Query 006547
Match_columns 641
No_of_seqs 165 out of 835
Neff 8.3
Searched_HMMs 13730
Date Tue Mar 26 19:05:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006547.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_2173-2177//hhsearch_scop/006547hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qtva3 c.62.1.2 (A:120-390) S 100.0 0 0 353.7 23.2 246 120-376 1-271 (271)
2 d1pd0a3 c.62.1.2 (A:301-552) S 100.0 0 0 339.2 15.6 238 119-378 1-252 (252)
3 d1pd0a5 g.41.10.1 (A:216-300) 99.8 6.1E-22 4.4E-26 146.8 4.9 70 46-115 9-84 (85)
4 d1pd0a1 a.71.2.1 (A:647-753) S 99.8 1.5E-18 1.1E-22 126.5 10.4 98 464-571 10-107 (107)
5 d1pd0a2 b.2.8.1 (A:133-215,A:5 99.7 1.7E-18 1.2E-22 126.2 8.6 79 376-461 81-159 (177)
6 d2qtva5 g.41.10.1 (A:45-119) S 99.7 1.5E-18 1.1E-22 126.5 3.6 65 47-112 6-74 (75)
7 d2qtva1 a.71.2.1 (A:524-626) S 99.7 4.4E-17 3.2E-21 117.7 7.8 91 467-571 13-103 (103)
8 d2qtva2 b.2.8.1 (A:2-44,A:391- 99.2 4.1E-11 3E-15 81.8 8.6 85 377-461 50-157 (176)
9 d1q0pa_ c.62.1.1 (A:) Compleme 98.6 2.1E-06 1.5E-10 53.5 14.1 175 124-362 4-192 (209)
10 d1n3ya_ c.62.1.1 (A:) Integrin 98.5 1.8E-06 1.3E-10 53.9 13.1 173 123-374 4-186 (189)
11 d1pd0a4 d.109.2.1 (A:754-926) 98.5 3.6E-08 2.6E-12 64.2 4.0 52 572-623 1-67 (173)
12 d1shux_ c.62.1.1 (X:) Capillar 98.5 8.1E-06 5.9E-10 50.0 15.4 157 121-359 5-163 (181)
13 d1atza_ c.62.1.1 (A:) von Will 98.4 2.3E-05 1.7E-09 47.3 16.6 159 121-362 2-168 (184)
14 d1ijba_ c.62.1.1 (A:) von Will 98.3 6.3E-05 4.6E-09 44.7 16.5 175 122-375 14-196 (202)
15 d1mf7a_ c.62.1.1 (A:) Integrin 98.3 2.1E-05 1.5E-09 47.6 14.0 173 121-374 5-189 (194)
16 d1pt6a_ c.62.1.1 (A:) Integrin 98.3 5.1E-05 3.7E-09 45.2 15.7 171 124-373 4-189 (192)
17 d1jeya2 c.62.1.3 (A:34-253) Ku 98.3 6.4E-05 4.7E-09 44.6 16.2 195 123-374 4-213 (220)
18 d1pd0a2 b.2.8.1 (A:133-215,A:5 98.3 7.4E-08 5.4E-12 62.2 0.9 49 2-57 49-97 (177)
19 d2qtva4 d.109.2.1 (A:627-768) 98.2 4.2E-07 3E-11 57.7 3.6 46 572-621 1-46 (142)
20 d1jeyb2 c.62.1.4 (B:6-241) Ku8 98.1 6.4E-05 4.7E-09 44.6 13.7 148 122-335 3-162 (236)
21 d1v7pc_ c.62.1.1 (C:) Integrin 98.1 4.5E-05 3.3E-09 45.5 12.7 160 124-362 4-177 (193)
22 d2qtva2 b.2.8.1 (A:2-44,A:391- 98.1 8.9E-07 6.5E-11 55.8 3.5 35 2-36 10-44 (176)
