Query 006540
Match_columns 641
No_of_seqs 390 out of 2281
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 18:26:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006540.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2168-2172//hhsearch_pdb/006540hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4etp_A Kinesin-like protein KA 1.0 1 1 750.7 36.6 372 59-434 15-402 (403)
2 3u06_A Protein claret segregat 1.0 1 1 747.0 35.0 364 60-436 16-389 (412)
3 3cob_A Kinesin heavy chain-lik 1.0 1 1 731.0 28.2 333 99-439 1-337 (369)
4 3bfn_A Kinesin-like protein KI 1.0 1 1 722.4 26.0 336 97-442 15-360 (388)
5 2rep_A Kinesin-like protein KI 1.0 1 1 717.6 28.5 333 91-429 10-376 (376)
6 2owm_A Nckin3-434, related to 1.0 1 1 717.3 29.3 336 98-440 33-425 (443)
7 2y65_A Kinesin, kinesin heavy 1.0 1 1 713.4 25.0 329 100-441 8-345 (365)
8 3b6u_A Kinesin-like protein KI 1.0 1 1 708.6 27.7 337 96-441 14-365 (372)
9 2vvg_A Kinesin-2; motor protei 1.0 1 1 706.9 28.0 328 102-440 3-346 (350)
10 1t5c_A CENP-E protein, centrom 1.0 1 1 704.7 29.3 329 102-442 3-341 (349)
No 1
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=750.71 Aligned_cols=372 Identities=33% Similarity=0.448 Sum_probs=327.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEC---C----C
Q ss_conf 37789999999999999999999999898999999966323189988999982899966577665758942---9----8
Q 006540 59 PEQQKNELEQSIINLEGEIVELRLKKRRLDEKRREALNKILDIKGCIRVFCRVRSFLVTGRRVIHEPVLTE---L----E 131 (641)
Q Consensus 59 ~e~~~~~l~~~i~~l~~~~~~l~~~~~~~~~~Rr~lhn~i~~lkG~IrV~~RvRP~~~~e~~~~~~~v~~~---~----~ 131 (641)
.+++..+|++.|++++.++.++.+++.+++..||+|||+++|+||||||||||||++..+.......+.+. + .
T Consensus 15 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~ 94 (403)
T 4etp_A 15 LKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQ 94 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCE
T ss_conf 99999999999999999999999999999999999998999718986999990889976344678706874036778843
Q ss_pred EEEEEEC---CCEEEEEECEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHH
Q ss_conf 7999959---9127998115656989803468605999999634952117721567999332513799999944578999
Q 006540 132 KVVVRSG---GSKKEFGFDKVFNQAASQEDVFVEVEPILRSALDGHNVCVLAYGQTGTGKTFTMDGTSDQPGIVPRALEE 208 (641)
Q Consensus 132 ~v~i~~~---~~~k~F~FD~VF~~~atQ~eVf~~v~plV~svl~G~N~~IfAYGqTGSGKTyTM~G~~~~~GIIpRai~~ 208 (641)
.+.+... ...+.|.||+||+++++|++||+++.|+|+++++|||+||||||||||||||||+|+ ++|||||++++
T Consensus 95 ~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~--~~Giipr~~~~ 172 (403)
T 4etp_A 95 SMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNP--GDGIIPSTISH 172 (403)
T ss_dssp EEEEEECSSSCEEEEEEESEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCT--TTSHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCC--CCCCCHHHHHH
T ss_conf 7998267887675687768897998865899999999999985896169999777999983674799--98632147999
Q ss_pred HHHHHHC--CCCCEEEEEEEEEEEECCEEEECCCCCCCCCHHHHHCCCCEEEEECC-CCCEEECCCEEEECCCHHHHHHH
Q ss_conf 9999722--79960899985999955603324899974300111003660167689-99868569689982895788999
Q 006540 209 LFRQAAL--DNSSSVTFSMSMLEVYMGSVRDLLAPKPVFKAYEAATRCNLNIQTDA-KGTVEIEGLTEVQIPDFTKARWW 285 (641)
Q Consensus 209 LF~~~~~--~~~~~~~V~vS~lEIYnE~I~DLL~~~~~~~~~~~~~~~~L~i~ed~-~~~v~V~glt~v~V~s~~e~~~l 285 (641)
||..+.. ..++.|.|.+||+|||||+|+|||.+....... ......+.+++++ .++++|.|++++.|.++++++.+
T Consensus 173 lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~-~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~l 251 (403)
T 4etp_A 173 IFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKED-TSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEII 251 (403)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC---------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCCCC-CCCCCCEEEEEECCCCCEEECCCEEEEECCHHHHHHH
T ss_conf 998887640368348999999998366146856776655444-5667650368707999788368179991999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99743202444457778988826799999998357787705896758786589843235698761025665513879999
Q 006540 286 YNKGRRVRSTSWTNVNEASSRSHCLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSAL 365 (641)
Q Consensus 286 l~~g~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~a~g~rlkE~~~INkSLsaL 365 (641)
+..|.++|++++|.||+.|||||+||+|+|.+.+... +....|+|+|||||||||+.++++.|+|++|+.+||+||++|
T Consensus 252 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~-~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aL 330 (403)
T 4etp_A 252 LKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKT-GAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSAL 330 (403)
T ss_dssp HHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTT-CCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9999973443445477656776427999999860688-976689999997999864445677048899999987889999
Q ss_pred HHHHHHHHHCCC---CCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999999971899---955789821002220148986210377339997777876999999999612313422
Q 006540 366 ADVIAALRRKRG---HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRE 434 (641)
Q Consensus 366 g~VI~aL~~k~~---hIPYRdSKLT~LLqdsLgGnskT~mI~~ISP~~~~~~ETlsTLrFA~rak~I~~~~~ 434 (641)
|+||.||+.+.. ||||||||||+||||||||||+|+||+||||+..+++||++||+||+|+++|+.++.
