BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006541
(641 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SDX3|UGPA_MUSAC UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata
GN=UGPA PE=2 SV=1
Length = 467
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/428 (56%), Positives = 299/428 (69%), Gaps = 14/428 (3%)
Query: 226 IETKREIDSKDEILVVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAI 285
IE + DE+ VVPY++L+ ED+ TK LLDKL V+K NG LGT MG +GPKS I
Sbjct: 42 IEWSKIQTPTDEV-VVPYDTLSPPPEDLEATKKLLDKLAVLKLNGGLGTTMGCTGPKSVI 100
Query: 286 EVKNNLTPLDLMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSL 345
EV+N T LDL+V Q+ESLN KYGCNVPLLLMN+ THD QK++EKY+NS ++IH+ +
Sbjct: 101 EVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHDDTQKIVEKYANSNIEIHTFNQ 160
Query: 346 SQQPH--EKSFE-----GHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDS 398
SQ P + F+ GH+ KD YP H VF SLM SG LD LL QGKEY + +S
Sbjct: 161 SQYPRLVMEDFQPLPSKGHAGKDGWYPPG-HGDVFPSLMNSGKLDALLSQGKEYVFIANS 219
Query: 399 DNVAAVADPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK--- 455
DN+ A+ D KI NHLI NQ EYCMEV P D++ + G+ QL++I Q P
Sbjct: 220 DNLGAIVDIKILNHLINNQNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDAHVN 279
Query: 456 --QSGGKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQ 513
+S KFK NT ++WVNL+AIKRL++ D LK+E + KEV+ +++ TAA +AI+
Sbjct: 280 EFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIR 339
Query: 514 FFDHTIGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFE 573
FFDH IGINV +SR+LPV +TSDLLL+QSDLY +G +++N AR NP+NPSIELGPEF+
Sbjct: 340 FFDHAIGINVPRSRFLPVKATSDLLLVQSDLYMLVDGFVIRNKARTNPSNPSIELGPEFK 399
Query: 574 KVNNFQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
KV NF SRFKSIPSI+ LDSLKV GDVWFG G+ LKG VSI AK G+KLEI DG VLENK
Sbjct: 400 KVANFLSRFKSIPSIVELDSLKVSGDVWFGEGVVLKGNVSIAAKSGVKLEISDGAVLENK 459
Query: 634 EIKDVADI 641
I DI
Sbjct: 460 VINGPEDI 467
>sp|P19595|UGPA_SOLTU UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum
PE=1 SV=3
Length = 477
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/424 (56%), Positives = 307/424 (72%), Gaps = 14/424 (3%)
Query: 231 EIDSKDEILVVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNN 290
+I + + +VVPY+ LA +SED AETK LLDKLVV+K NG LGT MG +GPKS IEV+N
Sbjct: 55 KIQTPTDEVVVPYDKLAPLSEDPAETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNG 114
Query: 291 LTPLDLMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH 350
LT LDL+V Q+E+LN+K+GC+VPLLLMN+ THD K++EKY+NS +DIH+ + SQ P
Sbjct: 115 LTFLDLIVKQIEALNAKFGCSVPLLLMNSFNTHDDTLKIVEKYANSNIDIHTFNQSQYPR 174
Query: 351 --EKSF-----EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAA 403
+ F +G+S KD YP H VF SLM SG LD LL +GKEY V +SDN+ A
Sbjct: 175 LVTEDFAPLPCKGNSGKDGWYPPG-HGDVFPSLMNSGKLDALLAKGKEYVFVANSDNLGA 233
Query: 404 VADPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSG 458
+ D KI NHLI N+ EYCMEV P D++ + GK QL++I Q P + +S
Sbjct: 234 IVDLKILNHLILNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSI 293
Query: 459 GKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQFFDHT 518
KFK NT ++WVNL AIKRL++ D LK+E + KEV+ +++ TAA +AI+FFD
Sbjct: 294 EKFKIFNTNNLWVNLSAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIKFFDRA 353
Query: 519 IGINVAQSRYLPVNSTSDLLLLQSDLYT-ADEGILVQNPARDNPANPSIELGPEFEKVNN 577
IG NV +SR+LPV +TSDLLL+QSDLYT DEG +++NPAR NP+NPSIELGPEF+KV N
Sbjct: 354 IGANVPRSRFLPVKATSDLLLVQSDLYTLTDEGYVIRNPARSNPSNPSIELGPEFKKVAN 413
Query: 578 FQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENKEIKD 637
F RFKSIPSII+LDSLKV GDVWFG+G+TLKGKV++ AK G+KLEIPDG V+ NK+I
Sbjct: 414 FLGRFKSIPSIIDLDSLKVTGDVWFGSGVTLKGKVTVAAKSGVKLEIPDGAVIANKDING 473
Query: 638 VADI 641
DI
Sbjct: 474 PEDI 477
>sp|Q43772|UGPA_HORVU UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare
PE=2 SV=1
Length = 473
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/418 (56%), Positives = 297/418 (71%), Gaps = 14/418 (3%)
Query: 236 DEILVVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLD 295
DE+ VVPY++LA ED+ K LLDKLVV+K NG LGT MG +GPKS IEV+N T LD
Sbjct: 58 DEV-VVPYDTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLD 116
Query: 296 LMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH--EKS 353
L+V Q+ESLN KYGC+VPLLLMN+ THD QK++EKYSNS ++IH+ + SQ P +
Sbjct: 117 LIVIQIESLNKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTED 176
Query: 354 F-----EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPK 408
F +G + KD YP H VF SL SG LD LL QGKEY V +SDN+ A+ D K
Sbjct: 177 FLPLPSKGQTGKDGWYPPG-HGDVFPSLNNSGKLDTLLSQGKEYVFVANSDNLGAIVDIK 235
Query: 409 IFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKF 463
I NHLI NQ EYCMEV P D++ + G+ QL++I Q P + +S KFK
Sbjct: 236 ILNHLIHNQNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVDEFKSIEKFKI 295
Query: 464 INTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINV 523
NT ++WVNL+AIKRL+D + LK+E + KEV+ +++ TAA +AI+FF+ IGINV
Sbjct: 296 FNTNNLWVNLKAIKRLVDAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINV 355
Query: 524 AQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFK 583
+SR+LPV +TSDLLL+QSDLYT +G +++NPAR P+NPSIELGPEF+KV NF +RFK
Sbjct: 356 PRSRFLPVKATSDLLLVQSDLYTLVDGYVIRNPARVKPSNPSIELGPEFKKVANFLARFK 415
Query: 584 SIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENKEIKDVADI 641
SIPSI+ LDSLKV GDV FG+G+ LKG V+I AK G+KLEIPDG VLENK+I DI
Sbjct: 416 SIPSIVELDSLKVSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 473
>sp|P57751|UGPA1_ARATH UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis
thaliana GN=At5g17310 PE=2 SV=1
Length = 470
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/418 (54%), Positives = 297/418 (71%), Gaps = 14/418 (3%)
Query: 236 DEILVVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLD 295
DEI VVPY+ +A++SED +ETK LLDKLVV+K NG LGT MG +GPKS IEV++ LT LD
Sbjct: 55 DEI-VVPYDKMANVSEDASETKYLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLD 113
Query: 296 LMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPHEKSFE 355
L+V Q+E+LN+KY C VPL+LMN+ THD QK++EKY+ S VDIH+ + S+ P + E
Sbjct: 114 LIVIQIENLNNKYNCKVPLVLMNSFNTHDDTQKIVEKYTKSNVDIHTFNQSKYPRVVADE 173
Query: 356 -------GHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPK 408
G + KD YP H VF SLM SG LD L QGKEY + +SDN+ A+ D K
Sbjct: 174 FVPWPSKGKTDKDGWYPPG-HGDVFPSLMNSGKLDAFLSQGKEYVFIANSDNLGAIVDLK 232
Query: 409 IFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKF 463
I HLIQN+ EYCMEV P D++ + GK QL++I Q P + +S KFK
Sbjct: 233 ILKHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKI 292
Query: 464 INTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINV 523
NT ++WVNL+AIK+L++ D LK+E + KEV+ +++ TAA +AI+FFD+ IG+NV
Sbjct: 293 FNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNV 352
Query: 524 AQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFK 583
+SR+LPV +TSDLLL+QSDLYT +G + +N AR NP NP+IELGPEF+KV +F SRFK
Sbjct: 353 PRSRFLPVKATSDLLLVQSDLYTLVDGFVTRNKARTNPTNPAIELGPEFKKVASFLSRFK 412
Query: 584 SIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENKEIKDVADI 641
SIPSI+ LDSLKV GDVWFG+G+ LKGKV++ A G KLEIPD VLENK+I D+
Sbjct: 413 SIPSIVELDSLKVSGDVWFGSGVVLKGKVTVKANAGTKLEIPDNAVLENKDINGPEDL 470
>sp|Q9M9P3|UGPA2_ARATH Probable UTP--glucose-1-phosphate uridylyltransferase 2
OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1
Length = 469
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/418 (54%), Positives = 296/418 (70%), Gaps = 14/418 (3%)
Query: 236 DEILVVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLD 295
DEI VVPYE + +S+D+AETK LLDKLVV+K NG LGT MG +GPKS IEV++ LT LD
Sbjct: 54 DEI-VVPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLD 112
