280 RDKDGYRFMPDYEPEKKELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIE 339
Query: 399 SHFPNIAAECLKY-GLDITSQPIPVVPAAHYMCGGVRAGLQGET-NVRGLYVAGEVACTG 456
++ + C + G+D IPV P HY GG+R GE+ ++GL+ GE AC
Sbjct: 340 TNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTKATGESPQLKGLFSVGEAACWD 399
Query: 457 LHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSAS--NWWTRTVVPKSLGCNVMH 514
+HG NRL NSL E +V + D ++ S++++ + + R V + + V
Sbjct: 400 MHGFNRLGGNSLAETVVGGMIIGKYIADFCENNSLEINTTLAEQFMRQVQTE-IDTLVDG 458
Query: 515 NILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWE-TYLFEHGWEQTFVG 573
+ E++ +Q IM YVGI R+ L A + EL+A E + ++
Sbjct: 459 DGHESPFELKHAMQRIMMDYVGIFRNGPELDKA---VTELKALLERSRKLGIKCKKRHAN 515
Query: 574 ---LEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKR 616
+EA ++ + A V A AR ESRG H D+P + N R
Sbjct: 516 PELVEALRVKRMLKVALTVACGAAARTESRGAHAREDYP--QRNDR 559
Score = 194 (73.4 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 87/319 (27%), Positives = 138/319 (43%)
Query: 82 YFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHE-SNTNYAQGGVSAVLCPS-----D 135
Y D V+G+G+AGL A+ + G ++ P + S++ AQGG+ A L + D
Sbjct: 5 YTDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVKGMGD 64
Query: 136 SVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDG------NLH-L 188
+ H QDT+ + CD E R+ P +REL G + R G N +
Sbjct: 65 DEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPREVIVNAQKV 124
Query: 189 AREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHG 248
+ H +++A D G + R A + ++ + AI ++D P V
Sbjct: 125 TLQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAI----SMDIP--VHER 178
Query: 249 VDTLN-VETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGD-GMAMAHRAQAVI-SNM 305
V+ L + E + L++ ++ STT +ATG G A+I +
Sbjct: 179 VEALALIHDGERCHGVVARCLISGELRAYVAKSTT---IATGGYGRIYEVSTNAIICEGI 235
Query: 306 EFVQFHPTALAD----EGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD-ER 360
T +A E + P L TE RGDGG+L + RFMP Y+ E+
Sbjct: 236 GQALALETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEK 295
Query: 361 AELAPRDVVARSIDDQLKK 379
ELA RDVV+R + + ++K
Sbjct: 296 KELASRDVVSRRMTEHMRK 314
>UNIPROTKB|I3LS54 [details] [associations]
symbol:SDHA "Succinate dehydrogenase [ubiquinone]
flavoprotein subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0022904 "respiratory electron transport chain" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006105
"succinate metabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000104 "succinate dehydrogenase
activity" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] InterPro:IPR003952 InterPro:IPR011281
InterPro:IPR014006 InterPro:IPR015939 Pfam:PF02910 PROSITE:PS00504
InterPro:IPR003953 Pfam:PF00890 GO:GO:0005739 GO:GO:0007399
GO:GO:0050660 GO:GO:0006099 GO:GO:0022904 GO:GO:0000104 OMA:CFTADAT
Gene3D:1.20.58.100 PANTHER:PTHR11632:SF5 SUPFAM:SSF46977
TIGRFAMs:TIGR01816 GO:GO:0006105 GeneTree:ENSGT00390000010046
Ensembl:ENSSSCT00000031591 Uniprot:I3LS54
Length = 628
Score = 392 (143.0 bits), Expect = 6.7e-34, P = 6.7e-34
Identities = 161/553 (29%), Positives = 240/553 (43%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL--CPSDSVES 139
FD V+G+G AGL A +++ G A +TK P S+T AQGG++A L D+
Sbjct: 46 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRW 105
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS---- 195
H DT+ +L D + + + +L G F R EDG ++ GG S
Sbjct: 106 HFYDTVKGSDWLGDQDAIHYRTAPVFALVSQLENYGMPFSRTEDGKIYQRAFGGQSLKFG 165
Query: 196 ---HHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTL 252
AD TG + L + + S F +FA+DLL + C GV L
Sbjct: 166 KGGQAHCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIAL 220
Query: 253 NVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHP 312
+E + R + +LA G G Y S T+ +TGDG AM RA ++ F+
Sbjct: 221 CIEDGSIHRIRALSVILALKGYGRTYFSCTSAHTSTGDGTAMVTRAAVPPYSLFFLSSGR 280
Query: 313 TALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVAR 371
GL + + + + + T N R +Y A +LA RDVV+R
Sbjct: 281 DGKYG-GLVLVTSRCQLSRLVST-----------NSSCRRTFSIYGPVAKDLASRDVVSR 328
Query: 372 SIDDQLKKRN----EK-YVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAA 426
S+ ++++ EK +V L + H P E++ P + Y + IP
Sbjct: 329 SMTLEIREGRGCGPEKDHVYLQLHHLPPEQLXKE-PIPVLPTVHYNMG----GIPT---- 379
Query: 427 HYMCGGVRAGLQGETNV-RGLYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSID 484
+Y G V + G+ V GLY GE AC +HGANRL +NSLL+ +VF R A+ +
Sbjct: 380 NYK-GQVLRHVNGQDQVVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAES 438
Query: 485 HKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSL 544
+ + N +V+ +L N RT E+R +Q M + + R + L
Sbjct: 439 CRPGDKVPSIKPNAGEESVM--NLDKLRFANGTIRTSELRLSMQKSMQSHAAVFRVGSVL 496
Query: 545 QTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRG 601
Q +I L + + F+ G W V E E++NL CA + A AR ESRG
Sbjct: 497 QEGCEKILRLYGDLQHLKTFDRGMVWNTDLV--ETLELQNLMLCALQTIYGAEARKESRG 554
Query: 602 LHYMVDFPH-VEE 613
H DF V+E
Sbjct: 555 AHAREDFKERVDE 567
>UNIPROTKB|Q74DY8 [details] [associations]
symbol:frdA "Succinate dehydrogenase/fumarate reductase,
flavoprotein subunit" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR013027
InterPro:IPR015939 Pfam:PF02910 PRINTS:PR00368 InterPro:IPR003953
Pfam:PF00890 GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0009061 GO:GO:0000104 Gene3D:1.20.58.100 SUPFAM:SSF46977
KO:K00239 RefSeq:NP_952230.1 ProteinModelPortal:Q74DY8
DNASU:2686796 GeneID:2686796 KEGG:gsu:GSU1177 PATRIC:22025126
HOGENOM:HOG000160477 OMA:ECNFSDH ProtClustDB:PRK07573
BioCyc:GSUL243231:GH27-1163-MONOMER InterPro:IPR011280
PANTHER:PTHR11632:SF4 TIGRFAMs:TIGR01811 Uniprot:Q74DY8
Length = 637
Score = 187 (70.9 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 74/336 (22%), Positives = 141/336 (41%)
Query: 58 PVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEP 115
P+ + W R + + + + + V+G+G+AG A + + G A + P
Sbjct: 11 PIEKTWDKHRFD--MKLVNPANKRKYKILVVGTGLAGGAAAASLGELGYNVEAFCYQDSP 68
Query: 116 HESNTNYAQGGVSAVL-CPSD--SVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELI 172
+++ AQGG++A P+D S+ DTI G + + V + + I + +
Sbjct: 69 RRAHSIAAQGGINAAKNYPNDGDSIYRLFYDTIKGGDFRAREADVWRLAQVSNNIIDQCV 128
Query: 173 AIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAV---VSDPNISVFEH 229
A G F R G L GG R +A TG+++ A+ + + +F