T Consensus 331 g~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 331 GDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp HHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999861468998677456668898798628996499999937963348999999999999710526789
No 2
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=1.00 E-value=1 Score=746.95 Aligned_cols=364 Identities=33% Similarity=0.511 Sum_probs=327.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCE-EECCCEEEEEEC
Q ss_conf 7789999999999999999999999898999999966323189988999982899966577665758-942987999959
Q 006540 60 EQQKNELEQSIINLEGEIVELRLKKRRLDEKRREALNKILDIKGCIRVFCRVRSFLVTGRRVIHEPV-LTELEKVVVRSG 138 (641)
Q Consensus 60 e~~~~~l~~~i~~l~~~~~~l~~~~~~~~~~Rr~lhn~i~~lkG~IrV~~RvRP~~~~e~~~~~~~v-~~~~~~v~i~~~ 138 (641)
.+.+.++++.+++++.++.++.+++.+++..||+|||+++|+||||||||||||++..|.....+.+ ..+...+.+...
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~ 95 (412)
T 3u06_A 16 RQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSI 95 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEECCCCGGGTTSCBCEEEEEETTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCEEEEECCCCEEEEECC
T ss_conf 99999999999999999999999999999999998878887179979999848998100267612899369987998057
Q ss_pred C-------CEEEEEECEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 9-------127998115656989803468605999999634952117721567999332513799999944578999999
Q 006540 139 G-------SKKEFGFDKVFNQAASQEDVFVEVEPILRSALDGHNVCVLAYGQTGTGKTFTMDGTSDQPGIVPRALEELFR 211 (641)
Q Consensus 139 ~-------~~k~F~FD~VF~~~atQ~eVf~~v~plV~svl~G~N~~IfAYGqTGSGKTyTM~G~~~~~GIIpRai~~LF~ 211 (641)
. ..+.|.||+||+++++|++||+.+.|+|+++++|||+||||||||||||||||+|.++++|||||++++||.
T Consensus 96 ~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~ 175 (412)
T 3u06_A 96 DAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFD 175 (412)
T ss_dssp C-------CCCEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCCEEEEEESSTTSSHHHHHTEETTEECHHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEECEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 85445666863776086818999788999999999999977974479974589999716736778878667899999998
Q ss_pred HHHC--CCCCEEEEEEEEEEEECCEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHH
Q ss_conf 9722--79960899985999955603324899974300111003660167689998685696899828957889999974
Q 006540 212 QAAL--DNSSSVTFSMSMLEVYMGSVRDLLAPKPVFKAYEAATRCNLNIQTDAKGTVEIEGLTEVQIPDFTKARWWYNKG 289 (641)
Q Consensus 212 ~~~~--~~~~~~~V~vS~lEIYnE~I~DLL~~~~~~~~~~~~~~~~L~i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g 289 (641)
.+.. ..++.|.|.+||+|||||+|+|||.+... ...+.+.+++.++++|.|++++.|.++++++.++..|
T Consensus 176 ~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~--------~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g 247 (412)
T 3u06_A 176 SIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQK--------DMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTA 247 (412)
T ss_dssp HHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCC--------CCCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCC--------CCEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHHH
T ss_conf 65342036834887778999967745786788788--------8635530358998897360799949999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 32024444577789888267999999983577877058967587865898432356987610256655138799999999
Q 006540 290 RRVRSTSWTNVNEASSRSHCLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVI 369 (641)
Q Consensus 290 ~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI 369 (641)
.++|++++|.||+.|||||+||+|+|.+.+... +....|+|+|||||||||.. .|.+++|+.+||+||++||+||
T Consensus 248 ~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~-~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI 322 (412)
T 3u06_A 248 KMNRATASTAGNERSSRSHAVTKLELIGRHAEK-QEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVI 322 (412)
T ss_dssp HHHCC-----CHHHHTTCEEEEEEEEEEEETTT-TEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 743542346798877673299999999970788-97888999999899777677----6630476887758899999999
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9997189995578982100222014898621037733999777787699999999961231342233
Q 006540 370 AALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELS 436 (641)
Q Consensus 370 ~aL~~k~~hIPYRdSKLT~LLqdsLgGnskT~mI~~ISP~~~~~~ETlsTLrFA~rak~I~~~~~~~ 436 (641)
.||+.+..||||||||||+||||||||||+|+||+||||+..+++||++||+||+|++.|+.++...
T Consensus 323 ~aL~~~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~~~ 389 (412)
T 3u06_A 323 LALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKR 389 (412)
T ss_dssp HHHHTTCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9986358888732437889889861899669999994897334899999999999974324666622
No 3
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=731.04 Aligned_cols=333 Identities=40% Similarity=0.621 Sum_probs=302.4
Q ss_pred HCCCCCEEEEEEECCCCCCCCCCCCCCEEECCC--EEEEEE-CCCEEEEEECEEECCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 318998899998289996657766575894298--799995-99127998115656989803468605999999634952
Q 006540 99 LDIKGCIRVFCRVRSFLVTGRRVIHEPVLTELE--KVVVRS-GGSKKEFGFDKVFNQAASQEDVFVEVEPILRSALDGHN 175 (641)
Q Consensus 99 ~~lkG~IrV~~RvRP~~~~e~~~~~~~v~~~~~--~v~i~~-~~~~k~F~FD~VF~~~atQ~eVf~~v~plV~svl~G~N 175 (641)
+|+||+|||+|||||+...|.....++.....+ .+.... .+..+.|.||+||+++++|++||+++.|+|+++++|||
T Consensus 1 ee~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~l~G~n 80 (369)
T 3cob_A 1 EDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYN 80 (369)
T ss_dssp ---CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECTTSCEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCE
T ss_pred CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEECCEEECCCCCCCEEHHHHHHHHHHHHCCCC
T ss_conf 98899849999879998345467983799769967999337899826886598989999731402213132576646971
Q ss_pred EEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC-CCEEEEEEEEEEEECCEEEECCCCCCCCCHHHHHCCC
Q ss_conf 117721567999332513799999944578999999972279-9608999859999556033248999743001110036
Q 006540 176 VCVLAYGQTGTGKTFTMDGTSDQPGIVPRALEELFRQAALDN-SSSVTFSMSMLEVYMGSVRDLLAPKPVFKAYEAATRC 254 (641)
Q Consensus 176 ~~IfAYGqTGSGKTyTM~G~~~~~GIIpRai~~LF~~~~~~~-~~~~~V~vS~lEIYnE~I~DLL~~~~~~~~~~~~~~~ 254 (641)
+||||||||||||||||+|+++++|||||++++||..+.... .+.|.|.+||+|||||+|+|||.+... ...
