RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 006532
(641 letters)
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 203 bits (517), Expect = 6e-61
Identities = 101/301 (33%), Positives = 147/301 (48%), Gaps = 18/301 (5%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQ 142
D +IGSG AGL AL +A V V++K E +T YAQGG++AV +DS++SH++
Sbjct: 8 CDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVE 67
Query: 143 DTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGE----DGNLHLAREGGHSHHR 198
DT++AGA +CD V V + ++ LI G FD + + HL REGGHSH R
Sbjct: 68 DTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRR 127
Query: 199 IVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG---PDAVCHGVDTLNVE 255
I+HAAD TGRE+E L+ ++ PNI V E A+DL+ + G N
Sbjct: 128 ILHAADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRN 187
Query: 256 TQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTAL 315
+ V +K +LA+GGA +Y TTNP +++GDG+AMA RA ++N V
Sbjct: 188 KETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANCGGVMVDDHGR 247
Query: 316 ADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDD 375
D + + + G + N +E + A D+ R
Sbjct: 248 TD------VEGLYAIGEVSYTGLHGANRMASNSLLECLVY-----GWSAAEDITRRMPYA 296
Query: 376 Q 376
Sbjct: 297 H 297
Score = 69.9 bits (170), Expect = 1e-13
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 411 YGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLE 470
G I A+ V G T+V GLY GEV+ TGLHGANR+ASNSLLE
Sbjct: 220 SGDGIAMAWRAGCRVANCGGVMV--DDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLE 277
Query: 471 ALVFARRA 478
LV+ A
Sbjct: 278 CLVYGWSA 285
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 196 bits (499), Expect = 5e-58
Identities = 102/341 (29%), Positives = 156/341 (45%), Gaps = 34/341 (9%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPS--DS 136
V+ FD VIG+G AG+ AL++++ G T A+++K P S+T AQGG++ L + D+
Sbjct: 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDN 64
Query: 137 VESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREG---- 192
E HM DT+ Y+ D + + +C GP+ I EL +G F R +DG ++ G
Sbjct: 65 WEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSK 124
Query: 193 ---GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
G R AAD TG + L + + + + ++F +A+DL+ DG C +
Sbjct: 125 NFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGCTAL 183
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQ 309
ET EVV F ++ T+LA+GGAG IY STTN + TGDG+ MA RA + +
Sbjct: 184 CI---ETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVP--VQDMMG 238
Query: 310 FHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVV 369
PT + + L + K E V G L+ +G E L ++
Sbjct: 239 GIPTKVTGQALTVNEK---------GEDVVVPG--LFAVG-EIACVSVHGANRLGGNSLL 286
Query: 370 ARSI------DDQLKKRNEKYVLLDISHKPTEKILSHFPNI 404
+ + E+ L D S E L
Sbjct: 287 DLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRW 327
Score = 65.3 bits (158), Expect = 5e-12
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 418 QPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARR 477
+ +P + V GL+ GE+AC +HGANRL NSLL+ +VF R
Sbjct: 235 DMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRA 294
Query: 478 A 478
A
Sbjct: 295 A 295
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 187 bits (474), Expect = 8e-55
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 23/313 (7%)
Query: 82 YFDFSVIGSGVAGLCYALEVAKHG---TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVE 138
D +++G+G AGL A+ A+ +A+I+K P S+T A+GG +AV DS E
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFE 64
Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHR 198
H DT+ G +LC+ + V P + +L G + R DG++++ R GG R
Sbjct: 65 YHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIER 124
Query: 199 IVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQE 258
AAD TG + L + + P I F+ HF +D+L D G+ +N+
Sbjct: 125 TWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD----DGHVRGLVAMNMMEGT 180
Query: 259 VVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADE 318
+V+ + ++A+GGAG +Y TN + TGDGM MA + +M ++
Sbjct: 181 LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMGGIETDQNC---- 236
Query: 319 GLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFM----------PLYDERAELAPRDV 368
+ K + + G + N E + +
Sbjct: 237 --ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNEAAI 294
Query: 369 VARSIDDQLKKRN 381
A++ + + ++
Sbjct: 295 EAQAAGVEQRLKD 307
Score = 45.4 bits (106), Expect = 1e-05
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 440 ETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRA 478
ET ++GL+ GE + GLHGANRL SNSL E +VF R A
Sbjct: 237 ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLA 275
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 172 bits (436), Expect = 9e-49