Sbjct: 129 AQGVPFARDYAGYLDNRSFGGAQVSRTFYARGQTGQQLLLGAYSALARQIKAGTVKMFPR 188
Query: 230 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATG 289
+DL+ +DG G+ ++ T E+ + +L +GG +++ +TN + +
Sbjct: 189 TEMLDLVV-VDGE---AKGITIRDLVTGEIRTHVGDAVVLCTGGYVNVFYLSTNAMGCSV 244
Query: 290 DGMAMAHRAQAVISNMEFVQFHPTALADEG-----LPIKPKKTRENSFLITEAVRGDG-- 342
AH+ A +N + Q HPT + G L + + R + +GD
Sbjct: 245 TAAWKAHKKGAFFANPCYTQIHPTCIPQHGDKQSKLTLMSESLRNDGRCWVPKKQGDNRA 304
Query: 343 -GILYNLGMERFMPL-YDERAELAPRDVVARSIDDQ 376
G + + + ++ Y LAPRD+ +R+ +Q
Sbjct: 305 PGQIPDEDRDYYLERKYPSFGNLAPRDIASRAAKEQ 340
Score = 172 (65.6 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 76/269 (28%), Positives = 119/269 (44%)
Query: 357 YDERAELAPRDVVARSIDDQLKKRNE-----KYVLLD----ISHKPTEKILSHFPNIAAE 407
Y LAPRD+ +R+ +Q + V LD I I + N+ E
Sbjct: 321 YPSFGNLAPRDIASRAAKEQCDDNRGVGPGGRGVYLDFASSIQRLGESTIRERYGNLF-E 379
Query: 408 CLKYGLDITSQPIP--VVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLAS 465
+ D + +P + PA HY GG+ +NV GL+V GE A +HGANRL +
Sbjct: 380 MYEKITDENAYKVPMRIYPAPHYSMGGLWVDYNCMSNVPGLFVLGE-ANFSVHGANRLGA 438
Query: 466 NSLLEALVFARRAVQPSI-DH-KKSTSIDLSASN-WWTRTV--VPKSLGCNVMHNILRRT 520
++L++ L + +I D+ + T + A + ++V V L V N +
Sbjct: 439 SALMQGLADGYFVIPYTIADYLARITPGKVKADHPECKKSVEDVNNDLKKFVSINGKKTV 498
Query: 521 KEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAE-WETYLFEHGWEQTFVGLE-ACE 578
E +EL IMW VG+ RS S + A I ++ E W+ + LE A
Sbjct: 499 TEFHRELGKIMWNNVGMARSEESCKEALKVIPQIREEFWKNVKVSGSGAEFNQQLENAGR 558
Query: 579 MRNLFCCAKLVVSSALARHESRGLHYMVD 607
+ + A+L+ AL R+ES G H+ V+
Sbjct: 559 VADFLEFAELMTLDALHRNESCGGHFRVE 587
>TIGR_CMR|GSU_1177 [details] [associations]
symbol:GSU_1177 "fumarate reductase, flavoprotein subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] InterPro:IPR013027 InterPro:IPR015939
Pfam:PF02910 PRINTS:PR00368 InterPro:IPR003953 Pfam:PF00890
GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
GO:GO:0000104 Gene3D:1.20.58.100 SUPFAM:SSF46977 KO:K00239
RefSeq:NP_952230.1 ProteinModelPortal:Q74DY8 DNASU:2686796
GeneID:2686796 KEGG:gsu:GSU1177 PATRIC:22025126
HOGENOM:HOG000160477 OMA:ECNFSDH ProtClustDB:PRK07573
BioCyc:GSUL243231:GH27-1163-MONOMER InterPro:IPR011280
PANTHER:PTHR11632:SF4 TIGRFAMs:TIGR01811 Uniprot:Q74DY8
Length = 637
Score = 187 (70.9 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 74/336 (22%), Positives = 141/336 (41%)
Query: 58 PVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEP 115
P+ + W R + + + + + V+G+G+AG A + + G A + P
Sbjct: 11 PIEKTWDKHRFD--MKLVNPANKRKYKILVVGTGLAGGAAAASLGELGYNVEAFCYQDSP 68
Query: 116 HESNTNYAQGGVSAVL-CPSD--SVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELI 172
+++ AQGG++A P+D S+ DTI G + + V + + I + +
Sbjct: 69 RRAHSIAAQGGINAAKNYPNDGDSIYRLFYDTIKGGDFRAREADVWRLAQVSNNIIDQCV 128
Query: 173 AIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAV---VSDPNISVFEH 229
A G F R G L GG R +A TG+++ A+ + + +F
Sbjct: 129 AQGVPFARDYAGYLDNRSFGGAQVSRTFYARGQTGQQLLLGAYSALARQIKAGTVKMFPR 188
Query: 230 HFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATG 289
+DL+ +DG G+ ++ T E+ + +L +GG +++ +TN + +
Sbjct: 189 TEMLDLVV-VDGE---AKGITIRDLVTGEIRTHVGDAVVLCTGGYVNVFYLSTNAMGCSV 244
Query: 290 DGMAMAHRAQAVISNMEFVQFHPTALADEG-----LPIKPKKTRENSFLITEAVRGDG-- 342
AH+ A +N + Q HPT + G L + + R + +GD
Sbjct: 245 TAAWKAHKKGAFFANPCYTQIHPTCIPQHGDKQSKLTLMSESLRNDGRCWVPKKQGDNRA 304
Query: 343 -GILYNLGMERFMPL-YDERAELAPRDVVARSIDDQ 376
G + + + ++ Y LAPRD+ +R+ +Q
Sbjct: 305 PGQIPDEDRDYYLERKYPSFGNLAPRDIASRAAKEQ 340
Score = 172 (65.6 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 76/269 (28%), Positives = 119/269 (44%)
Query: 357 YDERAELAPRDVVARSIDDQLKKRNE-----KYVLLD----ISHKPTEKILSHFPNIAAE 407
Y LAPRD+ +R+ +Q + V LD I I + N+ E
Sbjct: 321 YPSFGNLAPRDIASRAAKEQCDDNRGVGPGGRGVYLDFASSIQRLGESTIRERYGNLF-E 379
Query: 408 CLKYGLDITSQPIP--VVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLAS 465
+ D + +P + PA HY GG+ +NV GL+V GE A +HGANRL +
Sbjct: 380 MYEKITDENAYKVPMRIYPAPHYSMGGLWVDYNCMSNVPGLFVLGE-ANFSVHGANRLGA 438
Query: 466 NSLLEALVFARRAVQPSI-DH-KKSTSIDLSASN-WWTRTV--VPKSLGCNVMHNILRRT 520
++L++ L + +I D+ + T + A + ++V V L V N +
Sbjct: 439 SALMQGLADGYFVIPYTIADYLARITPGKVKADHPECKKSVEDVNNDLKKFVSINGKKTV 498
Query: 521 KEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAE-WETYLFEHGWEQTFVGLE-ACE 578
E +EL IMW VG+ RS S + A I ++ E W+ + LE A
Sbjct: 499 TEFHRELGKIMWNNVGMARSEESCKEALKVIPQIREEFWKNVKVSGSGAEFNQQLENAGR 558
Query: 579 MRNLFCCAKLVVSSALARHESRGLHYMVD 607
+ + A+L+ AL R+ES G H+ V+
Sbjct: 559 VADFLEFAELMTLDALHRNESCGGHFRVE 587
>WB|WBGene00018610 [details] [associations]
symbol:F48E8.3 species:6239 "Caenorhabditis elegans"
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0008340 "determination
of adult lifespan" evidence=IMP] InterPro:IPR010960
InterPro:IPR003953 Pfam:PF00890 GO:GO:0008340 EMBL:FO081421
HSSP:P83223 eggNOG:COG1053 GO:GO:0000104 TIGRFAMs:TIGR01813
HOGENOM:HOG000227327 GeneTree:ENSGT00650000094148 PIR:T16413
RefSeq:NP_498164.3 ProteinModelPortal:Q09567 SMR:Q09567
STRING:Q09567 PaxDb:Q09567 EnsemblMetazoa:F48E8.3.1
EnsemblMetazoa:F48E8.3.2 EnsemblMetazoa:F48E8.3.3 GeneID:175751
KEGG:cel:CELE_F48E8.3 UCSC:F48E8.3.1 CTD:175751 WormBase:F48E8.3
InParanoid:Q09567 OMA:KVDFYKD NextBio:889488 Uniprot:Q09567
Length = 493
Score = 179 (68.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 84/296 (28%), Positives = 128/296 (43%)
Query: 87 VIGSGVAGLCYALEVAKHGTVAVITKAEPHES-NTNYAQGGVSAV-------LCPSDSVE 138
V+G G+AGL +L++ G ++ + E + N+ A G++ L DS E
Sbjct: 13 VVGGGLAGLSASLDIINGGGRVILVEGEGNTGGNSAKASSGINGAGTETQEKLGIKDSPE 72
Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHR 198
++DT+ AG D + V ++ D + E + G D D NL GGHS R
Sbjct: 73 LLVKDTLSAGDSENDKKLVEILAANSADAV-EFLR-GVEVDL-TDVNLC----GGHSVPR 125
Query: 199 IVH--AADMTGREIERA--LLEAVVSDPNISVFEHHFAIDLLTT--LDG---PDAVCHGV 249
H + GR I +++ + + N E+ A LLT + G + G+
Sbjct: 126 -THWIPSPKEGRPIPAGFEIMKRLRTRLNEKQSENPEAFKLLTQTKMVGILRENGKVSGI 184
Query: 250 DTLNVETQEVVRFISKVTLLASGG-----------AGHIYP-STTNPLVATGDGMAMAHR 297
+ + + E + I +LA+GG I+ TTN A GDG+ +A
Sbjct: 185 EIVTSASGEKSKIIGDAVILATGGFSADETLLKEFGAEIFGFPTTNGAFAKGDGVKIARA 244
Query: 298 AQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERF 353
A I ME +Q HPTA D P P + FL EA+RG G +L N +RF