T Consensus 81 ~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------~~~ 153 (369)
T 3cob_A 81 VCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA-------KRL 153 (369)
T ss_dssp EEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSS-------CCC
T ss_pred EEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCC-------CCC
T ss_conf 5999878999988375117998886258999999999874135752677899987707632345787556-------776
Q ss_pred CEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEE
Q ss_conf 60167689998685696899828957889999974320244445777898882679999999835778770589675878
Q 006540 255 NLNIQTDAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCLMRITIFRHGDALEAKTEVSKLWMV 334 (641)
Q Consensus 255 ~L~i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~~~~~~~skL~lV 334 (641)
.+.|++|+.++++|.|++++.|.++++++.++..|.++|++++|.||..|||||+||+|+|.+.+... +....|+|+||
T Consensus 154 ~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~-~~~~~skL~lV 232 (369)
T 3cob_A 154 KLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT-QAIARGKLSFV 232 (369)
T ss_dssp CCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTT-CCEEEEEEEEE
T ss_pred CEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCC-CCEEEEEEEEE
T ss_conf 42789979998880598799808999999999987525523034477877763389999999852787-72788899999
Q ss_pred ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHH
Q ss_conf 65898432356987610256655138799999999999718999557898210022201489862103773399977778
Q 006540 335 DLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVG 414 (641)
Q Consensus 335 DLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI~aL~~k~~hIPYRdSKLT~LLqdsLgGnskT~mI~~ISP~~~~~~ 414 (641)
|||||||+.++++.|.+++|+.+||+||++||+||.||+.+..||||||||||+||||+|||||+|+||+||||+..+++
T Consensus 233 DLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ 312 (369)
T 3cob_A 233 DLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLD 312 (369)
T ss_dssp ECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHH
T ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHH
T ss_conf 68878754434763023477878778899999999998648996787477778878876289852799999477200289
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 7699999999961231342233889
Q 006540 415 ETICSLSFAKRARGIESNRELSEDL 439 (641)
Q Consensus 415 ETlsTLrFA~rak~I~~~~~~~~~~ 439 (641)
||++||+||+||++|++.|.+|++.
T Consensus 313 ETl~TLrfA~rak~i~~~~~~n~~~ 337 (369)
T 3cob_A 313 ETHNSLTYASRVRSIVNDPSKNVSS 337 (369)
T ss_dssp HHHHHHHHHHHHHTCBCCCCCCEEC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 9999999999986545677415788
No 4
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=722.35 Aligned_cols=336 Identities=32% Similarity=0.508 Sum_probs=304.4
Q ss_pred HHHCCCCCEEEEEEECCCCCCCCCC-CCCCEE-ECCCEEEEEEC---CCEEEEEECEEECCCCCCHHHHHHH-HHHHHHH
Q ss_conf 3231899889999828999665776-657589-42987999959---9127998115656989803468605-9999996
Q 006540 97 KILDIKGCIRVFCRVRSFLVTGRRV-IHEPVL-TELEKVVVRSG---GSKKEFGFDKVFNQAASQEDVFVEV-EPILRSA 170 (641)
Q Consensus 97 ~i~~lkG~IrV~~RvRP~~~~e~~~-~~~~v~-~~~~~v~i~~~---~~~k~F~FD~VF~~~atQ~eVf~~v-~plV~sv 170 (641)
.....+++|||+|||||+...|... ...++. .++..+.+... ...+.|.||+||+++++|++||+.+ .|+|+++
T Consensus 15 ~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~ 94 (388)
T 3bfn_A 15 YFQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHL 94 (388)
T ss_dssp CSSSCCCCCEEEEEECCCC-----------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHHHH
T ss_pred CCCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 45689999799997798991453469986399559985999568888770598723695678977577899888888876
Q ss_pred HCCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHC----CCCCEEEEEEEEEEEECCEEEECCCCCCCCC
Q ss_conf 349521177215679993325137999999445789999999722----7996089998599995560332489997430
Q 006540 171 LDGHNVCVLAYGQTGTGKTFTMDGTSDQPGIVPRALEELFRQAAL----DNSSSVTFSMSMLEVYMGSVRDLLAPKPVFK 246 (641)
Q Consensus 171 l~G~N~~IfAYGqTGSGKTyTM~G~~~~~GIIpRai~~LF~~~~~----~~~~~~~V~vS~lEIYnE~I~DLL~~~~~~~ 246 (641)
++|||+||||||||||||||||+|+++++|||||++++||..+.. ...+.|.|.+||+|||||+|+|||++...