Identities = 55/343 (16%), Positives = 109/343 (31%), Gaps = 37/343 (10%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-----VAVITKAEPHESNTNYAQGG--------VSA 129
D +IG G +G A E A V ++ KA S AQG ++
Sbjct: 22 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGA-VAQGLSAINTYIDLTG 80
Query: 130 VLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLA 189
+++E +++ + L ++ V + G + DG
Sbjct: 81 RSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVRE 140
Query: 190 REGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
+ H + + +++E F +LL + G
Sbjct: 141 GQWQIMIHGESYKPIIAEAAKMAVG--------EENIYERVFIFELLK-DNNDPNAVAGA 191
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIY---------PSTTNPLVATGDGMAMAHRAQA 300
+V + F +K +LA+GGA ++ T + TG G M +A A
Sbjct: 192 VGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKAGA 251
Query: 301 VISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDER 360
+++ F P L E K + N + + G +F
Sbjct: 252 MLTQAGFWVCGPEDLMPEEYA-KLFPLKYNRMTTVKGLFAIGDCAGANP-HKFSSGSFTE 309
Query: 361 AELAPRDVVARSIDDQLKKRNEKYVLLDIS---HKPTEKILSH 400
+A + V ++ + + V+ ++ + P E+ + +
Sbjct: 310 GRIAAKAAVRFILEQKPNPEIDDAVVEELKKKAYAPMERFMQY 352
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 163 bits (412), Expect = 9e-46
Identities = 83/342 (24%), Positives = 136/342 (39%), Gaps = 50/342 (14%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL-----CP 133
V+Y D VIG G+AGL A+ + G + V++ S++ AQGG+ A L
Sbjct: 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSD 62
Query: 134 SDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGN-------- 185
D+ + H DT+ + CD + R+ P IREL A G + R G+
Sbjct: 63 GDNEDLHFMDTVKGSDWGCDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQ 122
Query: 186 -------------LHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFA 232
+H GG R + AD TG + A+ + +S+ + A
Sbjct: 123 KTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLFAVANECL-KLGVSIQDRKEA 181
Query: 233 IDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGM 292
I L D C+G ++ T +++ +++K TL+A+GG G IY +TTN +V G G
Sbjct: 182 IA----LIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGT 237
Query: 293 AMAHRAQ-AVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGM- 350
A+A A + NM ++ A E + GG + +
Sbjct: 238 AIALETGIAQLGNMGGIRTDYRGEAKLKGLFSA---GEAACWDMHGFNRLGGNSVSEAVV 294
Query: 351 ------ERFMPLYD-ERAELAPRDVVARSIDDQLKKRNEKYV 385
E F + +L + + ++ K E Y+
Sbjct: 295 AGMIVGEYFAEHCANTQVDLETKTL------EKFVKGQEAYM 330
Score = 51.7 bits (122), Expect = 1e-07
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 421 PVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQ 480
A GG+R +GE ++GL+ AGE AC +HG NRL NS+ EA+V +
Sbjct: 242 ETGIAQLGNMGGIRTDYRGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGE 301
Query: 481 PSIDHKKSTSIDLSA 495
+H +T +DL
Sbjct: 302 YFAEHCANTQVDLET 316
>d1chua3 d.168.1.1 (A:238-353) L-aspartate oxidase {Escherichia coli
[TaxId: 562]}
Length = 116
Score = 132 bits (332), Expect = 3e-37
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 9/124 (7%)
Query: 305 MEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELA 364
+EF QFHPTAL +FL+TEA+RG+G L RFMP +DER ELA
Sbjct: 1 LEFNQFHPTALYHPQAR---------NFLLTEALRGEGAYLKRPDGTRFMPDFDERGELA 51
Query: 365 PRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVP 424
PRD+VAR+ID ++K+ + LDISHKP + I HFP I + L G+D+T +P+P+VP
Sbjct: 52 PRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVP 111
Query: 425 AAHY 428
AAHY
Sbjct: 112 AAHY 115
>d1neka3 d.168.1.1 (A:236-355) Succinate dehydogenase {Escherichia
coli [TaxId: 562]}
Length = 120
Score = 131 bits (330), Expect = 8e-37
Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 305 MEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA-EL 363
ME QFHPT +A G L+TE RG+GG L N ERFM Y A +L
Sbjct: 1 MEMWQFHPTGIAGAG------------VLVTEGCRGEGGYLLNKHGERFMERYAPNAKDL 48
Query: 364 APRDVVARSIDDQLKKRNE------KYVLLDISHKPTEKILSHFPNIAAECLKY-GLDIT 416
A RDVVARSI ++++ + L + H E + S P I + +D
Sbjct: 49 AGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPV 108
Query: 417 SQPIPVVPAAHY 428
+PIPV+P HY
Sbjct: 109 KEPIPVIPTCHY 120
>d1kf6a3 d.168.1.1 (A:226-357) Fumarate reductase {Escherichia coli
[TaxId: 562]}
Length = 132
Score = 117 bits (294), Expect = 1e-31
Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 31/143 (21%)
Query: 305 MEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY------- 357
MEFVQ+HPT L G L+TE RG+GGIL N R++ Y
Sbjct: 1 MEFVQYHPTGLPGSG------------ILMTEGCRGEGGILVNKNGYRYLQDYGMGPETP 48
Query: 358 -----DERAELAPRDVVARSIDDQLKKRNEK------YVLLDISHKPTEKILSHFPNIAA 406
++ EL PRD V+++ + +K N V LD+ H +K+ P I
Sbjct: 49 LGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE 108
Query: 407 ECLKY-GLDITSQPIPVVPAAHY 428
Y G+D +PIPV P AHY
Sbjct: 109 LAKAYVGVDPVKEPIPVRPTAHY 131
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 116 bits (290), Expect = 2e-29