Sbjct: 245 LGAKIIGMENIQIHPTAFVD---PKDP--SAGTKFLAAEAIRGKGALLINSKGQRF 295
Score = 124 (48.7 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 56/161 (34%), Positives = 78/161 (48%)
Query: 346 YNLGMERFMPLYDERAELAPRDVVARSIDDQ-LKKRNEKYVL-LD-ISHKPTEKILSHFP 402
Y++ +++F Y+ AELA A ID+ +K E+Y D S P K + FP
Sbjct: 350 YSI-VKKFFAKYENSAELAK----ALGIDESAIKTTLEEYQKSFDGKSEDPFGKKV--FP 402
Query: 403 NIAAECLKYGLDITSQPIP---VVPAAHYMCGGVRAGL-------QGETNVRGLYVAGEV 452
A ++PI VVPA HY GG++ G+ V GL+ AGEV
Sbjct: 403 VSAIS--------PTEPIYAAIVVPAIHYTMGGLKIDEATRVIDEHGKPIV-GLFAAGEV 453
Query: 453 ACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDL 493
G+HG+NRLA NSLLE +VF R A + + T +L
Sbjct: 454 T-GGVHGSNRLAGNSLLECVVFGRIAGKSAAQSAAETRTEL 493
>CGD|CAL0005898 [details] [associations]
symbol:OSM1 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=IDA] InterPro:IPR010960
InterPro:IPR003953 CGD:CAL0005898 Pfam:PF00890 GO:GO:0000104
TIGRFAMs:TIGR01813 EMBL:AACQ01000145 EMBL:AACQ01000144
RefSeq:XP_712811.1 RefSeq:XP_712840.1 ProteinModelPortal:Q59T35
STRING:Q59T35 GeneID:3645541 GeneID:3645573 KEGG:cal:CaO19.14171
KEGG:cal:CaO19.6882 Uniprot:Q59T35
Length = 503
Score = 204 (76.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 105/341 (30%), Positives = 154/341 (45%)
Query: 79 SVKYFDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVLC----- 132
S+ +D VIGSG+AGL +++K G VA++ K+E N+ A G++ V
Sbjct: 15 SIAKYDTIVIGSGLAGLTTTYQLSKAGQKVALLEKSEKLGGNSIKASSGINGVPTKYQKQ 74
Query: 133 PS-DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGED-GNLHLAR 190
PS DS+ES +QDT+ G L D + V ++ D I L S + D N+ L
Sbjct: 75 PSTDSIESFVQDTLKTGKNLNDKKMVDILTKNSRDAIYWL-----SDEINVDLSNVVLL- 128
Query: 191 EGGHSHHRIVHAADMT--GREIERALLEAV----VSDPN-ISVFEHHFAIDLLTTLDGPD 243
GGHSH R H D G I AL + + +P+ +++ + +LT +G
Sbjct: 129 -GGHSHAR-THKGDKLPPGFAIVSALTKKLDGFQAENPDQLTILKSSTLTKILT--EGNK 184
Query: 244 AVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTT----------------NPLVA 287
G++ + E Q + V +LA+GG + S T N
Sbjct: 185 V--KGIEFTDSEKQPQEMYADNV-VLATGGFSADFDSPTSLLQKYRPDLLGFPSSNGAQT 241
Query: 288 TGDGMAMAHR-AQAVISNMEFVQFHPTALADEGLPIKPKKTREN-SFLITEAVRGDGGIL 345
TGDG +A R A + +M+ VQ HPT +K EN FL E +RG GGIL
Sbjct: 242 TGDGQKIAERDVNAELIHMDKVQVHPTGF------MKVSNPNENWKFLCGELMRGIGGIL 295
Query: 346 YN--LGMERFMPLYDERAELAPRDVVARSI--DDQLKKRNE 382
+ G RF+ EL PRDVV ++ Q+ + NE
Sbjct: 296 LSPVTGW-RFVD------ELQPRDVVTDAVLKHSQIGQNNE 329
Score = 95 (38.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 424 PAAHYMCGGVRAG--------LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
P H+ GG++ G+T + L+ GEV+ G+HG NRL +SLLE +VF
Sbjct: 434 PVVHFTMGGIKVNPSNAKVVTKSGDT-ISNLFAIGEVSA-GVHGNNRLGGSSLLECVVFG 491
Query: 476 R 476
R
Sbjct: 492 R 492
>UNIPROTKB|Q59T35 [details] [associations]
symbol:OSM1 "Potential fumarate reductase" species:237561
"Candida albicans SC5314" [GO:0005575 "cellular_component"
evidence=IDA] InterPro:IPR010960 InterPro:IPR003953 CGD:CAL0005898
Pfam:PF00890 GO:GO:0000104 TIGRFAMs:TIGR01813 EMBL:AACQ01000145
EMBL:AACQ01000144 RefSeq:XP_712811.1 RefSeq:XP_712840.1
ProteinModelPortal:Q59T35 STRING:Q59T35 GeneID:3645541
GeneID:3645573 KEGG:cal:CaO19.14171 KEGG:cal:CaO19.6882
Uniprot:Q59T35
Length = 503
Score = 204 (76.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 105/341 (30%), Positives = 154/341 (45%)
Query: 79 SVKYFDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAVLC----- 132
S+ +D VIGSG+AGL +++K G VA++ K+E N+ A G++ V
Sbjct: 15 SIAKYDTIVIGSGLAGLTTTYQLSKAGQKVALLEKSEKLGGNSIKASSGINGVPTKYQKQ 74
Query: 133 PS-DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGED-GNLHLAR 190
PS DS+ES +QDT+ G L D + V ++ D I L S + D N+ L
Sbjct: 75 PSTDSIESFVQDTLKTGKNLNDKKMVDILTKNSRDAIYWL-----SDEINVDLSNVVLL- 128
Query: 191 EGGHSHHRIVHAADMT--GREIERALLEAV----VSDPN-ISVFEHHFAIDLLTTLDGPD 243
GGHSH R H D G I AL + + +P+ +++ + +LT +G
Sbjct: 129 -GGHSHAR-THKGDKLPPGFAIVSALTKKLDGFQAENPDQLTILKSSTLTKILT--EGNK 184
Query: 244 AVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTT----------------NPLVA 287
G++ + E Q + V +LA+GG + S T N
Sbjct: 185 V--KGIEFTDSEKQPQEMYADNV-VLATGGFSADFDSPTSLLQKYRPDLLGFPSSNGAQT 241
Query: 288 TGDGMAMAHR-AQAVISNMEFVQFHPTALADEGLPIKPKKTREN-SFLITEAVRGDGGIL 345
TGDG +A R A + +M+ VQ HPT +K EN FL E +RG GGIL
Sbjct: 242 TGDGQKIAERDVNAELIHMDKVQVHPTGF------MKVSNPNENWKFLCGELMRGIGGIL 295
Query: 346 YN--LGMERFMPLYDERAELAPRDVVARSI--DDQLKKRNE 382
+ G RF+ EL PRDVV ++ Q+ + NE
Sbjct: 296 LSPVTGW-RFVD------ELQPRDVVTDAVLKHSQIGQNNE 329
Score = 95 (38.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 424 PAAHYMCGGVRAG--------LQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
P H+ GG++ G+T + L+ GEV+ G+HG NRL +SLLE +VF
Sbjct: 434 PVVHFTMGGIKVNPSNAKVVTKSGDT-ISNLFAIGEVSA-GVHGNNRLGGSSLLECVVFG 491
Query: 476 R 476
R
Sbjct: 492 R 492
>UNIPROTKB|P0C278 [details] [associations]
symbol:fccA "Fumarate reductase flavoprotein subunit"
species:56812 "Shewanella frigidimarina" [GO:0009055 "electron
carrier activity" evidence=NAS] [GO:0009061 "anaerobic respiration"
evidence=NAS] [GO:0019645 "anaerobic electron transport chain"
evidence=NAS] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=NAS] InterPro:IPR007087 InterPro:IPR010960
InterPro:IPR013027 PRINTS:PR00368 InterPro:IPR003953 Pfam:PF00890
GO:GO:0009055 GO:GO:0046872 GO:GO:0008270 GO:GO:0030288
GO:GO:0000104 GO:GO:0019645 EMBL:AJ132010 PDB:1E39 PDB:1JRX
PDB:1JRY PDB:1JRZ PDB:1KSS PDB:1KSU PDB:1LJ1 PDB:1M64 PDB:1P2E
PDB:1P2H PDB:1Q9I PDB:1QJD PDB:1Y0P PDB:2B7R PDB:2B7S PDBsum:1E39
PDBsum:1JRX PDBsum:1JRY PDBsum:1JRZ PDBsum:1KSS PDBsum:1KSU
PDBsum:1LJ1 PDBsum:1M64 PDBsum:1P2E PDBsum:1P2H PDBsum:1Q9I
PDBsum:1QJD PDBsum:1Y0P PDBsum:2B7R PDBsum:2B7S
ProteinModelPortal:P0C278 SMR:P0C278 SABIO-RK:P0C278
EvolutionaryTrace:P0C278 Gene3D:1.10.1130.10 InterPro:IPR011031
InterPro:IPR012286 TIGRFAMs:TIGR01813 PROSITE:PS51008
Uniprot:P0C278
Length = 571
Score = 187 (70.9 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 108/415 (26%), Positives = 180/415 (43%)
Query: 13 HFGG-IRCKGQSCQQASLVSSLTFNGC--IQRELSWFLRFQRFNFSHSPVSENWKSLRTV 69
HF G + C SC A S + + C + + ++QR + + ++++ KS R
Sbjct: 61 HFPGEVACT--SCHSAHEKSMVYCDSCHSFDFNMPYAKKWQRDEPTIAELAKD-KSERQA 117
Query: 70 PVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPH-ESNTNYAQGGVS 128
