Query 006538
Match_columns 641
No_of_seqs 341 out of 4034
Neff 10.8
Searched_HMMs 13730
Date Tue Mar 26 19:11:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006538.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_2163-2167//hhsearch_scop/006538hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z7xw1 c.10.1.1 (W:1-460) Rib 100.0 1.2E-30 8.4E-35 166.3 38.9 413 75-585 2-459 (460)
2 d1z7xw1 c.10.1.1 (W:1-460) Rib 100.0 1.3E-30 9.3E-35 166.1 39.0 417 50-561 2-459 (460)
3 d2astb2 c.10.1.3 (B:2136-2419) 100.0 6.1E-32 4.5E-36 172.7 21.1 205 366-586 47-255 (284)
4 d2astb2 c.10.1.3 (B:2136-2419) 100.0 3E-30 2.2E-34 164.3 24.7 205 221-444 46-252 (284)
5 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.9 1.4E-22 1E-26 125.9 24.4 147 414-567 157-313 (344)
6 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.9 1.6E-21 1.1E-25 120.6 26.5 206 311-540 91-313 (344)
7 d2omza2 c.10.2.1 (A:33-416) In 99.9 4.8E-22 3.5E-26 123.2 9.8 53 76-134 45-98 (384)
8 d2omza2 c.10.2.1 (A:33-416) In 99.8 8.3E-21 6E-25 117.0 13.2 77 49-134 43-120 (384)
9 d1xkua_ c.10.2.7 (A:) Decorin 99.7 1.7E-17 1.3E-21 100.4 3.5 13 244-256 53-65 (305)
10 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 1.1E-17 8.1E-22 101.4 0.2 11 245-255 55-65 (284)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 2.6E-17 1.9E-21 99.5 0.7 12 555-566 224-235 (284)
12 d1xkua_ c.10.2.7 (A:) Decorin 99.6 1.9E-16 1.4E-20 95.3 4.9 12 245-256 78-89 (305)
13 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.4E-15 1E-19 90.8 6.6 33 527-564 193-225 (227)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.7E-15 1.9E-19 89.5 7.9 33 527-564 176-208 (210)
15 d2omxa2 c.10.2.1 (A:37-235) In 99.5 3.7E-15 2.7E-19 88.7 6.4 12 528-539 171-182 (199)
16 d1p9ag_ c.10.2.7 (G:) von Will 99.5 1.6E-16 1.2E-20 95.6 -0.9 11 556-566 195-205 (266)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 2E-14 1.4E-18 85.1 6.7 122 386-537 103-225 (227)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 4.5E-14 3.3E-18 83.3 8.3 121 388-537 88-208 (210)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.4 3.4E-14 2.5E-18 83.9 5.3 13 493-505 170-182 (199)
20 d1p9ag_ c.10.2.7 (G:) von Will 99.4 4.6E-15 3.4E-19 88.3 0.8 11 245-255 54-64 (266)
21 d1ogqa_ c.10.2.8 (A:) Polygala 99.4 2.2E-16 1.6E-20 94.9 -9.7 12 494-505 267-278 (313)
22 d1ogqa_ c.10.2.8 (A:) Polygala 99.4 6.9E-16 5E-20 92.4 -8.2 13 413-425 266-278 (313)
23 d1jl5a_ c.10.2.6 (A:) Leucine 99.3 2.3E-13 1.7E-17 79.8 3.7 34 51-89 39-72 (353)
24 d1pgva_ c.10.1.1 (A:) Tropomod 99.3 1.2E-11 9E-16 71.1 12.3 121 439-566 13-141 (167)
25 d1io0a_ c.10.1.1 (A:) Tropomod 99.3 9.5E-11 6.9E-15 66.7 13.8 120 440-566 16-142 (166)
26 d1jl5a_ c.10.2.6 (A:) Leucine 99.2 5.6E-11 4.1E-15 67.8 11.3 52 469-540 284-335 (353)
27 d1pgva_ c.10.1.1 (A:) Tropomod 99.2 3.7E-10 2.7E-14 63.7 14.6 64 469-538 72-140 (167)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.2 1.2E-11 8.9E-16 71.2 6.3 13 493-505 110-122 (162)
29 d1io0a_ c.10.1.1 (A:) Tropomod 99.1 2E-09 1.5E-13 60.1 15.5 64 469-538 74-141 (166)
30 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 4.9E-14 3.5E-18 83.2 -8.3 13 493-505 199-211 (242)
31 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 2.7E-14 2E-18 84.4 -9.6 13 244-256 51-63 (242)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 4.2E-12 3.1E-16 73.5 1.0 36 388-426 46-81 (198)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 9E-12 6.6E-16 71.8 -1.2 11 415-425 48-58 (198)
34 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.0 3.9E-12 2.8E-16 73.6 -4.7 35 389-424 101-135 (192)
35 d1dcea3 c.10.2.2 (A:444-567) R 98.9 2.2E-10 1.6E-14 64.9 1.6 13 493-505 88-100 (124)
36 d1nexb1 a.158.1.1 (B:270-369) 98.9 1.4E-10 1E-14 65.9 0.5 51 9-59 4-54 (100)
37 d1dcea3 c.10.2.2 (A:444-567) R 98.9 4.5E-10 3.3E-14 63.3 3.1 16 412-427 40-55 (124)
38 d1fs1a1 a.158.1.1 (A:109-149) 98.8 1.5E-09 1.1E-13 60.7 3.3 36 11-46 1-36 (41)
39 d2ovrb1 a.158.1.1 (B:2263-2364 98.7 2.9E-09 2.1E-13 59.2 2.8 39 8-46 16-54 (102)
40 d1p22a1 a.158.1.1 (A:135-252) 98.5 2E-08 1.5E-12 55.1 2.0 46 9-55 9-58 (118)
41 d2ifga3 c.10.2.7 (A:36-191) Hi 98.3 1.9E-07 1.4E-11 50.1 3.3 14 412-425 53-66 (156)
42 d2ifga3 c.10.2.7 (A:36-191) Hi 98.2 3.5E-07 2.6E-11 48.8 2.9 62 366-428 32-93 (156)
43 d1koha1 c.10.2.3 (A:201-362) m 97.8 4.6E-06 3.3E-10 43.3 3.4 11 440-450 64-74 (162)
44 d1wh4a_ a.77.1.2 (A:) Interleu 52.3 3.4 0.00025 13.9 4.1 40 1-49 8-47 (127)
No 1
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.2e-30 Score=166.33 Aligned_cols=413 Identities=22% Similarity=0.279 Sum_probs=183.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHC--CCCCEECCCCCCCCCHHHHHHH---HHCCCCCCEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 99507996338999389983211--5536030467888617999999---721988766754665322586444443999
Q 006538 75 PYLRSLKVDCGKLDDSAIELMLR--PTLHELCLHNCADFSGKLLSEI---GGKCKDLRSLYLGSVAEKRGRSIHISDLEE 149 (641)
Q Consensus 75 ~~L~~L~L~~~~~~~~~~~~~~~--~~L~~L~L~~~~~~~~~~l~~~---~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 149 (641)
++|++|+++++++++..+..+.. +++++|+|.+|. +++.++..+ .+.+++|++|+++++ .+++.++..
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N------~i~~~~~~~ 74 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSN------ELGDVGVHC 74 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTC------CCHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCC-CCHHHHHHHHHHHHCCCCCCEEECCCC------CCCHHHHHH
T ss_conf 9877798208958868999999767799999828999-988999999999853999888979598------597289999
Q ss_pred HHHC----CCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 9823----984341312433232231136998764137779676246575767522299988999998768997888618
Q 006538 150 LLNG----CPQLEALILMFDISLFLRHNFARVWALASEKLTSLEIGYISSVMVTELLSPNVEPHQSPNQIRPSILPGIQK 225 (641)
Q Consensus 150 ~~~~----~~~L~~L~L~~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 225 (641)
+... ..+|++|++..+ .+.+.+...+.. . +..+++|++
T Consensus 75 l~~~l~~~~~~L~~L~L~~n--~it~~~~~~l~~---------------------~---------------l~~~~~L~~ 116 (460)
T d1z7xw1 75 VLQGLQTPSCKIQKLSLQNC--CLTGAGCGVLSS---------------------T---------------LRTLPTLQE 116 (460)
T ss_dssp HHHTTCSTTCCCCEEECTTS--CCBGGGHHHHHH---------------------H---------------TTSCTTCCE
T ss_pred HHHHHHCCCCCCCEEECCCC--CCCCCCCCCCCC---------------------H---------------HHCCCCCCC
T ss_conf 99998437887788778887--754322101211---------------------0---------------000343200
Q ss_pred EEEECCCCCHHHHHHHHHCCC----CCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 884215789789999994299----9748845899987885445555477786323999738981022111112342248
Q 006538 226 LCLSVDYITDAMVGTISQGLV----SLTHLDLRDAPLIEPRITFDLTNSGLQQINQHGKLKHLSLIRSQEFLITYFRRVN 301 (641)
Q Consensus 226 L~L~~~~~~~~~~~~~~~~~~----~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 301 (641)
|+++.+.+++.....+..... .......... .... ..