Query: 296 LMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPHEKSFE 355
L+V Q+E+LN+KYGC VPL+LMN+ THD K++EKY+NS VDIH+ + S+ P + E
Sbjct: 113 LIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADE 172
Query: 356 -------GHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPK 408
G + K+ YP H VF +LM SG LD L QGKEY V +SDN+ A+ D
Sbjct: 173 FVPWPSKGKTDKEGWYPPG-HGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLT 231
Query: 409 IFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKF 463
I HLIQN+ EYCMEV P D++ + GK QL++I Q P + +S KFK
Sbjct: 232 ILKHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKI 291
Query: 464 INTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINV 523
NT ++WVNL+AIK+L++ D LK+E + KEV+ +++ TAA +AI+FFD+ IG+NV
Sbjct: 292 FNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNV 351
Query: 524 AQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFK 583
+SR+LPV ++SDLLL+QSDLYT +G + +N AR NP+NPSIELGPEF+KV F SRFK
Sbjct: 352 PRSRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFK 411
Query: 584 SIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENKEIKDVADI 641
SIPSI+ LDSLKV GDVWFG+ I LKGKV++ AK G+KLEIPD V+ENK I D+
Sbjct: 412 SIPSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469
>sp|Q9LKG7|UGPA_ASTPN UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus
penduliflorus GN=UGP PE=2 SV=1
Length = 471
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/418 (54%), Positives = 292/418 (69%), Gaps = 14/418 (3%)
Query: 236 DEILVVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLD 295
DE+ VVPY++LA + E K LLDKLVV+K NG LGT MG +GPKS IEV++ LT LD
Sbjct: 56 DEV-VVPYDTLAPTPDGSLEIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLD 114
Query: 296 LMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH----- 350
L+V Q+E+LNSKYG NVPLLLMN+ THD Q ++EKY NS ++IH+ + SQ P
Sbjct: 115 LIVIQIENLNSKYGSNVPLLLMNSFNTHDDTQTIVEKYQNSNIEIHTFNQSQYPRLVVDD 174
Query: 351 --EKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPK 408
+G + KD YP H +F SL SG LD L+ QGKEY V +SDN+ A+ D K
Sbjct: 175 FLPLPSKGRTDKDGWYPPG-HGSMFPSLSNSGKLDALISQGKEYVFVANSDNLGAIVDLK 233
Query: 409 IFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTKQSGG-----KFKF 463
I NHL+ ++ EYCMEV P D++ + G+ QL++I Q P + G KFK
Sbjct: 234 ILNHLVAHKNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVGEFKSIEKFKI 293
Query: 464 INTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINV 523
NT ++WVNL+AIKRL++ D LK+E + KEV+ +++ TAA +AI+FFD IGINV
Sbjct: 294 FNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDKAIGINV 353
Query: 524 AQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFK 583
+SR+LPV +TSDLLL+QSDLYT + G +++N AR NP NPSIELGPEF+KV+NF RFK
Sbjct: 354 PRSRFLPVKATSDLLLVQSDLYTVENGSVIRNKARTNPENPSIELGPEFKKVSNFLGRFK 413
Query: 584 SIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENKEIKDVADI 641
SIPSI+ LDSLKV GDVWFG G+ LKGKVSIVAK G+K+EIPDG V+ NKEI D+
Sbjct: 414 SIPSIVELDSLKVVGDVWFGTGVILKGKVSIVAKSGVKVEIPDGAVIANKEINGPKDL 471
>sp|O64459|UGPA_PYRPY UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia
PE=2 SV=1
Length = 471
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/439 (53%), Positives = 302/439 (68%), Gaps = 14/439 (3%)
Query: 215 SKKGNGEKVGLIETKREIDSKDEILVVPYESLASISEDIAETKMLLDKLVVVKFNGALGT 274
S+ +GE+ +E + DE+ VVPY+ LA ED E K LLDKLVV+K NG LGT
Sbjct: 35 SRYVSGEEAQHVEWSKIQTPTDEV-VVPYDGLAPTPEDPEEIKKLLDKLVVLKLNGGLGT 93
Query: 275 NMGFSGPKSAIEVKNNLTPLDLMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYS 334
MG +GPKS IEV+N LT LDL+V Q+E+LN+KYG VPLLLMN+ THD QK++EKYS
Sbjct: 94 TMGCTGPKSVIEVRNGLTFLDLIVIQIENLNNKYGSCVPLLLMNSFNTHDDTQKIVEKYS 153
Query: 335 NSKVDIHSLSLSQQPH--EKSF-----EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLV 387
S V IH+ + SQ P + F +G + KD YP H VF SL SG LDLLL
Sbjct: 154 KSNVQIHTFNQSQYPRLVVEDFSPLPSKGQTGKDGWYPPG-HGDVFPSLKNSGKLDLLLS 212
Query: 388 QGKEYALVVDSDNVAAVADPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLV 447
QGKEY + +SDN+ AV D KI +HLIQ + EYCMEV P D++ + G+ QL+
Sbjct: 213 QGKEYVFIANSDNLGAVVDLKILHHLIQKKNEYCMEVTPKTLADVKGGTLISYEGRVQLL 272
Query: 448 DITQNPTK-----QSGGKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQII 502
+I Q P + +S KFK NT ++WVNL AIKRL++ D LK+E + KEV+ +++
Sbjct: 273 EIAQVPDQHVNEFKSIEKFKIFNTNNLWVNLNAIKRLVEADALKMEIIPNPKEVDGVKVL 332
Query: 503 SRGTAADSAIQFFDHTIGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPA 562
TAA +AI+FF+H IGINV +SR+LPV +TSDLLL+QSDLYT +G + +N AR NP
Sbjct: 333 QLETAAGAAIRFFNHAIGINVPRSRFLPVKATSDLLLVQSDLYTLQDGFVTRNSARKNPE 392
Query: 563 NPSIELGPEFEKVNNFQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKL 622
NP+IELGPEF+KV ++ SRFKSIPSI+ L+SLKV GDVWFGAG+ LKGKV+I AK G+KL
Sbjct: 393 NPTIELGPEFKKVGSYLSRFKSIPSILELESLKVSGDVWFGAGVVLKGKVTITAKSGVKL 452
Query: 623 EIPDGIVLENKEIKDVADI 641
EIPD V+ NK+I D+
Sbjct: 453 EIPDNAVIANKDINGPEDL 471
>sp|Q9GCB9|RT02_ARATH Ribosomal protein S2, mitochondrial OS=Arabidopsis thaliana GN=RPS2
PE=2 SV=1
Length = 219
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 166/206 (80%), Gaps = 5/206 (2%)
Query: 1 MTLHSIIIQKLLSTNAHLGRRVAAHHFKQYTYGFRNAMAIIDSDKTLICLRNACHFISLL 60
MT+H+ +IQKLL+T AHLGRR A HHFKQY YG RN M IIDSDKTLICLR+A HF++ L
Sbjct: 1 MTIHAAVIQKLLNTGAHLGRRAAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVANL 60
Query: 61 ARQRAAFMFVNTNPLFDEIVLQMTQKI--GCYNPN--MNALWRMGGFLTNSSSPKKFRSR 116
A R FVNTNPLFDEI+ +++I YN N MN LW+MGGFLTNS SPKKFRSR
Sbjct: 61 AHMRGNIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMN-LWKMGGFLTNSYSPKKFRSR 119
Query: 117 NKKIRFGPTKLPDCVVVLDTERKSSVIMEAAKLQVPIVALVDSSMPLDVYSKITYPVPGN 176
+KK+ FGPT +PDCVVV D+ERKSSVI+EA+KLQ+P+VA+VD ++PL+ + KITYPVP
Sbjct: 120 HKKLCFGPTTMPDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPAR 179
Query: 177 DSVQFVYLLCNMITKTFLVEQKKLGL 202
DSV+FVYL CN+ITK F+ EQ KLG+
Sbjct: 180 DSVKFVYLFCNVITKCFVAEQMKLGI 205
>sp|Q54YZ0|UGPA2_DICDI UTP--glucose-1-phosphate uridylyltransferase 2 OS=Dictyostelium
discoideum GN=ugpB PE=2 SV=1
Length = 502
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 244/407 (59%), Gaps = 14/407 (3%)
Query: 239 LVVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLMV 298
+V+ Y+ L +I+E T L KL V+K NG LGT MG +GPKS IEV++ T LDL V
Sbjct: 87 MVLNYKDLPAITEQ--RTSELASKLAVLKLNGGLGTTMGCTGPKSVIEVRSEKTFLDLSV 144
Query: 299 DQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPHEKSFEGHS 358
Q++ +N +Y VPL+LMN+ TH K+++KY S V IHS + S+ P
Sbjct: 145 QQIKEMNERYNIKVPLVLMNSFNTHQETGKIIQKYKYSDVKIHSFNQSRFPRILKDNLMP 204
Query: 359 RKDKLYPSSD------HSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPKIFNH 412
DKL+ S H VF +L SG L+ L+ +GKEY + + DN+ AV D I
Sbjct: 205 VPDKLFGSDSEWYPPGHGDVFFALQNSGLLETLINEGKEYLFISNVDNLGAVVDFNILEA 264
Query: 413 LIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTKQ-----SGGKFKFINTR 467
+ +N++EY MEV D++ + GK +L++I Q P+ + S KFK NT
Sbjct: 265 MDKNKVEYIMEVTNKTRADVKGGTLIQYEGKAKLLEIAQVPSSKVEEFKSIKKFKIFNTN 324
Query: 468 SMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQ-IISRGTAADSAIQFFDHTIGINVAQS 526
++WVNL+A+ R++ + L + + +V D + II AA +AI+FF++ G+NV +S
Sbjct: 325 NIWVNLKAMDRILKQNLLDDMDIIINPKVADGKNIIQLEIAAGAAIEFFNNARGVNVPRS 384
Query: 527 RYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFKSIP 586
R+LPV STSDL ++QS+LY+ ++G+LV N R P ++LG F+KV+++Q+R K IP
Sbjct: 385 RFLPVKSTSDLFIVQSNLYSLEKGVLVMNKNRPFTTVPLVKLGDNFKKVSDYQARIKGIP 444
Query: 587 SIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
I+ LD L V GD+ FG + LKG V IVA G +++IP+G ENK
Sbjct: 445 DILELDQLTVSGDITFGPNMVLKGTVIIVANHGSRIDIPEGSEFENK 491
>sp|Q16851|UGPA_HUMAN UTP--glucose-1-phosphate uridylyltransferase OS=Homo sapiens