T Consensus 95 l~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~-- 172 (388)
T 3bfn_A 95 LEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASG-- 172 (388)
T ss_dssp TTTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSC--
T ss_pred HCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCCCCC--
T ss_conf 169656676116888999768656755664168999999999987423377714899999999988864560016788--
Q ss_pred HHHHHCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCE
Q ss_conf 01110036601676899986856968998289578899999743202444457778988826799999998357787705
Q 006540 247 AYEAATRCNLNIQTDAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCLMRITIFRHGDALEAKT 326 (641)
Q Consensus 247 ~~~~~~~~~L~i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~~~~~ 326 (641)
.+.|++|+.++++|.|++++.|.++++++.++..|.++|++++|.||+.|||||+||+|+|.+.........
T Consensus 173 --------~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~ 244 (388)
T 3bfn_A 173 --------DLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQ 244 (388)
T ss_dssp --------BCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCE
T ss_pred --------CCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCE
T ss_conf --------845998699998853605999589999999999975026522364778777773999999998226888733
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEC
Q ss_conf 89675878658984323569876102566551387999999999997189995578982100222014898621037733
Q 006540 327 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHA 406 (641)
Q Consensus 327 ~~skL~lVDLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI~aL~~k~~hIPYRdSKLT~LLqdsLgGnskT~mI~~I 406 (641)
..|+|+|||||||||+.++++.|.+++|+++||+||++||+||.||+++..||||||||||+||||||||||+|+||+||
T Consensus 245 ~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~i 324 (388)
T 3bfn_A 245 REGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANI 324 (388)
T ss_dssp EEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 68899999898776655456755114777675063999999999996699988675658899999860899628999997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 999777787699999999961231342233889999
Q 006540 407 SPCEEDVGETICSLSFAKRARGIESNRELSEDLKKR 442 (641)
Q Consensus 407 SP~~~~~~ETlsTLrFA~rak~I~~~~~~~~~~~~~ 442 (641)
||+..+++||++||+||+||++|+|.|.+|+++...
T Consensus 325 SP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~ 360 (388)
T 3bfn_A 325 APERRFYLDTVSALNFAARSKEVINRPFTNESLQPH 360 (388)
T ss_dssp CCSGGGHHHHHHHHHHHCSEEEEC------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 985000899999999999985175767356789989
No 5
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=717.56 Aligned_cols=333 Identities=38% Similarity=0.533 Sum_probs=294.2
Q ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEE---------ECCCEEEEEE-------------CCCEEEEEECE
Q ss_conf 9999663231899889999828999665776657589---------4298799995-------------99127998115
Q 006540 91 RREALNKILDIKGCIRVFCRVRSFLVTGRRVIHEPVL---------TELEKVVVRS-------------GGSKKEFGFDK 148 (641)
Q Consensus 91 Rr~lhn~i~~lkG~IrV~~RvRP~~~~e~~~~~~~v~---------~~~~~v~i~~-------------~~~~k~F~FD~ 148 (641)
--+|||++++++|||||+|||||++..|......++. .+...+.+.. ....+.|.||+
T Consensus 10 ~~~~hn~~~~~~~~irV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD~ 89 (376)
T 2rep_A 10 HSSGLVPRGSLKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFDR 89 (376)
T ss_dssp -------------CEEEEEEECCCCTTSCCCCGGGSBCCC------CCCCEEECCC-----------------CEEECSE
T ss_pred CCCCCCHHHCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECE
T ss_conf 32123211226898399999197893550569854998167666567885799944776543225666778745665247
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCC----CCCCHHHHHHHHHHHHHC--CCCCEEE
Q ss_conf 6569898034686059999996349521177215679993325137999----999445789999999722--7996089
Q 006540 149 VFNQAASQEDVFVEVEPILRSALDGHNVCVLAYGQTGTGKTFTMDGTSD----QPGIVPRALEELFRQAAL--DNSSSVT 222 (641)
Q Consensus 149 VF~~~atQ~eVf~~v~plV~svl~G~N~~IfAYGqTGSGKTyTM~G~~~----~~GIIpRai~~LF~~~~~--~~~~~~~ 222 (641)
||+++++|++||+++.|+|+++++|||+||||||||||||||||+|+.. ++|||||++++||..+.. ..++.|.
T Consensus 90 Vf~~~~~Q~~Vy~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~ 169 (376)
T 2rep_A 90 VFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYS 169 (376)
T ss_dssp EECTTCCHHHHHHHHHHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 84886550023454777888743897549997678999870686668888866588079999999999997444772899
Q ss_pred EEEEEEEEECCEEEECCCCCCCCCHHHHHCCCCEEEEEC--CCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 998599995560332489997430011100366016768--999868569689982895788999997432024444577
Q 006540 223 FSMSMLEVYMGSVRDLLAPKPVFKAYEAATRCNLNIQTD--AKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNV 300 (641)
Q Consensus 223 V~vS~lEIYnE~I~DLL~~~~~~~~~~~~~~~~L~i~ed--~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~ 300 (641)
|.+||+|||||+|+|||++.... .....+.++++ +.++++|.|++++.|.+++|++.++..|.++|++++|.|
T Consensus 170 v~vS~~EIYnE~i~DLL~~~~~~-----~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~ 244 (376)
T 2rep_A 170 FVASYVEIYNETVRDLLATGTRK-----GQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQ 244 (376)
T ss_dssp EEEEEEEEETTEEEETTCCC-------------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC---
T ss_pred EEEEEEEEECCEEEECCCCCCCC-----CCCCCCEEEECCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999888866724442223-----5677723775237889879779679994789999999999974366622447
Q ss_pred CCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 7898882679999999835778770589675878658984323569876----102566551387999999999997189
Q 006540 301 NEASSRSHCLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATG----QTLDEGRAINLSLSALADVIAALRRKR 376 (641)
Q Consensus 301 N~~SSRSH~If~I~i~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~a~g----~rlkE~~~INkSLsaLg~VI~aL~~k~ 376 (641)
|+.|||||+||+|+|.+.+... +....|+|+|||||||||+.++++.| +|++|+.+||+||++||+||.||+++.