+ S D +V D V+GSG AG A+ G ++ + EP N A GG++
Sbjct: 118 ALASAPHD-TV---DVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMN 173
Query: 129 AVLCP-------SDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASF-DR 180
A +DS E +DT+ G + D V+V+ + D + + A+GA D
Sbjct: 174 AAWTDQQKAKKITDSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLTDV 233
Query: 181 GEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT--- 237
G G + R HR A + G + + L + V NI + + I++L
Sbjct: 234 GMMGGASVNRA-----HRPTGGAGV-GAHVVQVLYDNAVKR-NIDLRMNTRGIEVLKDDK 286
Query: 238 -TLDG--PDAVCHG-----VDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATG 289
T+ G + G D + + T + +V L G I ST P A G
Sbjct: 287 GTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFI--STNQP-GAVG 343
Query: 290 DGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLG 349
DG+ +A A + +M+++Q HPT L +K ++TEAVRG+G IL N
Sbjct: 344 DGLDVAENAGGALKDMQYIQAHPT------LSVK------GGVMVTEAVRGNGAILVNRE 391
Query: 350 MERFMPLYDERAELAPRDVVARS-------IDDQLKK---RNEKYVLLDISHKPT 394
+RF+ R + A ++A++ DD ++K + +KY+ L ++ PT
Sbjct: 392 GKRFVNEITTR-DKASAAILAQTGKSAYLIFDDSVRKSLSKIDKYIGLGVA--PT 443
Score = 111 (44.1 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 420 IPVVPAAHYMCGGVRAGLQGET-NVR-----GLYVAGEVACTGLHGANRLASNSLLEALV 473
I V P H+ GGV + E N + GLY AGEV G+HGANRL N++ + +
Sbjct: 497 IEVTPGVHHTMGGVMIDTKAEVMNAKKQVIPGLYGAGEVT-GGVHGANRLGGNAISDIIT 555
Query: 474 FARRAVQPSIDHKK 487
F R A + + + K
Sbjct: 556 FGRLAGEEAAKYSK 569
>CGD|CAL0001569 [details] [associations]
symbol:OSM2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0071454 "cellular
response to anoxia" evidence=IEA] [GO:0016156 "fumarate reductase
(NADH) activity" evidence=IEA] InterPro:IPR001199
InterPro:IPR010960 InterPro:IPR018506 Pfam:PF00173 PRINTS:PR00363
PROSITE:PS00191 PROSITE:PS50255 InterPro:IPR003953 CGD:CAL0001569
Pfam:PF00890 GO:GO:0046872 GO:GO:0020037 Gene3D:3.10.120.10
SUPFAM:SSF55856 EMBL:AACQ01000010 EMBL:AACQ01000009 GO:GO:0000104
eggNOG:COG5274 TIGRFAMs:TIGR01813 RefSeq:XP_722209.1
RefSeq:XP_722323.1 ProteinModelPortal:Q5AKX2 GeneID:3636028
GeneID:3636193 KEGG:cal:CaO19.12472 KEGG:cal:CaO19.5005
Uniprot:Q5AKX2
Length = 648
Score = 170 (64.9 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 79/287 (27%), Positives = 124/287 (43%)
Query: 135 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNL--HLAREG 192
DSVE QDT+ + E ++V+ D + L + D L H
Sbjct: 69 DSVEQFYQDTLASAKDRAHPELIKVLTYNSADAVHWLQEV-FDLDLTVVSRLGGHSQPRT 127
Query: 193 GHSHHRIVHAADMTGREIERALLEAVV-SDPN-ISVFEHHFAIDLLTTLDGPDAVCHGVD 250
H +T R +ER LE + ++P+ + + ++ IDL+ D GV
Sbjct: 128 HRGHDAKFPGMAITYRLLER--LETLSETEPDRVVILKNSQVIDLIMEQDNKVV---GVK 182
Query: 251 TLNVETQEVVRFISKVTLLASGGAGHI--------Y-PS-----TTNPLVATGDGMAMAH 296
N++ + V L G A Y P +TN ATGDG +
Sbjct: 183 YKNLKDKSKHELYGPVILSTGGYAADFTKNSLIRKYRPDIIDLPSTNGGHATGDGQKIVQ 242
Query: 297 RAQAVISNMEFVQFHPTALA---DEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERF 353
+ + + +M+ +Q HPT L D+ + ++ KKT FL EA+RG+GGI++N ERF
Sbjct: 243 KNKGQVLDMDKIQVHPTGLISYKDKDI-VERKKTPRFLFLGAEALRGEGGIIFNSKGERF 301
Query: 354 MPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSH 400
+ EL RD V+ +D Q+K+ N + L +S K E + H
Sbjct: 302 VD------ELGTRDWVSGEMDKQIKQGNFP-IRLVLSEKAGENLKFH 341
Score = 111 (44.1 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 31/93 (33%), Positives = 44/93 (47%)
Query: 400 HFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAG------LQGETNVRGLYVAGEVA 453
+FP A +Y D + P H+ GGV+ ++ GLY AGEVA
Sbjct: 393 YFP---ATPFEYSPDAKYHVSFITPVLHFTMGGVKINDKTQVIADNDSPFEGLYAAGEVA 449
Query: 454 CTGLHGANRLASNSLLEALVFARRAVQPSIDHK 486
G+HG NRL +SLL +V+ R A + +K
Sbjct: 450 -GGVHGHNRLGGSSLLACVVYGRLAADQASSYK 481
Score = 106 (42.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 56/215 (26%), Positives = 92/215 (42%)
Query: 87 VIGSGVAGLCYALEVAKHGTVAVITKAEPHES-NTNYAQGGVSAVLCPS-------DSVE 138
++G G+AGL A + G V+ E S N+ A G++ L + DSVE
Sbjct: 13 IVGGGLAGLSAAHQAYLRGANVVLLDKESFLSGNSGKATSGINGALTRTQVNLKIPDSVE 72
Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHR 198
QDT+ + E ++V+ D + L + FD D + ++R GGHS R
Sbjct: 73 QFYQDTLASAKDRAHPELIKVLTYNSADAVHWLQEV---FDL--DLTV-VSRLGGHSQPR 126
Query: 199 IV--HAADMTGREIERALLEAVVS----DPN-ISVFEHHFAIDLLTTLDGPDAVCHGVDT 251
H A G I LLE + + +P+ + + ++ IDL+ D GV
Sbjct: 127 THRGHDAKFPGMAITYRLLERLETLSETEPDRVVILKNSQVIDLIMEQDNKVV---GVKY 183
Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLV 286
N++ + V +L++GG + T N L+
Sbjct: 184 KNLKDKSKHELYGPV-ILSTGGYAADF--TKNSLI 215
>TIGR_CMR|SO_0970 [details] [associations]
symbol:SO_0970 "fumarate reductase flavoprotein subunit
precursor" species:211586 "Shewanella oneidensis MR-1" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] InterPro:IPR010960 InterPro:IPR013027
PRINTS:PR00368 InterPro:IPR003953 Pfam:PF00890 GO:GO:0046872
eggNOG:COG1053 GO:GO:0022900 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0042597 GO:GO:0000104 KO:K00244
Gene3D:1.10.1130.10 InterPro:IPR011031 InterPro:IPR012286
TIGRFAMs:TIGR01813 PROSITE:PS51008 RefSeq:NP_716599.1 PDB:1D4C
PDB:1D4D PDB:1D4E PDBsum:1D4C PDBsum:1D4D PDBsum:1D4E
ProteinModelPortal:P83223 SMR:P83223 GeneID:1168814
KEGG:son:SO_0970 PATRIC:23521593 HOGENOM:HOG000227327 OMA:SIMITES
ProtClustDB:CLSK906032 EvolutionaryTrace:P83223 Uniprot:P83223
Length = 596
Score = 170 (64.9 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 102/359 (28%), Positives = 147/359 (40%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHES-NTNYAQGGVSAV-------LCPSD 135
D +IGSG AGL A+ G ++ + EP NT A GG++A L D
Sbjct: 152 DVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIED 211
Query: 136 SVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASF-DRGEDGNLHLAREGGH 194
+ + DT+ G + D E V+V+ D I L ++GA D G G + R
Sbjct: 212 KKQIMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRS--- 268
Query: 195 SHHRIVHAADMTGREIERALLE-AVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLN 253
HR A + G + + L + AV +I + ++ L+ GV
Sbjct: 269 --HRPTGGAGV-GAHVAQVLWDNAVKRGTDIRLNSR-----VVRILEDASGKVTGVLVKG 320
Query: 254 VETQEVVRFISKVTLLASGGAGHI-----Y-PS-----TTNPLVATGDGMAMAHRAQAVI 302
T V V + A G A + Y P TN ATGDG+ +A +A A
Sbjct: 321 EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQAGAAT 380