T Consensus 117 L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~------------------------------~~ 157 (460)
T d1z7xw1 117 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYC---------SLSA------------------------------AS 157 (460)
T ss_dssp EECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS---------CCBG------------------------------GG
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC---------CCCH------------------------------HH
T ss_conf 24443320234555544301355433322222232---------2200------------------------------11
Q ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH----HHHCCCCCEEEECCCCCCCHHH--HHHHHHCCCCCCEEECCCC
Q ss_conf 368999997099864899459777898899999----9839995299815889999999--9999841999978981568
Q 006538 302 DLGILLMADKCASMESICLGGFCRVTDTGFKTI----LHSCSNLYKLRVSHGTQLTDLV--FHDISATSLSLTHVCLRWC 375 (641)
Q Consensus 302 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l----~~~~~~L~~L~l~~~~~l~~~~--~~~~~~~~~~L~~L~l~~~ 375 (641)
...........+.++.+.++++ .....+.... .........+.+..+....... ........+.++.+.+.++
T Consensus 158 ~~~~~~~l~~~~~~~~~~ls~~-~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n 236 (460)
T d1z7xw1 158 CEPLASVLRAKPDFKELTVSNN-DINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN 236 (460)
T ss_dssp HHHHHHHHHHCTTCCEEECCSS-BCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSS
T ss_pred HCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHC
T ss_conf 0011222333322222332222-124555543234332112210012411245421011012233222222100100211
Q ss_pred CCCCHHHHHH-----HHCCCCCCEEECCCCCCCCHHHHH----HHHCCCCCCEEECCCCCCCHHHHHHHHHH---CCCCC
Q ss_conf 8887889998-----026999899946899888926657----53089897599836876786999999985---18886
Q 006538 376 NLLTNHAIKS-----LASNTGIKVLDLRDCKNLGDEALR----AISSLPQLKILLLDGSDISDVGVSYLRLT---VITSL 443 (641)
Q Consensus 376 ~~l~~~~~~~-----l~~~~~L~~L~l~~~~~~~~~~~~----~l~~~~~L~~L~l~~~~l~~~~~~~l~~~---~~~~L 443 (641)
.+.+.+... ......++.+++++| .+...... .+...+.++.++++++.+++.++..+... ..+.|
T Consensus 237 -~~~~~~~~~~~~~~~~~~~~l~~l~l~~n-~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L 314 (460)
T d1z7xw1 237 -KLGDVGMAELCPGLLHPSSRLRTLWIWEC-GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 314 (460)
T ss_dssp -BCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred -CCCCCCCCHHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
T ss_conf -22334420110001111111000013454-3321233433221112343334444433322456421110123334443
Q ss_pred CEEECCCCCCCCHHHHHHHH---CCCCCCCCCEEECCCCCCCCHHHHHHHHH----CCCCCCEEECCCCCCCCHHHHHHH
Q ss_conf 48845788888878999974---14898980289369999999788999981----699987883169998798999999
Q 006538 444 VKLSLRGCKRLTDKCISALF---DGTSKLQLQELDLSNLPHLSDNGILTLAT----CRVPISELRVRQCPLIGDTSVIAL 516 (641)
Q Consensus 444 ~~L~l~~c~~l~~~~~~~l~---~~~~~~~L~~L~l~~~~~i~~~~~~~l~~----~~~~L~~L~l~~~~~l~~~~~~~l 516 (641)
+.+.+++|. +++.+...+. ..+ ++|++|++++ +.+++.++..+++ ..+.|++|++++| .+++.++..+
T Consensus 315 ~~l~l~~~~-l~~~~~~~l~~~~~~~--~~L~~L~Ls~-N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l 389 (460)
T d1z7xw1 315 ESLWVKSCS-FTAACCSHFSSVLAQN--RFLLELQISN-NRLEDAGVRELCQGLGQPGSVLRVLWLADC-DVSDSSCSSL 389 (460)
T ss_dssp CEEECTTSC-CBGGGHHHHHHHHHHC--SSCCEEECCS-SBCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHH
T ss_pred CCCCCCCCC-HHHHHHHHCCCCCCCC--CCHHHHHEEE-ECCCCCCCCHHHHHHHCCCCCCCEEECCCC-CCCHHHHHHH
T ss_conf 333233341-0233443213322110--1111320121-013576640011122045677788989799-7975999999
Q ss_pred HHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHC---CCCCCCEEEEECCCC-C---HHHHHHHHHHCCCEEEE
Q ss_conf 802345766679986489526899999999999638---799982099820778-9---88999999519980870
Q 006538 517 ASMLVDDDRWYGSSIRLLDLYNCGGITQLAFRWLKK---PYFPRLRWLGVTGSV-N---RDILDALARSRPFLNVA 585 (641)
Q Consensus 517 ~~~~~~~~~~~~~~L~~L~l~~c~~~~~~~~~~l~~---~~~~~L~~L~l~~~~-~---~~~~~~~~~~~~~l~~~ 585 (641)
+..+. .+++|++|+++++. +++.++..+.. .....|+.|.+.++. . .+.++.+....|.+++.
T Consensus 390 ~~~l~-----~~~~L~~L~Ls~N~-i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~~~~~l~~~ 459 (460)
T d1z7xw1 390 AATLL-----ANHSLRELDLSNNC-LGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459 (460)
T ss_dssp HHHHH-----HCCCCCEEECCSSS-CCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHH-----CCCCCCEEECCCCC-CCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 99996-----29988989899996-987999999999974788667898989878989999999999759998995
No 2
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.3e-30 Score=166.13 Aligned_cols=417 Identities=19% Similarity=0.218 Sum_probs=225.7
Q ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHH----C-CCCCEECCCCCCCCCHHHHHHHHHC--
Q ss_conf 00122334688889443401289999950799633899938998321----1-5536030467888617999999721--
Q 006538 50 SFLTSFHLLDIALSTEIIKPLLPPNPYLRSLKVDCGKLDDSAIELML----R-PTLHELCLHNCADFSGKLLSEIGGK-- 122 (641)
Q Consensus 50 ~~l~~l~l~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~~~----~-~~L~~L~L~~~~~~~~~~l~~~~~~-- 122 (641)
..++.++++...+....+...+..+++++.|+|+.+.+++.+...++ . ++|+.|+++++. +++.++..+...
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE-LGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCC-CCHHHHHHHHHHHH
T ss_conf 98777982089588689999997677999998289999889999999998539998889795985-97289999999984
Q ss_pred --CCCCCEEECCCCCCCCCCCCCHHHHH---HHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHH
Q ss_conf --98876675466532258644444399---9982398434131243323223113699876413777967624657576
Q 006538 123 --CKDLRSLYLGSVAEKRGRSIHISDLE---ELLNGCPQLEALILMFDISLFLRHNFARVWALASEKLTSLEIGYISSVM 197 (641)
Q Consensus 123 --~~~L~~L~l~~~~~~~~~~~~~~~l~---~~~~~~~~L~~L~L~~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~ 197 (641)
..+|++|++++| .+++.++. ..+..+++|+.|++.. ..+.+.++..+.......
T Consensus 81 ~~~~~L~~L~L~~n------~it~~~~~~l~~~l~~~~~L~~L~L~~--N~i~~~~~~~l~~~l~~~------------- 139 (460)
T d1z7xw1 81 TPSCKIQKLSLQNC------CLTGAGCGVLSSTLRTLPTLQELHLSD--NLLGDAGLQLLCEGLLDP------------- 139 (460)
T ss_dssp STTCCCCEEECTTS------CCBGGGHHHHHHHTTSCTTCCEEECCS--SBCHHHHHHHHHHHHTST-------------
T ss_pred CCCCCCCEEECCCC------CCCCCCCCCCCCHHHCCCCCCCCCCCC--CCCHHHHHHHHHHCCCCC-------------
T ss_conf 37887788778887------754322101211000034320024443--320234555544301355-------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH---HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 75222999889999987689978886188842157897---899999942999748845899987885445555477786
Q 006538 198 VTELLSPNVEPHQSPNQIRPSILPGIQKLCLSVDYITD---AMVGTISQGLVSLTHLDLRDAPLIEPRITFDLTNSGLQQ 274 (641)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~---~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~ 274 (641)
................ ..........+.++.+.++++ ...+.++..
T Consensus 140 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~---------~~~~~~~~~ 188 (460)
T d1z7xw1 140 ----------------------QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNN---------DINEAGVRV 188 (460)
T ss_dssp ----------------------TCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSS---------BCHHHHHHH
T ss_pred ----------------------CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC---------CCCCCCCCC
T ss_conf ----------------------4333222222322200110011222333322222332222---------124555543
Q ss_pred H----H-CCCCCCEEEECCCCCCCCCCCCCCCHHH---HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
Q ss_conf 3----2-3999738981022111112342248368---999997099864899459777898899999983999529981
Q 006538 275 I----N-QHGKLKHLSLIRSQEFLITYFRRVNDLG---ILLMADKCASMESICLGGFCRVTDTGFKTILHSCSNLYKLRV 346 (641)
Q Consensus 275 l----~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l 346 (641)
+ . .......+.+. .......+ ........+.++.+.+.++ .+...+....