GN=UGP2 PE=1 SV=5
Length = 508
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/417 (38%), Positives = 249/417 (59%), Gaps = 28/417 (6%)
Query: 240 VVPYESLAS--ISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLM 297
+ PYE + + + ++I+ +L+KLVVVK NG LGT+MG GPKS I V+N T LDL
Sbjct: 86 IQPYEKIKARGLPDNISS---VLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLT 142
Query: 298 VDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH------- 350
V Q+E LN Y +VPL+LMN+ T + +K+L+KY++ +V I++ + S+ P
Sbjct: 143 VQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLL 202
Query: 351 ----EKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVAD 406
+ S+ G + + YP H ++ S SG LD + +GKEY V + DN+ A D
Sbjct: 203 PVAKDVSYSGEN-TEAWYPPG-HGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 260
Query: 407 PKIFNHLIQ----NQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QS 457
I NHL+ + E+ MEV D++ + GK +LV+I Q P +S
Sbjct: 261 LYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKS 320
Query: 458 GGKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDD-QIISRGTAADSAIQFFD 516
KFK NT ++W++L A+KRL + + + +E ++K ++ +I TA +AI+ F+
Sbjct: 321 VSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFE 380
Query: 517 HTIGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVN 576
+++GINV +SR+LPV +TSDLLL+ S+LY+ + G L + R+ P P ++LG F KV
Sbjct: 381 NSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQ 440
Query: 577 NFQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
++ RF+SIP ++ LD L V GDV FG ++LKG V I+A G +++IP G VLENK
Sbjct: 441 DYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENK 497
>sp|O35156|UGPA_CRIGR UTP--glucose-1-phosphate uridylyltransferase OS=Cricetulus griseus
GN=UGP2 PE=2 SV=3
Length = 508
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/417 (39%), Positives = 247/417 (59%), Gaps = 28/417 (6%)
Query: 240 VVPYESLAS--ISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLM 297
+ PYE + + + ++I+ +L+KLVVVK NG LGT+MG GPKS I V+N T LDL
Sbjct: 86 IQPYEKIKARGLPDNISS---VLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLT 142
Query: 298 VDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH------- 350
V Q+E LN Y +VPL+LMN+ T + +K+L+KY++ +V I++ + S+ P
Sbjct: 143 VQQIEHLNKSYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLL 202
Query: 351 ----EKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVAD 406
+ S G S + YP H ++ S SG LD L +GKEY V + DN+ A D
Sbjct: 203 PVAKDVSSSGES-TEAWYPPG-HGDIYASFYNSGLLDTFLEEGKEYIFVSNIDNLGATVD 260
Query: 407 PKIFNHLIQ----NQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QS 457
I NHL+ + E+ MEV D++ + GK +LV+I Q P +S
Sbjct: 261 LYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKS 320
Query: 458 GGKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDD-QIISRGTAADSAIQFFD 516
KFK NT ++W++L A+KRL + + + +E + K ++ +I TA +AI+ F+
Sbjct: 321 VSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFE 380
Query: 517 HTIGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVN 576
+++GINV +SR+LPV +TSDLLL+ S+LY+ + G L + R+ P P ++LG F KV
Sbjct: 381 NSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQ 440
Query: 577 NFQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
++ RF+SIP ++ LD L V GDV FG ++LKG V I+A G +++IP G VLENK
Sbjct: 441 DYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENK 497
>sp|Q91ZJ5|UGPA_MOUSE UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus
GN=Ugp2 PE=2 SV=3
Length = 508
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/417 (38%), Positives = 248/417 (59%), Gaps = 28/417 (6%)
Query: 240 VVPYESLAS--ISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLM 297
+ PYE + + + ++I+ +L+KLVVVK NG LGT+MG GPKS I V+N T LDL
Sbjct: 86 IQPYEKIKARGLPDNISS---VLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLT 142
Query: 298 VDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH------- 350
V Q+E LN Y +VPL+LMN+ T + +K+L+KY++ +V I++ + S+ P
Sbjct: 143 VQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLL 202
Query: 351 ----EKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVAD 406
+ S+ G + + YP H ++ S SG LD + +GKEY V + DN+ A D
Sbjct: 203 PIAKDVSYSGEN-TEAWYPPG-HGDIYASFYNSGLLDTFIEEGKEYIFVSNIDNLGATVD 260
Query: 407 PKIFNHLIQ----NQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QS 457
I NHL+ + E+ MEV D++ + GK +LV+I Q P +S
Sbjct: 261 LYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKS 320
Query: 458 GGKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDD-QIISRGTAADSAIQFFD 516
KFK NT ++W++L A+KRL + + + +E + K ++ +I TA +AI+ F+
Sbjct: 321 VSKFKIFNTNNLWISLGAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFE 380
Query: 517 HTIGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVN 576
+++GINV +SR+LPV +TSDLLL+ S+LY+ + G L + R+ P P ++LG F KV
Sbjct: 381 NSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQ 440
Query: 577 NFQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
++ RF+SIP ++ LD L V GDV FG ++LKG V I+A G +++IP G VLENK
Sbjct: 441 DYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENK 497
>sp|P78811|UGPA1_SCHPO Probable UTP--glucose-1-phosphate uridylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fuy1 PE=1 SV=2
Length = 506
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 239/409 (58%), Gaps = 20/409 (4%)
Query: 240 VVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLMVD 299
VV Y++ I+E ++ L+KL V+K NG LGT MG GPKS IEV++ + LDL V
Sbjct: 90 VVEYDT---ITEAGGLSRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVRDGNSFLDLSVR 146
Query: 300 QVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQP--HEKSF--- 354
Q+E LN KY NVP +LMN+ T + KV++KY K+DI + + S+ P H+++
Sbjct: 147 QIEHLNRKYNVNVPFVLMNSFNTDEATAKVIKKYEAHKIDILTFNQSRYPRVHKETLLPV 206
Query: 355 --EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPKIFNH 412
S D+ YP H VF +L SG +D L+ QGKEY V + DN+ AV D I NH
Sbjct: 207 PHTADSAIDEWYPPG-HGDVFEALTNSGIIDTLIAQGKEYLFVSNIDNLGAVVDLNILNH 265
Query: 413 LIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTR 467
+++ EY ME+ D++ + G +L++I Q P + +S KFK+ NT
Sbjct: 266 MVETNAEYLMELTNKTKADVKGGTLIDYDGNVRLLEIAQVPPQHVEEFKSIKKFKYFNTN 325
Query: 468 SMWVNLRAIKRLIDTDELKVENFSSSKEVNDD----QIISRGTAADSAIQFFDHTIGINV 523
++W +L ++KR+++ EL +E + K + II TAA +AI+ F + G+NV
Sbjct: 326 NLWFHLPSVKRVVNNHELSMEIIPNKKTIKHKGENINIIQLETAAGAAIRHFKNAHGVNV 385
Query: 524 AQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFK 583
+ R+LPV + SDLLL++SDLY+ + G + NP R P ++LG F+KV +F +
Sbjct: 386 PRRRFLPVKTCSDLLLVKSDLYSINHGQVEMNPRRFGGTAPLVKLGAHFKKVADFSAHIP 445
Query: 584 SIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLEN 632
SIP I+ LD L + GDV G +TLKG V IVA +++IP+G VLEN
Sbjct: 446 SIPKILELDHLTITGDVNIGRNVTLKGTVIIVASDANRIDIPNGSVLEN 494
>sp|Q07130|UGPA_BOVIN UTP--glucose-1-phosphate uridylyltransferase OS=Bos taurus GN=UGP2
PE=1 SV=2
Length = 508
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 246/417 (58%), Gaps = 28/417 (6%)
Query: 240 VVPYESLAS--ISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLM 297
+ PYE + + + ++++ +L+KLVVVK NG LGT+MG GPKS I V+N T LDL
Sbjct: 86 IQPYEKIKARGLPDNVSS---VLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLT 142
Query: 298 VDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH------- 350
V Q+E LN Y +VPL+LMN+ T + +K+L+KY++ +V I++ + S+ P
Sbjct: 143 VQQIEHLNKTYDTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLL 202
Query: 351 ----EKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVAD 406
S+ G + + YP H ++ S SG LD + +GKEY V + DN+ A D
Sbjct: 203 PVAKNVSYSGEN-TEAWYPPG-HGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 260
Query: 407 PKIFNHLIQ----NQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QS 457