Identities = 61/311 (19%), Positives = 98/311 (31%), Gaps = 40/311 (12%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGG-------VSAVLCPS 134
D V+GSG AG A+ G V +I K N A GG +
Sbjct: 17 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKIT 76
Query: 135 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGH 194
DS E +DT+ G + D V+V+ + D + + A+GA + GG
Sbjct: 77 DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLT-------DVGMMGGA 129
Query: 195 SHHRIVHAADMTGREIE-RALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLN 253
S +R G +L NI + + I++L G
Sbjct: 130 SVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGM-- 187
Query: 254 VETQEVVRFISKVTLLASGGAGHIYP------------STTNPLVATGDGMAMAHRAQAV 301
+ + +LA+GG +TN A GDG+ +A A
Sbjct: 188 --YKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAENAGGA 245
Query: 302 ISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERA 361
+ +M+++ + + I + E G G N +
Sbjct: 246 LKDMQYIDTKAEVMNAKKQVIP------GLYGAGEVTGGVHGA--NRLGGNAISDIITFG 297
Query: 362 ELAPRDVVARS 372
LA + S
Sbjct: 298 RLAGEEAAKYS 308
Score = 57.7 bits (138), Expect = 1e-09
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 440 ETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRA 478
+ + GLY AGEV G+HGANRL N++ + + F R A
Sbjct: 263 KQVIPGLYGAGEVTG-GVHGANRLGGNAISDIITFGRLA 300
>d2bs2a3 d.168.1.1 (A:251-371) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 121
Score = 108 bits (270), Expect = 1e-28
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 20/132 (15%)
Query: 305 MEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMP-LYDERAEL 363
ME VQFHPT L G L+TE RGDGGIL ++ RFMP E+ EL
Sbjct: 1 MEAVQFHPTPLFPSG------------ILLTEGCRGDGGILRDVDGHRFMPDYEPEKKEL 48
Query: 364 APRDVVARSIDDQLKKR------NEKYVLLDISHKPTEKILSHFPNIAAECLKY-GLDIT 416
A RDVV+R + + ++K +++ LDIS + I ++ ++ C + G+D
Sbjct: 49 ASRDVVSRRMIEHIRKGKGVQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPA 108
Query: 417 SQPIPVVPAAHY 428
+ PV+P HY
Sbjct: 109 EKWAPVLPMQHY 120
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 99.3 bits (246), Expect = 2e-23
Identities = 60/286 (20%), Positives = 107/286 (37%), Gaps = 32/286 (11%)
Query: 78 GSVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPS-- 134
G + V+G+G AG +L K G V ++ KA N+ + GG++AV
Sbjct: 15 GPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQT 74
Query: 135 -----DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLA 189
D VE ++D + G D + V ++ + D ++ L ++GA+ D +
Sbjct: 75 AHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGA-- 132
Query: 190 REGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGV 249
H +G EI L +A + + D
Sbjct: 133 ---RVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLV-----VNDDHSVVG 184
Query: 250 DTLNVETQEVVRFISKVTLLASGGAGHIY------------PSTTNPLVATGDGMAMAHR 297
++ + +K +LA+GG G +++N + ATGDG+ MA
Sbjct: 185 AVVHGKHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAKE 244
Query: 298 AQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGG 343
A ++++++VQ A L ++ K + F E G G
Sbjct: 245 IGASMTDIDWVQAAINTTA-SVLDLQ-SKPIDGLFAAGEVTGGVHG 288
Score = 67.3 bits (163), Expect = 1e-12
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 443 VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRA 478
+ GL+ AGEV G+HG NRL N++ + +VF R A
Sbjct: 273 IDGLFAAGEVTG-GVHGYNRLGGNAIADTVVFGRIA 307
>d1chua1 a.7.3.1 (A:423-533) L-aspartate oxidase {Escherichia coli
[TaxId: 562]}
Length = 111
Score = 91.6 bits (227), Expect = 7e-23
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 522 EVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRN 581
EL+ MW YVGIVR+T L+ A RI L+ E + Y + V E+RN
Sbjct: 16 HNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEY-----YAHFRVSNNLLELRN 70
Query: 582 LFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILP 623
L A+L+V A+ R ESRGLH+ +D+P + + P+I+ P
Sbjct: 71 LVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSG-PSILSP 111
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 91.6 bits (226), Expect = 9e-21
Identities = 64/283 (22%), Positives = 91/283 (32%), Gaps = 35/283 (12%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQG-------GVSAVLCPS 134
D +IGSG AGL A+ G V ++ K NT A G A L
Sbjct: 24 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIE 83
Query: 135 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGH 194
D + + DT+ G + D E V+V+ D I L ++GA + R GG
Sbjct: 84 DKKQIMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADMT-------DVGRMGGA 136
Query: 195 SHHRIVHAA--DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTL 252
S +R G + + L + V L GV
Sbjct: 137 SVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED----ASGKVTGVLVK 192
Query: 253 NVETQEVVRFISKVTLLASGGAGHIYP------------STTNPLVATGDGMAMAHRAQA 300
T + ++A+GG TN ATGDG+ +A +A A
Sbjct: 193 GEYT-GYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDVALQAGA 251