T Consensus 189 ~~~~l~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n-~~~~~~~~~~------------ 246 (460)
T d1z7xw1 189 LCQGLKDSPCQLEALKLE---------SCGVTSDNCRDLCGIVASKASLRELALGSN-KLGDVGMAEL------------ 246 (460)
T ss_dssp HHHHHHHSCCCCCEEECT---------TSCCBTTHHHHHHHHHHHCTTCCEEECCSS-BCHHHHHHHH------------
T ss_pred CCCCCCCCCCCCCCCCCC---------CCCCCCHHHHCCCCCCCCCCCCCCCCHHHC-CCCCCCCCHH------------
T ss_conf 234332112210012411---------245421011012233222222100100211-2233442011------------
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHH----HHHCCCCCCEEECCCCCCCCHHHHHHHH-----CCCCC
Q ss_conf 58899999999999841999978981568888788999----8026999899946899888926657530-----89897
Q 006538 347 SHGTQLTDLVFHDISATSLSLTHVCLRWCNLLTNHAIK----SLASNTGIKVLDLRDCKNLGDEALRAIS-----SLPQL 417 (641)
Q Consensus 347 ~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~----~l~~~~~L~~L~l~~~~~~~~~~~~~l~-----~~~~L 417 (641)
..........++.++++++ .+...... .+...+.++.++++++ .+++.++..+. ....|
T Consensus 247 ----------~~~~~~~~~~l~~l~l~~n-~i~~~~~~~~~~~l~~~~~l~~l~l~~n-~i~~~~~~~l~~~l~~~~~~L 314 (460)
T d1z7xw1 247 ----------CPGLLHPSSRLRTLWIWEC-GITAKGCGDLCRVLRAKESLKELSLAGN-ELGDEGARLLCETLLEPGCQL 314 (460)
T ss_dssp ----------HHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCTTCCEEECTTC-CCHHHHHHHHHHHHTSTTCCC
T ss_pred ----------HCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHCCCCCCCCCC
T ss_conf ----------0001111111000013454-3321233433221112343334444433-322456421110123334443
Q ss_pred CEEECCCCCCCHHHHHHHHH--HCCCCCCEEECCCCCCCCHHHHHHHHCCC--CCCCCCEEECCCCCCCCHHHHHHHH--
Q ss_conf 59983687678699999998--51888648845788888878999974148--9898028936999999978899998--
Q 006538 418 KILLLDGSDISDVGVSYLRL--TVITSLVKLSLRGCKRLTDKCISALFDGT--SKLQLQELDLSNLPHLSDNGILTLA-- 491 (641)
Q Consensus 418 ~~L~l~~~~l~~~~~~~l~~--~~~~~L~~L~l~~c~~l~~~~~~~l~~~~--~~~~L~~L~l~~~~~i~~~~~~~l~-- 491 (641)
+.+.++++.+++.++..+.. ...++|++|+++++ .+++.++..++... ..+.|++|++++| .+++.++..++
T Consensus 315 ~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l~~~ 392 (460)
T d1z7xw1 315 ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNN-RLEDAGVRELCQGLGQPGSVLRVLWLADC-DVSDSSCSSLAAT 392 (460)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSS-BCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHEEEE-CCCCCCCCHHHHHHHCCCCCCCEEECCCC-CCCHHHHHHHHHH
T ss_conf 333233341023344321332211011113201210-13576640011122045677788989799-7975999999999
Q ss_pred -HCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHC--CCCCCCEEE
Q ss_conf -1699987883169998798999999802345766679986489526899999999999638--799982099
Q 006538 492 -TCRVPISELRVRQCPLIGDTSVIALASMLVDDDRWYGSSIRLLDLYNCGGITQLAFRWLKK--PYFPRLRWL 561 (641)
Q Consensus 492 -~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~~~~~~~~~~l~~--~~~~~L~~L 561 (641)
..+++|++|++++| .+++.++..+...+.. ....|+.|++.++. +.......+.. ...|+|+.|
T Consensus 393 l~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~----~~~~L~~l~l~~~~-~~~~~~~~l~~l~~~~~~l~~~ 459 (460)
T d1z7xw1 393 LLANHSLRELDLSNN-CLGDAGILQLVESVRQ----PGCLLEQLVLYDIY-WSEEMEDRLQALEKDKPSLRVI 459 (460)
T ss_dssp HHHCCCCCEEECCSS-SCCHHHHHHHHHHHTS----TTCCCCEEECTTCC-CCHHHHHHHHHHHHHCTTSEEE
T ss_pred HHCCCCCCEEECCCC-CCCHHHHHHHHHHHHH----CCCCCCEEECCCCC-CCHHHHHHHHHHHHHCCCCEEE
T ss_conf 962998898989999-6987999999999974----78866789898987-8989999999999759998995
No 3
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.1e-32 Score=172.73 Aligned_cols=205 Identities=20% Similarity=0.293 Sum_probs=115.3
Q ss_pred CCCEEECCCCCCCCHHHHHH-HHCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCC-CCCHHHHHHHHHHCCCCC
Q ss_conf 99789815688887889998-0269998999468998889266575308989759983687-678699999998518886
Q 006538 366 SLTHVCLRWCNLLTNHAIKS-LASNTGIKVLDLRDCKNLGDEALRAISSLPQLKILLLDGS-DISDVGVSYLRLTVITSL 443 (641)
Q Consensus 366 ~L~~L~l~~~~~l~~~~~~~-l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~l~~~~~~~l~~~~~~~L 443 (641)
+|++|++++| .++...+.. +..+++|++|++++| .+++..+..++++++|+.|++++| .+++.++..+.. .+++|
T Consensus 47 ~L~~LdLs~~-~i~~~~l~~l~~~c~~L~~L~L~~~-~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~-~~~~L 123 (284)
T d2astb2 47 RVQHMDLSNS-VIEVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS-SCSRL 123 (284)
T ss_dssp CCCEEECTTC-EECHHHHHHHHTTBCCCSEEECTTC-BCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH-HCTTC
T ss_pred CCCEEECCCC-CCCHHHHHHHHHHCCCCCCCCCCCC-CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHC
T ss_conf 7887889898-4577799999974877651452346-7986789998518997571510013412355403657-88743
Q ss_pred CEEECCCCCCCCHHHHHHHHC-CCCCCCCCEEECCCC-CCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCC
Q ss_conf 488457888888789999741-489898028936999-999978899998169998788316999879899999980234
Q 006538 444 VKLSLRGCKRLTDKCISALFD-GTSKLQLQELDLSNL-PHLSDNGILTLATCRVPISELRVRQCPLIGDTSVIALASMLV 521 (641)
Q Consensus 444 ~~L~l~~c~~l~~~~~~~l~~-~~~~~~L~~L~l~~~-~~i~~~~~~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~ 521 (641)
++|++++|..+++.++..... .+ ++|+.|++++| ..+++.++..++..||+|++|++++|..+++.++..+.
T Consensus 124 ~~L~ls~c~~~~~~~~~~~~~~~~--~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~---- 197 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQVAVAHVS--ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF---- 197 (284)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSC--TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG----
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCC--CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC----
T ss_conf 565224533233322000100011--11101221355424444434342323222123553223477830333321----
Q ss_pred CCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEC
Q ss_conf 57666799864895268999999999996387999820998207789889999995199808702
Q 006538 522 DDDRWYGSSIRLLDLYNCGGITQLAFRWLKKPYFPRLRWLGVTGSVNRDILDALARSRPFLNVAC 586 (641)
Q Consensus 522 ~~~~~~~~~L~~L~l~~c~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~~~ 586 (641)
.+++|++|++++|..+++.++..+.. +|+|+.|++.+|..+..+..+...+|.+++.+
T Consensus 198 -----~~~~L~~L~L~~C~~i~~~~l~~L~~--~~~L~~L~l~~~~~d~~l~~l~~~lp~L~i~~ 255 (284)
T d2astb2 198 -----QLNYLQHLSLSRCYDIIPETLLELGE--IPTLKTLQVFGIVPDGTLQLLKEALPHLQINC 255 (284)
T ss_dssp -----GCTTCCEEECTTCTTCCGGGGGGGGG--CTTCCEEECTTSSCTTCHHHHHHHSTTSEESC
T ss_pred -----CCCCCCEEECCCCCCCCHHHHHHHHC--CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
T ss_conf -----35768779899999787378999726--99989896448889899999997684366168
No 4
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.98 E-value=3e-30 Score=164.29 Aligned_cols=205 Identities=18% Similarity=0.245 Sum_probs=97.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 88618884215789789999994299974884589998788544555547778632399973898102211111234224
Q 006538 221 PGIQKLCLSVDYITDAMVGTISQGLVSLTHLDLRDAPLIEPRITFDLTNSGLQQINQHGKLKHLSLIRSQEFLITYFRRV 300 (641)
Q Consensus 221 ~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~~~~~~~ 300 (641)
.+|++|+++.+.+++..+..+...+++|++|++.+| .+++..+..++.+++|++|+++ +|..+
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~---------~l~~~~~~~l~~~~~L~~L~Ls--------~c~~i 108 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL---------RLSDPIVNTLAKNSNLVRLNLS--------GCSGF 108 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC---------BCCHHHHHHHTTCTTCSEEECT--------TCBSC
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCC---------CCCCHHHHHHHCCCCCCCCCCC--------CCCCC
T ss_conf 878878898984577799999974877651452346---------7986789998518997571510--------01341
Q ss_pred CHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHH-HCCCCCEEEECCCC-CCCHHHHHHHHHCCCCCCEEECCCCCCC
Q ss_conf 836899999709986489945977789889999998-39995299815889-9999999999841999978981568888
Q 006538 301 NDLGILLMADKCASMESICLGGFCRVTDTGFKTILH-SCSNLYKLRVSHGT-QLTDLVFHDISATSLSLTHVCLRWCNLL 378 (641)
Q Consensus 301 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~-~~~~L~~L~l~~~~-~l~~~~~~~~~~~~~~L~~L~l~~~~~l 378 (641)
++.++..+...+++|++|++++|..+++.++..... .+++|+.|.++++. .+++..+..+...+++|++|++++|..+
T Consensus 109 td~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~i 188 (284)
T d2astb2 109 SEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 188 (284)
T ss_dssp CHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23554036578874356522453323332200010001111101221355424444434342323222123553223477
Q ss_pred CHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 788999802699989994689988892665753089897599836876786999999985188864
Q 006538 379 TNHAIKSLASNTGIKVLDLRDCKNLGDEALRAISSLPQLKILLLDGSDISDVGVSYLRLTVITSLV 444 (641)
Q Consensus 379 ~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~~L~ 444 (641)
++.++..+..+++|++|++++|..+++.++..++++|+|+.|++.++ +++.++..+.. .+|+|+
T Consensus 189 td~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~-~lp~L~ 252 (284)
T d2astb2 189 KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKE-ALPHLQ 252 (284)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHH-HSTTSE
T ss_pred CCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEEEECC-CCHHHHHHHHH-HCCCCC
T ss_conf 83033332135768779899999787378999726999898964488-89899999997-684366
No 5
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.92 E-value=1.4e-22 Score=125.91 Aligned_cols=147 Identities=20% Similarity=0.258 Sum_probs=83.1
Q ss_pred CCCCCEEECCCCCCCHHHHHHHHH--HCCCCCCEEECCCCCCCCHHHHHHH-HCC-CCCCCCCEEECCCCCCCCHHHHHH
Q ss_conf 989759983687678699999998--5188864884578888887899997-414-898980289369999999788999
Q 006538 414 LPQLKILLLDGSDISDVGVSYLRL--TVITSLVKLSLRGCKRLTDKCISAL-FDG-TSKLQLQELDLSNLPHLSDNGILT 489 (641)
Q Consensus 414 ~~~L~~L~l~~~~l~~~~~~~l~~--~~~~~L~~L~l~~c~~l~~~~~~~l-~~~-~~~~~L~~L~l~~~~~i~~~~~~~ 489 (641)
.+.|+.+.++++.+++.++..+.. ..++.|+.|++++|. +++.++..+ ... ...++|+.|++++ +.+++.+...
