Your job contains 1 sequence.
>006546
MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDE
IGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGS
QGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLR
WLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSM
MLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGKTKSLQALALDANLSSSSPPFSGVY
NQNNPMVVRGSSLPSESISPRTPLNVVPDSYWEGKWRDLHKAEEQRHDSSGKQNQTQKKR
WLEKVKLRLSRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKDGILEVST
EKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVSGANDNENDS
EKSSVASNSSVDENDRQSHTMPESPPLPVSQTPDDIVKDSQSNNDSLEKSQTVRKVLSGK
FQWFWKFGRNSAGEETSEKGGVATETKISANNESNQSNSKGASSNDGSCKSSSSSKGETV
DQNVMGTLKNLGQSMLEHIQVTFSFCTLICMFENTSLLKNI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006546
(641 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123859 - symbol:AT4G29950 species:3702 "Arabi... 1305 3.8e-133 1
TAIR|locus:2047600 - symbol:AT2G19240 species:3702 "Arabi... 1168 8.7e-132 2
TAIR|locus:2165625 - symbol:AT5G57210 species:3702 "Arabi... 1120 5.8e-122 2
UNIPROTKB|F1LXN2 - symbol:Tbc1d5 "Protein Tbc1d5" species... 203 3.4e-19 5
RGD|1561626 - symbol:Tbc1d5 "TBC1 domain family, member 5... 203 3.7e-19 5
UNIPROTKB|E1BRI4 - symbol:TBC1D5 "Uncharacterized protein... 199 2.9e-18 5
MGI|MGI:1919488 - symbol:Tbc1d5 "TBC1 domain family, memb... 203 7.6e-18 4
UNIPROTKB|F1N3C5 - symbol:TBC1D5 "Uncharacterized protein... 192 4.3e-17 6
UNIPROTKB|Q92609 - symbol:TBC1D5 "TBC1 domain family memb... 202 5.6e-16 4
UNIPROTKB|F1RS74 - symbol:TBC1D5 "Uncharacterized protein... 201 7.9e-16 4
UNIPROTKB|F1RS65 - symbol:TBC1D5 "Uncharacterized protein... 201 9.9e-16 5
GENEDB_PFALCIPARUM|PF14_0699 - symbol:PF14_0699 "hypothet... 224 3.4e-15 1
UNIPROTKB|Q8IKA7 - symbol:PF14_0699 "GTPase activator, pu... 224 3.4e-15 1
UNIPROTKB|C9J3F6 - symbol:TBC1D5 "TBC1 domain family memb... 202 7.6e-15 3
UNIPROTKB|J9P1H0 - symbol:TBC1D5 "Uncharacterized protein... 203 1.2e-14 3
UNIPROTKB|F1PLA4 - symbol:TBC1D5 "Uncharacterized protein... 203 1.4e-14 3
ZFIN|ZDB-GENE-040426-1197 - symbol:tbc1d5 "TBC1 domain fa... 189 5.6e-14 3
FB|FBgn0038129 - symbol:CG8449 species:7227 "Drosophila m... 157 4.7e-09 3
UNIPROTKB|G4N545 - symbol:MGG_05216 "Uncharacterized prot... 150 1.1e-08 2
WB|WBGene00007167 - symbol:rbg-3 species:6239 "Caenorhabd... 146 1.5e-08 2
UNIPROTKB|Q17491 - symbol:rbg-3 "Protein RBG-3" species:6... 146 1.5e-08 2
ASPGD|ASPL0000071497 - symbol:AN4537 species:162425 "Emer... 145 1.8e-08 4
DICTYBASE|DDB_G0281891 - symbol:DDB_G0281891 "putative GT... 146 3.8e-08 3
UNIPROTKB|F1LXN3 - symbol:Tbc1d5 "Protein Tbc1d5" species... 104 1.5e-06 4
WB|WBGene00009726 - symbol:tbc-13 species:6239 "Caenorhab... 143 1.7e-06 1
DICTYBASE|DDB_G0280253 - symbol:DDB_G0280253 "putative GT... 142 7.8e-06 1
UNIPROTKB|B3KW04 - symbol:TBC1D13 "TBC1 domain family mem... 125 2.6e-05 1
TAIR|locus:2058228 - symbol:AT2G43490 species:3702 "Arabi... 130 8.8e-05 1
UNIPROTKB|E2RQB4 - symbol:TBC1D13 "Uncharacterized protei... 126 9.6e-05 1
UNIPROTKB|J9NWF3 - symbol:TBC1D13 "Uncharacterized protei... 126 9.7e-05 1
UNIPROTKB|E1BXI8 - symbol:TBC1D13 "Uncharacterized protei... 125 0.00012 1
UNIPROTKB|Q9NVG8 - symbol:TBC1D13 "TBC1 domain family mem... 125 0.00012 1
UNIPROTKB|F1RR65 - symbol:TBC1D13 "Uncharacterized protei... 125 0.00012 1
UNIPROTKB|F1MXD4 - symbol:TBC1D13 "Uncharacterized protei... 123 0.00020 1
FB|FBgn0035916 - symbol:GAPsec "GTPase activating protein... 122 0.00027 1
POMBASE|SPAC1952.17c - symbol:SPAC1952.17c "GTPase activa... 119 0.00039 2
RGD|1591937 - symbol:Tbc1d13 "TBC1 domain family, member ... 119 0.00056 1
MGI|MGI:2385326 - symbol:Tbc1d13 "TBC1 domain family, mem... 118 0.00072 1
ZFIN|ZDB-GENE-080204-86 - symbol:tbc1d13 "TBC1 domain fam... 118 0.00077 1
>TAIR|locus:2123859 [details] [associations]
symbol:AT4G29950 species:3702 "Arabidopsis thaliana"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 EMBL:CP002687 GO:GO:0005622 EMBL:AL050352
EMBL:AL161575 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
UniGene:At.31873 HOGENOM:HOG000242002 ProtClustDB:CLSN2683165
EMBL:AY074278 EMBL:AY096528 IPI:IPI00536149 PIR:T08556
RefSeq:NP_567836.2 UniGene:At.20316 ProteinModelPortal:Q9SZR5
STRING:Q9SZR5 PRIDE:Q9SZR5 EnsemblPlants:AT4G29950.1 GeneID:829118
KEGG:ath:AT4G29950 TAIR:At4g29950 InParanoid:Q9SZR5 OMA:FWKFGRN
PhylomeDB:Q9SZR5 Genevestigator:Q9SZR5 Uniprot:Q9SZR5
Length = 828
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 312/651 (47%), Positives = 399/651 (61%)
Query: 1 MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFL-DSMED 59
MHELLAPLLYVLHVDV+RLS+VR +EDHF D+FDGLSF E D+TYNF+FKKFL D +D
Sbjct: 147 MHELLAPLLYVLHVDVDRLSEVRKSYEDHFIDRFDGLSFEERDITYNFEFKKFLEDFTDD 206
Query: 60 EIGS-HGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMV 118
EIG GNS K++S+DELDPEIQ+IV+LSDAYGAEGELGIVLSEKFMEHDAYCMFDALM
Sbjct: 207 EIGGIQGNSKKIKSLDELDPEIQSIVRLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMN 266
Query: 119 GSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFG 178
G G V+MA FFA+S A GS T L PV+EAS+A YHLLS DSSLHSHLVELGVEPQYFG
Sbjct: 267 GVHGCVAMAGFFAYSPASGSHTGLPPVLEASTAFYHLLSFVDSSLHSHLVELGVEPQYFG 326
Query: 179 LRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAV 238
LRWLRVLFGREF L DLLI+WDEIF++D++ D +++ + I SPRGALI+ MAV
Sbjct: 327 LRWLRVLFGREFLLQDLLIVWDEIFSADNT-TRTDADNNTNQSYKIFDSPRGALISGMAV 385
Query: 239 SMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGKTKXXXXXXXXXXXXXXXPPFSG 298
SM+L +RSSLLATENA +CLQRLLNFP I+++KII K K +
Sbjct: 386 SMILCLRSSLLATENAASCLQRLLNFPEKIDVRKIIEKAKSLQTLALDDDVRSSALSIND 445
Query: 299 VYNQN-NPMV-VRGSSLPSESISPRTPLNVVPDSYWEGKWRDLHKA-EEQRHDSSGKQNQ 355
++Q+ +P V R +S PS S SP++PL + P SYWE +WR LHKA EE++ S Q
Sbjct: 446 GFDQSISPAVPARTNSFPSGSTSPKSPLIITPQSYWEDQWRVLHKAAEEEKKSPSPIQ-- 503
Query: 356 TQKKRWLEKVKLRLSRTESDPTPRTVD-NGTKHSR-SSIRRSLLEDLSKELGFEEDSEKD 413
+KK W +VK RL R ES+PT NG + SS+ R+LLED +++L E E +
Sbjct: 504 -KKKPWF-RVK-RLFRAESEPTHSAKSPNGKSEVKISSVARNLLEDFNRQL-VSEPVEAN 559
Query: 414 GILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVSGA 473
I V+ E ++ ++ + +N +F ++E + E SS +FSDP SP+ +
Sbjct: 560 PIDVVNNE------DSSIRETEDINTDFETAAEESIVM----EENSSDLFSDPNSPLRDS 609
Query: 474 NDNEXXXXXXXXXXXXXXXXXXRQSHTMPESPPLPVSQTP--DDIVKDSQSNNDSLEKSQ 531
N E + ++ +SP L +S P + IV S+ S+ S
Sbjct: 610 NYIENDSDSSNESNLFPDETVKDRETSVVDSP-LSISSQPSMEFIVSLSKDQETSVVDSP 668
Query: 532 T-VRKVLSGKFQWFWKFGRNSAGEET----SEKGGV----------------ATETKISA 570
V S +F ++A +++ E+ V A ET+ +
Sbjct: 669 LPVSSQPSIEFPVTQSNDEDNAADKSVANIKERSKVLPGKFQWFWKFGRNVTAEETRCNG 728
Query: 571 NNESNQSNSKGAXXXXXXXXXXXXXKGETVDQNVMGTLKNLGQSMLEHIQV 621
S + KG+T DQNVM TLKNLG SMLEHIQV
Sbjct: 729 VESSKSDLVCSSESHSLPQASSSGSKGDT-DQNVMNTLKNLGNSMLEHIQV 778
>TAIR|locus:2047600 [details] [associations]
symbol:AT2G19240 species:3702 "Arabidopsis thaliana"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0032313 "regulation of Rab GTPase
activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 EMBL:AC003058
IPI:IPI00516454 PIR:T01272 RefSeq:NP_179514.1 UniGene:At.52828
ProteinModelPortal:O64557 EnsemblPlants:AT2G19240.1 GeneID:816441
KEGG:ath:AT2G19240 TAIR:At2g19240 HOGENOM:HOG000242002
InParanoid:O64557 PhylomeDB:O64557 ProtClustDB:CLSN2683165
Genevestigator:O64557 Uniprot:O64557
Length = 840
Score = 1168 (416.2 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 255/474 (53%), Positives = 317/474 (66%)
Query: 1 MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDE 60
MHELLAPLLYVLHVD+ RLS+VR +ED+FTD+FD LSF E D+TY FDF KF+DS+++