Query: 301 VISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGG 343
++E A E K K + E G G
Sbjct: 252 ATRDLEMGGLVIDTKA-EVKSEKTGKPITGLYAAGEVTGGVHG 293
Score = 71.2 bits (173), Expect = 5e-14
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 425 AAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRA 478
+ + GLY AGEV G+HGANRL N++ + + + R A
Sbjct: 260 GLVIDTKAEVKSEKTGKPITGLYAAGEVTG-GVHGANRLGGNAISDIVTYGRIA 312
>d1neka1 a.7.3.1 (A:451-588) Succinate dehydogenase {Escherichia
coli [TaxId: 562]}
Length = 138
Score = 77.5 bits (190), Expect = 1e-17
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 522 EVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEH-GWEQTFVGLEACEMR 580
+RK LQ M + R ++ ++ + + + E +E E+
Sbjct: 8 AIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELD 67
Query: 581 NLFCCAKLVVSSALARHESRGLHYMVDFP 609
NL A SA R ESRG H DFP
Sbjct: 68 NLMETAYATAVSANFRTESRGAHSRFDFP 96
>d1d4ca3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory
fumarate reductase) {Shewanella putrefaciens [TaxId:
24]}
Length = 146
Score = 77.9 bits (191), Expect = 1e-17
Identities = 37/165 (22%), Positives = 57/165 (34%), Gaps = 34/165 (20%)
Query: 307 FVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPR 366
++Q HPT G +ITEAVRG+G I+ N RFM E+ R
Sbjct: 1 YIQAHPTYSPAGG------------VMITEAVRGNGAIVVNREGNRFM------NEITTR 42
Query: 367 DVVARSIDDQLKKRNEKYVLLDISHKPT---------EKILSHFPNIAAECLKYGLDITS 417
D + +I Q K Y++ D S + + I+ I + +
Sbjct: 43 DKASAAILQQ--KGESAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAE 100
Query: 418 QPIPVVPAAHYMCGGVRA----GLQGETNVRGLYVAGEVACTGLH 458
V ++ G A V + A E+A +H
Sbjct: 101 LAKTVTAYNGFVKSGKDAQFERPDLPRELVVAPFYALEIAP-AVH 144
>d1kf6a1 a.7.3.1 (A:443-576) Fumarate reductase {Escherichia coli
[TaxId: 562]}
Length = 134
Score = 76.7 bits (188), Expect = 2e-17
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 522 EVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWE-TYLFEHGWEQTFVGLEACEMR 580
++R E+ M GI R+ +Q ++ EL+ ++ + + L E+
Sbjct: 8 KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELG 67
Query: 581 NLFCCAKLVVSSALARHESRGLHYMVDFPHVEEN 614
+ A+ + SA+AR ESRG H +D E +
Sbjct: 68 HGLNVAECMAHSAMARKESRGAHQRLDEGCTERD 101
>d2bs2a1 a.7.3.1 (A:458-655) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 198
Score = 75.5 bits (185), Expect = 2e-16
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 522 EVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWE-TYLFEHGWEQTFVGLEACEMR 580
+++ ++ +M VGI R L+ A ++EL + + + EA +
Sbjct: 8 KIKNRMKDVMDDNVGIFRDGPHLEKAVKELEELYKKSKNVGIKNKRLHANPELEEAYRVP 67
Query: 581 NLFCCAKLVVSSALARHESRGLHYMVDFPH 610
+ A V AL R ESRG H D+P
Sbjct: 68 MMLKVALCVAKGALDRTESRGAHNREDYPK 97
>d1y0pa3 d.168.1.1 (A:362-504) Flavocytochrome c3 (respiratory
fumarate reductase) {Shewanella frigidimarina [TaxId:
56812]}
Length = 143
Score = 72.9 bits (178), Expect = 6e-16
Identities = 38/164 (23%), Positives = 59/164 (35%), Gaps = 34/164 (20%)
Query: 308 VQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRD 367
+Q HPT G ++TEAVRG+G IL N +RF+ E+ RD
Sbjct: 1 IQAHPTLSVKGG------------VMVTEAVRGNGAILVNREGKRFVN------EITTRD 42
Query: 368 VVARSIDDQLKKRNEKYVLLDISHKPTEKILSH---------FPNIAAECLKYGLDITSQ 418
+ +I Q K Y++ D S + + + ++ G+D +
Sbjct: 43 KASAAILAQTGKSA--YLIFDDSVRKSLSKIDKYIGLGVAPTADSLVKLGKMEGIDGKAL 100
Query: 419 PIPVVPAAHYMCGGVRAGLQGETNVR----GLYVAGEVACTGLH 458
V + G + R G Y A EV G+H
Sbjct: 101 TETVARYNSLVSSGKDTDFERPNLPRALNEGNYYAIEVTP-GVH 143
>d1jnra1 a.7.3.1 (A:503-643) Adenylylsulfate reductase A subunit
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 141
Score = 69.7 bits (170), Expect = 7e-15
Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 3/105 (2%)
Query: 521 KEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAE-WETYLFEHGWEQTFVGLEACEM 579
+ LQ IM Y + + + + L + + A E+
Sbjct: 13 WQGLVRLQKIMDEYAAGIATIYKTNEKMLQRALELLAFLKEDLEKLAARDLHELMRAWEL 72
Query: 580 RNLFCCAKLVVSSALARHESRG--LHYMVDFPHVEENKRLPTIIL 622
+ A+ V L R E+R +Y D+P + + + +
Sbjct: 73 VHRVWTAEAHVRHMLFRKETRWPGYYYRTDYPELNDEEWKCFVCS 117
>d1qo8a3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory
fumarate reductase) {Shewanella frigidimarina [TaxId:
56812]}
Length = 146
Score = 70.1 bits (170), Expect = 8e-15
Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 18/154 (11%)
Query: 311 HPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVA 370
HPT D LI+E VRG G ++ N RF+ R + + +
Sbjct: 1 HPTVGKDSR------------ILISETVRGVGAVMVNKDGNRFISELTTRDKASDAILKQ 48
Query: 371 RSIDDQLKKRNEKYVLL-DISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYM 429
+ N+ Y + ++L + G+ + V Y+
Sbjct: 49 PGQFAWIIFDNQLYKKAKMVRGYDHLEMLYKGDTVEQLAKSTGMKVADLAKTVSDYNGYV 108
Query: 430 CGGVRAGLQGETN----VRGLYVAGEVACTGLHG 459
G + Y A +VA G+H
Sbjct: 109 ASGKDTAFGRADMPLNMTQSPYYAVKVAP-GIHH 141