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~-N~i~~~g~~~ 234 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQD-NTFTHLGSSA 234 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCS-SCCHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC-CCCCCCCCCHHHHHCCHHHHCCCCCCC-CCCCCCCCCC
T ss_conf 76421110136501355433221111233321335433322-222223200243321101211222333-3222222223
Q ss_pred HH---HCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHC---CCCCCCEEEEE
Q ss_conf 98---1699987883169998798999999802345766679986489526899999999999638---79998209982
Q 006538 490 LA---TCRVPISELRVRQCPLIGDTSVIALASMLVDDDRWYGSSIRLLDLYNCGGITQLAFRWLKK---PYFPRLRWLGV 563 (641)
Q Consensus 490 l~---~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~~~~~~~~~~l~~---~~~~~L~~L~l 563 (641)
++ ..+++|++|++++| .+++.+...++.++... ..+.|++|++++|. ++..++..+.. ..+++|+.|++
T Consensus 235 L~~~l~~~~~L~~L~Ls~n-~i~~~g~~~l~~~l~~~---~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l 309 (344)
T d2ca6a1 235 LAIALKSWPNLRELGLNDC-LLSARGAAAVVDAFSKL---ENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLEL 309 (344)
T ss_dssp HHHHGGGCTTCCEEECTTC-CCCHHHHHHHHHHHHTC---SSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEEC
T ss_pred CCCCCCCCCCCHHHHHHCC-CCCCHHHHHHHHHHHHC---CCCCCCEEECCCCC-CCHHHHHHHHHHHHCCCCCCCEEEC
T ss_conf 4443323221111030047-56715667888776315---68888989898986-9808999999999703899998978
Q ss_pred CCCC
Q ss_conf 0778
Q 006538 564 TGSV 567 (641)
Q Consensus 564 ~~~~ 567 (641)
++|.
T Consensus 310 ~~N~ 313 (344)
T d2ca6a1 310 NGNR 313 (344)
T ss_dssp TTSB
T ss_pred CCCC
T ss_conf 7980
No 6
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.91 E-value=1.6e-21 Score=120.64 Aligned_cols=206 Identities=19% Similarity=0.202 Sum_probs=86.5
Q ss_pred HCCCCCEEEECCCCCCCHH---HHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHH-HHH
Q ss_conf 0998648994597778988---999999839995299815889999999999984199997898156888878899-980
Q 006538 311 KCASMESICLGGFCRVTDT---GFKTILHSCSNLYKLRVSHGTQLTDLVFHDISATSLSLTHVCLRWCNLLTNHAI-KSL 386 (641)
Q Consensus 311 ~~~~L~~L~l~~~~~~~~~---~~~~l~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~-~~l 386 (641)
.+++|+.|++++| .++.. .+...+..+++|++|++++| .+.......+.... ..... ...
T Consensus 91 ~~~~L~~L~L~~n-~i~~~~~~~l~~~l~~~~~L~~L~l~~n-~l~~~~~~~l~~~l--------------~~~~~~~~~ 154 (344)
T d2ca6a1 91 KCPKLHTVRLSDN-AFGPTAQEPLIDFLSKHTPLEHLYLHNN-GLGPQAGAKIARAL--------------QELAVNKKA 154 (344)
T ss_dssp TCTTCCEEECCSC-CCCTTTHHHHHHHHHHCTTCCEEECCSS-CCHHHHHHHHHHHH--------------HHHHHHHHH
T ss_pred HCCCCCCCCCCCC-CCCCCCCCCHHHHHCCCCCCHHEECCCC-CCCCCCCCCCCCCC--------------CCCCCCCCC
T ss_conf 4777563300001-3455433310111002343210000024-66665431111212--------------222110001
Q ss_pred HCCCCCCEEECCCCCCCCHHHHHHH----HCCCCCCEEECCCCCCCHHHHHHHHH---HCCCCCCEEECCCCCCCCHHHH
Q ss_conf 2699989994689988892665753----08989759983687678699999998---5188864884578888887899
Q 006538 387 ASNTGIKVLDLRDCKNLGDEALRAI----SSLPQLKILLLDGSDISDVGVSYLRL---TVITSLVKLSLRGCKRLTDKCI 459 (641)
Q Consensus 387 ~~~~~L~~L~l~~~~~~~~~~~~~l----~~~~~L~~L~l~~~~l~~~~~~~l~~---~~~~~L~~L~l~~c~~l~~~~~ 459 (641)
...+.|+.+.++++ .+++.+...+ ..+++|+.|+++.|.+++.++..+.. ..+++|+.|+++++. +++.+.
T Consensus 155 ~~~~~L~~l~l~~n-~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~-i~~~g~ 232 (344)
T d2ca6a1 155 KNAPPLRSIICGRN-RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGS 232 (344)
T ss_dssp HTCCCCCEEECCSS-CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSC-CHHHHH
T ss_pred CCCCCCCEEECCCC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCC-CCCCCC
T ss_conf 46764211101365-0135543322111123332133543332222222320024332110121122233332-222222
Q ss_pred HHHHCC-CCCCCCCEEECCCCCCCCHHHHHHHHHC-----CCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCE
Q ss_conf 997414-8989802893699999997889999816-----9998788316999879899999980234576667998648
Q 006538 460 SALFDG-TSKLQLQELDLSNLPHLSDNGILTLATC-----RVPISELRVRQCPLIGDTSVIALASMLVDDDRWYGSSIRL 533 (641)
Q Consensus 460 ~~l~~~-~~~~~L~~L~l~~~~~i~~~~~~~l~~~-----~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~L~~ 533 (641)
..++.. ..+++|++|++++| .+++.++..++.. .+.|++|++++| .+++.++..+...+.. .++.|++
T Consensus 233 ~~L~~~l~~~~~L~~L~Ls~n-~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N-~i~~~~~~~l~~~l~~----~~~~L~~ 306 (344)
T d2ca6a1 233 SALAIALKSWPNLRELGLNDC-LLSARGAAAVVDAFSKLENIGLQTLRLQYN-EIELDAVRTLKTVIDE----KMPDLLF 306 (344)
T ss_dssp HHHHHHGGGCTTCCEEECTTC-CCCHHHHHHHHHHHHTCSSCCCCEEECCSS-CCBHHHHHHHHHHHHH----HCTTCCE
T ss_pred CCCCCCCCCCCCCHHHHHHCC-CCCCHHHHHHHHHHHHCCCCCCCEEECCCC-CCCHHHHHHHHHHHHC----CCCCCCE
T ss_conf 234443323221111030047-567156678887763156888898989898-6980899999999970----3899998
Q ss_pred EECCCCC
Q ss_conf 9526899
Q 006538 534 LDLYNCG 540 (641)
Q Consensus 534 L~l~~c~ 540 (641)
|+++++.