Sbjct: 151 MHELLAPLLYVLHVDIMRLSEVRKSYEDYFTDRFDSLSFMERDITYTFDFNKFMDSVDNG 210
Query: 61 IGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGS 120
IGS G+S S+DELDPE+Q++V L+D+YG E ELGIVLSEKFMEHDAYCMFDALM G
Sbjct: 211 IGSQGHSKNFNSLDELDPEVQSLVMLTDSYGTESELGIVLSEKFMEHDAYCMFDALMSGI 270
Query: 121 QGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLR 180
G +MA FF++S A GS T L PV+EA SA Y +L+V DSSLHSHLVELGVEPQYFGLR
Sbjct: 271 HGCFAMASFFSYSPASGSHTGLTPVLEACSAFYRILAVVDSSLHSHLVELGVEPQYFGLR 330
Query: 181 WLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGALIAAMAVSM 240
WLRVLFGREF L DLL++WDEI +D+S + ED F I PRG L+ M VSM
Sbjct: 331 WLRVLFGREFLLQDLLLVWDEIILADNSA--RTDEDSRNQNFRIFDCPRGTLVLGMTVSM 388
Query: 241 MLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGKTKXXXXXXXXXXXXXXXPPFSGVY 300
+LY+RSSLL+TENAT CLQRLLNFP NI+L KII K K +GV+
Sbjct: 389 ILYLRSSLLSTENATCCLQRLLNFPENIDLNKIIQKAKLLQALVLDTDMLSALS-INGVF 447
Query: 301 NQNNPMVVRGSSLPSESISPRTPLNVVPDSYWEGKWRDLHKAEEQRHDSS-GKQNQ-TQK 358
+Q+N + R S S SPR+PL + P+SYWE KWR LHKAEE+ + KQ TQK
Sbjct: 448 DQSNFVPARTKSC---STSPRSPLIIAPESYWEKKWRVLHKAEEEENKICLEKQTPPTQK 504
Query: 359 K-RWLEKVKLRLSRTESDPTPRTVDNGTKHSRSS-IRRSLLEDLSKELGFEEDSEKDGIL 416
K RWL KL R D + + G + + SS + +SLLED S++L D +
Sbjct: 505 KKRWLNVTKL--FRAVIDLSHHKLGIGERKANSSPVTQSLLEDSSEQLNV------DCHV 556
Query: 417 EVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPV 470
V+ E P E E +++ EF +E ++G++ SEESS + DP SPV
Sbjct: 557 TVNKENIHPQ-ETE----ENI-MEFHSADEESIVSGSSPSEESSFVSLDPTSPV 604
Score = 145 (56.1 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 57/170 (33%), Positives = 76/170 (44%)
Query: 456 SEESSSIFSDPASPVSGANDNEXXXXXXXXXXXXXXXXXXRQSHTMPESPPLPVSQTPDD 515
SEE+SS+ SDP SP +N + T SP L VS +
Sbjct: 635 SEENSSVSSDPISPAIDSN------YSGKYLDCCTGSENDKDQQTSVNSP-LSVSPHRRN 687
Query: 516 IVKDSQSNND-SLEKSQTVRK---VLSGKFQWFWKFGRNSAGEETSE-KGGVATETKISA 570
+QS+ D S +KS + K +L G QWF K R + EETS K AT+T
Sbjct: 688 EYPVTQSDEDVSTDKSVGITKEYKLLHGIVQWFRKLKRTLSSEETSHRKASDATKT---- 743
Query: 571 NNESNQSNSKGAXXXXXXXXXXXXXKGETVDQNVMGTLKNLGQSMLEHIQ 620
N+ + N G G++ QN+ TLKNLGQSML+HI+
Sbjct: 744 NDVKIKKNQIGCYSESHPQALSS---GDS-SQNLRKTLKNLGQSMLKHIE 789
>TAIR|locus:2165625 [details] [associations]
symbol:AT5G57210 species:3702 "Arabidopsis thaliana"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 EMBL:AB019233
eggNOG:NOG302382 HOGENOM:HOG000242002 ProtClustDB:CLSN2683165
EMBL:AY128297 EMBL:BT000636 IPI:IPI00537797 RefSeq:NP_200531.1
UniGene:At.29344 ProteinModelPortal:Q9LVD7 IntAct:Q9LVD7
PaxDb:Q9LVD7 PRIDE:Q9LVD7 EnsemblPlants:AT5G57210.1 GeneID:835827
KEGG:ath:AT5G57210 TAIR:At5g57210 InParanoid:Q9LVD7 OMA:YSAPNDS
PhylomeDB:Q9LVD7 Genevestigator:Q9LVD7 Uniprot:Q9LVD7
Length = 737
Score = 1120 (399.3 bits), Expect = 5.8e-122, Sum P(2) = 5.8e-122
Identities = 255/457 (55%), Positives = 305/457 (66%)
Query: 1 MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDL-TYNFDFKKFLD-SME 58
MHELLAPLLYVL VDV+ L++VR+ +ED F D FD L+F E D Y+FD KK LD SME
Sbjct: 161 MHELLAPLLYVLQVDVQYLTEVRSNYEDQFVDLFDELAFQERDSGAYDFDIKKVLDDSME 220
Query: 59 DEI--GSHGNSVKVR---SVDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMF 113
DE G S K + S DELD E QT V LSDAYG EGELGIVLS+KFMEHDAY MF
Sbjct: 221 DEEEDGPPSGSTKKKKPKSFDELDTETQTAVLLSDAYGGEGELGIVLSDKFMEHDAYTMF 280
Query: 114 DALMVG--SQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELG 171
DALM G S GSVS+A+FF +S + S+T L PVIEAS A+YHLLS+ D+SLHSHLVELG
Sbjct: 281 DALMYGGSSLGSVSVANFFIYSAPNDSITGLPPVIEASGALYHLLSLVDASLHSHLVELG 340
Query: 172 VEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDTEDDAGSGFGILSSPRGA 231
VEPQYF LRWLRVLFGREF L +LLI+WDEIF++D+S+V + E D G F ILSSPRGA
Sbjct: 341 VEPQYFALRWLRVLFGREFPLSNLLIVWDEIFSADNSEVERGVEADLGCEFRILSSPRGA 400
Query: 232 LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGKTKXXXXXXXXXXXXX 291
L+A MAVSM+LY+RSSLLATENAT+ L++LLNFP +I+L K+I K K
Sbjct: 401 LVAGMAVSMILYLRSSLLATENATSSLKKLLNFPEDIDLSKVIEKAKTLQSLALEINARR 460
Query: 292 XXPPFSGVYNQNNPMVVRGSSLPSESIS-PRTPLNVVPDSYWEGKWRDLHKAEEQRHDSS 350
P G PM RG SL +SIS +P+ + P+SYWE KWR L+ AEE+
Sbjct: 461 DLIP-KG---PRKPM--RGHSLSVDSISLGSSPVGIEPESYWEEKWRVLNSAEEEERRKK 514
Query: 351 GKQN-QTQKKRWLEKVKLRLSRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEED 409
Q + KK W E+VKLRLSRTESDP+P ++ IRRSLL+DLS++LG +E
Sbjct: 515 ALQRPKAGKKSWSERVKLRLSRTESDPSPAEAKRSG--NKPHIRRSLLDDLSRQLGEKEI 572
Query: 410 SEKD------GILEVSTEKDQPSVEAEVQRQDSVNRE 440
+ I ST D PS E E D E
Sbjct: 573 EPPEFPNPDTDIERSSTVSDTPSAEYEDNSSDKGKSE 609
Score = 100 (40.3 bits), Expect = 5.8e-122, Sum P(2) = 5.8e-122
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 534 RKVLSGKFQWFWKFGRNSAGEETSEKGGVATETKISANNESNQSNSKG 581
RK+LSGKFQ W+ GRN +GEETSE +S+ ++ G
Sbjct: 635 RKILSGKFQRLWRLGRNLSGEETSETKEAKQVDSEDGKTDSDSTSGPG 682
Score = 60 (26.2 bits), Expect = 9.7e-118, Sum P(2) = 9.7e-118
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 597 GETVDQNVMG---TLKNLGQSMLEHIQVTFSFCTL 628
G+T + G +LKN G+SMLEHI+V S L
Sbjct: 671 GKTDSDSTSGPGDSLKNTGRSMLEHIKVIESVLEL 705
>UNIPROTKB|F1LXN2 [details] [associations]
symbol:Tbc1d5 "Protein Tbc1d5" species:10116 "Rattus
norvegicus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
RGD:1561626 GO:GO:0005622 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 IPI:IPI00778041 Ensembl:ENSRNOT00000061800
ArrayExpress:F1LXN2 Uniprot:F1LXN2
Length = 771
Score = 203 (76.5 bits), Expect = 3.4e-19, Sum P(5) = 3.4e-19
Identities = 49/139 (35%), Positives = 72/139 (51%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 166 QAFLHASESAQPRQEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 222
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D+ L+ HL L + PQ +GLRW+R+L
Sbjct: 223 LMPPIPFARPQDLGPTVAIVTKVNQIQDHLLKKHDTELYMHLNRLEIPPQIYGLRWVRLL 282
Query: 186 FGREFSLGDLLIIWDEIFA 204
FGREF L DLL++WD +FA
Sbjct: 283 FGREFPLQDLLVVWDALFA 301
Score = 68 (29.0 bits), Expect = 3.4e-19, Sum P(5) = 3.4e-19
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 231 ALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGK 276
+L+ + +M+LYIR +L+++ N TCL L+++P+ ++ +I K
Sbjct: 307 SLVDYVFTAMLLYIRDALISS-NYQTCLGLLMHYPLIGDIHSLILK 351
Score = 61 (26.5 bits), Expect = 3.4e-19, Sum P(5) = 3.4e-19
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++ LH D
Sbjct: 150 MHELLAPIIFTLHCD 164
Score = 51 (23.0 bits), Expect = 3.4e-19, Sum P(5) = 3.4e-19
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 340 HKAEEQRHDSSGKQNQTQKKRWLEKVKLRLSRTESDP 376
H +++QR +Q Q Q+++ ++ + RL ++ES P
Sbjct: 450 HHSQQQRQQQQQQQQQQQQQQ--QQQQQRLMKSESMP 484
Score = 48 (22.0 bits), Expect = 3.4e-19, Sum P(5) = 3.4e-19
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVS 471
KD IL+ S +Q +EAE Q ++ + C+S + G G + S+
Sbjct: 628 KD-ILKGSLRFNQSQLEAEENEQITIADDHYCSSGQDQ--GTQGPRAAKQASSEMPGCTG 684
Query: 472 GANDNE 477
GA ++
Sbjct: 685 GATSDD 690
Score = 37 (18.1 bits), Expect = 8.5e-18, Sum P(5) = 8.5e-18
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S T+ D + HS++ R+ E+L ++ F + D
Sbjct: 540 SATKRDSFFSHIARSRSHSKAMGRKESEEELEAQISFLQGQLND 583
>RGD|1561626 [details] [associations]
symbol:Tbc1d5 "TBC1 domain family, member 5" species:10116
"Rattus norvegicus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030904
"retromer complex" evidence=ISO] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 RGD:1561626 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:9779 IPI:IPI00371548
RefSeq:NP_001128234.1 UniGene:Rn.203950 Ensembl:ENSRNOT00000014171
GeneID:501088 KEGG:rno:501088 UCSC:RGD:1561626 NextBio:708235