Query: 303 SNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER-- 360
++E++Q HPT G+ +ITEAVRG+G I+ N RFM R
Sbjct: 381 RDLEYIQAHPTYSPAGGV------------MITEAVRGNGAIVVNREGNRFMNEITTRDK 428
Query: 361 ---AELAPRDVVARSI-DDQLKKRN---EKYVLLDI--SHKPTEKILSHFPNIAAECLK 410
A L + A + DD ++K E YV L+I K E++ AAE K
Sbjct: 429 ASAAILQQKGESAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAK 487
Score = 103 (41.3 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 420 IPVVPAAHYMCGGV----RAGLQGETN---VRGLYVAGEVACTGLHGANRLASNSLLEAL 472
+ + PA H+ GG+ +A ++ E + GLY AGEV G+HGANRL N++ + +
Sbjct: 521 LEIAPAVHHTMGGLVIDTKAEVKSEKTGKPITGLYAAGEVT-GGVHGANRLGGNAISDIV 579
Query: 473 VFARRA 478
+ R A
Sbjct: 580 TYGRIA 585
>POMBASE|SPAC17A2.05 [details] [associations]
symbol:osm1 "fumerate reductase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IC]
[GO:0006106 "fumarate metabolic process" evidence=ISS] [GO:0016156
"fumarate reductase (NADH) activity" evidence=ISS]
InterPro:IPR010960 InterPro:IPR003953 PomBase:SPAC17A2.05
Pfam:PF00890 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
EMBL:CU329670 HSSP:P83223 eggNOG:COG1053 GO:GO:0006099
GO:GO:0000104 TIGRFAMs:TIGR01813 HOGENOM:HOG000227327 GO:GO:0006106
OrthoDB:EOG43V340 GO:GO:0016156 PIR:T37806 RefSeq:NP_594239.1
ProteinModelPortal:O13755 STRING:O13755 EnsemblFungi:SPAC17A2.05.1
GeneID:2542206 KEGG:spo:SPAC17A2.05 OMA:HTAYRTH NextBio:20803276
Uniprot:O13755
Length = 513
Score = 138 (53.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 85/332 (25%), Positives = 129/332 (38%)
Query: 87 VIGSGVAGLCYALEVAK-HGTVAVITKAEPHESNTNYAQGGVSAVLCP-------SDSVE 138
VIG G+AGL + G V ++ K N+ A G++A SDSV
Sbjct: 43 VIGGGLAGLSATNTILDLGGNVLLLDKNTAFGGNSVKAASGINAAPTQLQFDQHVSDSVN 102
Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIA-IGASFDRGEDGNLHLAREGGHSH- 196
+ D+I++ E +R + ++ + L G D+ L+R GHS
Sbjct: 103 TFYNDSILSAKSKAKPELLRTLTSKSSSAVDWLSERFGLQMDQ-------LSRLAGHSEP 155
Query: 197 --HRIVHAADMTGREIERALLEAV----VSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
HR H D + + L++ S P+ + + + L T D V GV+
Sbjct: 156 RTHRGTHP-DYPFKPLAFVLVDQTEKFAASHPDRLQIKKNARVTRLLTNPNHDKV-FGVE 213
Query: 251 TLNVETQEVVRFISKVTLLASGGAGH--------IY-P-----STTNPLVATGDGMAMAH 296
+++ + V L G A +Y P STTN TGDG M
Sbjct: 214 YMDLSDKSNHTVYGPVVLATGGYAADYSDDSLLKLYHPEALSLSTTNGPYCTGDGHKMVM 273
Query: 297 RAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPL 356
+++ VQ HPT D P P T FL EA+RG G +L RF
Sbjct: 274 SIGGSTVDLDLVQIHPTGFVD---PKDP--TALTKFLAAEALRGSGAVLLTSQGRRFCD- 327
Query: 357 YDERAELAPRDVVARSIDDQLKKRNEKYVLLD 388
EL RD V + +K ++ Y++L+
Sbjct: 328 -----ELGYRDYVT---GEMMKLKSPVYLVLN 351
Score = 121 (47.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 30/65 (46%), Positives = 37/65 (56%)
Query: 422 VVPAAHYMCGGVRAGLQGE---TN---VRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
VVP HY GGV+ Q TN + GL+ AGE+ G+HG NRL +SLL +VF
Sbjct: 430 VVPVLHYTMGGVQVDTQSRVLSTNGNVIDGLFAAGEIV-GGIHGENRLGGSSLLACVVFG 488
Query: 476 RRAVQ 480
R A Q
Sbjct: 489 RLAGQ 493
>SGD|S000000773 [details] [associations]
symbol:FRD1 "Soluble fumarate reductase" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0071454 "cellular response to anoxia"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016156
"fumarate reductase (NADH) activity" evidence=IEA;IDA] [GO:0005840
"ribosome" evidence=IDA] [GO:0000104 "succinate dehydrogenase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR010960 InterPro:IPR003953
SGD:S000000773 Pfam:PF00890 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 eggNOG:COG1053 EMBL:BK006939 EMBL:U18779
GO:GO:0000104 GO:GO:0071454 TIGRFAMs:TIGR01813 HOGENOM:HOG000227327
PIR:S30830 RefSeq:NP_010867.3 RefSeq:NP_010871.3
ProteinModelPortal:P32614 SMR:P32614 DIP:DIP-5287N IntAct:P32614
MINT:MINT-534771 STRING:P32614 PaxDb:P32614 PeptideAtlas:P32614
EnsemblFungi:YEL047C GeneID:856664 GeneID:856668 KEGG:sce:YEL043W
KEGG:sce:YEL047C CYGD:YEL047c GeneTree:ENSGT00650000094148
OMA:HSKGSVD OrthoDB:EOG43V340 NextBio:982666 Genevestigator:P32614
GermOnline:YEL047C GO:GO:0016156 Uniprot:P32614
Length = 470
Score = 139 (54.0 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 34/89 (38%), Positives = 49/89 (55%)
Query: 410 KYGLDITSQPI----PVVPAAHYMCGGVRA-------GLQGETNVRGLYVAGEVACTGLH 458
++G D+T + + V P H+ GG R G E ++GLY AGEV+ G+H
Sbjct: 383 EFGSDVTPETVVFIGEVTPVVHFTMGGARINVKAQVIGKNDERLLKGLYAAGEVS-GGVH 441
Query: 459 GANRLASNSLLEALVFARRAVQPSIDHKK 487
GANRL +SLLE +VF R A + + +K
Sbjct: 442 GANRLGGSSLLECVVFGRTAAESIANDRK 470
Score = 110 (43.8 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 281 TTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRG 340
TTN TGDG + + A + +M+ +Q HPT D ++ FL E++RG
Sbjct: 219 TTNGQQTTGDGQRLLQKLGADLIDMDQIQVHPTGFIDPN-----DRSSSWKFLAAESLRG 273
Query: 341 DGGILYN-LGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLL 387
GGIL N + RF+ EL RDVV +I + + + +L+
Sbjct: 274 LGGILLNPITGRRFVN------ELTTRDVVTAAIQKVCPQEDNRALLV 315
>ASPGD|ASPL0000043709 [details] [associations]
symbol:AN10296 species:162425 "Emericella nidulans"
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0071454 "cellular
response to anoxia" evidence=IEA] [GO:0016156 "fumarate reductase
(NADH) activity" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR010960 InterPro:IPR003953 Pfam:PF00890 GO:GO:0005829
GO:GO:0005739 EMBL:BN001307 GO:GO:0005840 GO:GO:0000104
GO:GO:0071454 TIGRFAMs:TIGR01813 HOGENOM:HOG000227327 OMA:HSKGSVD
EnsemblFungi:CADANIAT00009057 Uniprot:C8VNG1
Length = 484
Score = 125 (49.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 86/333 (25%), Positives = 143/333 (42%)
Query: 87 VIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSAV----LCPSDSVESHM 141
V+G+G+AGL A ++ H V ++ +AE N+ A G++ DS E
Sbjct: 18 VVGTGLAGLSTATQLTTHNVPVILLERAERPGGNSIKASSGINGAGTKFQTVPDSAEEFY 77
Query: 142 QDTI-VAGAYLCDDETVRVVCTEGPDRIRELI---AIGA----SFDRGEDGNLHLAREGG 193
DT+ AG T V E +R+ + + GA S + G D + +A+ GG
Sbjct: 78 DDTVRSAGKPFA---TAANVERERRERLIHTVTRNSKGAVDWLSDEIGVDLS-KVAQLGG 133
Query: 194 HSHHRIVHAADM---TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVD 250
HS R H + G I +LL+ + S+P + + +L + + V GV+
Sbjct: 134 HSKPR-THRGEKGKPPGAAIIGSLLDKLKSNPFVDMRMKSRVTKVLK--EAQEVV--GVE 188
Query: 251 TLNVETQEVVRFISKVTLLASGG-AGHI------YPSTTNPLVATGDG----MAMAHRAQ 299