I NHL+ E+ MEV D++ + GK +LV+I Q P +S
Sbjct: 261 LYILNHLMNPPNGKPCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKS 320
Query: 458 GGKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDD-QIISRGTAADSAIQFFD 516
KFK NT ++W++L A+KRL + + + +E + K ++ +I TA +AI+ F+
Sbjct: 321 VSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFE 380
Query: 517 HTIGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVN 576
+++GINV +SR+LPV +TSDLLL+ S+LY+ + G L + R+ P P ++LG F KV
Sbjct: 381 NSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQ 440
Query: 577 NFQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
++ RF+SIP ++ LD L V GDV FG ++LKG V I+A G +++IP G VLENK
Sbjct: 441 DYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENK 497
>sp|P79303|UGPA_PIG UTP--glucose-1-phosphate uridylyltransferase OS=Sus scrofa GN=UGP2
PE=2 SV=3
Length = 508
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 245/417 (58%), Gaps = 28/417 (6%)
Query: 240 VVPYESLAS--ISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLM 297
+ PYE + + + ++I+ +L+KLVVVK NG LGT+MG GPKS I V+N T LDL
Sbjct: 86 IQPYEKIKARGLPDNISS---VLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLT 142
Query: 298 VDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPH------- 350
V Q+E LN Y +VPL+LMN+ T + +K+L+KY++ +V I++ + S+ P
Sbjct: 143 VQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLL 202
Query: 351 ----EKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVAD 406
+ S+ G + + YP H ++ S SG LD + +GKEY V + DN+ A D
Sbjct: 203 PVAKDVSYSGEN-TEAWYPPG-HGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 260
Query: 407 PKIFNHLIQ----NQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QS 457
I NHL+ E+ ME D++ + GK +LV+I Q P +S
Sbjct: 261 LYILNHLMNPPNGRPCEFVMEATNKARADVKGGTLTQYEGKLRLVEIAQVPKPHVDEFKS 320
Query: 458 GGKFKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDD-QIISRGTAADSAIQFFD 516
KFK NT ++W++L A+KRL + + + +E + K ++ +I TA +AI+ F+
Sbjct: 321 VSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFE 380
Query: 517 HTIGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVN 576
+++GINV +SR+LPV +TSDLLL+ S+LY+ + G L + R+ P P ++LG F KV
Sbjct: 381 NSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQ 440
Query: 577 NFQSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
++ RF+SIP ++ LD L V GDV FG ++LKG V I+ G +++IP G VLENK
Sbjct: 441 DYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIXNHGDRIDIPPGAVLENK 497
>sp|P32861|UGPA1_YEAST UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UGP1 PE=1
SV=1
Length = 499
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 242/409 (59%), Gaps = 22/409 (5%)
Query: 240 VVPYESLASISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLMVD 299
VV YE ++ E+++ L KL V+K NG LGT+MG GPKS IEV+ T LDL V
Sbjct: 85 VVKYEIISQQPENVSN----LSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVR 140
Query: 300 QVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQP--HEKSF--- 354
Q+E LN +Y +VPLLLMN+ T + +++KYS +++ I S + S+ P ++ S
Sbjct: 141 QIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPV 200
Query: 355 --EGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPKIFNH 412
E S D YP H +F SL SG LD L+ QG+E V + DN+ A D KI NH
Sbjct: 201 PTEYDSPLDAWYPPG-HGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNH 259
Query: 413 LIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQNPTK-----QSGGKFKFINTR 467
+I+ EY ME+ D++ + G+ +L+++ Q P + ++ KF NT
Sbjct: 260 MIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTN 319
Query: 468 SMWVNLRAIKRLIDTDELKVENFSSSKEVNDD----QIISRGTAADSAIQFFDHTIGINV 523
++W+NL+A+KRLI++ L++E + K + D ++ TA +AI+ FD G+ V
Sbjct: 320 NLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVV 379
Query: 524 AQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFK 583
+SR+LPV + SDLLL++SDL+ + G L +P+R P NP I+LG F+KV+ F +R
Sbjct: 380 PRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGP-NPLIKLGSHFKKVSGFNARIP 438
Query: 584 SIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLEN 632
IP I+ LD L + G+V+ G +TL+G V IV G K++IP+G +LEN
Sbjct: 439 HIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILEN 487
>sp|P08800|UGPA1_DICDI UTP--glucose-1-phosphate uridylyltransferase 1 OS=Dictyostelium
discoideum GN=uppA PE=2 SV=2
Length = 511
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 233/415 (56%), Gaps = 14/415 (3%)
Query: 231 EIDSKDEILVVPYESLASISE-DIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKN 289
EI ++ +V Y L +S D + LL+KLVV+K NG LG +MG KS +E+
Sbjct: 88 EIKIPNKTEMVDYHQLHLVSPIDQSNASRLLNKLVVIKLNGGLGNSMGCKTAKSTMEIAP 147
Query: 290 NLTPLDLMVDQVESLNSKYGCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQP 349
+T LD+ V +E +N Y +VPL++MN+ +TH+ KV+EKY KV I + S P
Sbjct: 148 GVTFLDMAVAHIEQINQDYNVDVPLVIMNSYKTHNETNKVIEKYKTHKVSIKTFQQSMFP 207
Query: 350 H---------EKSFEGHSRKDKLYPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDN 400
K + K+ P S +F SL +SG +D L GKEY + + +N
Sbjct: 208 KMYKDTLNLVPKPNTPMNPKEWYPPGSGD--IFRSLQRSGLIDEFLAAGKEYIFISNVEN 265
Query: 401 VAAVADPKIFNHLIQNQIEYCMEVAPVPSIDLRNSLINLRPGKFQLVDITQ-NPTKQSGG 459
+ ++ D ++ NH+ +IE+ +EV + D ++ K L++++Q P K
Sbjct: 266 LGSIIDLQVLNHIHLQKIEFGLEVTNRINTDSTGGILMSYKDKLHLLELSQVKPEKLKIF 325
Query: 460 K-FKFINTRSMWVNLRAIKRLIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQFFDHT 518
K FK NT ++WVNL+++ LI D+L ++ + N ++ T A IQ F ++
Sbjct: 326 KDFKLWNTNNIWVNLKSVSNLIKEDKLDLDWIVNYPLENHKAMVQLETPAGMGIQNFKNS 385
Query: 519 IGINVAQSRYLPVNSTSDLLLLQSDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNF 578
+ I V + RY P+ STS LL+ QS+++ D G + N R+ P ++LG EF V+++
Sbjct: 386 VAIFVPRDRYRPIKSTSQLLVAQSNIFQFDHGQVKLNSKREGQDVPLVKLGEEFSTVSDY 445
Query: 579 QSRFKSIPSIINLDSLKVEGDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLENK 633
+ RFKSIP ++ LD L V GDV+FG+ ITLKG V IVA G +++IPDG+VLENK
Sbjct: 446 EKRFKSIPDLLELDHLTVSGDVYFGSRITLKGTVIIVANHGERVDIPDGVVLENK 500
>sp|Q8SSC5|UGPA1_ENCCU UTP--glucose-1-phosphate uridylyltransferase OS=Encephalitozoon
cuniculi (strain GB-M1) GN=UGP1 PE=1 SV=1
Length = 492
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 221/395 (55%), Gaps = 16/395 (4%)
Query: 249 ISEDIAETKMLLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLMVDQVESLNSKY 308
I E ++K LL KL ++K NG LGT MG GPKSAI +K+ +DL+V Q+ LNSKY
Sbjct: 91 IPEPTEKSKELLRKLAILKLNGGLGTTMGCVGPKSAITIKDGKNFIDLVVKQIRYLNSKY 150
Query: 309 GCNVPLLLMNTAETHDRVQKVLEKYSNSKVDIHSLSLSQQPHEKSFE----GHSRKDK-L 363
+VPL+LMN+ T K++ +Y I S S+ P S S DK +
Sbjct: 151 KIDVPLILMNSFNTEGMTDKIIFRYDG----IKKFSQSKFPRISSETLLPVSPSHGDKGM 206
Query: 364 YPSSDHSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPKIFNHLIQNQIEYCME 423
YP H +F S+ SG L+ LL G EY V + DN+A+ D K+ + N++ + ME
Sbjct: 207 YPPG-HGDLFYSMKNSGMLEELLEGGYEYLFVSNIDNLASTVDLKLLEYFATNELGFLME 265
Query: 424 VAPVPSIDLRNSLINLRPGKFQLVDITQNPTKQ-----SGGKFKFINTRSMWVNLRAIKR 478
V D++ + G +L++I Q P+ + S KF NT ++W+NL+ +K+
Sbjct: 266 VTDKTRADVKGGTLIEYKGALRLLEIAQVPSNKKSEFTSFKKFTIFNTNNLWINLKEMKK 325
Query: 479 LIDTDELKVENFSSSKEVNDDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTSDLL 538
++ ++ + K ++D+ +I TA SAI++F ++ G+ V +SR+LPV + SDL
Sbjct: 326 KLEEGFFDLDIIENKKALDDETVIQLETAIGSAIKYFPNSCGVVVPRSRFLPVKTCSDLF 385
Query: 539 LLQSDLYTADEGILVQNPARDNPANPSIEL-GPEFEKVNNFQSRFKSIPSIINLDSLKVE 597
L++S+L+ G L +P+R P+++L G F K+ ++ FK IP I+ L+ L V
Sbjct: 386 LVESNLFVEKNGTLQLHPSRVPETCPTVKLIGENFSKIEKYEKCFKGIPDILELEVLTVS 445
Query: 598 GDVWFGAGITLKGKVSIVAKRGMKLEIPDGIVLEN 632
G+V FG + LKG V I+A K+ +PDG VLE+
Sbjct: 446 GNVLFGKNVVLKGTVIILADEKSKICVPDGSVLED 480