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 52.0 bits (123), Expect = 7e-08
Identities = 40/263 (15%), Positives = 81/263 (30%), Gaps = 19/263 (7%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTI 145
V+GSGV GL AL +A+ G +V ++ + P + ++ + M T
Sbjct: 11 VLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANW-----TPFMTLTD 65
Query: 146 VAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADM 205
++ T + P + F + EDG L + ++R + +++
Sbjct: 66 GPRQAKWEESTFKKWVELVPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSEC 125
Query: 206 TGREIERALLEAVVSDPNISVFEHHFAIDL--------LTTLDGP-DAVCHGVDTLNVET 256
I V P + L +T+L+ D V+ +
Sbjct: 126 PPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFERRTVTSLEQAFDGADLVVNATGLGA 185
Query: 257 QEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALA 316
+ + + A I T +++ + E H +
Sbjct: 186 KSIAGIDDQARGGPRVEAERIVLPLDR----TKSPLSLGRGSARAAKEKEVTLVHAYGFS 241
Query: 317 DEGLPIKPKKTRENSFLITEAVR 339
G + + L+ EA +
Sbjct: 242 SAGYQQSWGAAEDVAQLVDEAFQ 264
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 46.0 bits (108), Expect = 6e-06
Identities = 35/267 (13%), Positives = 72/267 (26%), Gaps = 45/267 (16%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVES 139
+Y + +IG+G AGL A ++AK G +V V + + GG
Sbjct: 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNF--------- 53
Query: 140 HMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRI 199
+ A + V+ + + + +
Sbjct: 54 TNLEVTPAHYLSQNPHFVKSALARYTNWDF--------ISLVAEQGITYHEKELGQLFCD 105
Query: 200 VHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEV 259
A + +L++ + + + + V + + +
Sbjct: 106 EGAEQI------VEMLKSECDKYGAKILLRSEVSQ-VERIQNDEKVRFVLQVNSTQ---- 154
Query: 260 VRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEG 319
+ K ++A+GG P AT G +A + + T +
Sbjct: 155 --WQCKNLIVATGGLS--MPGLG----ATPFGYQIAEQFGIPV----IPPRAVTMGGVDT 202
Query: 320 LPIKPK----KTRENSFLITEAVRGDG 342
I K + I E + G
Sbjct: 203 KVISSKTMESNQVSGLYFIGEVLDVTG 229
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 41.3 bits (95), Expect = 2e-04
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNYAQGGVSA 129
++++ VIG G+ G A +AK A+ T+ A G + A
Sbjct: 3 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGA 52
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 40.8 bits (94), Expect = 2e-04
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAV 130
+D VIG G +GL A+ A+ G V ++ K + GG V
Sbjct: 3 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNV 51
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 40.1 bits (92), Expect = 5e-04
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP-HESNTNYAQGGVSAVLCPSDSVESH 140
FD V+G+G G+ ++AK G ++ +P H + +++ +
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVP 63
Query: 141 MQ 142
+
Sbjct: 64 LA 65
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 35.5 bits (80), Expect = 0.013
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQG 125
FD +IG G GL A E AK V V+ P TN+ G
Sbjct: 4 FDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTNWGLG 47
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 35.3 bits (80), Expect = 0.014
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 115
K++D+ IG G G+ A +G A+I E
Sbjct: 1 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKEL 36
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 35.2 bits (79), Expect = 0.019
Identities = 6/33 (18%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 114
+D V+G+G+ + ++ +G V + +
Sbjct: 7 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNP 39
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 34.8 bits (79), Expect = 0.025
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKA 113
+D+ ++GSG+ G A E+ K V VI K
Sbjct: 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKR 33
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 34.6 bits (78), Expect = 0.026
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQ 124
+ FD VIG+G G A++ A+ G A+I K + E T
Sbjct: 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGG 46
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 34.1 bits (77), Expect = 0.038
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEP 115
K D +IG G AG A++ A+ G A + K
Sbjct: 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 34.0 bits (76), Expect = 0.042
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAE 114
+D V+G+G+ + ++ G V I K +
Sbjct: 6 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 38
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 33.9 bits (76), Expect = 0.045
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 115
+D VIG G G+ A A+H VA++ K+
Sbjct: 2 YDLIVIGGGSGGMAAARRAARHNAKVALVEKSRL 35
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 34.0 bits (76), Expect = 0.045
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 84 DFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHES--NTNYAQGGVSA 129