ArrayExpress:F1M9Q1 Uniprot:F1M9Q1
Length = 805
Score = 203 (76.5 bits), Expect = 3.7e-19, Sum P(5) = 3.7e-19
Identities = 49/139 (35%), Positives = 72/139 (51%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 222 QAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 278
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D+ L+ HL L + PQ +GLRW+R+L
Sbjct: 279 LMPPIPFARPQDLGPTVAIVTKVNQIQDHLLKKHDTELYMHLNRLEIPPQIYGLRWVRLL 338
Query: 186 FGREFSLGDLLIIWDEIFA 204
FGREF L DLL++WD +FA
Sbjct: 339 FGREFPLQDLLVVWDALFA 357
Score = 68 (29.0 bits), Expect = 3.7e-19, Sum P(5) = 3.7e-19
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 231 ALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGK 276
+L+ + +M+LYIR +L+++ N TCL L+++P+ ++ +I K
Sbjct: 363 SLVDYVFTAMLLYIRDALISS-NYQTCLGLLMHYPLIGDIHSLILK 407
Score = 61 (26.5 bits), Expect = 3.7e-19, Sum P(5) = 3.7e-19
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++ LH D
Sbjct: 206 MHELLAPIIFTLHCD 220
Score = 52 (23.4 bits), Expect = 3.7e-19, Sum P(5) = 3.7e-19
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 340 HKAEEQRHDSSGKQNQTQKKRWLEKVKLRLSRTESDPTPRTVDNGTKHSRSS 391
H +++QR +Q Q Q+++ ++ + RL ++ES P K SS
Sbjct: 506 HHSQQQRQQQQQQQQQQQQQQ--QQQQQRLMKSESMPVQLNKGQSPKTISSS 555
Score = 48 (22.0 bits), Expect = 3.7e-19, Sum P(5) = 3.7e-19
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVS 471
KD IL+ S +Q +EAE Q ++ + C+S + G G + S+
Sbjct: 662 KD-ILKGSLRFNQSQLEAEENEQITIADDHYCSSGQDQ--GTQGPRAAKQASSEMPGCTG 718
Query: 472 GANDNE 477
GA ++
Sbjct: 719 GATSDD 724
Score = 37 (18.1 bits), Expect = 1.2e-17, Sum P(5) = 1.2e-17
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S T+ D + HS++ R+ E+L ++ F + D
Sbjct: 574 SATKRDSFFSHIARSRSHSKAMGRKESEEELEAQISFLQGQLND 617
>UNIPROTKB|E1BRI4 [details] [associations]
symbol:TBC1D5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 OMA:IADDHYC EMBL:AADN02001037
EMBL:AADN02001038 EMBL:AADN02001039 EMBL:AADN02001040
IPI:IPI00571375 Ensembl:ENSGALT00000018357 Uniprot:E1BRI4
Length = 788
Score = 199 (75.1 bits), Expect = 2.9e-18, Sum P(5) = 2.9e-18
Identities = 50/143 (34%), Positives = 75/143 (52%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q S+A E+ ++L+ +++EHDAY MF LM ++ S + + D +T
Sbjct: 221 QAFSHASEAAQPSEEMKVLLNPEYLEHDAYAMFTRLMKTAEHWFSTFEHDSQKEKDVMIT 280
Query: 141 CL---LP---------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGR 188
+ P V + + LL D L+ HL L + PQ +GLRW+R+LFGR
Sbjct: 281 PMPFARPQDLGPSIAIVTKVNQIQDQLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGR 340
Query: 189 EFSLGDLLIIWDEIFASDSSKVN 211
EF L DLL++WD +FA DS +N
Sbjct: 341 EFPLQDLLVVWDALFA-DSITLN 362
Score = 68 (29.0 bits), Expect = 2.9e-18, Sum P(5) = 2.9e-18
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 232 LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 265
L+ + V+M+LYIR +L+++ N TCL L+++P
Sbjct: 363 LVDYIFVAMLLYIRDALISS-NYQTCLGLLMHYP 395
Score = 65 (27.9 bits), Expect = 2.9e-18, Sum P(5) = 2.9e-18
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 1 MHELLAPLLYVLHVDVERLS 20
MHELLAP++++LH D + S
Sbjct: 205 MHELLAPIVFILHCDHQAFS 224
Score = 50 (22.7 bits), Expect = 2.9e-18, Sum P(5) = 2.9e-18
Identities = 27/128 (21%), Positives = 56/128 (43%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVS 471
KD IL+ S +Q +EAE Q ++ + C++++ TG+ + +S + A+ S
Sbjct: 641 KD-ILKGSLRFNQSQLEAEENEQITIADDHYCSNNQNKGTGDILNVSLTSAKKETATHSS 699
Query: 472 -----GAND----NEXXXXXXXXXXXXXXXXXXRQSHTMPESPPLPVSQTPDDIVKDSQS 522
GA+D ++ ++S PE+P P+ + D ++ +
Sbjct: 700 TSESKGADDCILVSKEEGSRNAVPEPAQLLQTFKESAVKPEAPSRPLVFS-DPLMGSISA 758
Query: 523 NNDSLEKS 530
++ +L S
Sbjct: 759 SSSNLSSS 766
Score = 41 (19.5 bits), Expect = 2.9e-18, Sum P(5) = 2.9e-18
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 369 LSRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
LS ++ D T+ S++ R+ E+L ++ F + D
Sbjct: 552 LSASKKDSFFSTISRSRSQSKTMSRKESEEELEAQISFLQGQLND 596
>MGI|MGI:1919488 [details] [associations]
symbol:Tbc1d5 "TBC1 domain family, member 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005097
"Rab GTPase activator activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030904 "retromer complex" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
MGI:MGI:1919488 GO:GO:0005622 eggNOG:COG5210 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 GeneTree:ENSGT00510000046400 CTD:9779
HOVERGEN:HBG062913 OMA:IADDHYC ChiTaRS:TBC1D5 EMBL:AC099694
EMBL:AC110168 EMBL:AC125140 EMBL:AC154214 EMBL:CT025541
EMBL:BC043113 IPI:IPI00119109 RefSeq:NP_082438.3 UniGene:Mm.120650
ProteinModelPortal:Q80XQ2 PhosphoSite:Q80XQ2 PaxDb:Q80XQ2
PRIDE:Q80XQ2 Ensembl:ENSMUST00000024717 GeneID:72238 KEGG:mmu:72238
NextBio:335783 Bgee:Q80XQ2 CleanEx:MM_TBC1D5 Genevestigator:Q80XQ2
GermOnline:ENSMUSG00000023923 Uniprot:Q80XQ2
Length = 815
Score = 203 (76.5 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 51/142 (35%), Positives = 73/142 (51%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 222 QAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 278
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D L+ HL L + PQ +GLRW+R+L
Sbjct: 279 LMAPIPFARPQDLGPTVAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 338
Query: 186 FGREFSLGDLLIIWDEIFASDS 207
FGREF L DLL++WD +FA DS
Sbjct: 339 FGREFPLQDLLVVWDALFA-DS 359
Score = 70 (29.7 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 231 ALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGK 276
+L+ + +M+LYIR +L+++ N TCL L+++P+ ++ +I K
Sbjct: 363 SLVDYVFTAMLLYIRDALISS-NYQTCLGLLMHYPIIGDIHSLILK 407
Score = 61 (26.5 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++ LH D
Sbjct: 206 MHELLAPIIFTLHCD 220
Score = 49 (22.3 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 339 LHKAEEQRHDSSGKQN--QTQKKRWLEKVKLRLSRTESDPTPRTVDNGTKHSRSS 391
L + ++Q+H +Q Q Q++ ++ + RL ++ES P +K SS
Sbjct: 509 LQQQQQQQHQQQQQQQPQQQQQQHQQQQQQQRLMKSESMPVQLNKGQSSKTISSS 563
Score = 42 (19.8 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 295 PFSGVYNQNNPMVVRGSSLP-SESISPRTPLNVVPDSYWEGKWRDLHKAEEQRHDSSGKQ 353
P S + P+ SS S +I RT + + + H+ ++Q+ +Q
Sbjct: 471 PASAPGSMGGPVPGNNSSSSFSAAIPTRTSTEAPRHHLLQQQQQQQHQQQQQQQPQQQQQ 530
Query: 354 N---QTQKKRWL--EKVKLRLSRTESDPT 377
Q Q++R + E + ++L++ +S T
Sbjct: 531 QHQQQQQQQRLMKSESMPVQLNKGQSSKT 559
Score = 40 (19.1 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S T+ D + HS++ R+ E+L ++ F + D
Sbjct: 582 SATKKDSFFSNIARSRSHSKTMGRKESEEELEAQISFLQGQLND 625
>UNIPROTKB|F1N3C5 [details] [associations]
symbol:TBC1D5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 EMBL:DAAA02003742 EMBL:DAAA02003743
EMBL:DAAA02003744 EMBL:DAAA02003745 IPI:IPI00968648
Ensembl:ENSBTAT00000043194 Uniprot:F1N3C5
Length = 804
Score = 192 (72.6 bits), Expect = 4.3e-17, Sum P(6) = 4.3e-17
Identities = 48/139 (34%), Positives = 70/139 (50%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 220 QAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 276
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + LL D L+ HL L + PQ +GLRW+R+L
Sbjct: 277 LMPPIPFARPQDLGPTIAIVTKVNQIQDQLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 336
Query: 186 FGREFSLGDLLIIWDEIFA 204
FGREF L DLL++WD +FA
Sbjct: 337 FGREFPLQDLLVVWDALFA 355
Score = 70 (29.7 bits), Expect = 4.3e-17, Sum P(6) = 4.3e-17
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 232 LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGK 276
L+ + V+M+LYIR +L+++ N TCL L+++P+ ++ +I K
Sbjct: 362 LVDYVFVAMLLYIRDALISS-NYQTCLGLLMHYPLIGDVHSLILK 405
Score = 60 (26.2 bits), Expect = 4.3e-17, Sum P(6) = 4.3e-17