>sp|O59819|UGPA2_SCHPO Probable UTP--glucose-1-phosphate uridylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC794.10 PE=3 SV=1
Length = 499
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 222/391 (56%), Gaps = 21/391 (5%)
Query: 260 LDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLMVDQVESLNSKYGCNVPLLLMNT 319
L++L VVK NG +G +G + PK+ IEV++N + LDL + Q+E LN +Y +VP +LMN+
Sbjct: 100 LNRLAVVKLNGGMGNALGVNYPKAMIEVRDNQSFLDLSIRQIEYLNRRYDVSVPFILMNS 159
Query: 320 AETHDRVQKVLEKYSNSKVDIHSLSLSQQPHEKSF---------EGHSRKDKLYPSSDHS 370
+T+D KVL KY+ K+DI + S+ P + F S ++ YP H
Sbjct: 160 YDTNDETCKVLRKYAGCKIDISTFEQSRYP--RVFVDSQLPVPKAAPSPIEEWYPPG-HG 216
Query: 371 VVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPKIFNHLIQNQIEYCMEVAPVPSI 430
+F +L+ SGT++ LL QGK+Y V + DN+ A D I +H+I NQIEY ME+
Sbjct: 217 DIFDALVHSGTIERLLAQGKDYLFVSNIDNLGASVDLNILSHVIDNQIEYSMEITDKTKA 276
Query: 431 DLRNSLINLRPGKFQLVDITQNPTKQ-----SGGKFKFINTRSMWVNLRAIKRLIDTDEL 485
D++ ++ + G +L++ Q P + S FK+INT ++W+ L A+KR+++ EL
Sbjct: 277 DIKVGILVNQDGLLRLLETNQVPEQHREEFMSDKVFKYINTNNVWLYLPAVKRVVENREL 336
Query: 486 KVENFSSSKEV--NDD--QIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTSDLLLLQ 541
++ + + V N++ +II TA SAI F T GI V++ R++ V ++SDL L++
Sbjct: 337 NLDIMPNIETVYYNNEPARIIEFTTAIGSAISQFKKTEGIRVSRPRFISVKNSSDLFLVR 396
Query: 542 SDLYTADEGILVQNPARDNPANPSIELGPEFEKVNNFQSRFKSIPSIINLDSLKVEGDVW 601
DLY D G L +R P + + EF+ + R +PS+ +L SL + G+V+
Sbjct: 397 CDLYNVDHGSLKIEESRLGFPPPVVRMSNEFKDIAELFCRIPYMPSMKDLVSLSISGNVY 456
Query: 602 FGAGITLKGKVSIVAKRGMKLEIPDGIVLEN 632
FG + LKG + IVA L IP VLEN
Sbjct: 457 FGRNVILKGNIVIVASENTILCIPSNAVLEN 487
>sp|P38709|UGPA2_YEAST Probable UTP--glucose-1-phosphate uridylyltransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YHL012W PE=3 SV=1
Length = 493
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 198/392 (50%), Gaps = 21/392 (5%)
Query: 259 LLDKLVVVKFNGALGTNMGFSGPKSAIEVKNNLTPLDLMVDQVESLNSKYGCNVPLLLMN 318
LL KL ++K G +G P EVKN ++ LD++V Q ++LN +Y +VPL+ M
Sbjct: 96 LLSKLAILKLTGKANPIIGKESP--LFEVKNGMSSLDVIVRQTQNLNVRYNSDVPLIFMT 153
Query: 319 TAETHDRVQKVLEK-YSNSKVDIHSLSLSQQPH---------EKSFEGHSRKDKLYPSSD 368
+ ET +V LE+ YS+SKV ++ S P + H D YP
Sbjct: 154 SLETESQVSNFLEEHYSSSKVRWKTVVQSSFPQIDKDRLLPIDLQINSH-ENDFWYPCGT 212
Query: 369 HSVVFLSLMKSGTLDLLLVQGKEYALVVDSDNVAAVADPKIFNHLIQNQIEYCMEVAPVP 428
++ +L SG LD L+ QGKE V + DN+ A D I N +I +IEY +EV
Sbjct: 213 GNLTD-TLYFSGELDKLIAQGKEILFVSNVDNLGATGDLNILNFIINEKIEYLVEVVERT 271
Query: 429 SIDLRNSLINLRPGKFQLVDITQNPTKQSGGKFKFINTRSMWVNLRAIKRLIDTDELKVE 488
+ ++ GK + V + +S + +NT ++W++L+ +K LI+++ L +
Sbjct: 272 ANVSNTGVLATYKGKLRSV-YYNCLSNESASTCRIVNTNNIWIDLKKLKVLIESNSLNLP 330
Query: 489 NFSSSKEVN----DDQIISRGTAADSAIQFFDHTIGINVAQSRYLPVNSTSDLLLLQSDL 544
SS ++ + + + T I FF ++ + V++ R+LP+ + DL LL+S L
Sbjct: 331 IHSSESKITHKNEEIECLQFKTQLVDCIAFFPNSRVLKVSRDRFLPLRTCKDLFLLKSTL 390
Query: 545 YTADE-GILVQNPARDNPANPSIELGPEFEKVNNFQSRFKSIPSIINLDSLKVEGDVWFG 603
Y D G P + PSI+LG EF F+ IP+I+ L+ L V G+V+FG
Sbjct: 391 YDLDSNGTFNLYPLKFGLL-PSIDLGDEFATYETFKIGVPDIPNILELEHLTVMGNVFFG 449
Query: 604 AGITLKGKVSIVAKRGMKLEIPDGIVLENKEI 635
ITLKG V I+ + +PDG +LEN I
Sbjct: 450 RNITLKGTVIIICDENDVITVPDGSILENVTI 481
>sp|P26864|RT02_MARPO Ribosomal protein S2, mitochondrial OS=Marchantia polymorpha
GN=RPS2 PE=3 SV=2
Length = 237
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 135/223 (60%), Gaps = 33/223 (14%)
Query: 6 IIIQKLLSTNAHLGRRVAAHHFKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQRA 65
++IQKLLSTNA+LG R+ F+ Y YGFRN MAIID +KTLICLR C+ I + +
Sbjct: 7 LVIQKLLSTNAYLGHRIPTSDFQGYLYGFRNEMAIIDLEKTLICLRRTCNLIGSIISAKG 66
Query: 66 AFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN------------------- 106
+ VNTNP +++I+ QM +K +N W +GGFLTN
Sbjct: 67 HLLLVNTNPEYNKIIQQMAKKTN--QSYINHKW-IGGFLTNWKHMKKVKKHFQDFSAHPN 123
Query: 107 -----SSSPKKFRSRNKKIR-----FGPTKLPDCVVVLDTERKSSVIMEAAKLQVPIVAL 156
+SSP + R KK++ +PDC+V+++ + S I+EA +LQ+PIVAL
Sbjct: 124 LKDAFTSSPFDYFPRFKKMQKCFEGIMTHNIPDCLVIINANQNSMAILEANQLQIPIVAL 183
Query: 157 VDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQK 198
VDS++P ++ ITYPVP N DS++FVYL CN+ITKT ++ ++
Sbjct: 184 VDSNIPNRLHKLITYPVPVNDDSIKFVYLFCNLITKTVILSKR 226
>sp|B5YEG9|RS2_DICT6 30S ribosomal protein S2 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rpsB PE=3 SV=1
Length = 246
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 46/251 (18%)
Query: 3 LHSIIIQKLLSTNAHLGRRVA--AHHFKQYTYGFRNAMAIIDSDKTLICLRNACHFISLL 60
+ I++++LL H G + K+Y + RN + IID KTL+ L A F
Sbjct: 1 MAHILMKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQ 60
Query: 61 ARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS----------- 109
A++ F+FV T + + + ++ G + +N W +GG LTN ++
Sbjct: 61 AKEGKTFLFVGTKKQAQQTIEEEAKRCGAFY--VNQRW-LGGMLTNFTTIKSRIDYMVKL 117
Query: 110 ------------PKKFRSR-NKKIR---------FGPTKLPDCVVVLDTERKSSVIMEAA 147
PKK +R N+++ G KLPD + ++D +R+ + EA
Sbjct: 118 EELKNNGYFEKLPKKQANRLNRELEKLVKVFDGLRGIEKLPDVLYIVDPKREEIAVKEAN 177
Query: 148 KLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL----VEQKKLGL 202
KL +PI+A+VD++ ++ ITYP+PGN D+++ + L+ + I L + +K+ L
Sbjct: 178 KLGIPIIAIVDTNCDPEL---ITYPIPGNDDAIRSIKLITSKIADAILEGKDLREKEADL 234
Query: 203 LKDDEDQRERI 213
DED + I
Sbjct: 235 QLKDEDLQSEI 245
>sp|B8E2Y2|RS2_DICTD 30S ribosomal protein S2 OS=Dictyoglomus turgidum (strain Z-1310 /
DSM 6724) GN=rpsB PE=3 SV=1
Length = 246
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 46/251 (18%)
Query: 3 LHSIIIQKLLSTNAHLGRRVA--AHHFKQYTYGFRNAMAIIDSDKTLICLRNACHFISLL 60
+ I++++LL H G + K+Y + RN + IID KTL+ L A F
Sbjct: 1 MAHILMKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQ 60
Query: 61 ARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS----------- 109
A++ F+FV T + + + ++ G + +N W +GG LTN ++
Sbjct: 61 AKEGKTFLFVGTKKQAQQTIEEEAKRCGAFY--VNQRW-LGGMLTNFTTIKSRIDYMIKL 117
Query: 110 ------------PKKFRSR-NKKIR---------FGPTKLPDCVVVLDTERKSSVIMEAA 147
PKK +R N+++ G ++PD + ++D +R+ + EA
Sbjct: 118 EELKNNGYFDKLPKKQANRLNRELEKLIKVFDGLRGIERIPDVLYIVDPKREEIAVKEAN 177
Query: 148 KLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL----VEQKKLGL 202
KL +PI+A+VD++ ++ ITYP+PGN D+++ + L+ + I L + +K+ L
Sbjct: 178 KLGIPIIAIVDTNCDPEL---ITYPIPGNDDAIRSIKLITSKIADAILEGRDLREKEADL 234
Query: 203 LKDDEDQRERI 213
DED + I
Sbjct: 235 QLKDEDLQSEI 245
>sp|Q3Z9H6|RS2_DEHE1 30S ribosomal protein S2 OS=Dehalococcoides ethenogenes (strain
195) GN=rpsB PE=3 SV=1
Length = 245
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 42/229 (18%)
Query: 8 IQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQRA 65
I++LL AH G + + H K+Y + RN + IID +KT++ L AC++I+ + +
Sbjct: 6 IKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSEGG 65
Query: 66 AFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS---------------- 109
+FV T EI+ + ++ G Y +N W GG LTN S
Sbjct: 66 KVLFVGTKKQAQEILAEEAKRCGMY--FINQRW-TGGILTNFHSIQSRIDYLVRLEDQQA 122
Query: 110 -------PKKFR-------SRNKKIRFG---PTKLPDCVVVLDTERKSSVIMEAAKLQVP 152
PKK +R + G T+LPD + V+D ++ + EA ++ VP
Sbjct: 123 RGDFNRLPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKIAMAEAKRMGVP 182
Query: 153 IVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQKKL 200
+VA+VD++ D ++ YP+P N D+++ + L+C+ + + + Q L
Sbjct: 183 LVAMVDTNCNPD---EVDYPIPSNDDAMRAIKLICSKMADSVIEAQNAL 228
>sp|O67809|RS2_AQUAE 30S ribosomal protein S2 OS=Aquifex aeolicus (strain VF5) GN=rpsB
PE=3 SV=1
Length = 274
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 42/223 (18%)
Query: 8 IQKLLSTNAHLGRRVAAHHFKQ--YTYGFRNAMAIIDSDKTLICLRNACHFISLLARQRA 65
+++LL H G + + K Y YG R+ + IID +KT++ L +A HF+S + Q
Sbjct: 6 MKELLEAGVHFGHSKSRWNPKMAPYIYGVRHGIHIIDLNKTIVMLEDAYHFVSDVIAQGG 65