+IG+G+ G A E+ G + V+ + + +T++A G V
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQ 52
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 33.7 bits (76), Expect = 0.046
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 115
+D V+G G G A A G VA++ + +
Sbjct: 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 33.4 bits (75), Expect = 0.066
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTN 121
+ +D VIG+G GL A VAVI + H
Sbjct: 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHY 44
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 32.5 bits (73), Expect = 0.090
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 5/97 (5%)
Query: 78 GSVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDS 136
G+ K+ ++GSG AG A+ A+ +IT E T + +
Sbjct: 1 GTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLT 60
Query: 137 VESHMQDTIV----AGAYLCDDETVRVVCTEGPDRIR 169
M+ + D +V P R+
Sbjct: 61 GPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLN 97
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 32.6 bits (73), Expect = 0.098
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 80 VKYFDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEPHESNTNY 122
V +D+ VIG G GL A A+ G AV+ + + N
Sbjct: 1 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNV 44
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 32.5 bits (73), Expect = 0.12
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITKAEP 115
D +IG G G A++ A+ G I K
Sbjct: 4 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA 37
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 32.5 bits (73), Expect = 0.12
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKAE-PHESNTNYAQGGVSAVLCPSDSVESHMQDT 144
VIG+GV GL AL + + +V + + T + V+A L + E
Sbjct: 5 VIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSNPQE 64
Query: 145 IVAGAYLCDDETVRVVCTEGPD 166
+ + +
Sbjct: 65 ANWNQQTFNYLLSHIGSPNAAN 86
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 32.3 bits (72), Expect = 0.15
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPH 116
K FD VIG+G GL A A VAVI H
Sbjct: 2 KIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVH 39
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 32.2 bits (72), Expect = 0.17
Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 27/162 (16%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTI 145
+IG+G +GL + K G ++ + P +Y G + A + V+ + +
Sbjct: 7 IIGAGPSGLLLGQLLHKAGIDNVILERQTP-----DYVLGRIRAGVLEQGMVDLLREAGV 61
Query: 146 VAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADM 205
R+ + + G S + V
Sbjct: 62 D-------------------RRMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQ 102
Query: 206 TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCH 247
E+ R L+EA + +V++ + P
Sbjct: 103 --TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFE 142
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 31.5 bits (70), Expect = 0.20
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-VAVITK 112
+IG G G A+ + G ++
Sbjct: 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG 36
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 31.7 bits (71), Expect = 0.25
Identities = 7/29 (24%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKAE 114
++G+G +G ++A+ G V +I + +
Sbjct: 7 IVGAGFSGAVIGRQLAEKGHQVHIIDQRD 35
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 31.2 bits (69), Expect = 0.33
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 114
D + G+G+ GL AL + + G V ++ +
Sbjct: 2 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 35
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 31.1 bits (69), Expect = 0.33
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHGT-VAVITKAE 114
+ +D IG G AG + + G ++ +
Sbjct: 41 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 75
Score = 29.5 bits (65), Expect = 0.99
Identities = 9/52 (17%), Positives = 15/52 (28%), Gaps = 5/52 (9%)
Query: 427 HYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRA 478
G V +T+V +Y G++ G + AR
Sbjct: 207 LGPKGEVLVNEYLQTSVPNVYAVGDLI-----GGPMEMFKARKSGCYAARNV 253
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 30.9 bits (68), Expect = 0.44
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKAE 114
++G+G+AGL A +A G V V+ +E
Sbjct: 35 IVGAGMAGLSAAYVLAGAGHQVTVLEASE 63
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 30.6 bits (68), Expect = 0.46
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEP 115
+ V+G+G G A+ A+ G V ++ K
Sbjct: 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNL 37
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 30.7 bits (67), Expect = 0.48
Identities = 6/30 (20%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 87 VIGSGVAGLCYALEVAKHG--TVAVITKAE 114
V+G+G++G+ A +++ G + ++ +