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++ LH D
Sbjct: 204 MHELLAPIVFTLHCD 218
Score = 47 (21.6 bits), Expect = 4.3e-17, Sum P(6) = 4.3e-17
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDE-RYLTGNAG 455
KD IL+ S +Q +EAE Q S++ + C+S + + G+ G
Sbjct: 667 KD-ILKGSLRFNQSQLEAEDNEQISISDDHYCSSGAAQQVPGSQG 710
Score = 40 (19.1 bits), Expect = 4.3e-17, Sum P(6) = 4.3e-17
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S + D + HS++ RR E+L ++ F + D
Sbjct: 579 SAAKKDSFFSNISRSRSHSKTMGRRESEEELEAQISFLQGQLND 622
Score = 38 (18.4 bits), Expect = 4.3e-17, Sum P(6) = 4.3e-17
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 305 PMVVRGSSLPSESISPRTPLNVVPDSYWEGKWRDLHKAE 343
P+ G+ PS + +P L P + + + L K+E
Sbjct: 479 PVAAGGAGAPSPAAAPTRTLAEAPRHALQQQQQRLMKSE 517
>UNIPROTKB|Q92609 [details] [associations]
symbol:TBC1D5 "TBC1 domain family member 5" species:9606
"Homo sapiens" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030904
"retromer complex" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 GO:GO:0005622 eggNOG:COG5210 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 GO:GO:0030904 EMBL:AC139618
EMBL:AC144521 EMBL:D86965 EMBL:AK310539 EMBL:AC090644 EMBL:AC090960
EMBL:AC099543 EMBL:AC104297 EMBL:AC104451 EMBL:AC132807
EMBL:AC137672 EMBL:AC140076 EMBL:AC144531 EMBL:BC013145
IPI:IPI00022450 IPI:IPI00910882 RefSeq:NP_001127852.1
RefSeq:NP_001127853.1 RefSeq:NP_055559.1 UniGene:Hs.475629
ProteinModelPortal:Q92609 IntAct:Q92609 MINT:MINT-1457212
STRING:Q92609 PhosphoSite:Q92609 DMDM:2495720 PaxDb:Q92609
PRIDE:Q92609 Ensembl:ENST00000253692 Ensembl:ENST00000429383
Ensembl:ENST00000446818 GeneID:9779 KEGG:hsa:9779 UCSC:uc003cbe.3
CTD:9779 GeneCards:GC03M017198 HGNC:HGNC:19166 HPA:HPA035126
neXtProt:NX_Q92609 PharmGKB:PA38808 HOGENOM:HOG000067839
HOVERGEN:HBG062913 InParanoid:Q92609 OMA:IADDHYC OrthoDB:EOG4GF3DP
ChiTaRS:TBC1D5 GenomeRNAi:9779 NextBio:36820 ArrayExpress:Q92609
Bgee:Q92609 CleanEx:HS_TBC1D5 Genevestigator:Q92609
GermOnline:ENSG00000131374 Uniprot:Q92609
Length = 795
Score = 202 (76.2 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
Identities = 50/143 (34%), Positives = 72/143 (50%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ VL+ +++EHDAY +F LM ++ S F H G T
Sbjct: 222 QAFLHASESAQPSEEMKTVLNPEYLEHDAYAVFSQLMETAEPWFST---FEHDGQKGKET 278
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D L+ HL L + PQ +GLRW+R+L
Sbjct: 279 LMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 338
Query: 186 FGREFSLGDLLIIWDEIFASDSS 208
FGREF L DLL++WD +FA S
Sbjct: 339 FGREFPLQDLLVVWDALFADGLS 361
Score = 64 (27.6 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++VLH D
Sbjct: 206 MHELLAPIVFVLHCD 220
Score = 56 (24.8 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVS 471
KD IL+ S +Q +EAE Q ++ C+S + G S + S +S
Sbjct: 646 KD-ILKGSLRFNQSQLEAEENEQITIADNHYCSSGQGQGRGQGQSVQMSGAIKQASSETP 704
Query: 472 GAND 475
G D
Sbjct: 705 GCTD 708
Score = 42 (19.8 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S T+ D + HS++ R+ E+L ++ F + D
Sbjct: 558 SATKKDSFFSNISRSRSHSKTMGRKESEEELEAQISFLQGQLND 601
>UNIPROTKB|F1RS74 [details] [associations]
symbol:TBC1D5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 OMA:IADDHYC EMBL:AEMK01179021
EMBL:CU633663 EMBL:CU928913 EMBL:FP085376 EMBL:FP312726
Ensembl:ENSSSCT00000012264 Uniprot:F1RS74
Length = 807
Score = 201 (75.8 bits), Expect = 7.9e-16, Sum P(4) = 7.9e-16
Identities = 50/143 (34%), Positives = 72/143 (50%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 222 QAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 278
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D L+ HL L + PQ +GLRW+R+L
Sbjct: 279 LMPPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 338
Query: 186 FGREFSLGDLLIIWDEIFASDSS 208
FGREF L DLL++WD +FA S
Sbjct: 339 FGREFPLQDLLVVWDALFADGLS 361
Score = 60 (26.2 bits), Expect = 7.9e-16, Sum P(4) = 7.9e-16
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++ LH D
Sbjct: 206 MHELLAPIVFTLHCD 220
Score = 58 (25.5 bits), Expect = 7.9e-16, Sum P(4) = 7.9e-16
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 407 EEDSEK-DGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESS---SI 462
+E+ EK D IL +Q +EAE Q +++ + C+S + ++ G S + S ++
Sbjct: 655 QENLEKEDQILVSLAGLNQSQLEAEENEQITISDDHYCSSGQGHVPGATKSSQVSVLCNL 714
Query: 463 FSDPA 467
FS A
Sbjct: 715 FSKTA 719
Score = 44 (20.5 bits), Expect = 7.9e-16, Sum P(4) = 7.9e-16
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 342 AEEQRHDSSGKQNQTQKKRWLEKVKLRLSRTESDP 376
AE RH +Q Q Q++R ++ + + + +P
Sbjct: 502 AEAPRHPLQQQQQQQQQQRLMKSESMPVQLNKGNP 536
Score = 44 (20.5 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKDGILEVSTEKDQPSVEA 429
S T+ D ++ HS++ R+ E+L ++ F + D L+ + ++
Sbjct: 587 SATKKDSFFSSISRSRSHSKTMGRKESEEELEAQISFLQGQLND--LDAMCKYCAKVMDT 644
Query: 430 E-VQRQDSVNREFACTSDERYLTGNAGSEES 459
V QD + +E +++ L AG +S
Sbjct: 645 HLVNIQDVILQE-NLEKEDQILVSLAGLNQS 674
>UNIPROTKB|F1RS65 [details] [associations]
symbol:TBC1D5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 EMBL:AEMK01179021 EMBL:CU633663
EMBL:CU928913 EMBL:FP085376 EMBL:FP312726
Ensembl:ENSSSCT00000012265 Uniprot:F1RS65
Length = 784
Score = 201 (75.8 bits), Expect = 9.9e-16, Sum P(5) = 9.9e-16
Identities = 50/143 (34%), Positives = 72/143 (50%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 222 QAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 278
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D L+ HL L + PQ +GLRW+R+L
Sbjct: 279 LMPPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 338
Query: 186 FGREFSLGDLLIIWDEIFASDSS 208
FGREF L DLL++WD +FA S
Sbjct: 339 FGREFPLQDLLVVWDALFADGLS 361
Score = 60 (26.2 bits), Expect = 9.9e-16, Sum P(5) = 9.9e-16
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++ LH D
Sbjct: 206 MHELLAPIVFTLHCD 220
Score = 51 (23.0 bits), Expect = 9.9e-16, Sum P(5) = 9.9e-16
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTG 452
KD IL+ S +Q +EAE Q +++ + C+S + ++ G
Sbjct: 648 KD-ILKGSLRFNQSQLEAEENEQITISDDHYCSSGQGHVPG 687
Score = 43 (20.2 bits), Expect = 9.9e-16, Sum P(5) = 9.9e-16
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S T+ D ++ HS++ R+ E+L ++ F + D
Sbjct: 560 SATKKDSFFSSISRSRSHSKTMGRKESEEELEAQISFLQGQLND 603
Score = 42 (19.8 bits), Expect = 9.9e-16, Sum P(5) = 9.9e-16
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 342 AEEQRHDSSGKQNQTQKKRWLEKVKLRLSRTES 374
AE RH +Q Q Q+ E + ++L++ +S
Sbjct: 502 AEAPRHPLQQQQQQQQRLMKSESMPVQLNKGQS 534
>GENEDB_PFALCIPARUM|PF14_0699 [details] [associations]
symbol:PF14_0699 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 EMBL:AE014187 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 RefSeq:XP_001348873.1 ProteinModelPortal:Q8IKA7
EnsemblProtists:PF14_0699:mRNA GeneID:812281 KEGG:pfa:PF14_0699
EuPathDB:PlasmoDB:PF3D7_1473100 HOGENOM:HOG000281857
ProtClustDB:CLSZ2431763 Uniprot:Q8IKA7
Length = 592
Score = 224 (83.9 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 58/186 (31%), Positives = 95/186 (51%)
Query: 95 ELGIVLSEKFMEHDAYCMFDALMVGSQG-SVSMADFFAHSHADGSLTCLLPVIEASSAMY 153
E + ++F+E D Y +FD M + G ++ TC ++ + ++
Sbjct: 235 EFSNLFDKEFIEADTYIIFDHFM--NMGLKYLFTSMEEKKNSTNKNTCKTVLLHKCTYIF 292
Query: 154 H-LLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSK-VN 211
H LL +D L++HL+ L +EPQ F LRW+R+ + REF + D +I+WD FA K N
Sbjct: 293 HKLLKNSDKLLYNHLISLSIEPQIFLLRWIRLFYCREFPIDDTVILWDNFFADSYLKNCN 352
Query: 212 KDTEDD-AGSGFGI--LSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNI 268
+ D G I + ++ A+SM+L+IRS LL ++ CL+RL +P