T Consensus 245 N~~SSRSH~Ifti~v~~~~~~~-~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~ 323 (376)
T 2rep_A 245 NERSSRSHSVFQLQISGEHSSR-GLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKE 323 (376)
T ss_dssp --CGGGSEEEEEEEEEEEESSS-CCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTTC
T ss_pred CCCCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 8877775499999999883698-967776789997887753565566676542123677676088999999999985589
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 99557898210022201489862103773399977778769999999996123
Q 006540 377 GHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI 429 (641)
Q Consensus 377 ~hIPYRdSKLT~LLqdsLgGnskT~mI~~ISP~~~~~~ETlsTLrFA~rak~I 429 (641)
.||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|++++
T Consensus 324 ~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 324 SHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp SCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 83577578889998986189870999999698522399999999999997429
No 6
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=717.28 Aligned_cols=336 Identities=37% Similarity=0.533 Sum_probs=295.7
Q ss_pred HHCCCCCEEEEEEECCCCCCCCC-CCCCCEEECCC--EEEEEEC----------------CCEEEEEECEEECC------
Q ss_conf 23189988999982899966577-66575894298--7999959----------------91279981156569------
Q 006540 98 ILDIKGCIRVFCRVRSFLVTGRR-VIHEPVLTELE--KVVVRSG----------------GSKKEFGFDKVFNQ------ 152 (641)
Q Consensus 98 i~~lkG~IrV~~RvRP~~~~e~~-~~~~~v~~~~~--~v~i~~~----------------~~~k~F~FD~VF~~------ 152 (641)
..+++++|||+|||||++..|.. +..+++.+++. .+.+... ...+.|.||+||++
T Consensus 33 ~~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~ 112 (443)
T 2owm_A 33 SKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDE 112 (443)
T ss_dssp -CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTST
T ss_pred CCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCC
T ss_conf 67899894999993999968862699459997589862799558876543333321233667726852738278776776
Q ss_pred -CCCCHHHHHHH-HHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEEEEE
Q ss_conf -89803468605-99999963495211772156799933251379999994457899999997227----9960899985
Q 006540 153 -AASQEDVFVEV-EPILRSALDGHNVCVLAYGQTGTGKTFTMDGTSDQPGIVPRALEELFRQAALD----NSSSVTFSMS 226 (641)
Q Consensus 153 -~atQ~eVf~~v-~plV~svl~G~N~~IfAYGqTGSGKTyTM~G~~~~~GIIpRai~~LF~~~~~~----~~~~~~V~vS 226 (641)
.++|++||+.+ .|+|+++++|||+||||||||||||||||+|+++++|||||++++||..+... .++.|.|.+|
T Consensus 113 ~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS 192 (443)
T 2owm_A 113 HYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVS 192 (443)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 57879999876324688886368742799867889999888646877775379999999998876521367734999999
Q ss_pred EEEEECCEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99995560332489997430011100366016768999868569689982895788999997432024444577789888
Q 006540 227 MLEVYMGSVRDLLAPKPVFKAYEAATRCNLNIQTDAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSR 306 (641)
Q Consensus 227 ~lEIYnE~I~DLL~~~~~~~~~~~~~~~~L~i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSR 306 (641)
|+|||||+|+|||.+.... .....|.|++|+.++++|.|++++.|.+++|++.+|..|.++|++++|.||+.|||
T Consensus 193 ~lEIYnE~i~DLL~~~~~~-----~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSR 267 (443)
T 2owm_A 193 YFEVYNEHVRDLLAPVVPN-----KPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSR 267 (443)
T ss_dssp EEEEETTEEEETTSCCCSS-----CCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTT
T ss_pred EEEEECCEEEECCCCCCCC-----CCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 9999889756856763457-----86534430377999995268779982899999999999973378633758776677
Q ss_pred CEEEEEEEEEEECCC---CCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-------
Q ss_conf 267999999983577---8770589675878658984323569876102566551387999999999997189-------
Q 006540 307 SHCLMRITIFRHGDA---LEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKR------- 376 (641)
Q Consensus 307 SH~If~I~i~~~~~~---~~~~~~~skL~lVDLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI~aL~~k~------- 376 (641)
||+||+|+|.+.... .......|+|+|||||||||+.++++.|+|++|+.+||+||++||+||.||+++.
T Consensus 268 SH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~ 347 (443)
T 2owm_A 268 SHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPS 347 (443)
T ss_dssp EEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC---------
T ss_pred CEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 71999999998603567887406887799997988753565677664121100105789999999999860455555444
Q ss_pred ---------------CCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH-HHH
Q ss_conf ---------------9955789821002220148986210377339997777876999999999612313422338-899
Q 006540 377 ---------------GHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSE-DLK 440 (641)
Q Consensus 377 ---------------~hIPYRdSKLT~LLqdsLgGnskT~mI~~ISP~~~~~~ETlsTLrFA~rak~I~~~~~~~~-~~~ 440 (641)
.||||||||||+||||+|||||+|+||+||||+ +++||++||+||+||++|++.+.+|+ +..