+++ E + + + ASGG AG + Y L +T + +
Sbjct: 189 Y--IDSDEKTQSLRGPVIFASGGFAGDVRGMVAQYRPDLAGLPSTNEAREGSQPLLAEVG 246
Query: 300 AVISNMEFVQFHPTALADEGLPIKPKKTREN-SFLITEAVRGDGGILYNLGMERFMPLYD 358
A + +M+ +Q HPT D K T FL EA+RG+GGIL RF+ +
Sbjct: 247 AGLIDMDHIQIHPTGFLDA------KDTSAAVKFLAAEALRGEGGILLLDNGARFVNELE 300
Query: 359 ERAELAPRDVVARS---IDDQLKKRNEKYVLLD 388
R + D + +S +D L++ + +LLD
Sbjct: 301 TREHVT--DAILKSATKLDTDLRQWDVT-LLLD 330
Score = 123 (48.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/61 (49%), Positives = 35/61 (57%)
Query: 422 VVPAAHYMCGGVRAGLQGE------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFA 475
V P H+ GGV QG+ T +RGL+ AGEV GLHG NRL +SLLE VF
Sbjct: 405 VTPVLHFTMGGVLFNEQGQVLDQTWTPIRGLWAAGEVT-GGLHGQNRLGGSSLLECAVFG 463
Query: 476 R 476
R
Sbjct: 464 R 464
>ASPGD|ASPL0000044947 [details] [associations]
symbol:AN1543 species:162425 "Emericella nidulans"
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001199 InterPro:IPR010960 Pfam:PF00173
PROSITE:PS50255 InterPro:IPR003953 Pfam:PF00890 EMBL:BN001307
GO:GO:0020037 EMBL:AACD01000025 Gene3D:3.10.120.10 SUPFAM:SSF55856
GO:GO:0000104 eggNOG:COG5274 TIGRFAMs:TIGR01813
HOGENOM:HOG000227327 OrthoDB:EOG43V340 RefSeq:XP_659147.1
ProteinModelPortal:Q5BD37 EnsemblFungi:CADANIAT00008171
GeneID:2875387 KEGG:ani:AN1543.2 OMA:IEWHCKH Uniprot:Q5BD37
Length = 627
Score = 148 (57.2 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 91/308 (29%), Positives = 132/308 (42%)
Query: 105 GTVAVITKAEPHESNTNYAQGGVSAVLCPS-------DSVESHMQDTIVAGAYLCDDETV 157
G+V V+ K N+ A G++ L + DSV+ DT+ + + +
Sbjct: 26 GSVLVLDKQAFFGGNSTKATSGINGALTRTQVDLNIRDSVKQFYDDTLKSARDKARPDLI 85
Query: 158 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIV--HAADMTGREIERALL 215
+V+ + + L + F+ D L ++R GGHS R H A G I AL+
Sbjct: 86 KVLTYKSAAAVEWLQDV---FNL--DLTL-VSRLGGHSQPRTHRGHDAKFPGMAITYALM 139
Query: 216 EAVV----SDPN-ISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLA 270
+ + SDP+ + + + A DG +AV GV T V+ + + V +LA
Sbjct: 140 QRLEELSESDPDRVQIIKK--ARVTAVNKDG-NAVT-GV-TFEVDGE--TKTADGVVILA 192
Query: 271 SGGAGHIY----------PST-----TNPLVATGDGMAMAHRAQAVISNMEFVQFHPTAL 315
+GG + P T TN ATGDG M A +M+ VQ HPT L
Sbjct: 193 TGGYAADFGDSSLLKKHRPDTFGLSSTNGTHATGDGQKMLMSIGANGIDMDKVQVHPTGL 252
Query: 316 ADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDD 375
D P P T + FL EA+RG+GG+L N ERF EL RD V+
Sbjct: 253 VD---PKDP--TAKFKFLAAEALRGEGGLLLNSDGERFSD------ELGHRDYVS----G 297
Query: 376 QLKKRNEK 383
Q+ K EK
Sbjct: 298 QMWKEKEK 305
Score = 97 (39.2 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 409 LKYGLDITSQPIPVVPAAHYMCGGVRAGLQGET-NVR-----GLYVAGEVACTGLHGANR 462
L + +D + P H+ GG+ + E N GLY GE+A G+HGANR
Sbjct: 381 LPFSIDDEFHVALMEPVLHFTMGGIEINDRAEVLNSEHKPFDGLYACGELA-GGVHGANR 439
Query: 463 LASNSLLEALVFARRA 478
L +SLL +V+ R A
Sbjct: 440 LGGSSLLGCVVYGRVA 455
>TIGR_CMR|SO_1421 [details] [associations]
symbol:SO_1421 "fumarate reductase flavoprotein subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] [GO:0006099 "tricarboxylic
acid cycle" evidence=ISS] [GO:0009061 "anaerobic respiration"
evidence=ISS] InterPro:IPR010960 InterPro:IPR013027 PRINTS:PR00368
InterPro:IPR003953 Pfam:PF00890 HSSP:P83223 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000104 KO:K00244
InterPro:IPR011031 TIGRFAMs:TIGR01813 PROSITE:PS51008
HOGENOM:HOG000227327 ProtClustDB:CLSK906032 RefSeq:NP_717041.1
ProteinModelPortal:Q8EH10 GeneID:1169240 KEGG:son:SO_1421
PATRIC:23522494 OMA:ICANNED Uniprot:Q8EH10
Length = 589
Score = 128 (50.1 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 86/360 (23%), Positives = 146/360 (40%)
Query: 54 FSHS-PVSENWK--SLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTV-AV 109
FS+ PV +N++ + + + L ++ VIG+G AG A+ +HG V
Sbjct: 116 FSNDKPVLDNYQFPEVTQEMIETALAKAPLEQHQVIVIGAGAAGHAAAISARQHGVADVV 175
Query: 110 ITKAEPH-ESNTNYAQGGVSAVLCPSDSVESH-------MQDTIVAGAYLCDDETVRVVC 161
I + +P+ N+ A GG+SA + +++ + +DT+ G + + + V+++
Sbjct: 176 ILEKQPYIGGNSMLAAGGMSAAETVTQALKHYPDSKALWYEDTMKGGHNINNPDLVKILT 235
Query: 162 TEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSD 221
G + L A+GA H A HR A +G EI L E
Sbjct: 236 ENGSAGVDWLQAMGADLTSASSAGGHNAER----LHRPTGGAK-SGPEIVNTLKETA-QK 289
Query: 222 PNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGG-------A 274
+ + I L+ G V GV + + ++ +K ++ASGG
Sbjct: 290 LGVETRTNSKVIQLVQNKQG---VITGV-LVQGKHSKLHILGAKAVIIASGGFARNNELV 345
Query: 275 GHIYP------STTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTR 328
P +T NP GD + A + A I +++ +Q PTA A +
Sbjct: 346 AKYRPDLKGVDATNNP-GNVGDALTFAPKVGADIVDVKEIQAFPTAAAGK---------- 394
Query: 329 ENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLD 388
+I+ RG G I+ N ERF E+ PRD V+ I Q K + +++ D
Sbjct: 395 ---MVISGTARGAGAIMLNNDGERFCD------EMGPRDKVSECIWAQ--KGKDAWLVFD 443
Score = 117 (46.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 420 IPVVPAAHYMCGGVRAGLQGET---N---VRGLYVAGEVACTGLHGANRLASNSLLEALV 473
+ + PA H+ GG++ + E N ++GL+ AGEV G+HGANRLA N++ + +V
Sbjct: 517 VKIKPAVHHTMGGLKINTKTEVIDQNGLPIKGLFAAGEVT-GGVHGANRLAGNAIADTIV 575
Query: 474 FARRA 478
F R A
Sbjct: 576 FGRIA 580
>SGD|S000003812 [details] [associations]
symbol:OSM1 "Fumarate reductase, catalyzes the reduction of
fumarate to succinate" species:4932 "Saccharomyces cerevisiae"
[GO:0016156 "fumarate reductase (NADH) activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071454 "cellular response to anoxia" evidence=IGI] [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] InterPro:IPR010960
InterPro:IPR003953 SGD:S000003812 Pfam:PF00890 GO:GO:0005739
EMBL:BK006943 eggNOG:COG1053 EMBL:L36344 GO:GO:0000104
GO:GO:0071454 EMBL:M37696 EMBL:L26347 TIGRFAMs:TIGR01813
HOGENOM:HOG000227327 GeneTree:ENSGT00650000094148 OrthoDB:EOG43V340
GO:GO:0016156 EMBL:Z49551 PIR:S46591 RefSeq:NP_012585.1
ProteinModelPortal:P21375 SMR:P21375 DIP:DIP-5426N IntAct:P21375
MINT:MINT-494436 STRING:P21375 PaxDb:P21375 PeptideAtlas:P21375
EnsemblFungi:YJR051W GeneID:853510 KEGG:sce:YJR051W CYGD:YJR051w
OMA:ASISAHD NextBio:974171 Genevestigator:P21375 GermOnline:YJR051W
Uniprot:P21375
Length = 501
Score = 125 (49.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 71/230 (30%), Positives = 104/230 (45%)