Sbjct: 353 EQFNVDFKGDNIEIAHMICRIFPMVDYFAISMILFIRSFLLESDE-NHCLKRLFKYPPVE 411
Query: 269 NLKKII 274
N+K +I
Sbjct: 412 NIKILI 417
>UNIPROTKB|Q8IKA7 [details] [associations]
symbol:PF14_0699 "GTPase activator, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
EMBL:AE014187 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
RefSeq:XP_001348873.1 ProteinModelPortal:Q8IKA7
EnsemblProtists:PF14_0699:mRNA GeneID:812281 KEGG:pfa:PF14_0699
EuPathDB:PlasmoDB:PF3D7_1473100 HOGENOM:HOG000281857
ProtClustDB:CLSZ2431763 Uniprot:Q8IKA7
Length = 592
Score = 224 (83.9 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 58/186 (31%), Positives = 95/186 (51%)
Query: 95 ELGIVLSEKFMEHDAYCMFDALMVGSQG-SVSMADFFAHSHADGSLTCLLPVIEASSAMY 153
E + ++F+E D Y +FD M + G ++ TC ++ + ++
Sbjct: 235 EFSNLFDKEFIEADTYIIFDHFM--NMGLKYLFTSMEEKKNSTNKNTCKTVLLHKCTYIF 292
Query: 154 H-LLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSK-VN 211
H LL +D L++HL+ L +EPQ F LRW+R+ + REF + D +I+WD FA K N
Sbjct: 293 HKLLKNSDKLLYNHLISLSIEPQIFLLRWIRLFYCREFPIDDTVILWDNFFADSYLKNCN 352
Query: 212 KDTEDD-AGSGFGI--LSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNI 268
+ D G I + ++ A+SM+L+IRS LL ++ CL+RL +P
Sbjct: 353 EQFNVDFKGDNIEIAHMICRIFPMVDYFAISMILFIRSFLLESDE-NHCLKRLFKYPPVE 411
Query: 269 NLKKII 274
N+K +I
Sbjct: 412 NIKILI 417
>UNIPROTKB|C9J3F6 [details] [associations]
symbol:TBC1D5 "TBC1 domain family member 5" species:9606
"Homo sapiens" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
EMBL:AC139618 EMBL:AC144521 EMBL:AC090644 EMBL:AC090960
EMBL:AC099543 EMBL:AC104297 EMBL:AC104451 EMBL:AC132807
EMBL:AC137672 EMBL:AC140076 EMBL:AC144531 HGNC:HGNC:19166
HOGENOM:HOG000067839 ChiTaRS:TBC1D5 IPI:IPI00924677
ProteinModelPortal:C9J3F6 STRING:C9J3F6 PRIDE:C9J3F6
Ensembl:ENST00000429924 UCSC:uc010hew.1 ArrayExpress:C9J3F6
Bgee:C9J3F6 Uniprot:C9J3F6
Length = 593
Score = 202 (76.2 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 50/143 (34%), Positives = 72/143 (50%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ VL+ +++EHDAY +F LM ++ S F H G T
Sbjct: 174 QAFLHASESAQPSEEMKTVLNPEYLEHDAYAVFSQLMETAEPWFST---FEHDGQKGKET 230
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D L+ HL L + PQ +GLRW+R+L
Sbjct: 231 LMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 290
Query: 186 FGREFSLGDLLIIWDEIFASDSS 208
FGREF L DLL++WD +FA S
Sbjct: 291 FGREFPLQDLLVVWDALFADGLS 313
Score = 64 (27.6 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+++VLH D
Sbjct: 158 MHELLAPIVFVLHCD 172
Score = 42 (19.8 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S T+ D + HS++ R+ E+L ++ F + D
Sbjct: 532 SATKKDSFFSNISRSRSHSKTMGRKESEEELEAQISFLQGQLND 575
>UNIPROTKB|J9P1H0 [details] [associations]
symbol:TBC1D5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:9779 EMBL:AAEX03013582
EMBL:AAEX03013581 GeneID:485651 KEGG:cfa:485651
RefSeq:XP_003639868.1 Ensembl:ENSCAFT00000047780 Uniprot:J9P1H0
Length = 796
Score = 203 (76.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 50/143 (34%), Positives = 72/143 (50%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 221 QAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 277
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D L+ HL L + PQ +GLRW+R+L
Sbjct: 278 LMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 337
Query: 186 FGREFSLGDLLIIWDEIFASDSS 208
FGREF L DLL++WD +FA S
Sbjct: 338 FGREFPLQDLLVVWDALFADGLS 360
Score = 63 (27.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP++++LH D
Sbjct: 205 MHELLAPIVFILHCD 219
Score = 46 (21.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVS 471
KD IL+ S +Q +EAE Q +++ + C+S + G S++ +S
Sbjct: 648 KD-ILKGSLRFNQSQLEAEENEQITISDDHYCSSGQ----GQGQSDQMPRTTKQASSETP 702
Query: 472 GAND 475
G D
Sbjct: 703 GHMD 706
Score = 38 (18.4 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 23/107 (21%), Positives = 41/107 (38%)
Query: 373 ESDPTPRTVDNGTKHSRSSIRRSLLED---LSKELGFEEDSEKDGILEVSTEKDQPSVEA 429
+SD PRT + + + R +D +SKE +E G + + ++ +
Sbjct: 686 QSDQMPRTTKQASSETPGHMDRGSADDFILVSKE---DEGGSAKGSFSGQAQPLR-TLRS 741
Query: 430 EVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVSGANDN 476
R + + R SD L G A + S+ S S + D+
Sbjct: 742 TCGRSEPLARSPLVFSDP--LMGPASASSSNPSSSPDEDSSSNSKDS 786
>UNIPROTKB|F1PLA4 [details] [associations]
symbol:TBC1D5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:9779 OMA:IADDHYC EMBL:AAEX03013582
EMBL:AAEX03013581 RefSeq:XP_542771.4 Ensembl:ENSCAFT00000009440
GeneID:485651 KEGG:cfa:485651 Uniprot:F1PLA4
Length = 818
Score = 203 (76.5 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 50/143 (34%), Positives = 72/143 (50%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLT 140
Q + S++ E+ +L+ +++EHDAY MF LM ++ S F H G T
Sbjct: 221 QAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFST---FEHDGQKGKET 277
Query: 141 CLLP---------------VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVL 185
+ P V + + HLL D L+ HL L + PQ +GLRW+R+L
Sbjct: 278 LMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLL 337
Query: 186 FGREFSLGDLLIIWDEIFASDSS 208
FGREF L DLL++WD +FA S
Sbjct: 338 FGREFPLQDLLVVWDALFADGLS 360
Score = 63 (27.2 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP++++LH D
Sbjct: 205 MHELLAPIVFILHCD 219
Score = 46 (21.3 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVS 471
KD IL+ S +Q +EAE Q +++ + C+S + G S++ +S
Sbjct: 670 KD-ILKGSLRFNQSQLEAEENEQITISDDHYCSSGQ----GQGQSDQMPRTTKQASSETP 724
Query: 472 GAND 475
G D
Sbjct: 725 GHMD 728
Score = 38 (18.4 bits), Expect = 8.8e-14, Sum P(3) = 8.8e-14
Identities = 23/107 (21%), Positives = 41/107 (38%)
Query: 373 ESDPTPRTVDNGTKHSRSSIRRSLLED---LSKELGFEEDSEKDGILEVSTEKDQPSVEA 429
+SD PRT + + + R +D +SKE +E G + + ++ +
Sbjct: 708 QSDQMPRTTKQASSETPGHMDRGSADDFILVSKE---DEGGSAKGSFSGQAQPLR-TLRS 763
Query: 430 EVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVSGANDN 476
R + + R SD L G A + S+ S S + D+
Sbjct: 764 TCGRSEPLARSPLVFSDP--LMGPASASSSNPSSSPDEDSSSNSKDS 808
>ZFIN|ZDB-GENE-040426-1197 [details] [associations]
symbol:tbc1d5 "TBC1 domain family, member 5"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 ZFIN:ZDB-GENE-040426-1197 GO:GO:0005622 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 GeneTree:ENSGT00510000046400
EMBL:BX927400 Ensembl:ENSDART00000140711 Uniprot:J9JI17
Length = 863
Score = 189 (71.6 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 47/139 (33%), Positives = 67/139 (48%)
Query: 81 QTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMVGSQ------------GSVSMAD 128
Q S+ E+ ++L KF EHDAY MF LM ++ G M
Sbjct: 214 QAFQHASETANPSDEMKVLLDPKFHEHDAYTMFSLLMETAEPWFSSFEREVRKGKEEMLT 273
Query: 129 FFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGR 188
+ S + V + + L+ D L+ HL L + PQ +G+RW+R+LFGR
Sbjct: 274 SIPFARPQDSGPSVAIVTKVNRIQDQLIKKHDIELYMHLNRLEIAPQIYGIRWVRLLFGR 333
Query: 189 EFSLGDLLIIWDEIFASDS 207
EF L DLL++WD +FA DS
Sbjct: 334 EFPLQDLLVVWDALFA-DS 351
Score = 71 (30.1 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 232 LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 265
L+ + V+M+LYIR +L+A+ N TCL L+++P
Sbjct: 356 LVDYVFVAMLLYIRDALIAS-NFQTCLGLLMHYP 388
Score = 48 (22.0 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 497 QSHTMPESPPLPVSQTPDDIVKD---SQSNNDS---LEKSQTVRKVLSGK 540
+ H M SPPLPVS+ D S + DS + +S++ K ++ K
Sbjct: 573 RDHAM-SSPPLPVSRGRDSSTSSPPSSATKKDSFFNISRSRSHSKTINKK 621
>FB|FBgn0038129 [details] [associations]
symbol:CG8449 species:7227 "Drosophila melanogaster"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 EMBL:AE014297 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 FlyBase:FBgn0038129 EMBL:BT023950