Query: 66 AFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS---------------- 109
+FV T +I+ + ++ G + +N W +GG LTN +
Sbjct: 66 EILFVGTKKQAKDIIKEEAERCGAF--YVNERW-VGGLLTNFQTVRKSIMKLQTLERMEE 122
Query: 110 -------PKK----FRSRNKKIR------FGPTKLPDCVVVLDTERKSSVIMEAAKLQVP 152
PKK R + +K+R KLPD + ++DT R+ + EA KL +P
Sbjct: 123 DGIFDVLPKKEVRNLRRKMEKLRKLYNGIRDMKKLPDVIWIVDTVREKIAVSEARKLGIP 182
Query: 153 IVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
IVA+ DS+ V I Y +PGN D+++ + LL + I L
Sbjct: 183 IVAIADSNCDPTV---IDYTIPGNDDAIKSIKLLTSKIADAVL 222
>sp|Q3ZZC1|RS2_DEHSC 30S ribosomal protein S2 OS=Dehalococcoides sp. (strain CBDB1)
GN=rpsB PE=3 SV=1
Length = 245
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 42/229 (18%)
Query: 8 IQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQRA 65
I++LL AH G + + H K+Y + RN + IID +KT++ L AC++I+ +
Sbjct: 6 IKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSDGG 65
Query: 66 AFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS---------------- 109
+FV T EI+ + ++ G Y +N W GG LTN S
Sbjct: 66 KVLFVGTKKQAQEILAEEAKRCGMY--FINQRW-TGGILTNFHSIQSRIDYLVRLEDQQA 122
Query: 110 -------PKKFR-------SRNKKIRFG---PTKLPDCVVVLDTERKSSVIMEAAKLQVP 152
PKK +R + G T+LPD + V+D ++ + EA ++ VP
Sbjct: 123 RGDFSRLPKKEAQKLGEEIARLNRTMGGFKEMTRLPDVIFVVDPIKEKIAMAEAKRMGVP 182
Query: 153 IVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQKKL 200
+VA+VD++ D ++ YPVP N D+++ + L+C+ + + Q +
Sbjct: 183 LVAMVDTNCNPD---EVDYPVPSNDDAMRAIKLICSKMADAVIEAQNAM 228
>sp|A5FS79|RS2_DEHSB 30S ribosomal protein S2 OS=Dehalococcoides sp. (strain BAV1)
GN=rpsB PE=3 SV=1
Length = 245
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 42/229 (18%)
Query: 8 IQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQRA 65
I++LL AH G + + H K+Y + RN + IID +KT++ L AC++I+ +
Sbjct: 6 IKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSDGG 65
Query: 66 AFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS---------------- 109
+FV T EI+ + ++ G Y +N W GG LTN S
Sbjct: 66 KVLFVGTKKQAQEILAEEAKRCGMY--FINQRW-TGGILTNFHSIQSRIDYLVRLEDQQA 122
Query: 110 -------PKKFR-------SRNKKIRFG---PTKLPDCVVVLDTERKSSVIMEAAKLQVP 152
PKK +R + G T+LPD + V+D ++ + EA ++ VP
Sbjct: 123 RGDFSRLPKKEAQKLGEEIARLNRTMGGFKEMTRLPDVIFVVDPIKEKIAMAEAKRMGVP 182
Query: 153 IVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQKKL 200
+VA+VD++ D ++ YPVP N D+++ + L+C+ + + Q +
Sbjct: 183 LVAMVDTNCNPD---EVDYPVPSNDDAMRAIKLICSKMADAVIEAQNAM 228
>sp|Q924T2|RT02_MOUSE 28S ribosomal protein S2, mitochondrial OS=Mus musculus GN=Mrps2
PE=2 SV=1
Length = 291
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 8 IQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQRA 65
++ L HLG + H + Y +G R IID D+T + L+ A +F + +A ++
Sbjct: 78 VKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKG 137
Query: 66 AFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSSPKKFRSRNKKIRFGPT 125
+FV+ N F ++ Q G Y + + GG LTN+ ++ FGP+
Sbjct: 138 IILFVSRNRQFSHLIETTAQACGEY---AHTRYFKGGLLTNA-----------QLLFGPS 183
Query: 126 -KLPDCVVVLDT----ERKSSVIMEAAKLQVPIVALVDSSMPLDVYSKITYPVPGN-DSV 179
+LPD ++ L T + +AAK+ +P V +VD++ + ITYP+PGN DS
Sbjct: 184 VRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVDTNCNPCL---ITYPIPGNDDSP 240
Query: 180 QFVYLLCNMITKTFLVEQKKLGLLKDDEDQRERIDSKKGN 219
Q + L C + T ++K + + R+ S KG+
Sbjct: 241 QAIQLFCKLFRTTINRAKEK----RRQMEALHRLQSPKGS 276
>sp|B2IGT0|RS2_BEII9 30S ribosomal protein S2 OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rpsB PE=3
SV=2
Length = 336
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 1 MTLHSIIIQKLLSTNAHLGRRVAAHHF----KQYTYGFRNAMAIIDSDKTLICLRNACHF 56
M+L ++ LL + AH G + AH + Y +G RN + IID +T+ L A
Sbjct: 1 MSLPEFSMRGLLESGAHFGHQ--AHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKA 58
Query: 57 ISLLARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKK 112
IS + +FV T E + Q+ Y +N+ W +GG LTN S+S ++
Sbjct: 59 ISDTVARGGRVLFVGTKRQAQEAIADAAQRSAQYY--VNSRW-LGGMLTNWKTISASIQR 115
Query: 113 FRSRNKKIRFGPTKL----------------------------PDCVVVLDTERKSSVIM 144
R ++ + G L PD + V+DT ++ I
Sbjct: 116 LRKLDEILASGAGGLTKKERLMMSRERDKLEKALGGIKDMGGVPDLIFVIDTNKEQLAIQ 175
Query: 145 EAAKLQVPIVALVDSSMPLDVYSKITYPVPGNDSV-QFVYLLCNMITKTFL 194
EA +L +P+ A++D++ D ITYP+PGND + + L C++I + L
Sbjct: 176 EAERLHIPVAAILDTNCDPD---GITYPIPGNDDAGRAISLYCDLIARAAL 223
>sp|B7IHT3|RS2_THEAB 30S ribosomal protein S2 OS=Thermosipho africanus (strain TCF52B)
GN=rpsB PE=3 SV=1
Length = 259
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 42/225 (18%)
Query: 6 IIIQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQ 63
+ +++LL H G R + K+Y +G R + IID KT L A +F+ A +
Sbjct: 4 LTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLDEAYNFVRDKAAE 63
Query: 64 RAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS-------------- 109
+FV T +++ Q ++ G + +N W +GG LTN +
Sbjct: 64 GGTILFVGTKKQAQQVIKQEAERCGAF--YVNHRW-LGGLLTNFETIRKRIDKLIELEEM 120
Query: 110 ---------PKKFRSRNKKI------RFGP----TKLPDCVVVLDTERKSSVIMEAAKLQ 150
PKK +SR ++I G T LPD + ++D ++ + + EA L+
Sbjct: 121 EANGEFDHLPKKEQSRLRRILEKLRKNLGGLKNMTSLPDVIYIVDPRKERNAVYEANLLK 180
Query: 151 VPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
+P VA+VD++ D +I Y +PGN D+++ + L+ + I +L
Sbjct: 181 IPTVAIVDTNCDPD---EIDYIIPGNDDAIRAIQLITSKIADAYL 222
>sp|Q73K75|RS2_TREDE 30S ribosomal protein S2 OS=Treponema denticola (strain ATCC 35405
/ CIP 103919 / DSM 14222) GN=rpsB PE=3 SV=1
Length = 291
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 47/244 (19%)
Query: 6 IIIQKLLSTNAHLGRRVAAH--HFKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQ 63
+ ++ LL + H G +V K+Y + RN + IID KT++ +R A + +
Sbjct: 4 VTMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKTTSE 63
Query: 64 RAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSSPKKFRSRNKKIR-- 121
+ +FV T + + + ++ G + +N W +GG LTN S+ KK +R KKI
Sbjct: 64 GKSVLFVGTKKQAQQTIQKEAERCGMF--YINNRW-LGGMLTNFSTIKKSLARLKKIEKM 120
Query: 122 ---------------------------FGPTK----LPDCVVVLDTERKSSVIMEAAKLQ 150
G K LP + ++DT ++ I EA L
Sbjct: 121 EVDGTFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLG 180
Query: 151 VPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQKKLGL-----LK 204
+PI+A+VD++ + I YP+PGN D+++ + L +I + + GL L+
Sbjct: 181 IPIIAVVDTNCNPE---GIDYPIPGNDDAIRAISLFTGVIANAVIEADNEHGLKIIENLQ 237
Query: 205 DDED 208
+DE+
Sbjct: 238 EDEE 241
>sp|Q1IU82|RS2_KORVE 30S ribosomal protein S2 OS=Koribacter versatilis (strain Ellin345)
GN=rpsB PE=3 SV=1
Length = 301
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 42/224 (18%)
Query: 3 LHSIIIQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLL 60
+ +I +++LL H G + + K+Y +G RN + IID KTL + A F+S +
Sbjct: 1 MANITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVSDV 60
Query: 61 ARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSSPKKFRSRNKKI 120
A + +FV T + + + ++ G + +N W +GG LTN + +K R K++
Sbjct: 61 AAEGKLVLFVGTKRQAQDAIAEEAKRCGMF--YINQRW-LGGLLTNWVTVQKSVKRLKEL 117
Query: 121 RFGPT---------------------------------KLPDCVVVLDTERKSSVIMEAA 147
T +LPDC+ V+D+ ++ + EA
Sbjct: 118 DEMATDGRYELLPKKEVIKLERERKHLQANLAGIKNLNRLPDCLFVIDSNKEQIAVKEAR 177
Query: 148 KLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMIT 190
KL +P+VA+VD++ S++ Y +PGN D+++ + L + I
Sbjct: 178 KLGIPVVAVVDTNCD---PSEVDYVIPGNDDALRAIRLFASKIA 218
>sp|P35014|RR2_GALSU 30S ribosomal protein S2, chloroplastic OS=Galdieria sulphuraria
GN=rps2 PE=3 SV=1
Length = 233
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 49/244 (20%)
Query: 1 MTLHSIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFIS 58
MT + + +LL+ HLG R + K + Y RN + IID +T L AC ++
Sbjct: 1 MTTSVVTLSELLAARVHLGHRFNKWNPKMVSFIYAERNKVHIIDLVQTAFLLGEACDYVK 60