T Consensus 307 L~l~~N~ 313 (344)
T d2ca6a1 307 LELNGNR 313 (344)
T ss_dssp EECTTSB
T ss_pred EECCCCC
T ss_conf 9787980
No 7
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.86 E-value=4.8e-22 Score=123.24 Aligned_cols=53 Identities=11% Similarity=0.133 Sum_probs=20.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHC-CCCCEECCCCCCCCCHHHHHHHHHCCCCCCEEECCCC
Q ss_conf 9507996338999389983211-5536030467888617999999721988766754665
Q 006538 76 YLRSLKVDCGKLDDSAIELMLR-PTLHELCLHNCADFSGKLLSEIGGKCKDLRSLYLGSV 134 (641)
Q Consensus 76 ~L~~L~L~~~~~~~~~~~~~~~-~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 134 (641)
++++|+++.+.+++ +..+.. ++|++|+++++. ++.. .. ++.+++|++|+++++
T Consensus 45 ~l~~L~l~~~~I~~--l~gl~~L~nL~~L~Ls~N~-l~~l--~~-l~~L~~L~~L~L~~n 98 (384)
T d2omza2 45 QVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQ-LTDI--TP-LKNLTKLVDILMNNN 98 (384)
T ss_dssp TCCEEECCSSCCCC--CTTGGGCTTCCEEECCSSC-CCCC--GG-GTTCTTCCEEECCSS
T ss_pred CCCEEECCCCCCCC--CCCCCCCCCCCEEECCCCC-CCCC--CC-CCCCCCCCCCCCCCC
T ss_conf 87899899989877--6242458999989681881-7988--63-347711010301343
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.85 E-value=8.3e-21 Score=117.03 Aligned_cols=77 Identities=14% Similarity=0.175 Sum_probs=42.9
Q ss_pred HCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHC-CCCCEECCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 5001223346888894434012899999507996338999389983211-553603046788861799999972198876
Q 006538 49 LSFLTSFHLLDIALSTEIIKPLLPPNPYLRSLKVDCGKLDDSAIELMLR-PTLHELCLHNCADFSGKLLSEIGGKCKDLR 127 (641)
Q Consensus 49 ~~~l~~l~l~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~-~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~ 127 (641)
...++.++++++.+.. +. -+..+++|++|+++++.+++.. .+.. ++|+.|+++++. +.. +.. ...+++|+
T Consensus 43 l~~l~~L~l~~~~I~~--l~-gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~-i~~--i~~-l~~l~~L~ 113 (384)
T d2omza2 43 LDQVTTLQADRLGIKS--ID-GVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQ-IAD--ITP-LANLTNLT 113 (384)
T ss_dssp HTTCCEEECCSSCCCC--CT-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSC-CCC--CGG-GTTCTTCC
T ss_pred HCCCCEEECCCCCCCC--CC-CCCCCCCCCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCC-CCC--CCC-CCCCCCCC
T ss_conf 5787899899989877--62-4245899998968188179886--33477110103013433-322--221-11233433
Q ss_pred EEECCCC
Q ss_conf 6754665
Q 006538 128 SLYLGSV 134 (641)
Q Consensus 128 ~L~l~~~ 134 (641)
.|++.++
T Consensus 114 ~L~~~~~ 120 (384)
T d2omza2 114 GLTLFNN 120 (384)
T ss_dssp EEECCSS
T ss_pred CCCCCCC
T ss_conf 3443322
No 9
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.65 E-value=1.7e-17 Score=100.41 Aligned_cols=13 Identities=31% Similarity=0.276 Sum_probs=5.3
Q ss_pred CCCCCCEEECCCC
Q ss_conf 2999748845899
Q 006538 244 GLVSLTHLDLRDA 256 (641)
Q Consensus 244 ~~~~L~~L~l~~~ 256 (641)
.+++|++|+++++
T Consensus 53 ~l~~L~~L~l~~n 65 (305)
T d1xkua_ 53 NLKNLHTLILINN 65 (305)
T ss_dssp TCTTCCEEECCSS
T ss_pred CCCCCCCCCCCCC
T ss_conf 4656523112344
No 10
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.1e-17 Score=101.38 Aligned_cols=11 Identities=36% Similarity=0.172 Sum_probs=4.2
Q ss_pred CCCCCEEECCC
Q ss_conf 99974884589
Q 006538 245 LVSLTHLDLRD 255 (641)
Q Consensus 245 ~~~L~~L~l~~ 255 (641)
+++|++|++++
T Consensus 55 l~~L~~L~ls~ 65 (284)
T d1ozna_ 55 CRNLTILWLHS 65 (284)
T ss_dssp CTTCCEEECCS
T ss_pred CCCCCCCCCCC
T ss_conf 42130000134
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=2.6e-17 Score=99.55 Aligned_cols=12 Identities=17% Similarity=0.456 Sum_probs=4.8
Q ss_pred CCCCEEEEECCC
Q ss_conf 998209982077
Q 006538 555 FPRLRWLGVTGS 566 (641)
Q Consensus 555 ~~~L~~L~l~~~ 566 (641)
+++|++|++++|
T Consensus 224 ~~~L~~L~l~~N 235 (284)
T d1ozna_ 224 LRALQYLRLNDN 235 (284)
T ss_dssp CTTCCEEECCSS
T ss_pred CCCCCEEEECCC
T ss_conf 465688981199
No 12
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.61 E-value=1.9e-16 Score=95.25 Aligned_cols=12 Identities=42% Similarity=0.479 Sum_probs=4.5
Q ss_pred CCCCCEEECCCC
Q ss_conf 999748845899
Q 006538 245 LVSLTHLDLRDA 256 (641)
Q Consensus 245 ~~~L~~L~l~~~ 256 (641)
+++|+.|++++|
T Consensus 78 l~~L~~L~l~~n 89 (305)
T d1xkua_ 78 LVKLERLYLSKN 89 (305)
T ss_dssp CTTCCEEECCSS
T ss_pred CCCCCEECCCCC
T ss_conf 985578315687
No 13
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=1.4e-15 Score=90.82 Aligned_cols=33 Identities=18% Similarity=0.079 Sum_probs=12.8
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEC
Q ss_conf 79986489526899999999999638799982099820
Q 006538 527 YGSSIRLLDLYNCGGITQLAFRWLKKPYFPRLRWLGVT 564 (641)
Q Consensus 527 ~~~~L~~L~l~~c~~~~~~~~~~l~~~~~~~L~~L~l~ 564 (641)
.+++|++|++++|. +++. ..+.. +++|+.|+++
T Consensus 193 ~l~~L~~L~Ls~N~-lt~i--~~l~~--l~~L~~L~ls 225 (227)
T d1h6ua2 193 SLPNLIEVHLKNNQ-ISDV--SPLAN--TSNLFIVTLT 225 (227)
T ss_dssp GCTTCCEEECTTSC-CCBC--GGGTT--CTTCCEEEEE
T ss_pred CCCCCCEEECCCCC-CCCC--CCCCC--CCCCCEEEEE
T ss_conf 79999989795996-8998--02036--9998989712
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=2.7e-15 Score=89.46 Aligned_cols=33 Identities=21% Similarity=0.133 Sum_probs=12.5
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEC
Q ss_conf 79986489526899999999999638799982099820
Q 006538 527 YGSSIRLLDLYNCGGITQLAFRWLKKPYFPRLRWLGVT 564 (641)
Q Consensus 527 ~~~~L~~L~l~~c~~~~~~~~~~l~~~~~~~L~~L~l~ 564 (641)
.+++|++|++++|. +++ +..+.. +++|++|+++
T Consensus 176 ~l~~L~~L~Ls~N~-i~~--l~~l~~--l~~L~~L~Ls 208 (210)
T d1h6ta2 176 GLTKLQNLYLSKNH-ISD--LRALAG--LKNLDVLELF 208 (210)
T ss_dssp TCTTCCEEECCSSC-CCB--CGGGTT--CTTCSEEEEE
T ss_pred CCCCCCEEECCCCC-CCC--CHHHCC--CCCCCEEECC
T ss_conf 78989999897998-998--721169--9998999711
No 15
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.54 E-value=3.7e-15 Score=88.73 Aligned_cols=12 Identities=17% Similarity=0.232 Sum_probs=4.7
Q ss_pred CCCCCEEECCCC
Q ss_conf 998648952689
Q 006538 528 GSSIRLLDLYNC 539 (641)
Q Consensus 528 ~~~L~~L~l~~c 539 (641)
+++|++|++++|
T Consensus 171 l~~L~~L~ls~N 182 (199)
T d2omxa2 171 LTTLERLDISSN 182 (199)
T ss_dssp CTTCCEEECCSS
T ss_pred CCCCCEEECCCC
T ss_conf 998999978799
No 16
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.6e-16 Score=95.61 Aligned_cols=11 Identities=18% Similarity=0.184 Sum_probs=4.4
Q ss_pred CCCEEEEECCC
Q ss_conf 98209982077
Q 006538 556 PRLRWLGVTGS 566 (641)
Q Consensus 556 ~~L~~L~l~~~ 566 (641)
++|+.|.+.+|
T Consensus 195 ~~L~~L~L~~N 205 (266)
T d1p9ag_ 195 HLLPFAFLHGN 205 (266)
T ss_dssp CCCSEEECCSC
T ss_pred CCCCEEEECCC
T ss_conf 88999983699
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.49 E-value=2e-14 Score=85.13 Aligned_cols=122 Identities=25% Similarity=0.344 Sum_probs=48.5
Q ss_pred HHCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCH-HHHHHHHC
Q ss_conf 02699989994689988892665753089897599836876786999999985188864884578888887-89999741
Q 006538 386 LASNTGIKVLDLRDCKNLGDEALRAISSLPQLKILLLDGSDISDVGVSYLRLTVITSLVKLSLRGCKRLTD-KCISALFD 464 (641)
Q Consensus 386 l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~~L~~L~l~~c~~l~~-~~~~~l~~ 464 (641)
+..+++|+.+.++++.. .. ...+...+.++.+.++++.+.... .+. .+++|+.|.+++|. +++ ..+..