T Consensus 348 ~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~ 425 (443)
T 2owm_A 348 SPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGV 425 (443)
T ss_dssp ----------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCCC---
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCC
T ss_conf 322234333445677745574547688888862799708999981643--078999999999998544563335135776
No 7
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=713.35 Aligned_cols=329 Identities=36% Similarity=0.527 Sum_probs=296.5
Q ss_pred CCCCCEEEEEEECCCCCCCCC-CCCCCEEECCC--EEEEEECCCEEEEEECEEECCCCCCHHHHHHH-HHHHHHHHCCCC
Q ss_conf 189988999982899966577-66575894298--79999599127998115656989803468605-999999634952
Q 006540 100 DIKGCIRVFCRVRSFLVTGRR-VIHEPVLTELE--KVVVRSGGSKKEFGFDKVFNQAASQEDVFVEV-EPILRSALDGHN 175 (641)
Q Consensus 100 ~lkG~IrV~~RvRP~~~~e~~-~~~~~v~~~~~--~v~i~~~~~~k~F~FD~VF~~~atQ~eVf~~v-~plV~svl~G~N 175 (641)
..+++|||+|||||+...|.. +...++.+.+. ...+... .+.|.||+||+++++|++||+++ .|+|+++++|||
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~--~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n 85 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA--GKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYN 85 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEET--TEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCC
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEEC--CEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 899995999994969946731599259994799877679989--989867469647899899999863037799867982
Q ss_pred EEEEECCCCCCCCCEEECCCC---CCCCCHHHHHHHHHHHHHC-CCCCEEEEEEEEEEEECCEEEECCCCCCCCCHHHHH
Q ss_conf 117721567999332513799---9999445789999999722-799608999859999556033248999743001110
Q 006540 176 VCVLAYGQTGTGKTFTMDGTS---DQPGIVPRALEELFRQAAL-DNSSSVTFSMSMLEVYMGSVRDLLAPKPVFKAYEAA 251 (641)
Q Consensus 176 ~~IfAYGqTGSGKTyTM~G~~---~~~GIIpRai~~LF~~~~~-~~~~~~~V~vS~lEIYnE~I~DLL~~~~~~~~~~~~ 251 (641)
+||||||||||||||||+|+. .++|||||++++||..+.. ..++.|.|.+||+|||||+|+|||++...
T Consensus 86 ~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~------- 158 (365)
T 2y65_A 86 GTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKV------- 158 (365)
T ss_dssp EEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCC-------
T ss_pred EEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCC-------
T ss_conf 4898345899999648866888755577377999999999983368953999999999987721262258767-------
Q ss_pred CCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEE
Q ss_conf 03660167689998685696899828957889999974320244445777898882679999999835778770589675
Q 006540 252 TRCNLNIQTDAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCLMRITIFRHGDALEAKTEVSKL 331 (641)
Q Consensus 252 ~~~~L~i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~~~~~~~skL 331 (641)
.+.+++|+.++++|.|++++.|.++++++.++..|.++|++++|.||+.|||||+||+|+|.+.+... .....|+|
T Consensus 159 ---~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~-~~~~~skL 234 (365)
T 2y65_A 159 ---NLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLEN-QKKLSGKL 234 (365)
T ss_dssp ---SBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTT-CCEEEEEE
T ss_pred ---CCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC-CCEEEEEE
T ss_conf ---72378879998784278899658799999999999864665235688878876399999999970588-87868999
Q ss_pred EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCC
Q ss_conf 87865898432356987610256655138799999999999718-99955789821002220148986210377339997
Q 006540 332 WMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRK-RGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCE 410 (641)
Q Consensus 332 ~lVDLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI~aL~~k-~~hIPYRdSKLT~LLqdsLgGnskT~mI~~ISP~~ 410 (641)
+|||||||||+.++++.|.+++|+.+||+||++||+||.||+++ ..||||||||||+||||+|||||+|+||+||||+.
T Consensus 235 ~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~ 314 (365)
T 2y65_A 235 YLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPAS 314 (365)
T ss_dssp EEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBG
T ss_pred EEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
T ss_conf 99979998820121895224789988888899999899998527888786635788898776138996379999846752
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 7778769999999996123134223388999
Q 006540 411 EDVGETICSLSFAKRARGIESNRELSEDLKK 441 (641)
Q Consensus 411 ~~~~ETlsTLrFA~rak~I~~~~~~~~~~~~ 441 (641)
.+++||++||+||+||+.|+|.+.+|+++..
T Consensus 315 ~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~ 345 (365)
T 2y65_A 315 FNESETKSTLDFGRRAKTVKNVVCVNEELTA 345 (365)
T ss_dssp GGHHHHHHHHHHHHHHTTCEEECCCEEECCS
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEECCCCCH
T ss_conf 7889999999999997215675411788999
No 8
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=708.60 Aligned_cols=337 Identities=36% Similarity=0.551 Sum_probs=304.6
Q ss_pred HHHHCCCCCEEEEEEECCCCCCCCC-CCCCCEEEC--CCEEEEEEC-----CCEEEEEECEEECCCCCCHHHHHHH-HHH
Q ss_conf 6323189988999982899966577-665758942--987999959-----9127998115656989803468605-999
Q 006540 96 NKILDIKGCIRVFCRVRSFLVTGRR-VIHEPVLTE--LEKVVVRSG-----GSKKEFGFDKVFNQAASQEDVFVEV-EPI 166 (641)
Q Consensus 96 n~i~~lkG~IrV~~RvRP~~~~e~~-~~~~~v~~~--~~~v~i~~~-----~~~k~F~FD~VF~~~atQ~eVf~~v-~pl 166 (641)
...++.+++|||+|||||+...|.. +...++.++ ...+.+... ...+.|.||+||+++++|++||+++ .|+
T Consensus 14 ~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~pl 93 (372)
T 3b6u_A 14 LYFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPL 93 (372)
T ss_dssp -------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHH
T ss_conf 76678999839999869899355304996389995899879997788777778438876869688674178988787777
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCEEECCCC---CCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC
Q ss_conf 999634952117721567999332513799---99994457899999997227996089998599995560332489997
Q 006540 167 LRSALDGHNVCVLAYGQTGTGKTFTMDGTS---DQPGIVPRALEELFRQAALDNSSSVTFSMSMLEVYMGSVRDLLAPKP 243 (641)
Q Consensus 167 V~svl~G~N~~IfAYGqTGSGKTyTM~G~~---~~~GIIpRai~~LF~~~~~~~~~~~~V~vS~lEIYnE~I~DLL~~~~ 243 (641)
|+++++|||+||||||||||||||||+|.. +++|||||++++||..+....++.|.|++||+|||||+|+|||++..