Query: 59 LLARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN------------ 106
LLA++ F+FV T + I+ + ++ C + +N W +GG LTN
Sbjct: 61 LLAKKGKKFLFVGTRQELNTILAEEAER--CNSFYINQRW-LGGLLTNWVTIKSRVQALE 117
Query: 107 --------SSSPKKFRSRNKK-----------IRFGPTKLPDCVVVLDTERKSSVIMEAA 147
+S PKK +R KK IR T LPD V+++D + + + E
Sbjct: 118 KKESEGFFNSLPKKESARLKKELDKLRRYFNGIRKMNT-LPDVVIIIDQRKDLTAVQECN 176
Query: 148 KLQVPIVALVDSSMPLDVYSKITYPVPGNDSVQFVYLLCNMITKTFLVEQKKLGLLKDDE 207
KL +P + +VD++ D+ + P+P ND + I L+ K + +K+ +
Sbjct: 177 KLNIPTICIVDTNCNPDI---VDLPIPAND---------DAICSVKLILGKLVDFIKEGQ 224
Query: 208 DQRE 211
+RE
Sbjct: 225 IERE 228
>sp|Q98MB2|RS2_RHILO 30S ribosomal protein S2 OS=Rhizobium loti (strain MAFF303099)
GN=rpsB PE=3 SV=1
Length = 260
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 41/229 (17%)
Query: 1 MTLHSIIIQKLLSTNAHLGRRVAAHHFKQ--YTYGFRNAMAIIDSDKTLICLRNACHFIS 58
M L +++LL H G + + K Y YG RN + IID +T+ L A +S
Sbjct: 1 MALPDFSMRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVS 60
Query: 59 LLARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFR 114
+ +FV T +IV Q+ Y +N+ W +GG LTN S+S ++ R
Sbjct: 61 DTVAKGGRVLFVGTKRQASDIVADAAQRSAQYY--VNSRW-LGGMLTNWKTISNSIQRLR 117
Query: 115 SRN-----------KKIRF-------------GPTK----LPDCVVVLDTERKSSVIMEA 146
+ KK R G K PD + V+DT +++ I+EA
Sbjct: 118 KLDEMLAGEAQGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAIAILEA 177
Query: 147 AKLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
+L +P+VA++DS+ D KI +P+PGN D+ + + L C++I K +
Sbjct: 178 KRLGIPVVAIIDSNCDPD---KIDFPIPGNDDAARAIQLYCDLIAKAAI 223
>sp|A4TC67|RS2_MYCGI 30S ribosomal protein S2 OS=Mycobacterium gilvum (strain PYR-GCK)
GN=rpsB PE=3 SV=1
Length = 279
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 44/222 (19%)
Query: 6 IIIQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQ 63
+ +++LL + AH G + + K++ + RN + IID +TL + +A F+
Sbjct: 4 VTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDSAYEFVKETVAH 63
Query: 64 RAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSSPKK----------- 112
+ MFV T E + Q ++G P +N W +GG LTN + K
Sbjct: 64 GGSIMFVGTKKQAQESIAQEATRVGM--PYVNQRW-LGGMLTNFQTVHKRLQRMKELEAM 120
Query: 113 -----FRSRNKK------------------IRFGPTKLPDCVVVLDTERKSSVIMEAAKL 149
F R KK IR K+P + V+DT ++ + EA KL
Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIR-DMAKVPSAIWVVDTNKEHLAVAEARKL 179
Query: 150 QVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMIT 190
+PI+A++D++ DV + YP+PGN D+++ LL +I
Sbjct: 180 NIPIIAILDTNCDPDV---VDYPIPGNDDAIRSAALLTKVIA 218
>sp|A5GLE0|RS2_SYNPW 30S ribosomal protein S2 OS=Synechococcus sp. (strain WH7803)
GN=rpsB PE=3 SV=1
Length = 239
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 45/216 (20%)
Query: 6 IIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQ 63
+ + +++ AH G + + K +Y Y RN + IID +T +C+ NA ++ AR
Sbjct: 4 VTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARS 63
Query: 64 RAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSSPKKFRSRNK----- 118
F+FV T E+V Q + + C +N W +GG LTN ++ K R K
Sbjct: 64 GKRFLFVGTKKQASEVVAQ--EALRCGGSYVNQRW-LGGMLTNWTTMKARIDRLKDLERM 120
Query: 119 ----KIRFGPTK------------------------LPDCVVVLDTERKSSVIMEAAKLQ 150
I P K LPD VV++D R+++ ++EA KL
Sbjct: 121 EASGAIAMRPKKEGAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLD 180
Query: 151 VPIVALVDSSMPLDVYSKITYPVPGND----SVQFV 182
+P+V+++D++ D+ P+P ND SVQ V
Sbjct: 181 IPLVSMLDTNCDPDL---CEVPIPCNDDAVRSVQLV 213
>sp|A8F0I9|RS2_RICM5 30S ribosomal protein S2 OS=Rickettsia massiliae (strain Mtu5)
GN=rpsB PE=3 SV=2
Length = 295
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I++LL H G + + + K Y YG R+ + IID +++ + A + I +
Sbjct: 6 SVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRSRNK 118
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLDK 122
Query: 119 KIR-----FGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
+ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVDYPIPGNDDSIRSIRLYCSLFADAAL 226
>sp|A8EXF0|RS2_RICCK 30S ribosomal protein S2 OS=Rickettsia canadensis (strain McKiel)
GN=rpsB PE=3 SV=1
Length = 295
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I++LL H G + + + K Y YG R+ + IID ++ + + A + I +
Sbjct: 6 SVNIKELLDAGVHFGHKTSRWNPKMGSYIYGERDDVHIIDLRQSAVLMSVALNAIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRS--- 115
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLEK 122
Query: 116 --RNKKIRFGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
N++ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLGNEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVDYPIPGNDDSIRSIRLYCSLFADAAL 226
>sp|A8GQP7|RS2_RICRS 30S ribosomal protein S2 OS=Rickettsia rickettsii (strain Sheila
Smith) GN=rpsB PE=3 SV=1
Length = 295
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I+ LL H G + + + K Y YG R+ + IID +++ + A + I +
Sbjct: 6 SVNIKALLDAGVHFGHKTSRWNPKMASYIYGKRDDVHIIDLRQSVALMNVALNAIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRSRNK 118
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLDK 122
Query: 119 KIR-----FGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
+ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVDYPIPGNDDSIRSIRLYCSLFADAAL 226
>sp|B0BW38|RS2_RICRO 30S ribosomal protein S2 OS=Rickettsia rickettsii (strain Iowa)
GN=rpsB PE=3 SV=1
Length = 295
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I+ LL H G + + + K Y YG R+ + IID +++ + A + I +
Sbjct: 6 SVNIKALLDAGVHFGHKTSRWNPKMASYIYGKRDDVHIIDLRQSVALMNVALNAIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRSRNK 118
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLDK 122
Query: 119 KIR-----FGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
+ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVDYPIPGNDDSIRSIRLYCSLFADAAL 226
>sp|Q5GRH8|RS2_WOLTR 30S ribosomal protein S2 OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=rpsB PE=3 SV=1
Length = 284
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 122/265 (46%), Gaps = 55/265 (20%)
Query: 3 LHSIIIQKLLSTNAHLGRRVAAHHFKQ--YTYGFR--NAMAIIDSDKTLICLRNACHFIS 58
L + ++ L + H G +++ + K Y YG N + IID KTL L+ A +
Sbjct: 6 LPEVTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMKVLY 65
Query: 59 LLARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPK--- 111
+A Q +FV T F + + ++ I C +N W +GG LTN SSS K
Sbjct: 66 NVAFQGGRILFVGTK--FQALDIIASEAIRCGQYYVNYRW-LGGMLTNWGTISSSIKTLV 122
Query: 112 ----------------------KFRSRNKKIRFGPTKL---PDCVVVLDTERKSSVIMEA 146
K R + K G ++ PD + ++DT ++ + EA
Sbjct: 123 QYEKVLNAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDTNKEHIAVKEA 182
Query: 147 AKLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQK------- 198
KL++P+VA++D++ D ITYP+PGN DS + + L C + + L +
Sbjct: 183 EKLEIPVVAILDTNSDPD---GITYPIPGNDDSRKSIELYCRLAADSILAGMESSLARSG 239
Query: 199 -KLGLLKDDEDQRERIDS----KKG 218
K+G +KD+E +E+ DS KKG
Sbjct: 240 VKVGDIKDEEFIQEKGDSIIRTKKG 264
>sp|Q4UND8|RS2_RICFE 30S ribosomal protein S2 OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=rpsB PE=3 SV=1
Length = 295
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I++LL H G + + + K Y YG R+ + IID ++ + A + I +
Sbjct: 6 SVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNTIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRS--- 115
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLEK 122
Query: 116 --RNKKIRFGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
N++ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLENEEALMGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVNYPIPGNDDSIRSIRLYCSLFADAAL 226
>sp|Q92JF5|RS2_RICCN 30S ribosomal protein S2 OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=rpsB PE=3 SV=1