Query: 188 LAREGGHSHHRIVHAADMT--GREIERAL---LEAVVS-DPN-ISVFEHHFAIDLLTTLD 240
LA+ GGHS R ++ G EI +AL L+ + S D N + + + +D+ LD
Sbjct: 143 LAQLGGHSVPRTHRSSGKLPPGFEIVQALSKKLKDISSKDSNLVQIMLNSEVVDI--ELD 200
Query: 241 GPDAVCHGVDTLNVE-TQEVVRFISKVTLLASGGAGH------------IYPSTTNPLVA 287
V GV ++ +++++ S + SGG G+ I+ TTN
Sbjct: 201 NQGHVT-GVVYMDENGNRKIMK--SHHVVFCSGGFGYSKEMLKEYSPNLIHLPTTNGKQT 257
Query: 288 TGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENS--FLITEAVRGDGGIL 345
TGDG + + A + +M+ VQ HPT D P REN+ FL EA+RG GGIL
Sbjct: 258 TGDGQKILSKLGAELIDMDQVQVHPTGFID------PND-RENNWKFLAAEALRGLGGIL 310
Query: 346 YNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTE 395
+ R EL+ RD V I + K N+ LL +S K E
Sbjct: 311 LHPTTGRRFT-----NELSTRDTVTMEIQSKCPK-NDNRALLVMSDKVYE 354
Score = 106 (42.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 422 VVPAAHYMCGGVRAGLQGET------NV--RGLYVAGEVACTGLHGANRLASNSLLEALV 473
V P H+ GGV+ + + +V G++ AGEV+ G+HGANRL +SLLE +V
Sbjct: 430 VTPVVHFTMGGVKINEKSQVIKKNSESVLSNGIFAAGEVS-GGVHGANRLGGSSLLECVV 488
Query: 474 FARRA 478
F + A
Sbjct: 489 FGKTA 493
>UNIPROTKB|G4N741 [details] [associations]
symbol:MGG_03619 "Fumarate reductase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001199 InterPro:IPR010960 Pfam:PF00173
PROSITE:PS50255 InterPro:IPR003953 Pfam:PF00890 GO:GO:0020037
Gene3D:3.10.120.10 SUPFAM:SSF55856 EMBL:CM001234 GO:GO:0000104
TIGRFAMs:TIGR01813 RefSeq:XP_003716273.1 ProteinModelPortal:G4N741
EnsemblFungi:MGG_03619T0 GeneID:2676946 KEGG:mgr:MGG_03619
Uniprot:G4N741
Length = 619
Score = 125 (49.1 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 79/290 (27%), Positives = 121/290 (41%)
Query: 105 GTVAVITKAEPHESNTNYAQGGVSAVLCPS-------DSVESHMQDTIVAGAYLCDDETV 157
G V V+ K N+ A G++ L + DSV+ DT+ + + +
Sbjct: 26 GNVVVLDKQGFFGGNSTKATSGINGALTRTQVEHGIQDSVKQFYDDTLKSARDKARPDLI 85
Query: 158 RVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIV--HAADMTGREIERALL 215
+V+ + + L + F+ D L ++R GGHS R H A G I AL+
Sbjct: 86 KVLTYKSAAAVEWLQDV---FNL--DLTL-VSRLGGHSQPRTHRGHDAKFPGMAITYALM 139
Query: 216 ----EAVVSDPN-ISVFEHHFAIDLL---TTLDGP----DAVCHGVD-TLNVETQEVVRF 262
E ++P+ + + + +L + G D H +D + + T
Sbjct: 140 QRLEELAETEPHRVEIVKKARVTNLNKEGNKVTGVTYEHDGQKHTMDGPVVLATGGYAAD 199
Query: 263 ISKVTLLASGGAGHIYPSTTNPLVATGDG--MAMAHRAQAVISNMEFVQFHPTALADEGL 320
S+ +LL +TTN ATGDG M MA + +M+ VQ HPT L D
Sbjct: 200 FSETSLLKKHRPDTYGLATTNGSHATGDGQKMVMAIGGNGI--DMDKVQVHPTGLVD--- 254
Query: 321 PIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVA 370
P P + FL EA+RG+GG+L N +RF EL RD V+
Sbjct: 255 PKDPGSKWK--FLAAEALRGEGGLLLNADGDRFCD------ELGHRDYVS 296
Score = 102 (41.0 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 424 PAAHYMCGGV----RAGLQGETN--VRGLYVAGEVACTGLHGANRLASNSLLEALVFARR 477
P H+ GGV ++ + G+ + GLY GE+A G+HGANRL +SLL +V+ R
Sbjct: 396 PVLHFTMGGVEINDKSEVLGQDKKPIEGLYACGELA-GGVHGANRLGGSSLLGCVVYGRV 454
Query: 478 A 478
A
Sbjct: 455 A 455
>TIGR_CMR|SO_3058 [details] [associations]
symbol:SO_3058 "flavocytochrome c flavin subunit, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR010960
InterPro:IPR013027 PRINTS:PR00368 InterPro:IPR003953 Pfam:PF00890
InterPro:IPR006311 EMBL:AE014299 GenomeReviews:AE014299_GR
PROSITE:PS51318 GO:GO:0000104 TIGRFAMs:TIGR01813
HOGENOM:HOG000227327 HSSP:P10902 RefSeq:NP_718623.1
ProteinModelPortal:Q8ECS4 GeneID:1170744 KEGG:son:SO_3058
PATRIC:23525754 OMA:IGANPIH ProtClustDB:CLSK906975 Uniprot:Q8ECS4
Length = 517
Score = 118 (46.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVL-CP-------SD 135
D V+GSG AG+ AL+ + G ++ P + GG AV P D
Sbjct: 49 DVLVVGSGFAGMSAALQARESGVKVMVIDKMPVFGGNSTINGGAMAVAGSPLQKQAGIED 108
Query: 136 SVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHS 195
SV++ + D + AG + D E +++VC + + LI D G + GGHS
Sbjct: 109 SVDAMVADMLRAGRGMNDVEMLKLVCNGTAESCQWLI------DYGVHWKPFVQHFGGHS 162
Query: 196 HHRIVHAADMTGREIERALLEA 217
R++ + +G I R L++A
Sbjct: 163 VQRVLQTVESSGAGIIRPLIKA 184
Score = 102 (41.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 424 PAAHYMCGGVRAGLQGE-----TN--VRGLYVAGEVACTGLHGANRLASNSLLEALVFAR 476
P HY GGV+ Q E +N + GLY AGE A G+HGA+RL + ++ E +V R
Sbjct: 442 PKVHYCMGGVKVNTQSEVLHLVSNKAIPGLYAAGE-ATGGIHGASRLGACAVAEGVVTGR 500
Query: 477 RA 478
A
Sbjct: 501 NA 502
>TIGR_CMR|SO_4620 [details] [associations]
symbol:SO_4620 "fumarate reductase, flavoprotein subunit
precursor" species:211586 "Shewanella oneidensis MR-1" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] InterPro:IPR007329 InterPro:IPR010960
InterPro:IPR013027 Pfam:PF04205 PRINTS:PR00368 SMART:SM00900
InterPro:IPR003953 Pfam:PF00890 GO:GO:0016020 HSSP:P83223
GO:GO:0006810 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0010181
GO:GO:0000104 KO:K00244 TIGRFAMs:TIGR01813 HOGENOM:HOG000227327
OMA:KVDFYKD RefSeq:NP_720136.1 ProteinModelPortal:Q8CVD0
GeneID:1172203 KEGG:son:SO_4620 PATRIC:23528903
ProtClustDB:CLSK907736 Uniprot:Q8CVD0
Length = 582
Score = 104 (41.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 64/257 (24%), Positives = 102/257 (39%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGTVAVITKAEP--------HESNTNYAQGGVSAVLCPS 134
+D +IGSG AG LE G AVI + P + N A V + +
Sbjct: 133 YDVVIIGSGGAGFSAGLEAIAAGRSAVIIEKMPIIGGNSLISGAEMNVAGSWVQKNMGIT 192
Query: 135 DSVESHMQDTIVAGAYLCDDETVRVVCTEG---PDRIRELIAIGASFDRGEDGNLHLARE 191
DS E + DT+ G + D E V+ + + +R+ + + D+ L +
Sbjct: 193 DSKELFISDTLKGGDFKGDPEMVKTMVDNAVGAAEWLRDYVKVEFYPDQ-------LFQF 245
Query: 192 GGHSHHRIVHAADMTGRE-IERALLEA-VVSDP-NISVFEHHFAIDLLTTLDGPDAVCHG 248
GGHS R + TG E I + ++A V P + + D + G +A +G
Sbjct: 246 GGHSVKRALIPKGHTGAEVISKFSIKADEVGLPIHTNTKAEKLIQDQTGRIVGVEAAHNG 305
Query: 249 VD-TLNVETQEVVR---FISKVTLLASGGA--GHIYPSTTNPLVATGDGMAMAHRAQAVI 302
T + + V+ F S + + Y ST + TGDG+ MA + A
Sbjct: 306 KTITYHAKRGVVIATGGFSSNMEMRKKYNPELDERYGSTGHA-GGTGDGIVMAEKIHAAA 364
Query: 303 SNMEFVQFHPTALADEG 319
NM ++Q +P G
Sbjct: 365 KNMGYIQSYPICSPTSG 381
Score = 91 (37.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 413 LDITSQP---IPVVPAAHYMCGGV----RAGLQGETN--VRGLYVAGEVACTGL-HGANR 462
+D++ P + P+ H+ GG+ R + E + GL+ AGEV TGL HG NR
Sbjct: 503 VDLSKGPYWILKATPSVHHTMGGLVVDTRTRVLDEQGKVIPGLFAAGEV--TGLTHGTNR 560
Query: 463 LASNSLLEALVFARRAVQ 480
L N+ + +V+ R A Q
Sbjct: 561 LGGNAYTDIIVYGRIAGQ 578
>UNIPROTKB|Q8EC43 [details] [associations]