T Consensus 103 l~~l~~L~~l~l~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~~~--~~~--~~~~L~~L~l~~n~-~~~~~~l~~--- 171 (227)
T d1h6ua2 103 IAGLQSIKTLDLTSTQI-TD--VTPLAGLSNLQVLYLDLNQITNIS--PLA--GLTNLQYLSIGNAQ-VSDLTPLAN--- 171 (227)
T ss_dssp GTTCTTCCEEECTTSCC-CC--CGGGTTCTTCCEEECCSSCCCCCG--GGG--GCTTCCEEECCSSC-CCCCGGGTT---
T ss_pred CCCCCCCCCCCCCCCCC-CC--CCHHCCCCCHHHHHCHHHHHCHHH--HHC--CCCCCCCCCCCCCC-CCCCHHHCC---
T ss_conf 22222221221222443-31--100000230122200000000000--001--02111002333333-331001056---
Q ss_pred CCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECC
Q ss_conf 4898980289369999999788999981699987883169998798999999802345766679986489526
Q 006538 465 GTSKLQLQELDLSNLPHLSDNGILTLATCRVPISELRVRQCPLIGDTSVIALASMLVDDDRWYGSSIRLLDLY 537 (641)
Q Consensus 465 ~~~~~~L~~L~l~~~~~i~~~~~~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~L~~L~l~ 537 (641)
+ ++|+.|+++++ .+++... ...+++|++|++++| .+++... +. .+++|+.|+++
T Consensus 172 -l--~~L~~L~Ls~n-~l~~l~~---l~~l~~L~~L~Ls~N-~lt~i~~--l~---------~l~~L~~L~ls 225 (227)
T d1h6ua2 172 -L--SKLTTLKADDN-KISDISP---LASLPNLIEVHLKNN-QISDVSP--LA---------NTSNLFIVTLT 225 (227)
T ss_dssp -C--TTCCEEECCSS-CCCCCGG---GGGCTTCCEEECTTS-CCCBCGG--GT---------TCTTCCEEEEE
T ss_pred -C--CCCEECCCCCC-CCCCCHH---HCCCCCCCEEECCCC-CCCCCCC--CC---------CCCCCCEEEEE
T ss_conf -4--63356445888-4177853---447999998979599-6899802--03---------69998989712
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.49 E-value=4.5e-14 Score=83.34 Aligned_cols=121 Identities=26% Similarity=0.313 Sum_probs=46.5
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHCCCC
Q ss_conf 69998999468998889266575308989759983687678699999998518886488457888888789999741489
Q 006538 388 SNTGIKVLDLRDCKNLGDEALRAISSLPQLKILLLDGSDISDVGVSYLRLTVITSLVKLSLRGCKRLTDKCISALFDGTS 467 (641)
Q Consensus 388 ~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~~L~~L~l~~c~~l~~~~~~~l~~~~~ 467 (641)
.+++|+.|++++| .++. +..+..+++|+.+++.++.+... ..+. .++.++.+.++++. +++... ...+
T Consensus 88 ~l~~L~~L~l~~n-~i~~--l~~l~~l~~L~~L~l~~~~~~~~--~~l~--~l~~l~~l~~~~n~-l~~~~~---~~~l- 155 (210)
T d1h6ta2 88 NLKNLGWLFLDEN-KVKD--LSSLKDLKKLKSLSLEHNGISDI--NGLV--HLPQLESLYLGNNK-ITDITV---LSRL- 155 (210)
T ss_dssp TCTTCCEEECCSS-CCCC--GGGGTTCTTCCEEECTTSCCCCC--GGGG--GCTTCCEEECCSSC-CCCCGG---GGGC-
T ss_pred CCCCCCCCCCCCC-CCCC--CCCCCCCCCCCCCCCCCCCCCCC--CCCC--CCCCCCCCCCCCCC-CCCCCC---CCCC-
T ss_conf 5862120143333-3212--22121222111223456532211--2201--11112221122233-345431---0001-
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECC
Q ss_conf 8980289369999999788999981699987883169998798999999802345766679986489526
Q 006538 468 KLQLQELDLSNLPHLSDNGILTLATCRVPISELRVRQCPLIGDTSVIALASMLVDDDRWYGSSIRLLDLY 537 (641)
Q Consensus 468 ~~~L~~L~l~~~~~i~~~~~~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~L~~L~l~ 537 (641)
++|+.++++++ .+++.. . ...+++|+.|++++| .+++. ..+. .+++|++|+++
T Consensus 156 -~~L~~l~l~~n-~l~~i~--~-l~~l~~L~~L~Ls~N-~i~~l--~~l~---------~l~~L~~L~Ls 208 (210)
T d1h6ta2 156 -TKLDTLSLEDN-QISDIV--P-LAGLTKLQNLYLSKN-HISDL--RALA---------GLKNLDVLELF 208 (210)
T ss_dssp -TTCSEEECCSS-CCCCCG--G-GTTCTTCCEEECCSS-CCCBC--GGGT---------TCTTCSEEEEE
T ss_pred -CCCCCCCCCCC-CCCCCC--C-CCCCCCCCEEECCCC-CCCCC--HHHC---------CCCCCCEEECC
T ss_conf -33210013464-302564--5-367898999989799-89987--2116---------99998999711
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.45 E-value=3.4e-14 Score=83.93 Aligned_cols=13 Identities=8% Similarity=0.118 Sum_probs=5.6
Q ss_pred CCCCCCEEECCCC
Q ss_conf 6999878831699
Q 006538 493 CRVPISELRVRQC 505 (641)
Q Consensus 493 ~~~~L~~L~l~~~ 505 (641)
.+++|++|++++|
T Consensus 170 ~l~~L~~L~ls~N 182 (199)
T d2omxa2 170 NLTTLERLDISSN 182 (199)
T ss_dssp TCTTCCEEECCSS
T ss_pred CCCCCCEEECCCC
T ss_conf 7998999978799
No 20
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=4.6e-15 Score=88.27 Aligned_cols=11 Identities=36% Similarity=0.519 Sum_probs=3.6
Q ss_pred CCCCCEEECCC
Q ss_conf 99974884589
Q 006538 245 LVSLTHLDLRD 255 (641)
Q Consensus 245 ~~~L~~L~l~~ 255 (641)
+++|++|++++
T Consensus 54 l~~L~~L~L~~ 64 (266)
T d1p9ag_ 54 YTRLTQLNLDR 64 (266)
T ss_dssp CTTCCEEECTT
T ss_pred CCCCCCCCCCC
T ss_conf 56552213566
No 21
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.38 E-value=2.2e-16 Score=94.91 Aligned_cols=12 Identities=17% Similarity=-0.047 Sum_probs=4.2
Q ss_pred CCCCCEEECCCC
Q ss_conf 999878831699
Q 006538 494 RVPISELRVRQC 505 (641)
Q Consensus 494 ~~~L~~L~l~~~ 505 (641)
+++|++|++++|
T Consensus 267 L~~L~~L~Ls~N 278 (313)
T d1ogqa_ 267 LKFLHSLNVSFN 278 (313)
T ss_dssp CTTCCEEECCSS
T ss_pred CCCCCEEECCCC
T ss_conf 999998979588
No 22
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.36 E-value=6.9e-16 Score=92.42 Aligned_cols=13 Identities=23% Similarity=0.074 Sum_probs=4.1
Q ss_pred CCCCCCEEECCCC
Q ss_conf 8989759983687
Q 006538 413 SLPQLKILLLDGS 425 (641)
Q Consensus 413 ~~~~L~~L~l~~~ 425 (641)
++++|+.|++++|
T Consensus 266 ~L~~L~~L~Ls~N 278 (313)
T d1ogqa_ 266 QLKFLHSLNVSFN 278 (313)
T ss_dssp GCTTCCEEECCSS
T ss_pred CCCCCCEEECCCC
T ss_conf 7999998979588
No 23
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.34 E-value=2.3e-13 Score=79.78 Aligned_cols=34 Identities=26% Similarity=0.440 Sum_probs=13.9
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCH
Q ss_conf 012233468888944340128999995079963389993
Q 006538 51 FLTSFHLLDIALSTEIIKPLLPPNPYLRSLKVDCGKLDD 89 (641)
Q Consensus 51 ~l~~l~l~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 89 (641)
.++.++++.+.++. ++. ..++|++|+++++.+++
T Consensus 39 ~l~~LdLs~~~L~~--lp~---~~~~L~~L~Ls~N~l~~ 72 (353)
T d1jl5a_ 39 QAHELELNNLGLSS--LPE---LPPHLESLVASCNSLTE 72 (353)
T ss_dssp TCSEEECTTSCCSC--CCS---CCTTCSEEECCSSCCSS
T ss_pred CCCEEEECCCCCCC--CCC---CCCCCCEEECCCCCCCC
T ss_conf 99899937999887--889---87898889899997963
No 24
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.33 E-value=1.2e-11 Score=71.13 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=50.6
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHCC-CCCCCCCEEECCCCCCCCHHHHHHHHH---CCCCCCEEECCCCCCCCHHHHH
Q ss_conf 188864884578888887899997414-898980289369999999788999981---6999878831699987989999
Q 006538 439 VITSLVKLSLRGCKRLTDKCISALFDG-TSKLQLQELDLSNLPHLSDNGILTLAT---CRVPISELRVRQCPLIGDTSVI 514 (641)
Q Consensus 439 ~~~~L~~L~l~~c~~l~~~~~~~l~~~-~~~~~L~~L~l~~~~~i~~~~~~~l~~---~~~~L~~L~l~~~~~l~~~~~~ 514 (641)
..++|++|+++++..+++.++..++.. ...+.|++|++++ +.+++.++..++. ..+.|++|++++| .+++.|..