RefSeq:NP_731780.1 UniGene:Dm.20756 SMR:Q9VFX6 IntAct:Q9VFX6
MINT:MINT-281361 EnsemblMetazoa:FBtr0082778 GeneID:41628
KEGG:dme:Dmel_CG8449 UCSC:CG8449-RA InParanoid:Q9VFX6 OMA:MCYRQGM
GenomeRNAi:41628 NextBio:824714 Uniprot:Q9VFX6
Length = 654
Score = 157 (60.3 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 41/122 (33%), Positives = 62/122 (50%)
Query: 99 VLSEKFMEHDAYCMFDALMVGSQGSVSMADFF----------AHSHADGSLTCLLPVI-E 147
VL ++E D Y +F LM + +++ A S D + VI +
Sbjct: 229 VLDPAYLEADTYSLFSRLMASVESYYRVSNLVSTPGGHIEQRAESPGDNETSTEAEVIGQ 288
Query: 148 ASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDS 207
+ +L+ D LH +L ++ + FG+RWLR+LFGREF L DLL++WD IFA DS
Sbjct: 289 LNFIRDKILAKQDQHLHHYLQKMEIPLHIFGIRWLRLLFGREFMLLDLLLLWDAIFA-DS 347
Query: 208 SK 209
+
Sbjct: 348 DR 349
Score = 59 (25.8 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 238 VSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKII 274
V+M+++IR LL ++ TT L L+ +P N+++ ++
Sbjct: 358 VAMLVHIRDKLLLSDY-TTSLTYLMRYPNNVDVHLVL 393
Score = 41 (19.5 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 527 LEKSQTVRKVLSGKFQWFWKFGRNSAGEETS 557
L+ +QTV K+ K Q + R+ G++ +
Sbjct: 494 LKNAQTVIKIARSKLQSYLSTVRHHVGKQAN 524
>UNIPROTKB|G4N545 [details] [associations]
symbol:MGG_05216 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 EMBL:CM001233
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
RefSeq:XP_003712763.1 EnsemblFungi:MGG_05216T0 GeneID:2675618
KEGG:mgr:MGG_05216 Uniprot:G4N545
Length = 821
Score = 150 (57.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 99 VLSEKFMEHDAYCMFDALMVG----------SQGSVSMADFFAHSHADGSLTCLLPVIEA 148
+L F+EHD++ +F A+M SQ S+ A + S T ++E
Sbjct: 194 MLDSYFVEHDSFALFSAVMQNAKVFYEVKSDSQSGSSLGSTPAVATTTTS-TEQSAIVER 252
Query: 149 SSAMYHL-LSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASD 206
S ++ + L D L +HL + + PQ F +RW+R+LFGREF L++WD +FA D
Sbjct: 253 SRQVHEVTLMKVDPELSTHLSSVDILPQIFLIRWIRLLFGREFPFEQQLVLWDTMFAFD 311
Score = 65 (27.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 1 MHELLAPLLYVLHVD-VERLSQVRNEHEDHFTDKFDGLSFHEND 43
MHELLAP++Y +H D V+R + + + D F E+D
Sbjct: 161 MHELLAPMVYAVHQDAVDRTAATEALADPTMVEMLDSY-FVEHD 203
>WB|WBGene00007167 [details] [associations]
symbol:rbg-3 species:6239 "Caenorhabditis elegans"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0032313 "regulation
of Rab GTPase activity" evidence=IEA] [GO:0019915 "lipid storage"
evidence=IMP] [GO:0005096 "GTPase activator activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005737
GO:GO:0005096 GO:GO:0019915 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 GeneTree:ENSGT00510000046400 EMBL:Z37983
eggNOG:NOG302382 PIR:T18736 RefSeq:NP_497979.1
ProteinModelPortal:Q17491 DIP:DIP-25279N IntAct:Q17491
MINT:MINT-1064847 STRING:Q17491 PaxDb:Q17491
EnsemblMetazoa:B0393.2.1 EnsemblMetazoa:B0393.2.2
EnsemblMetazoa:B0393.2.3 GeneID:175629 KEGG:cel:CELE_B0393.2
UCSC:B0393.2.1 CTD:175629 WormBase:B0393.2 HOGENOM:HOG000122344
InParanoid:Q17491 OMA:YLEQDSY NextBio:888968 Uniprot:Q17491
Length = 585
Score = 146 (56.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 154 HLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKD 213
+LL D +L HL L + PQ +G+RWLR+LFGRE L DLL +WD +
Sbjct: 270 NLLHEIDPTLAKHLSTLDIPPQLYGIRWLRLLFGRELPLHDLLFLWDVL----------- 318
Query: 214 TEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 265
++ P L M VS+++ IR LL+++ CLQ L+ +P
Sbjct: 319 ----------LIDRPIAPLAKCMFVSLLVQIRHLLLSSDYGG-CLQYLMRYP 359
Score = 64 (27.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 1 MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLD 55
MHE+LAPL++V++ D E + D+ L+ E D+ K++L+
Sbjct: 165 MHEILAPLIFVIYSDNEAFQHAKEN------DELKMLTVEEEDILNCLFCKEYLE 213
>UNIPROTKB|Q17491 [details] [associations]
symbol:rbg-3 "Protein RBG-3" species:6239 "Caenorhabditis
elegans" [GO:0043547 "positive regulation of GTPase activity"
evidence=IDA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 GO:GO:0005737 GO:GO:0005096 GO:GO:0019915
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 EMBL:Z37983 eggNOG:NOG302382
PIR:T18736 RefSeq:NP_497979.1 ProteinModelPortal:Q17491
DIP:DIP-25279N IntAct:Q17491 MINT:MINT-1064847 STRING:Q17491
PaxDb:Q17491 EnsemblMetazoa:B0393.2.1 EnsemblMetazoa:B0393.2.2
EnsemblMetazoa:B0393.2.3 GeneID:175629 KEGG:cel:CELE_B0393.2
UCSC:B0393.2.1 CTD:175629 WormBase:B0393.2 HOGENOM:HOG000122344
InParanoid:Q17491 OMA:YLEQDSY NextBio:888968 Uniprot:Q17491
Length = 585
Score = 146 (56.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 154 HLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKD 213
+LL D +L HL L + PQ +G+RWLR+LFGRE L DLL +WD +
Sbjct: 270 NLLHEIDPTLAKHLSTLDIPPQLYGIRWLRLLFGRELPLHDLLFLWDVL----------- 318
Query: 214 TEDDAGSGFGILSSPRGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 265
++ P L M VS+++ IR LL+++ CLQ L+ +P
Sbjct: 319 ----------LIDRPIAPLAKCMFVSLLVQIRHLLLSSDYGG-CLQYLMRYP 359
Score = 64 (27.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 1 MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLD 55
MHE+LAPL++V++ D E + D+ L+ E D+ K++L+
Sbjct: 165 MHEILAPLIFVIYSDNEAFQHAKEN------DELKMLTVEEEDILNCLFCKEYLE 213
>ASPGD|ASPL0000071497 [details] [associations]
symbol:AN4537 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 GO:GO:0005622 EMBL:BN001303
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
EMBL:AACD01000078 OrthoDB:EOG4BS0W6 RefSeq:XP_662141.1
ProteinModelPortal:Q5B4J3 EnsemblFungi:CADANIAT00005901
GeneID:2872337 KEGG:ani:AN4537.2 HOGENOM:HOG000184222 OMA:MIDILFI
Uniprot:Q5B4J3
Length = 684
Score = 145 (56.1 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 99 VLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSV 158
+L +F+EHDA+ +F ++M Q + + H +G L P++ Y L +
Sbjct: 157 LLDSEFIEHDAFSLFCSVM---QSTRVYYEHNTHRSMNGQADAL-PIV----LRY--LEL 206
Query: 159 ADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFA 204
AD HL L + PQ F RW+R+LFGREF D+L IWD +FA
Sbjct: 207 AD-----HLQALEILPQIFLTRWMRLLFGREFPFQDMLAIWDLLFA 247
Score = 54 (24.1 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 229 RGALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 265
R LI + V+M+L +R LL++++++ L LL +P
Sbjct: 251 RSELIDFVCVAMLLRVRWELLSSDSSSA-LTTLLRYP 286
Score = 52 (23.4 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MHELLAPLLYVLHVD 15
MHELLAP+L+V+ D
Sbjct: 120 MHELLAPILWVVDRD 134
Score = 40 (19.1 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 298 GVYNQNNPMVVRGSSLPSE 316
G+Y + NP RGS + S+
Sbjct: 300 GLYLEQNPTAERGSFIISK 318
>DICTYBASE|DDB_G0281891 [details] [associations]
symbol:DDB_G0281891 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0281891
GenomeReviews:CM000152_GR GO:GO:0005622 EMBL:AAFI02000043
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 ProtClustDB:CLSZ2846777
RefSeq:XP_640484.1 ProteinModelPortal:Q54TA5
EnsemblProtists:DDB0235326 GeneID:8623298 KEGG:ddi:DDB_G0281891
eggNOG:NOG302382 InParanoid:Q54TA5 OMA:IDLERTH Uniprot:Q54TA5
Length = 1016
Score = 146 (56.5 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 35/87 (40%), Positives = 47/87 (54%)
Query: 118 VGSQGSVSMADFFAHSHADGSLTCLLPVIEASSAMYHLLSVADSSLHSHLVELGVEPQYF 177
V S S S+ D + + S C V++ LL D L+ HL L +EPQ +
Sbjct: 551 VASSSSSSVQD---NEEEELSSKCNDVVLKCKYIHSILLKQKDFELYQHLDSLDIEPQIY 607
Query: 178 GLRWLRVLFGREFSLGDLLIIWDEIFA 204
LRW+R+LFGREF D+L IWD +FA
Sbjct: 608 LLRWIRLLFGREFHFDDVLNIWDALFA 634
Score = 58 (25.5 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 1 MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFD-FKKF 53