T Consensus 94 v~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 173 (372)
T 3b6u_A 94 VDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQ 173 (372)
T ss_dssp HHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCT
T ss_pred HHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCCC
T ss_conf 89986798135886568999998757558998344881889999999986514577369999899996788899778977
Q ss_pred CCCHHHHHCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-
Q ss_conf 4300111003660167689998685696899828957889999974320244445777898882679999999835778-
Q 006540 244 VFKAYEAATRCNLNIQTDAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCLMRITIFRHGDAL- 322 (641)
Q Consensus 244 ~~~~~~~~~~~~L~i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~- 322 (641)
. ..+.|++++.++++|.|++++.|.+++|++.++..|.++|++++|.||+.|||||+||+|+|.......
T Consensus 174 ~---------~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~ 244 (372)
T 3b6u_A 174 T---------KRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLD 244 (372)
T ss_dssp T---------CCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC----
T ss_pred C---------CCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
T ss_conf 7---------7736898799967528988999267999999999999766725455778777642999999999604778
Q ss_pred -CCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCHHHHCCCCCCCCC
Q ss_conf -770589675878658984323569876102566551387999999999997189-995578982100222014898621
Q 006540 323 -EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKR-GHVPYRNSKLTQILRDSLGDGSKV 400 (641)
Q Consensus 323 -~~~~~~skL~lVDLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI~aL~~k~-~hIPYRdSKLT~LLqdsLgGnskT 400 (641)
......|+|+|||||||||+.++++.|++++|+.+||+||++||+||.||++++ .||||||||||+||||+|||||+|
T Consensus 245 ~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt 324 (372)
T 3b6u_A 245 GENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKT 324 (372)
T ss_dssp -CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEE
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCE
T ss_conf 87626788999997988765544575154314675650649999999999863898878662208899999862999548
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 03773399977778769999999996123134223388999
Q 006540 401 LMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKK 441 (641)
Q Consensus 401 ~mI~~ISP~~~~~~ETlsTLrFA~rak~I~~~~~~~~~~~~ 441 (641)
+||+||||+..+++||++||+||+||++|++.|.+|+++..
T Consensus 325 ~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~ 365 (372)
T 3b6u_A 325 VMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKD 365 (372)
T ss_dssp EEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC----
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHH
T ss_conf 99999688524799999999999998645566625577579
No 9
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=706.85 Aligned_cols=328 Identities=35% Similarity=0.548 Sum_probs=298.2
Q ss_pred CCCEEEEEEECCCCCCCCC-CCCCCEEECC--CEEEEEEC----------CCEEEEEECEEECCCCCCHHHHHHH-HHHH
Q ss_conf 9988999982899966577-6657589429--87999959----------9127998115656989803468605-9999
Q 006540 102 KGCIRVFCRVRSFLVTGRR-VIHEPVLTEL--EKVVVRSG----------GSKKEFGFDKVFNQAASQEDVFVEV-EPIL 167 (641)
Q Consensus 102 kG~IrV~~RvRP~~~~e~~-~~~~~v~~~~--~~v~i~~~----------~~~k~F~FD~VF~~~atQ~eVf~~v-~plV 167 (641)
.++|||+|||||+...|.. +...++.+++ ..+.+... ...+.|.||+||+++++|++||+++ .|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 99869999909799133204995389984999889996045544334457785276678897997610689987899999
Q ss_pred HHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHC-CCCCEEEEEEEEEEEECCEEEECCCCCCCCC
Q ss_conf 996349521177215679993325137999999445789999999722-7996089998599995560332489997430
Q 006540 168 RSALDGHNVCVLAYGQTGTGKTFTMDGTSDQPGIVPRALEELFRQAAL-DNSSSVTFSMSMLEVYMGSVRDLLAPKPVFK 246 (641)
Q Consensus 168 ~svl~G~N~~IfAYGqTGSGKTyTM~G~~~~~GIIpRai~~LF~~~~~-~~~~~~~V~vS~lEIYnE~I~DLL~~~~~~~ 246 (641)
+++++|||+||||||||||||||||+|+.+++|||||++++||..+.. ...+.|.|.+||+|||||+|+|||.+..
T Consensus 83 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--- 159 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKNNT--- 159 (350)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTTEE---
T ss_pred HHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCCC---
T ss_conf 99857885268864689999987853587667558899999999998653687579999999992878888556776---
Q ss_pred HHHHHCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCC
Q ss_conf 0111003660167689998685696899828957889999974320244445777898882679999999835778-770
Q 006540 247 AYEAATRCNLNIQTDAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCLMRITIFRHGDAL-EAK 325 (641)
Q Consensus 247 ~~~~~~~~~L~i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~-~~~ 325 (641)
.+.+++|+.++++|.|++++.|.+++|++.++..|.++|++++|.||+.|||||+||+|+|.+..... ...