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~-n~l~~~~~~~la~~L~~n~~L~~L~L~~n-~i~~~g~~ 90 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLAN-TAISDSEARGLIELIETSPSLRVLNVESN-FLTPELLA 90 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTT-SCCBHHHHTTHHHHHHHCSSCCEEECCSS-BCCHHHHH
T ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCC-CCCCHHHHHHHHHHHHHCCCCCCEEEEHH-HCCHHHHH
T ss_conf 89998197827999989899999999976377645401201-56215679887531000234330033010-21459999
Q ss_pred HHHHCCCCCCCCCCCCCCEEECCCCC--CCCHHHHHHHHC--CCCCCCEEEEECCC
Q ss_conf 99802345766679986489526899--999999999638--79998209982077
Q 006538 515 ALASMLVDDDRWYGSSIRLLDLYNCG--GITQLAFRWLKK--PYFPRLRWLGVTGS 566 (641)
Q Consensus 515 ~l~~~~~~~~~~~~~~L~~L~l~~c~--~~~~~~~~~l~~--~~~~~L~~L~l~~~ 566 (641)
.++.++. .+++|++|+++++. .+.+.+...+.. ...++|+.|++..+
T Consensus 91 ~l~~aL~-----~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 91 RLLRSTL-----VTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHTT-----TTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHH-----HCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 9999998-----48938987788776888657999999999972998538648688
No 25
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.27 E-value=9.5e-11 Score=66.70 Aligned_cols=120 Identities=14% Similarity=0.137 Sum_probs=47.7
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHCC-CCCCCCCEEECCCCCCCCHHHHHHHHH---CCCCCCEEECCCCCCCCHHHHHH
Q ss_conf 88864884578888887899997414-898980289369999999788999981---69998788316999879899999
Q 006538 440 ITSLVKLSLRGCKRLTDKCISALFDG-TSKLQLQELDLSNLPHLSDNGILTLAT---CRVPISELRVRQCPLIGDTSVIA 515 (641)
Q Consensus 440 ~~~L~~L~l~~c~~l~~~~~~~l~~~-~~~~~L~~L~l~~~~~i~~~~~~~l~~---~~~~L~~L~l~~~~~l~~~~~~~ 515 (641)
.+.|++|+++++..+++.++..++.. ...++|++|++++ +.+++.++..++. ..+.++.+++++| .+++.+...
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~-n~l~~~~~~~L~~~l~~~~~l~~l~l~~~-~~~~~g~~~ 93 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVG-TRSNDPVAFALAEMLKVNNTLKSLNVESN-FISGSGILA 93 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTT-SCCCHHHHHHHHHHHHHCSSCCEEECCSS-CCCHHHHHH
T ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCC-CCCCHHHHHHHHHHHHHCCCCHHHHHCCC-CCCCHHHHH
T ss_conf 9998688768999989899999998884198257430158-96117789999987752122101210254-322014788
Q ss_pred HHHCCCCCCCCCCCCCCEEECCCCC-CCCHHHHHHHHC--CCCCCCEEEEECCC
Q ss_conf 9802345766679986489526899-999999999638--79998209982077
Q 006538 516 LASMLVDDDRWYGSSIRLLDLYNCG-GITQLAFRWLKK--PYFPRLRWLGVTGS 566 (641)
Q Consensus 516 l~~~~~~~~~~~~~~L~~L~l~~c~-~~~~~~~~~l~~--~~~~~L~~L~l~~~ 566 (641)
+..++. .+++|+.+++..+. .+++.+...+.. ..+++|+.|++..+
T Consensus 94 l~~~l~-----~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 94 LVEALQ-----SNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHGGG-----GCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHH-----HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 999998-----4865247732167786767999999999984998478858189
No 26
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.24 E-value=5.6e-11 Score=67.84 Aligned_cols=52 Identities=15% Similarity=0.154 Sum_probs=26.2
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 980289369999999788999981699987883169998798999999802345766679986489526899
Q 006538 469 LQLQELDLSNLPHLSDNGILTLATCRVPISELRVRQCPLIGDTSVIALASMLVDDDRWYGSSIRLLDLYNCG 540 (641)
Q Consensus 469 ~~L~~L~l~~~~~i~~~~~~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~L~~L~l~~c~ 540 (641)
++|++|++++| .++.. ...+++|+.|++++| .+++. .. ..++|++|++++|+
T Consensus 284 ~~L~~L~Ls~N-~l~~l-----p~~~~~L~~L~L~~N-~L~~l-----~~--------~~~~L~~L~L~~N~ 335 (353)
T d1jl5a_ 284 PSLEELNVSNN-KLIEL-----PALPPRLERLIASFN-HLAEV-----PE--------LPQNLKQLHVEYNP 335 (353)
T ss_dssp TTCCEEECCSS-CCSCC-----CCCCTTCCEEECCSS-CCSCC-----CC--------CCTTCCEEECCSSC
T ss_pred CCCCEEECCCC-CCCCC-----CCCCCCCCEEECCCC-CCCCC-----CC--------CCCCCCEEECCCCC
T ss_conf 98898979799-16835-----665487998989999-68754-----53--------22888989876991
No 27
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.22 E-value=3.7e-10 Score=63.75 Aligned_cols=64 Identities=13% Similarity=0.179 Sum_probs=23.6
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHCC---CCCCEEECCCCC--CCCHHHHHHHHHCCCCCCCCCCCCCCEEECCC
Q ss_conf 98028936999999978899998169---998788316999--87989999998023457666799864895268
Q 006538 469 LQLQELDLSNLPHLSDNGILTLATCR---VPISELRVRQCP--LIGDTSVIALASMLVDDDRWYGSSIRLLDLYN 538 (641)
Q Consensus 469 ~~L~~L~l~~~~~i~~~~~~~l~~~~---~~L~~L~l~~~~--~l~~~~~~~l~~~~~~~~~~~~~~L~~L~l~~ 538 (641)
+.|++|++++ +.+++.++..+++.+ +.|++|+++++. .+.+.+...++.++. .+++|+.|+++.
T Consensus 72 ~~L~~L~L~~-n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~-----~n~sL~~l~l~~ 140 (167)
T d1pgva_ 72 PSLRVLNVES-NFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIE-----ENESLLRVGISF 140 (167)
T ss_dssp SSCCEEECCS-SBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHH-----HCSSCCEEECCC
T ss_pred CCCCCEEEEH-HHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHH-----HCCCCCEEECCC
T ss_conf 3433003301-02145999999999984893898778877688865799999999997-----299853864868
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.2e-11 Score=71.16 Aligned_cols=13 Identities=8% Similarity=0.018 Sum_probs=5.1
Q ss_pred CCCCCCEEECCCC
Q ss_conf 6999878831699
Q 006538 493 CRVPISELRVRQC 505 (641)
Q Consensus 493 ~~~~L~~L~l~~~ 505 (641)
.+++|++|++++|
T Consensus 110 ~l~~L~~L~l~~N 122 (162)
T d1a9na_ 110 SLKSLTYLCILRN 122 (162)
T ss_dssp GCTTCCEEECCSS
T ss_pred CCCCCCHHHCCCC
T ss_conf 3653206640799
No 29
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.14 E-value=2e-09 Score=60.06 Aligned_cols=64 Identities=22% Similarity=0.366 Sum_probs=24.1
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHH---CCCCCCEEECCCCC-CCCHHHHHHHHHCCCCCCCCCCCCCCEEECCC
Q ss_conf 980289369999999788999981---69998788316999-87989999998023457666799864895268
Q 006538 469 LQLQELDLSNLPHLSDNGILTLAT---CRVPISELRVRQCP-LIGDTSVIALASMLVDDDRWYGSSIRLLDLYN 538 (641)
Q Consensus 469 ~~L~~L~l~~~~~i~~~~~~~l~~---~~~~L~~L~l~~~~-~l~~~~~~~l~~~~~~~~~~~~~~L~~L~l~~ 538 (641)
+.++.+++.+ +.+++.++..+++ ..++|+.+++..+. .+++.+...++.++. .+++|++|++..
T Consensus 74 ~~l~~l~l~~-~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~-----~n~~L~~L~l~~ 141 (166)
T d1io0a_ 74 NTLKSLNVES-NFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLE-----KNTTLLKFGYHF 141 (166)
T ss_dssp SSCCEEECCS-SCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHH-----HCSSCCEEECCC
T ss_pred CCCHHHHHCC-CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH-----HCCCCCEEECCC
T ss_conf 2210121025-4322014788999998486524773216778676799999999998-----499847885818
No 30
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=4.9e-14 Score=83.17 Aligned_cols=13 Identities=8% Similarity=-0.097 Sum_probs=6.0
Q ss_pred CCCCCCEEECCCC
Q ss_conf 6999878831699
Q 006538 493 CRVPISELRVRQC 505 (641)
Q Consensus 493 ~~~~L~~L~l~~~ 505 (641)
++++|++|++++|
T Consensus 199 ~l~~L~~L~Ls~N 211 (242)
T d1xwdc1 199 GASGPVILDISRT 211 (242)
T ss_dssp TSCCCSEEECTTS
T ss_pred CCCCCCEEECCCC
T ss_conf 8999998989799
No 31
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=2.7e-14 Score=84.43 Aligned_cols=13 Identities=15% Similarity=0.488 Sum_probs=5.2
Q ss_pred CCCCCCEEECCCC
Q ss_conf 2999748845899
Q 006538 244 GLVSLTHLDLRDA 256 (641)
Q Consensus 244 ~~~~L~~L~l~~~ 256 (641)
.+++|++|+++++
T Consensus 51 ~l~~L~~L~ls~n 63 (242)
T d1xwdc1 51 GFGDLEKIEISQN 63 (242)
T ss_dssp TCTTCCEEEEESC
T ss_pred CCCHHHHHHHCCC
T ss_conf 4643232110221
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.12 E-value=4.2e-12 Score=73.46 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=12.9
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 699989994689988892665753089897599836876
Q 006538 388 SNTGIKVLDLRDCKNLGDEALRAISSLPQLKILLLDGSD 426 (641)
Q Consensus 388 ~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~ 426 (641)
.+++|++|+++++ .++.. ..+..+++|+.|++++|.