MHELLAP++Y+ + + ++ D + + E+D F+ KF
Sbjct: 401 MHELLAPIIYLYNQEYSSYKKLDENSSSTLVDFIYNIKYLEHDTFAIFERLMKF 454
Score = 52 (23.4 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 232 LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFP 265
LI +SM+ YIR LL +++ L+R+ +P
Sbjct: 641 LIDYFCISMLTYIREHLLKSDSIYA-LKRIYKYP 673
Score = 50 (22.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 20/105 (19%), Positives = 43/105 (40%)
Query: 13 HVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTYNFDFKKFLDSMEDEIGSHGNSVKVRS 72
++D +++ ++ E D F E T F + K + G H +
Sbjct: 351 NLDTQKIIKIDLERTHPDNDFFSNPVIREMMATILFVYSKTNGIISYRQGMHELLAPI-- 408
Query: 73 VDELDPEIQTIVQLSDAYGAEGELGIVLSEKFMEHDAYCMFDALM 117
+ + E + +L D + + + + K++EHD + +F+ LM
Sbjct: 409 IYLYNQEYSSYKKL-DENSSSTLVDFIYNIKYLEHDTFAIFERLM 452
>UNIPROTKB|F1LXN3 [details] [associations]
symbol:Tbc1d5 "Protein Tbc1d5" species:10116 "Rattus
norvegicus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 PROSITE:PS50086 SMART:SM00164 RGD:1561626
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
IPI:IPI00777394 Ensembl:ENSRNOT00000061799 ArrayExpress:F1LXN3
Uniprot:F1LXN3
Length = 587
Score = 104 (41.7 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 180 RWLRVLFGREFSLGDLLIIWDEIFA 204
RW+R+LFGREF L DLL++WD +FA
Sbjct: 115 RWVRLLFGREFPLQDLLVVWDALFA 139
Score = 68 (29.0 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 231 ALIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKKIIGK 276
+L+ + +M+LYIR +L+++ N TCL L+++P+ ++ +I K
Sbjct: 145 SLVDYVFTAMLLYIRDALISS-NYQTCLGLLMHYPLIGDIHSLILK 189
Score = 52 (23.4 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 340 HKAEEQRHDSSGKQNQTQKKRWLEKVKLRLSRTESDPTPRTVDNGTKHSRSS 391
H +++QR +Q Q Q+++ ++ + RL ++ES P K SS
Sbjct: 288 HHSQQQRQQQQQQQQQQQQQQ--QQQQQRLMKSESMPVQLNKGQSPKTISSS 337
Score = 48 (22.0 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 412 KDGILEVSTEKDQPSVEAEVQRQDSVNREFACTSDERYLTGNAGSEESSSIFSDPASPVS 471
KD IL+ S +Q +EAE Q ++ + C+S + G G + S+
Sbjct: 444 KD-ILKGSLRFNQSQLEAEENEQITIADDHYCSSGQDQ--GTQGPRAAKQASSEMPGCTG 500
Query: 472 GANDNE 477
GA ++
Sbjct: 501 GATSDD 506
Score = 37 (18.1 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 370 SRTESDPTPRTVDNGTKHSRSSIRRSLLEDLSKELGFEEDSEKD 413
S T+ D + HS++ R+ E+L ++ F + D
Sbjct: 356 SATKRDSFFSHIARSRSHSKAMGRKESEEELEAQISFLQGQLND 399
>WB|WBGene00009726 [details] [associations]
symbol:tbc-13 species:6239 "Caenorhabditis elegans"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0032313 "regulation
of Rab GTPase activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
HSSP:Q08484 GeneTree:ENSGT00510000046400 EMBL:Z68117
HOGENOM:HOG000006332 OMA:MELYLKL PIR:T22230 RefSeq:NP_510095.2
ProteinModelPortal:Q20436 SMR:Q20436 PaxDb:Q20436
EnsemblMetazoa:F45E6.3 GeneID:181406 KEGG:cel:CELE_F45E6.3
UCSC:F45E6.3 CTD:181406 WormBase:F45E6.3 InParanoid:Q20436
NextBio:913798 Uniprot:Q20436
Length = 459
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 146 IEAS-SAMYHLLSVADSSLHSHL-VELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIF 203
IE+S SA ++L+S D+ LH HL + L ++PQ++ RWL +L +EF L D++ +WD +F
Sbjct: 308 IESSMSAFHNLISTFDTELHKHLTLTLEIKPQFYAFRWLSLLLSQEFPLPDVITLWDALF 367
Query: 204 ASDSSK 209
SD +
Sbjct: 368 -SDPQR 372
>DICTYBASE|DDB_G0280253 [details] [associations]
symbol:DDB_G0280253 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0280253
GenomeReviews:CM000152_GR GO:GO:0005622 EMBL:AAFI02000035
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
RefSeq:XP_641332.1 ProteinModelPortal:Q54VM3
EnsemblProtists:DDB0235314 GeneID:8622466 KEGG:ddi:DDB_G0280253
InParanoid:Q54VM3 OMA:ISHDISR ProtClustDB:CLSZ2846777
Uniprot:Q54VM3
Length = 1173
Score = 142 (55.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 56/224 (25%), Positives = 101/224 (45%)
Query: 1 MHELLAPLLYVLHVDVERLSQVRNEHEDHFTDKFDGLSFHENDLTY-NFDFKKFLDSMED 59
M+E+LAP+LY ++ D H + D F ++ + + Y +FDF F +
Sbjct: 516 MNEILAPILYSVYND---------SHWFNNRDVFSKKNYDKKNKQYEHFDFV-FDQQYQQ 565
Query: 60 EIGSHGNSVKVRSVDELDPEIQTIVQLSDAYGAEGELGIVLSE-KFMEHDAYCMFDALM- 117
+ G + + + + +G +G L + ++ EHD+Y +F++LM
Sbjct: 566 DYYPDGPIQYPTNSNNFNGAGSS-GSGGSVSRKDGGIGAFLRDPQYFEHDSYFIFESLMT 624
Query: 118 -VGS---------------QGSVS-MADFFAHSHADGSLTCLLPVIEASSAMYHLLSVAD 160
VG QG + D +D ++ + V++ M+ L +
Sbjct: 625 IVGKWFTSPPSSPQPPPRVQGQFKKLYDLSERDASDQAVNIV--VVDQCLRMFEDLKFIE 682
Query: 161 SSLHSHLVE-LGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIF 203
L+S+L + LG+EP + LRW+R++ + F L LLI+WD IF
Sbjct: 683 PQLYSYLKQDLGIEPHLYSLRWIRIILAQVFPLDSLLILWDSIF 726
>UNIPROTKB|B3KW04 [details] [associations]
symbol:TBC1D13 "TBC1 domain family member 13" species:9606
"Homo sapiens" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
EMBL:CH471090 GO:GO:0005622 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 EMBL:AL441992 UniGene:Hs.3376 HGNC:HGNC:25571
HOVERGEN:HBG058240 ChiTaRS:TBC1D13 EMBL:AK123828 IPI:IPI01014692
SMR:B3KW04 STRING:B3KW04 Ensembl:ENST00000539497 Uniprot:B3KW04
Length = 219
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDS 207
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA D+
Sbjct: 110 VYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDN 165
>TAIR|locus:2058228 [details] [associations]
symbol:AT2G43490 species:3702 "Arabidopsis thaliana"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0032313 "regulation of Rab GTPase
activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 EMBL:CP002685 GO:GO:0005622
EMBL:AC002335 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
IPI:IPI00895667 RefSeq:NP_001118514.1 RefSeq:NP_001118515.1
RefSeq:NP_181877.2 UniGene:At.36887 ProteinModelPortal:B3H765
PRIDE:B3H765 EnsemblPlants:AT2G43490.1 EnsemblPlants:AT2G43490.2
EnsemblPlants:AT2G43490.3 GeneID:818950 KEGG:ath:AT2G43490
TAIR:At2g43490 OMA:FCGLTRS PhylomeDB:B3H765 Genevestigator:B3H4N2
Uniprot:B3H765
Length = 745
Score = 130 (50.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 145 VIEASSAMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFA 204
V++ +++H+L + D + SHL +G E +F R L VLF RE S + L +W+ ++A
Sbjct: 445 VMDQLQSLWHILQITDKDIFSHLSRIGAESLHFAFRMLLVLFRRELSFNEALRMWEMMWA 504
Query: 205 SD-SSKVNKDTEDD 217
+D V + E+D
Sbjct: 505 ADYDESVTETLEND 518
>UNIPROTKB|E2RQB4 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 EMBL:AAEX03006852
RefSeq:XP_537821.3 Ensembl:ENSCAFT00000031883 GeneID:480702
KEGG:cfa:480702 NextBio:20855687 Uniprot:E2RQB4
Length = 400
Score = 126 (49.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDS 207
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA D+
Sbjct: 291 VYSTLKDRDMELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDN 346
>UNIPROTKB|J9NWF3 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 OMA:MELYLKL EMBL:AAEX03006852
Ensembl:ENSCAFT00000047888 Uniprot:J9NWF3
Length = 403
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDS 207
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA D+
Sbjct: 294 VYSTLKDRDMELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDN 349
>UNIPROTKB|E1BXI8 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 OMA:MELYLKL
EMBL:AADN02026622 EMBL:AADN02026623 IPI:IPI00577808
RefSeq:XP_001233464.1 RefSeq:XP_003642308.1 UniGene:Gga.13409
UniGene:Gga.53693 Ensembl:ENSGALT00000007398 GeneID:100859585
GeneID:771771 KEGG:gga:100859585 KEGG:gga:771771 NextBio:20921966
Uniprot:E1BXI8
Length = 399
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASD 206
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA D