Length = 295
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I+ LL H G + + + K Y YG R+ + IID +++ + A + I +
Sbjct: 6 SVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRSRNK 118
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLDK 122
Query: 119 KIR-----FGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
+ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLENEEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVDYPIPGNDDSIRAIRLYCSLFADAAL 226
>sp|C3PMC2|RS2_RICAE 30S ribosomal protein S2 OS=Rickettsia africae (strain ESF-5)
GN=rpsB PE=3 SV=1
Length = 295
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I+ LL H G + + + K Y YG R+ + IID +++ + A + I +
Sbjct: 6 SVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRSRNK 118
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLDK 122
Query: 119 KIR-----FGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
+ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLENEEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVDYPIPGNDDSIRSIRLYCSLFADAAL 226
>sp|C4K1A0|RS2_RICPU 30S ribosomal protein S2 OS=Rickettsia peacockii (strain Rustic)
GN=rpsB PE=3 SV=1
Length = 295
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 5 SIIIQKLLSTNAHLGRRVAAHHFK--QYTYGFRNAMAIIDSDKTLICLRNACHFISLLAR 62
S+ I+ LL H G + + + K Y YG R+ + IID +++ + A + I +
Sbjct: 6 SVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVK 65
Query: 63 QRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFRSRNK 118
+ +FV+T +I+ + +K G Y +N W +GG LTN + S +K +K
Sbjct: 66 KDGKILFVSTKIQASDIIAEYAEKCGQYY--VNHRW-LGGMLTNWKTIAGSIEKLNKLDK 122
Query: 119 KIR-----FGPTKL-------------------------PDCVVVLDTERKSSVIMEAAK 148
+ G TK PD +VV+DT ++ I EA K
Sbjct: 123 TLENEEALMGYTKKEILYMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVK 182
Query: 149 LQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
L VPIVA+VD++ D + YP+PGN DS++ + L C++ L
Sbjct: 183 LNVPIVAVVDTNSNPD---NVDYPIPGNDDSIRSIRLYCSLFADAAL 226
>sp|Q1IZI6|RS2_DEIGD 30S ribosomal protein S2 OS=Deinococcus geothermalis (strain DSM
11300) GN=rpsB PE=3 SV=1
Length = 264
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 43/235 (18%)
Query: 3 LHSIIIQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLL 60
+ I +++LL H G + FK++ + RN + IID KTL + + +I L
Sbjct: 1 MSYISMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQIDRSFDYIKDL 60
Query: 61 ARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN-------------- 106
A + +FV T EIV ++ G P + + W +GG LTN
Sbjct: 61 AERGGVILFVGTKKQAQEIVELEARRTGM--PYVTSRW-LGGMLTNFRTIRTRIDRLNEL 117
Query: 107 ---------SSSPKKFR-----SRNKKIRF-----GPTKLPDCVVVLDTERKSSVIMEAA 147
+ PK R R + +RF T+LPD + V+D ++ + EA
Sbjct: 118 DDMFESGRVNDRPKAERIELAAERERLLRFVGGIRKMTRLPDAIFVVDPTKEVIAVQEAN 177
Query: 148 KLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQKKLG 201
KL +P++AL D+ DV I Y VPGN D+++ + L+ + I +VE + G
Sbjct: 178 KLGIPVIALADTDSDPDV---IDYIVPGNDDAIRSIQLITHRIGD-LIVEARGGG 228
>sp|B6ISV1|RS2_RHOCS 30S ribosomal protein S2 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rpsB PE=3 SV=1
Length = 261
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 52/235 (22%)
Query: 1 MTLHSIIIQKLLSTNAHLGRRVAAHHFKQ-------YTYGFRNAMAIIDSDKTLICLRNA 53
M + + +++LL H G HH ++ Y +G RN + IID ++++ + A
Sbjct: 1 MAIPTFTMRQLLEAGVHFG-----HHTRRWNPKMAPYLFGVRNGVHIIDLEQSVPMMYRA 55
Query: 54 CHFISLLARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSS 109
+ + +FV T E V + ++ G Y +N W +GG LTN S S
Sbjct: 56 MQAVRDVVAGGGRVLFVGTKRAAQEKVAESAKRCGQYY--VNHRW-LGGMLTNWKTISQS 112
Query: 110 PKKFRSRNKKIRFGPTK-----------------------------LPDCVVVLDTERKS 140
++ + ++++ G LPD + ++DT ++S
Sbjct: 113 IRRLKEMDEQLAVGEQSGRTKKELLNMTREREKLERALGGIRDMGGLPDLLFIIDTNKES 172
Query: 141 SVIMEAAKLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
I EA KL +P+VA+VDS+ D +T+PVPGN D+++ + C +I L
Sbjct: 173 LAIQEANKLGIPVVAVVDSNSDPD---GVTFPVPGNDDALRAIDTYCELIAGAVL 224
>sp|A6LLI6|RS2_THEM4 30S ribosomal protein S2 OS=Thermosipho melanesiensis (strain BI429
/ DSM 12029) GN=rpsB PE=3 SV=1
Length = 257
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 42/225 (18%)
Query: 6 IIIQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQ 63
+ +++LL H G R + K+Y +G R + IID KT L A +F+ A +
Sbjct: 4 VTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLEEAYNFVRDKAAE 63
Query: 64 RAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSS-------------- 109
+FV T +++ Q ++ G + +N W +GG LTN +
Sbjct: 64 GGTILFVGTKKQAQQVIKQEAERCGAF--YVNHRW-LGGLLTNFQTIRKRIDKLIELEEM 120
Query: 110 ---------PKKFRSRNKKI------RFGPTK----LPDCVVVLDTERKSSVIMEAAKLQ 150
PKK +SR ++I G K +PD + ++D ++ + + EA L+
Sbjct: 121 EANGEFDNLPKKEQSRLRRILDKLRKNLGGLKEMDRIPDVIYIVDPRKERNAVYEANLLK 180
Query: 151 VPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL 194
+P V++VD++ D +I Y +PGN D+++ + L+ + I +L
Sbjct: 181 IPTVSIVDTNCDPD---EIDYIIPGNDDAIRAIQLITSKIADAYL 222
>sp|B8FGE6|RS2_DESAA 30S ribosomal protein S2 OS=Desulfatibacillum alkenivorans (strain
AK-01) GN=rpsB PE=3 SV=1
Length = 294
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 43/245 (17%)
Query: 6 IIIQKLLSTNAHLGRRVAAHH--FKQYTYGFRNAMAIIDSDKTLICLRNACHFISLLARQ 63
I +++LL H G + + K Y +G RN + I+D KT+ R AC F+S +
Sbjct: 4 ISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIVDLQKTVRMFRTACEFVSDVVAN 63
Query: 64 RAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTNSSSPKKFRSR------- 116
+ +FV T E V + + Y ++ W +GG LTN + KK R
Sbjct: 64 GGSVLFVGTKKQAREAVYEEANRAEAY--YVHNRW-LGGMLTNFQTIKKGIDRLNYLNEI 120
Query: 117 --NKKIRFGP------------------------TKLPDCVVVLDTERKSSVIMEAAKLQ 150
N+ I P TKLP + ++D + ++ + EA +L
Sbjct: 121 KLNETINLFPKKERLKLEKERVKLDANLGGIRTMTKLPSVIFIIDPKNEAIAVREAKRLN 180
Query: 151 VPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFLVEQKKLGLLKDDEDQ 209
+P VA+VD++ D I Y +PGN D+++ + LL + I + +V+ K++ + +Q
Sbjct: 181 IPTVAVVDTNCDPD---DIDYVIPGNDDAIRAIRLLTSRIAEA-VVQGKQIAAERRAAEQ 236
Query: 210 RERID 214
+ D
Sbjct: 237 DKAAD 241
>sp|Q11IJ8|RS2_MESSB 30S ribosomal protein S2 OS=Mesorhizobium sp. (strain BNC1) GN=rpsB
PE=3 SV=1
Length = 267
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 45/241 (18%)
Query: 1 MTLHSIIIQKLLSTNAHLGRRVAAHHFKQ--YTYGFRNAMAIIDSDKTLICLRNACHFIS 58
M L +++LL H G + + K Y +G RN + IID +T+ L A +S
Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMTPYIFGERNNIHIIDLSQTVPLLHQALKVVS 60
Query: 59 LLARQRAAFMFVNTNPLFDEIVLQMTQKIGCYNPNMNALWRMGGFLTN----SSSPKKFR 114
+ +FV T +IV ++ Y +N+ W +GG LTN S+S ++ R
Sbjct: 61 DTVGRGGRLLFVGTKRQASDIVADAARRSAQYY--VNSRW-LGGMLTNWKTISNSIQRLR 117
Query: 115 SRNKKI---RFGPTK-------------------------LPDCVVVLDTERKSSVIMEA 146
++ + G TK PD + V+DT +++ + EA
Sbjct: 118 RLDEMLSSENLGLTKKERLNLERERDKLERALGGIRDMGSTPDMMFVIDTNKEAIAVQEA 177
Query: 147 AKLQVPIVALVDSSMPLDVYSKITYPVPGN-DSVQFVYLLCNMITKTFL----VEQKKLG 201
+L +P++A++DS+ DV + YP+PGN D+ + + L C++I K + +Q LG
Sbjct: 178 RRLGIPVIAVIDSNCDPDV---VDYPIPGNDDAARAIALYCDLIAKAAIDGIERQQGSLG 234
Query: 202 L 202
+
Sbjct: 235 V 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,372,097
Number of Sequences: 539616
Number of extensions: 9531423
Number of successful extensions: 28373
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 404
Number of HSP's that attempted gapping in prelim test: 26660
Number of HSP's gapped (non-prelim): 1733
length of query: 641
length of database: 191,569,459
effective HSP length: 124
effective length of query: 517
effective length of database: 124,657,075
effective search space: 64447707775
effective search space used: 64447707775
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)