T Consensus 46 ~L~~L~~L~Ls~n-~I~~i--~~l~~l~~L~~L~Ls~N~ 81 (198)
T d1m9la_ 46 TLKACKHLALSTN-NIEKI--SSLSGMENLRILSLGRNL 81 (198)
T ss_dssp HTTTCCEEECSEE-EESCC--CCHHHHTTCCEEECCEEE
T ss_pred CCCCCCEEECCCC-CCCCC--CCCCCCCCCCCHHHCCCC
T ss_conf 2604615199446-89986--442478253573413534
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.01 E-value=9e-12 Score=71.82 Aligned_cols=11 Identities=27% Similarity=0.178 Sum_probs=3.6
Q ss_pred CCCCEEECCCC
Q ss_conf 89759983687
Q 006538 415 PQLKILLLDGS 425 (641)
Q Consensus 415 ~~L~~L~l~~~ 425 (641)
++|+.|++++|
T Consensus 48 ~~L~~L~Ls~n 58 (198)
T d1m9la_ 48 KACKHLALSTN 58 (198)
T ss_dssp TTCCEEECSEE
T ss_pred CCCCEEECCCC
T ss_conf 04615199446
No 34
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.96 E-value=3.9e-12 Score=73.64 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=11.5
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCC
Q ss_conf 999899946899888926657530898975998368
Q 006538 389 NTGIKVLDLRDCKNLGDEALRAISSLPQLKILLLDG 424 (641)
Q Consensus 389 ~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 424 (641)
+++|++|+++++ .++......+..+++|+++++++
T Consensus 101 l~~L~~L~L~~N-~l~~i~~~~f~~l~~L~~l~L~~ 135 (192)
T d1w8aa_ 101 LHQLKTLNLYDN-QISCVMPGSFEHLNSLTSLNLAS 135 (192)
T ss_dssp CTTCCEEECCSS-CCCEECTTSSTTCTTCCEEECTT
T ss_pred CCCCCCCCCCCC-CCCCCCHHHHCCCCCCCCCCCCC
T ss_conf 974655245774-53535977856875334200036
No 35
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.87 E-value=2.2e-10 Score=64.86 Aligned_cols=13 Identities=8% Similarity=-0.023 Sum_probs=5.3
Q ss_pred CCCCCCEEECCCC
Q ss_conf 6999878831699
Q 006538 493 CRVPISELRVRQC 505 (641)
Q Consensus 493 ~~~~L~~L~l~~~ 505 (641)
.+++|+.|++++|
T Consensus 88 ~~~~L~~L~l~~N 100 (124)
T d1dcea3 88 SCPRLVLLNLQGN 100 (124)
T ss_dssp GCTTCCEEECTTS
T ss_pred CCCCCCEEECCCC
T ss_conf 7999999989799
No 36
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.87 E-value=1.4e-10 Score=65.90 Aligned_cols=51 Identities=12% Similarity=0.183 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 763451499999999610510014586404018999999850012233468
Q 006538 9 KSLDQLPAALLCTIITKLDVASISSVAATCSTFRACAAQILSFLTSFHLLD 59 (641)
Q Consensus 9 ~~~~~LP~ei~~~I~~~L~~~d~~~~~~vcr~w~~~~~~~~~~l~~l~l~~ 59 (641)
+.+..||+|++.+||+||+..|+.++++|||+|+.++......++.+.++.
T Consensus 4 D~~~~LP~Ell~~I~s~Ld~~dL~~~s~Vcr~W~~~~~~d~~LWr~l~~~~ 54 (100)
T d1nexb1 4 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISE 54 (100)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHTTTCHHHHHHHHTCSHHHHHHHHHT
T ss_pred CCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_conf 865459899999999779988999999999999999977899999999874
No 37
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.86 E-value=4.5e-10 Score=63.31 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=5.9
Q ss_pred HCCCCCCEEECCCCCC
Q ss_conf 0898975998368767
Q 006538 412 SSLPQLKILLLDGSDI 427 (641)
Q Consensus 412 ~~~~~L~~L~l~~~~l 427 (641)
..+++|+.|++++|.+
T Consensus 40 ~~l~~L~~L~l~~N~i 55 (124)
T d1dcea3 40 AALRCLEVLQASDNAL 55 (124)
T ss_dssp GGCTTCCEEECCSSCC
T ss_pred HHHHCCCCCCCCCCCC
T ss_conf 5543135453243211
No 38
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=1.5e-09 Score=60.68 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH
Q ss_conf 345149999999961051001458640401899999
Q 006538 11 LDQLPAALLCTIITKLDVASISSVAATCSTFRACAA 46 (641)
Q Consensus 11 ~~~LP~ei~~~I~~~L~~~d~~~~~~vcr~w~~~~~ 46 (641)
++.||+|++.+||+||+.+|+.++++|||+|++++.
T Consensus 1 f~~LP~eil~~If~~L~~~dl~~~~~Vcr~w~~l~~ 36 (41)
T d1fs1a1 1 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLAS 36 (41)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHT
T ss_pred CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 985879999999986999999999999999999967
No 39
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=2.9e-09 Score=59.24 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=36.6
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH
Q ss_conf 876345149999999961051001458640401899999
Q 006538 8 GKSLDQLPAALLCTIITKLDVASISSVAATCSTFRACAA 46 (641)
Q Consensus 8 ~~~~~~LP~ei~~~I~~~L~~~d~~~~~~vcr~w~~~~~ 46 (641)
-+.++.||+||+.+||+||+..|+.+++.|||+|++++.
T Consensus 16 ~D~i~~LP~Eil~~Ils~Ld~~dL~~~~~vcr~w~~l~~ 54 (102)
T d2ovrb1 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAE 54 (102)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHT
T ss_pred CCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 599666999999999983999999999999999999978
No 40
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47 E-value=2e-08 Score=55.07 Aligned_cols=46 Identities=15% Similarity=0.276 Sum_probs=38.6
Q ss_pred CCCCCCH----HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf 7634514----9999999961051001458640401899999985001223
Q 006538 9 KSLDQLP----AALLCTIITKLDVASISSVAATCSTFRACAAQILSFLTSF 55 (641)
Q Consensus 9 ~~~~~LP----~ei~~~I~~~L~~~d~~~~~~vcr~w~~~~~~~~~~l~~l 55 (641)
+.+..|| +||..+||+||+..|+.++++|||+|+.++. ....++.+
T Consensus 9 D~i~~LP~~l~~EI~~~Ils~Ld~~dL~~~s~Vck~W~~l~~-d~~lWk~~ 58 (118)
T d1p22a1 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTS-DGMLWKKL 58 (118)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHH-HTTHHHHH
T ss_pred CHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC-CHHHHHHH
T ss_conf 689887899819999999976999999999999999999976-98999999
No 41
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=1.9e-07 Score=50.13 Aligned_cols=14 Identities=29% Similarity=0.285 Sum_probs=4.5
Q ss_pred HCCCCCCEEECCCC
Q ss_conf 08989759983687
Q 006538 412 SSLPQLKILLLDGS 425 (641)
Q Consensus 412 ~~~~~L~~L~l~~~ 425 (641)
..+++|+.|++++|
T Consensus 53 ~~l~~L~~L~Ls~N 66 (156)
T d2ifga3 53 RGLGELRNLTIVKS 66 (156)
T ss_dssp CSCCCCSEEECCSS
T ss_pred CCCCCCCCCEEECC
T ss_conf 56666672162021
No 42
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.19 E-value=3.5e-07 Score=48.84 Aligned_cols=62 Identities=19% Similarity=0.177 Sum_probs=24.6
Q ss_pred CCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCC
Q ss_conf 997898156888878899980269998999468998889266575308989759983687678
Q 006538 366 SLTHVCLRWCNLLTNHAIKSLASNTGIKVLDLRDCKNLGDEALRAISSLPQLKILLLDGSDIS 428 (641)
Q Consensus 366 ~L~~L~l~~~~~l~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~ 428 (641)
+|++|++.+.+.++......+..+++|+.|+++++ .++.....++..+++|+.|++++|.++
T Consensus 32 ~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~Ls~N~l~ 93 (156)
T d2ifga3 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS-GLRFVAPDAFHFTPRLSRLNLSFNALE 93 (156)
T ss_dssp CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS-CCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECC-CCCCCCCCCCCCCCCCCCEECCCCCCC
T ss_conf 65743168986644369212256666672162021-247742011124554333322678785
No 43
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.85 E-value=4.6e-06 Score=43.26 Aligned_cols=11 Identities=36% Similarity=0.585 Sum_probs=4.2
Q ss_pred CCCCCEEECCC
Q ss_conf 88864884578
Q 006538 440 ITSLVKLSLRG 450 (641)
Q Consensus 440 ~~~L~~L~l~~ 450 (641)
+++|+.|++++
T Consensus 64 ~~~L~~L~Ls~ 74 (162)
T d1koha1 64 IPELLSLNLSN 74 (162)
T ss_dssp CTTCCCCCCCS
T ss_pred CCCCCEEECCC
T ss_conf 87878863777
No 44
>d1wh4a_ a.77.1.2 (A:) Interleukin-1 receptor-associated kinase 4, IRAK4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.34 E-value=3.4 Score=13.92 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 9756777876345149999999961051001458640401899999985
Q 006538 1 MAAAETSGKSLDQLPAALLCTIITKLDVASISSVAATCSTFRACAAQIL 49 (641)
Q Consensus 1 ~~~~~~~~~~~~~LP~ei~~~I~~~L~~~d~~~~~~vcr~w~~~~~~~~ 49 (641)
|..+..+...|.+||..+..++..+|+..+ .|+.++....
T Consensus 8 ~~~~~~~~~~I~~Lp~~~~~~L~~~LD~~~---------~W~~LA~~i~ 47 (127)
T d1wh4a_ 8 MNKPLTPSTYIRNLNVGILRKLSDFIDPQE---------GWKKLAVAIK 47 (127)
T ss_dssp CCCCCCTTSBGGGSCHHHHHHHHHHHSSTT---------HHHHHHHHCB
T ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHCCCCC---------CHHHHHHHHC
T ss_conf 889899985076399999999998539854---------2999999856
Done!