Sbjct: 5 VVGAGMSGISAAKRLSEAGITDLLILEATD 34
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 30.9 bits (68), Expect = 0.51
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKAE 114
V+G G++GL A + G ++ +
Sbjct: 5 VVGGGISGLAVAHHLRSRGTDAVLLESSA 33
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 30.6 bits (68), Expect = 0.52
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG--TVAVITKAE 114
D V+G+G AGL A E++K+ VA+I ++
Sbjct: 34 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 30.7 bits (68), Expect = 0.54
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVI 110
+D ++GSG G YA E+ G VA+
Sbjct: 5 YDVVIVGSGPIGCTYARELVGAGYKVAMF 33
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 30.6 bits (67), Expect = 0.55
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKAE 114
VIG+GV+GL A ++ HG V V
Sbjct: 6 VIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 30.5 bits (67), Expect = 0.67
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 84 DFSVIGSGVAGLCYALEVAKHG-TVAVI 110
D V+G G++G+ A + G V V+
Sbjct: 1 DVVVVGGGISGMAAAKLLHDSGLNVVVL 28
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 29.9 bits (65), Expect = 0.92
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 87 VIGSGVAGLCYALEVAKHG 105
+IGSGV+GL A ++ G
Sbjct: 10 IIGSGVSGLAAARQLQSFG 28
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 29.9 bits (66), Expect = 0.99
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGTVAVI 110
+D+ ++G G +G A +++ V V+
Sbjct: 27 YDYVIVGGGTSGCPLAATLSEKYKVLVL 54
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 29.5 bits (65), Expect = 1.5
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 76 RDGSVKYFDFSVIGSGVAGLCYALEVAKHG--TVAVITKAEPHESNTN 121
+D S + D+ + G G+ GL A + ++ +V VI ++ +ES+
Sbjct: 11 KDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVI-ESGSYESDRG 57
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 29.3 bits (64), Expect = 1.5
Identities = 48/386 (12%), Positives = 99/386 (25%), Gaps = 55/386 (14%)
Query: 265 KVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKP 324
+V L G G + VA D + + + + LA+ G+P P
Sbjct: 2 RVLLSVCGTRGDV-----EIGVALADRLKALGVQTRMCAPPAAEER----LAEVGVPHVP 52
Query: 325 KKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKY 384
V ++ GM P ++R ++ ++ +
Sbjct: 53 -------------VGLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVV 99
Query: 385 VLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVR 444
+ D+ + AE L + + + H G T++R
Sbjct: 100 AVGDL-------AAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIR 152
Query: 445 GLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVV 504
L+ E N + H + + + V
Sbjct: 153 VLW---EERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDV 209
Query: 505 P-KSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEA-EWETYL 562
G ++ + E+ L + S++ A+ +EA +
Sbjct: 210 DAVQTGAWLLSDERPLPPELEAFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269
Query: 563 FEHGWEQTFVGLEA----------CEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVE 612
T + L + LF V+ A E V
Sbjct: 270 VILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVAAVIHHGSAGTEHVATRAGV------ 323
Query: 613 ENKRLPTIILPSLVNCTWSSRQLHKL 638
P +++P + + + ++ L
Sbjct: 324 -----PQLVIPRNTDQPYFAGRVAAL 344
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 87 VIGSGVAGLCYALEVAKHG-TVAVITKA 113
V+G ++GL AL + G V V ++
Sbjct: 9 VVGGSISGLTAALMLRDAGVDVDVYERS 36
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 28.3 bits (62), Expect = 3.4
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 75 LRDGSVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVI 110
L DG VIGSG G AL + + G ++
Sbjct: 2 LADGD--RVPALVIGSGYGGAVAALRLTQAGIPTQIV 36
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 27.8 bits (60), Expect = 3.4
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 87 VIGSGVAGLCYALEVAKHGTVAV 109
++G+G A + A +A+ G +
Sbjct: 9 LLGAGPASISCASFLARLGYSDI 31
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas
putida [TaxId: 303]}
Length = 133
Score = 27.2 bits (59), Expect = 3.8
Identities = 24/124 (19%), Positives = 36/124 (29%), Gaps = 5/124 (4%)
Query: 57 SPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPH 116
+ N++ LRT+ C+R + VIG G GL A K +
Sbjct: 10 VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 69
Query: 117 ESNTNYAQ--GGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRE---L 171
A L V+ + D + V V E R+ +
Sbjct: 70 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVI 129
Query: 172 IAIG 175
IG
Sbjct: 130 AGIG 133
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 27.5 bits (59), Expect = 3.9
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 87 VIGSGVAGLCYALEVAKHGTVAVITKAEPHE 117
V+G G G A + +T EP+
Sbjct: 7 VVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37
>d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1