Sbjct: 290 VYSTLKEKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADD 344
>UNIPROTKB|Q9NVG8 [details] [associations]
symbol:TBC1D13 "TBC1 domain family member 13" species:9606
"Homo sapiens" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
EMBL:CH471090 GO:GO:0005622 eggNOG:COG5210 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 EMBL:AL441992 EMBL:AB449899
EMBL:AK001605 EMBL:AK289777 EMBL:BC132817 IPI:IPI00301216
IPI:IPI00647082 RefSeq:NP_060671.3 UniGene:Hs.3376
ProteinModelPortal:Q9NVG8 SMR:Q9NVG8 STRING:Q9NVG8
PhosphoSite:Q9NVG8 DMDM:308153549 PaxDb:Q9NVG8 PRIDE:Q9NVG8
DNASU:54662 Ensembl:ENST00000223865 Ensembl:ENST00000372648
GeneID:54662 KEGG:hsa:54662 UCSC:uc010myj.3 UCSC:uc010myk.3
CTD:54662 GeneCards:GC09P131549 H-InvDB:HIX0008436 HGNC:HGNC:25571
HPA:HPA045865 neXtProt:NX_Q9NVG8 PharmGKB:PA134898118
HOGENOM:HOG000006332 HOVERGEN:HBG058240 OMA:MELYLKL
PhylomeDB:Q9NVG8 ChiTaRS:TBC1D13 GenomeRNAi:54662 NextBio:57202
ArrayExpress:Q9NVG8 Bgee:Q9NVG8 CleanEx:HS_TBC1D13
Genevestigator:Q9NVG8 GermOnline:ENSG00000107021 Uniprot:Q9NVG8
Length = 400
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDS 207
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA D+
Sbjct: 291 VYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDN 346
>UNIPROTKB|F1RR65 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 OMA:MELYLKL EMBL:FP236218
Ensembl:ENSSSCT00000006223 Uniprot:F1RR65
Length = 400
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDS 207
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA D+
Sbjct: 291 VYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDN 346
>UNIPROTKB|F1MXD4 [details] [associations]
symbol:TBC1D13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 OMA:MELYLKL
EMBL:DAAA02032186 IPI:IPI01001850 RefSeq:NP_001193644.1
UniGene:Bt.45171 Ensembl:ENSBTAT00000016559 GeneID:509584
KEGG:bta:509584 NextBio:20869031 Uniprot:F1MXD4
Length = 399
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSK 209
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA DS++
Sbjct: 290 VYSTLKDKDMELYLKLQEQNIKPQFFAFRWLTLLLSQEFVLPDVIRIWDSLFA-DSNR 346
>FB|FBgn0035916 [details] [associations]
symbol:GAPsec "GTPase activating protein, SECIS-dependent
read-through" species:7227 "Drosophila melanogaster" [GO:0005097
"Rab GTPase activator activity" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0001514 "selenocysteine
incorporation" evidence=IDA] [GO:0006451 "translational
readthrough" evidence=IDA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 HSSP:Q08484
GO:GO:0006451 EMBL:AY058542 ProteinModelPortal:Q95TT8 SMR:Q95TT8
PaxDb:Q95TT8 PRIDE:Q95TT8 FlyBase:FBgn0035916 InParanoid:Q95TT8
OrthoDB:EOG4BVQ93 ArrayExpress:Q95TT8 Bgee:Q95TT8 Uniprot:Q95TT8
Length = 403
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 106 EHDAYCMFDALMVGSQGSVSMADFFAHS--HADGSLTCLLPVIEASSAMYHLLSVADSSL 163
E D + F ALM S+ + DFF + A+G + ++ + + ++L D S+
Sbjct: 261 EADCFFCFTALM--SE----IRDFFIKTLDDAEGGIKFMM------ARLSNMLKSKDLSI 308
Query: 164 HSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASD 206
+ L + PQY+ RWL +L +EF L D+L IWD +FA +
Sbjct: 309 YELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFADE 351
>POMBASE|SPAC1952.17c [details] [associations]
symbol:SPAC1952.17c "GTPase activating protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005097
"Rab GTPase activator activity" evidence=ISM] [GO:0005829 "cytosol"
evidence=IDA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=ISM] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 PomBase:SPAC1952.17c GO:GO:0005829 EMBL:CU329670
eggNOG:COG5210 GO:GO:0005097 SUPFAM:SSF47923 RefSeq:NP_594819.2
ProteinModelPortal:Q9URY3 EnsemblFungi:SPAC1952.17c.1
GeneID:2542551 KEGG:spo:SPAC1952.17c OMA:NERISKF OrthoDB:EOG4P2TC2
NextBio:20803603 Uniprot:Q9URY3
Length = 619
Score = 119 (46.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 98 IVLSEKFMEHDAYCMFDALMVGSQGSVSMADFFAHS--H-ADGSLTCLLPVIEASSAMYH 154
++ ++ E+ C DA + +Q V + D + + H +D + L+ S
Sbjct: 282 VLATDPTYENYYLCECDAFFLFTQMMVQVRDLYEKTLDHDSDHGIHFLM------SKFTE 335
Query: 155 LLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFASDSSKVNKDT 214
L D L +L E + P Y+ RW L +EF L D++ +WD I A D K
Sbjct: 336 RLKKYDYELWENLEEKQIHPTYYSFRWFTCLLSQEFPLPDVIRLWDSIIA-DQMKARLFG 394
Query: 215 EDDAGSGFGILSSPRGA--LIAAMAVSMMLYIRSSLLATENATTCLQRLLNFPVNINLKK 272
++D GF GA + S+++ +R S+L A + +LL N+++ K
Sbjct: 395 KND--DGFN------GAYDFLMDFCCSILIELRESILERNFADSI--KLLQAHFNVDMPK 444
Query: 273 IIGKT 277
++ T
Sbjct: 445 LLNLT 449
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 1 MHELLAPLLYVLHVD 15
M+E+LAPL YVL D
Sbjct: 272 MNEILAPLYYVLATD 286
>RGD|1591937 [details] [associations]
symbol:Tbc1d13 "TBC1 domain family, member 13" species:10116
"Rattus norvegicus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
RGD:1591937 GO:GO:0005622 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 GeneTree:ENSGT00510000046400 CTD:54662
OrthoDB:EOG4KH2V1 IPI:IPI00373585 RefSeq:XP_001077153.1
RefSeq:XP_575106.2 PRIDE:D4AEG7 Ensembl:ENSRNOT00000021431
GeneID:499768 KEGG:rno:499768 UCSC:RGD:1591937 NextBio:703946
Uniprot:D4AEG7
Length = 400
Score = 119 (46.9 bits), Expect = 0.00056, P = 0.00056
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFA 204
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA
Sbjct: 291 VYSTLKEKDVELYLKLQEQSIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFA 343
>MGI|MGI:2385326 [details] [associations]
symbol:Tbc1d13 "TBC1 domain family, member 13" species:10090
"Mus musculus" [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 MGI:MGI:2385326 GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00510000046400 CTD:54662 HOGENOM:HOG000006332
HOVERGEN:HBG058240 OMA:MELYLKL EMBL:BC025586 IPI:IPI00153730
RefSeq:NP_666364.1 UniGene:Mm.19172 UniGene:Mm.490985
ProteinModelPortal:Q8R3D1 SMR:Q8R3D1 PhosphoSite:Q8R3D1
PaxDb:Q8R3D1 PRIDE:Q8R3D1 Ensembl:ENSMUST00000044556 GeneID:70296
KEGG:mmu:70296 InParanoid:Q8R3D1 OrthoDB:EOG4KH2V1 NextBio:331332
Bgee:Q8R3D1 CleanEx:MM_TBC1D13 Genevestigator:Q8R3D1
GermOnline:ENSMUSG00000039678 Uniprot:Q8R3D1
Length = 400
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 152 MYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFA 204
+Y L D L+ L E ++PQ+F RWL +L +EF L D++ IWD +FA
Sbjct: 291 VYSTLKDKDVELYLKLQEQSIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFA 343
>ZFIN|ZDB-GENE-080204-86 [details] [associations]
symbol:tbc1d13 "TBC1 domain family, member 13"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 ZFIN:ZDB-GENE-080204-86 GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 CTD:54662
HOVERGEN:HBG058240 OrthoDB:EOG4KH2V1 EMBL:BC155093 IPI:IPI00613190
RefSeq:NP_001107894.1 UniGene:Dr.89520 ProteinModelPortal:A9JSV4
GeneID:561380 KEGG:dre:561380 NextBio:20883897 Uniprot:A9JSV4
Length = 414
Score = 118 (46.6 bits), Expect = 0.00077, P = 0.00077
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 151 AMYHLLSVADSSLHSHLVELGVEPQYFGLRWLRVLFGREFSLGDLLIIWDEIFA 204
+++ L D+ L+ L E ++PQYF RWL +L +EF L D++ IWD +F+
Sbjct: 290 SVFSRLKQKDTELYIRLQEQNIKPQYFTFRWLTLLLSQEFLLPDVIRIWDSLFS 343
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 641 595 0.00084 120 3 11 23 0.46 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 615 (65 KB)
Total size of DFA: 324 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.89u 0.10s 59.99t Elapsed: 00:00:03
Total cpu time: 59.89u 0.10s 59.99t Elapsed: 00:00:03
Start: Tue May 21 11:01:12 2013 End: Tue May 21 11:01:15 2013