symbol:SO_3301 "Flavocytochrome c flavin subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR010960
InterPro:IPR013027 PRINTS:PR00368 InterPro:IPR003953 Pfam:PF00890
GO:GO:0009055 HSSP:P83223 InterPro:IPR006311 EMBL:AE014299
GenomeReviews:AE014299_GR PROSITE:PS51318 GO:GO:0000104
TIGRFAMs:TIGR01813 HOGENOM:HOG000227327 RefSeq:NP_718855.1
ProteinModelPortal:Q8EC43 GeneID:1170988 KEGG:son:SO_3301
PATRIC:23526282 OMA:GGNSAIC ProtClustDB:CLSK907094 Uniprot:Q8EC43
Length = 499
Score = 99 (39.9 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 40/127 (31%), Positives = 52/127 (40%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTNYAQGGVSAVLCP----- 133
K FD +IGSG AGL A K G + V+ K E N+ G + L P
Sbjct: 35 KEFDIIIIGSGFAGLSAAYSAHKAGIKNIIVLEKMEAFGGNSAICGGLMCMPLTPMQKKL 94
Query: 134 --SDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLARE 191
DS E ++D + AG E R + TE L+ G F +D + L
Sbjct: 95 GIEDSAELMIKDMLKAGRGFNHPELCRTLATEAHKAYDMLMECGVKF---QDKVIRL--- 148
Query: 192 GGHSHHR 198
GGHS R
Sbjct: 149 GGHSAPR 155
Score = 82 (33.9 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 420 IPVVPAAHYMCGGVRAGLQGE---TN----VRGLYVAGEVACTGLHGANRLASNSLLEAL 472
I + P HY GGV E +N + GL+ AGEV G HG +RL S ++ L
Sbjct: 426 IRLSPKLHYCMGGVAITPNAEVIDSNTCEPISGLFAAGEVT-GGTHGMDRLGGCSSIDGL 484
Query: 473 VFARRA 478
VF + A
Sbjct: 485 VFGQIA 490
Score = 37 (18.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 329 ENSFLITEAVRGDGGI 344
+N + E +RGD G+
Sbjct: 183 QNRTNVEEIIRGDSGV 198
>TIGR_CMR|SO_3301 [details] [associations]
symbol:SO_3301 "flavocytochrome c flavin subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR010960
InterPro:IPR013027 PRINTS:PR00368 InterPro:IPR003953 Pfam:PF00890
GO:GO:0009055 HSSP:P83223 InterPro:IPR006311 EMBL:AE014299
GenomeReviews:AE014299_GR PROSITE:PS51318 GO:GO:0000104
TIGRFAMs:TIGR01813 HOGENOM:HOG000227327 RefSeq:NP_718855.1
ProteinModelPortal:Q8EC43 GeneID:1170988 KEGG:son:SO_3301
PATRIC:23526282 OMA:GGNSAIC ProtClustDB:CLSK907094 Uniprot:Q8EC43
Length = 499
Score = 99 (39.9 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 40/127 (31%), Positives = 52/127 (40%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTNYAQGGVSAVLCP----- 133
K FD +IGSG AGL A K G + V+ K E N+ G + L P
Sbjct: 35 KEFDIIIIGSGFAGLSAAYSAHKAGIKNIIVLEKMEAFGGNSAICGGLMCMPLTPMQKKL 94
Query: 134 --SDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLARE 191
DS E ++D + AG E R + TE L+ G F +D + L
Sbjct: 95 GIEDSAELMIKDMLKAGRGFNHPELCRTLATEAHKAYDMLMECGVKF---QDKVIRL--- 148
Query: 192 GGHSHHR 198
GGHS R
Sbjct: 149 GGHSAPR 155
Score = 82 (33.9 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 420 IPVVPAAHYMCGGVRAGLQGE---TN----VRGLYVAGEVACTGLHGANRLASNSLLEAL 472
I + P HY GGV E +N + GL+ AGEV G HG +RL S ++ L
Sbjct: 426 IRLSPKLHYCMGGVAITPNAEVIDSNTCEPISGLFAAGEVT-GGTHGMDRLGGCSSIDGL 484
Query: 473 VFARRA 478
VF + A
Sbjct: 485 VFGQIA 490
Score = 37 (18.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 329 ENSFLITEAVRGDGGI 344
+N + E +RGD G+
Sbjct: 183 QNRTNVEEIIRGDSGV 198
>UNIPROTKB|Q8EH17 [details] [associations]
symbol:SO_1414 "Flavocytochrome c flavin subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR010960
InterPro:IPR003953 Pfam:PF00890 GO:GO:0009055 HSSP:P83223
InterPro:IPR006311 EMBL:AE014299 GenomeReviews:AE014299_GR
PROSITE:PS51318 GO:GO:0000104 TIGRFAMs:TIGR01813
HOGENOM:HOG000227327 RefSeq:NP_717034.1 ProteinModelPortal:Q8EH17
GeneID:1169233 KEGG:son:SO_1414 PATRIC:23522480 OMA:WGSPDEG
ProtClustDB:CLSK906251 Uniprot:Q8EH17
Length = 506
Score = 99 (39.9 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 42/172 (24%), Positives = 70/172 (40%)
Query: 84 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTNYAQGGVSAVLCP-------- 133
D V+GSG AGL AL + G ++ V+ K + N+ G ++ P
Sbjct: 43 DIIVVGSGFAGLSSALNAKRQGLGSILVLEKMQVIGGNSAINGGWLAIPKNPIQLAQGIQ 102
Query: 134 SDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGG 193
DS E ++D I++G + + + +R + D + I G F G + + GG
Sbjct: 103 DDSPEELVKDQIISGRGMQNTDMLRQMANRALDAYQLCIDAGVKFREGFNQQV-----GG 157
Query: 194 HSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAV 245
H+ R + G +I L E V + H+ D + +DG V
Sbjct: 158 HNKARAIRTQHGVGGDITTKLYE-VGKKEGVEYRLQHYVEDFI--MDGQQIV 206
Score = 77 (32.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 424 PAAHYMCGGVRAGL-----QGET--NVRGLYVAGEVACTGLHGANRLASNSLLEAL 472
P HY GG++ L +T ++ LY GE A G HG RL+S + LE L
Sbjct: 436 PKVHYCMGGLKTDLGARVLHSQTLAPMKNLYAVGE-ATGGTHGGTRLSSTACLECL 490
>TIGR_CMR|SO_1414 [details] [associations]
symbol:SO_1414 "flavocytochrome c flavin subunit, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR010960
InterPro:IPR003953 Pfam:PF00890 GO:GO:0009055 HSSP:P83223
InterPro:IPR006311 EMBL:AE014299 GenomeReviews:AE014299_GR
PROSITE:PS51318 GO:GO:0000104 TIGRFAMs:TIGR01813
HOGENOM:HOG000227327 RefSeq:NP_717034.1 ProteinModelPortal:Q8EH17
GeneID:1169233 KEGG:son:SO_1414 PATRIC:23522480 OMA:WGSPDEG
ProtClustDB:CLSK906251 Uniprot:Q8EH17
Length = 506
Score = 99 (39.9 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 42/172 (24%), Positives = 70/172 (40%)
Query: 84 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTNYAQGGVSAVLCP-------- 133
D V+GSG AGL AL + G ++ V+ K + N+ G ++ P
Sbjct: 43 DIIVVGSGFAGLSSALNAKRQGLGSILVLEKMQVIGGNSAINGGWLAIPKNPIQLAQGIQ 102
Query: 134 SDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGG 193
DS E ++D I++G + + + +R + D + I G F G + + GG
Sbjct: 103 DDSPEELVKDQIISGRGMQNTDMLRQMANRALDAYQLCIDAGVKFREGFNQQV-----GG 157
Query: 194 HSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAV 245
H+ R + G +I L E V + H+ D + +DG V
Sbjct: 158 HNKARAIRTQHGVGGDITTKLYE-VGKKEGVEYRLQHYVEDFI--MDGQQIV 206
Score = 77 (32.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 424 PAAHYMCGGVRAGL-----QGET--NVRGLYVAGEVACTGLHGANRLASNSLLEAL 472
P HY GG++ L +T ++ LY GE A G HG RL+S + LE L
Sbjct: 436 PKVHYCMGGLKTDLGARVLHSQTLAPMKNLYAVGE-ATGGTHGGTRLSSTACLECL 490
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 641 641 0.00093 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 624 (66 KB)
Total size of DFA: 369 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.88u 0.17s 52.05t Elapsed: 00:00:02
Total cpu time: 51.91u 0.17s 52.08t Elapsed: 00:00:03
Start: Tue May 21 09:41:09 2013 End: Tue May 21 09:41:12 2013