domain {Green algae (Chlamydomonas reinhardtii) [TaxId:
3055]}
Length = 109
Score = 26.7 bits (58), Expect = 4.0
Identities = 5/27 (18%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 329 ENSFLITEAVRGDGGILY-NLGMERFM 354
++F++ +A D ++Y + G
Sbjct: 3 RHTFVVADATLPDCPLVYASEGFYAMT 29
>d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain,
lov2 {Maidenhair fern (Adiantum capillus-veneris)
[TaxId: 13818]}
Length = 104
Score = 26.4 bits (57), Expect = 4.0
Identities = 6/25 (24%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 331 SFLITEAVRGDGGILY-NLGMERFM 354
SF+IT+ D I++ +
Sbjct: 2 SFVITDPRLPDNPIIFASDRFLELT 26
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 27.9 bits (61), Expect = 4.2
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 7/39 (17%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHGT-------VAVITKAE 114
D ++G+G AGL A + + V ++ KA
Sbjct: 33 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 71
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 27.7 bits (60), Expect = 4.5
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTN 121
+D+ ++G+G G+ A +++ G V ++ + P T
Sbjct: 3 YDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTG 42
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 27.3 bits (59), Expect = 5.9
Identities = 5/28 (17%), Positives = 9/28 (32%)
Query: 87 VIGSGVAGLCYALEVAKHGTVAVITKAE 114
++GSG + A + K
Sbjct: 7 IVGSGPSAFFAAASLLKAADTTEDLDMA 34
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 27.0 bits (58), Expect = 6.3
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNY 122
+D ++GSG AG A+ A+ G ++ + +
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTV 42
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 26.9 bits (59), Expect = 6.5
Identities = 8/31 (25%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG-TVAVITK 112
+ ++G+G +G A +A+ G V ++T+
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQ 33
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 27.2 bits (59), Expect = 6.6
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 81 KYFDFSVIGSGVAGLCYALEVAKHG--TVAVI 110
K +D+ + G G+ GL A ++ ++ V VI
Sbjct: 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVI 54
>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar
hydrolase), N-terminal domain {Candida albicans [TaxId:
5476]}
Length = 322
Score = 27.0 bits (59), Expect = 7.0
Identities = 24/115 (20%), Positives = 32/115 (27%), Gaps = 37/115 (32%)
Query: 163 EGPDRIRELIAIGASFDRGEDGNLH--LARE---------GGHSHHRIVHAAD------M 205
D I + S + GE +H L + GGHSH R D
Sbjct: 192 HEVDLIIIVGHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFDSLSTGLQ 251
Query: 206 TGREIE------------------RALLEAVVSDPNISVFEHHFAIDLLTTLDGP 242
+GR E R D N F++H +D D
Sbjct: 252 SGRYCETVGWTSVNLDKADLNLPVRQRFSRSYIDFNTDSFKYHTNLDK--EFDTA 304
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 26.8 bits (58), Expect = 7.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 83 FDFSVIGSGVAGLCYALEVAKHG 105
D ++G+G +GL A +AK+
Sbjct: 51 SDVIIVGAGSSGLSAAYVIAKNR 73
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase,
middle domain {Escherichia coli [TaxId: 562]}
Length = 179
Score = 26.3 bits (57), Expect = 9.0
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 87 VIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIV 146
V+G+G AGL +A+ A G + A + +++ + + V
Sbjct: 48 VVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEV 107
Query: 147 AGAYLCDDETVRVVCTEGPDRIRELIAIGAS 177
G L + TV + D ++A G
Sbjct: 108 TGVTLKLNHTVTADQLQAFDET--ILASGIP 136
>d1wd3a1 b.29.1.21 (A:19-337) Alpha-L-arabinofuranosidase B,
N-terminal domain {Aspergillus kawachii [TaxId: 40384]}
Length = 319
Score = 26.7 bits (59), Expect = 10.0
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 119 NTNYAQG----GVSAVLCPSDSVESHMQDTIVAGAY 150
N+N AQG GV PSD E+ +Q+ IVA Y
Sbjct: 280 NSNGAQGTFYEGVMTSGYPSDDTENSVQENIVAAKY 315
>d2cwqa1 a.152.1.4 (A:1-117) Hypothetical protein TTHA0727 {Thermus
thermophilus [TaxId: 274]}
Length = 117
Score = 25.6 bits (56), Expect = 10.0
Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 7/55 (12%)
Query: 165 PDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVV 219
++ R LI +G + G + + + ++ + L A
Sbjct: 53 DEKTRTLILLGIALATGSEACV-------KAMAHRAKRLGLSKEALLETLKIARQ 100
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.409
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,396,218
Number of extensions: 111533
Number of successful extensions: 470
Number of sequences better than 10.0: 1
Number of HSP's gapped: 421
Number of HSP's successfully gapped: 95
Length of query: 641
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 550
Effective length of database: 1,158,166
Effective search space: 636991300
Effective search space used: 636991300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)