T Consensus 160 --------~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~ 231 (350)
T 2vvg_A 160 --------KLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKEV 231 (350)
T ss_dssp --------EECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----CE
T ss_pred --------CCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCC
T ss_conf --------842567489988815877997499999999999998414600145788887652999999999504678761
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEE
Q ss_conf 58967587865898432356987610256655138799999999999718999557898210022201489862103773
Q 006540 326 TEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVH 405 (641)
Q Consensus 326 ~~~skL~lVDLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI~aL~~k~~hIPYRdSKLT~LLqdsLgGnskT~mI~~ 405 (641)
...|+|+|||||||||+.++++.|++++|+.+||+||++||+||.||.++..||||||||||+||||+|||||+|+||+|
T Consensus 232 ~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~ 311 (350)
T 2vvg_A 232 IRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCAN 311 (350)
T ss_dssp EEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEE
T ss_pred EEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE
T ss_conf 78899999968988755445650778899988758999999999999738998876455888998986089962899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 39997777876999999999612313422338899
Q 006540 406 ASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 440 (641)
Q Consensus 406 ISP~~~~~~ETlsTLrFA~rak~I~~~~~~~~~~~ 440 (641)
|||+..+++||++||+||+||++|++.|.+|+++.
T Consensus 312 isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~ 346 (350)
T 2vvg_A 312 ISPASTNYDETMSTLRYADRAKQIKNKPRINEDPK 346 (350)
T ss_dssp ECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCT
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCH
T ss_conf 68840018999999999999854456661257820
No 10
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=704.73 Aligned_cols=329 Identities=34% Similarity=0.518 Sum_probs=296.0
Q ss_pred CCCEEEEEEECCCCCCCCCC-CCCCE--EECCCEEEEEECCCEEEEEECEEECCCCCCHHHHHHH-HHHHHHHHCCCCEE
Q ss_conf 99889999828999665776-65758--9429879999599127998115656989803468605-99999963495211
Q 006540 102 KGCIRVFCRVRSFLVTGRRV-IHEPV--LTELEKVVVRSGGSKKEFGFDKVFNQAASQEDVFVEV-EPILRSALDGHNVC 177 (641)
Q Consensus 102 kG~IrV~~RvRP~~~~e~~~-~~~~v--~~~~~~v~i~~~~~~k~F~FD~VF~~~atQ~eVf~~v-~plV~svl~G~N~~ 177 (641)
.|+|||+|||||+...|... ...++ ..+...+. .....+.|.||+||+++++|++||+.+ .|+|+++++|||+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~--~~~~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~t 80 (349)
T 1t5c_A 3 EGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIY--QVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGT 80 (349)
T ss_dssp CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEE--ETTSSCEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCEEE--ECCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 899799998898891564259974799958997699--779982887897989999989999999899999987488640
Q ss_pred EEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCCCCHHHHHCCCCEE
Q ss_conf 77215679993325137999999445789999999722799608999859999556033248999743001110036601
Q 006540 178 VLAYGQTGTGKTFTMDGTSDQPGIVPRALEELFRQAALDNSSSVTFSMSMLEVYMGSVRDLLAPKPVFKAYEAATRCNLN 257 (641)
Q Consensus 178 IfAYGqTGSGKTyTM~G~~~~~GIIpRai~~LF~~~~~~~~~~~~V~vS~lEIYnE~I~DLL~~~~~~~~~~~~~~~~L~ 257 (641)
|||||||||||||||+|+++++|||||++++||..+....+..|.|++||+|||||+|+|||.+... ...|.
T Consensus 81 ifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~--------~~~l~ 152 (349)
T 1t5c_A 81 IFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQK--------MKPLI 152 (349)
T ss_dssp EEEEESTTSSHHHHHTBCSSSBCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCT--------TCCEE
T ss_pred EEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCCCC--------CCCCE
T ss_conf 5621589999876874688887458899999999997476886799988999848777886678777--------87746
Q ss_pred EEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCC----CCCEEEEEEEE
Q ss_conf 67689998685696899828957889999974320244445777898882679999999835778----77058967587
Q 006540 258 IQTDAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCLMRITIFRHGDAL----EAKTEVSKLWM 333 (641)
Q Consensus 258 i~ed~~~~v~V~glt~v~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~I~i~~~~~~~----~~~~~~skL~l 333 (641)
|++|+.++++|.|++++.|.++++++.++..|.++|++++|.||..|||||+||+|.|.+..... .+....|+|+|
T Consensus 153 i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~l 232 (349)
T 1t5c_A 153 IREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNL 232 (349)
T ss_dssp EEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEE
T ss_pred EEECCCCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEE
T ss_conf 99889999874488799868999999999975233452336577888876399999999851688767676378999999
Q ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCC
Q ss_conf 8658984323569876102566551387999999999997189--99557898210022201489862103773399977
Q 006540 334 VDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKR--GHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEE 411 (641)
Q Consensus 334 VDLAGSEr~~kt~a~g~rlkE~~~INkSLsaLg~VI~aL~~k~--~hIPYRdSKLT~LLqdsLgGnskT~mI~~ISP~~~ 411 (641)
||||||||+.++++.|.+++|+.+||+||++||+||.||+.++ .||||||||||+||||+|||||+|+||+||||+
T Consensus 233 VDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~-- 310 (349)
T 1t5c_A 233 VDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV-- 310 (349)
T ss_dssp EECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--
T ss_pred EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCC--
T ss_conf 979987532214786411133547768999999999998556877777655637789999861899629999994777--
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 7787699999999961231342233889999
Q 006540 412 DVGETICSLSFAKRARGIESNRELSEDLKKR 442 (641)
Q Consensus 412 ~~~ETlsTLrFA~rak~I~~~~~~~~~~~~~ 442 (641)
+++||++||+||+||++|+|.|.+|+++...
T Consensus 311 ~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~ 341 (349)
T 1t5c_A 311 SFDETLTALQFASTAKYMKNTPYVNEVSTDE 341 (349)
T ss_dssp CSHHHHHHHHHHHHHTTCCCCCCCCEEC---
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 7899999999999974536676536678888
Done!