23 d1mjna_ c.62.1.1 (A:) Integrin 98.1 0.00011 7.9E-09 43.2 14.1 164 123-372 4-177 (179)
24 d1tyeb2 c.62.1.1 (B:107-354) I 97.7 0.00093 6.8E-08 37.6 13.3 217 121-367 5-235 (248)
25 d2fh1a3 d.109.1.1 (A:629-741) 96.8 0.00064 4.6E-08 38.6 4.5 52 569-621 9-62 (113)
26 d1yvra2 c.62.1.5 (A:364-537) 6 96.6 0.0022 1.6E-07 35.4 5.6 105 120-285 4-114 (174)
27 d1svya_ d.109.1.1 (A:) Severin 96.5 0.0018 1.3E-07 35.8 5.0 50 570-621 2-51 (102)
28 d2fh1a2 d.109.1.1 (A:533-628) 96.2 0.0024 1.8E-07 35.1 4.1 50 571-621 3-53 (96)
29 d1j72a2 d.109.1.1 (A:125-240) 95.9 0.0045 3.3E-07 33.5 4.5 49 571-621 11-59 (116)
30 d1j72a3 d.109.1.1 (A:241-347) 94.8 0.016 1.1E-06 30.3 4.2 49 571-621 7-62 (107)
31 d1kcqa_ d.109.1.1 (A:) Gelsoli 94.7 0.013 9.5E-07 30.7 3.5 48 572-621 3-50 (104)
32 d1d0na3 d.109.1.1 (A:263-383) 94.5 0.013 9.4E-07 30.8 3.3 49 571-621 8-63 (121)
33 d2j9ub1 g.41.11.1 (B:115-161) 61.7 0.77 5.6E-05 20.1 -0.0 17 69-85 2-18 (47)
34 d1brfa_ g.41.5.1 (A:) Rubredox 59.0 1.2 8.6E-05 19.0 0.5 28 52-79 4-44 (53)
35 d2akla2 g.41.3.5 (A:3-40) Hypo 56.3 3.7 0.00027 16.0 2.7 29 49-80 2-30 (38)
36 d6rxna_ g.41.5.1 (A:) Rubredox 54.6 1.4 0.0001 18.5 0.3 29 51-79 4-38 (45)
37 d1dx8a_ g.41.5.1 (A:) Rubredox 52.3 1.7 0.00012 18.1 0.4 31 49-79 6-49 (70)
38 d2dsxa1 g.41.5.1 (A:1-52) Rubr 51.8 1.7 0.00012 18.0 0.4 29 51-79 4-45 (52)
39 d1iroa_ g.41.5.1 (A:) Rubredox 49.0 2 0.00015 17.6 0.4 28 52-79 5-45 (53)
40 d1s24a_ g.41.5.1 (A:) Two-iron 48.6 2.4 0.00017 17.2 0.7 28 52-79 6-46 (56)
41 d2gmga1 a.4.5.82 (A:1-105) Hyp 46.3 3.6 0.00026 16.1 1.3 34 49-85 66-99 (105)
42 d1zbdb_ g.50.1.1 (B:) Effector 40.0 5.6 0.00041 14.9 1.5 31 51-81 66-102 (124)
43 d1y0ja1 g.39.1.1 (A:200-238) E 38.1 5.7 0.00041 14.9 1.3 29 50-78 2-31 (39)
44 d2ak3a2 g.41.2.1 (A:125-161) M 32.2 7.1 0.00052 14.3 1.0 27 53-79 5-31 (37)
45 d1akya2 g.41.2.1 (A:131-168) M 32.2 8.1 0.00059 14.0 1.3 28 52-79 4-31 (38)
46 d1ee8a3 g.39.1.8 (A:211-266) D 31.3 10 0.00074 13.4 1.7 30 51-81 26-56 (56)
47 d1hk8a_ c.7.1.3 (A:) Class III 30.0 9.4 0.00069 13.6 1.3 13 211-223 146-158 (561)
48 d1e4va2 g.41.2.1 (A:122-156) M 29.2 8.2 0.0006 13.9 0.9 27 53-79 5-31 (35)
49 d1k3xa3 g.39.1.8 (A:223-262) E 28.6 9.7 0.00071 13.5 1.2 29 50-78 12-40 (40)
50 d1s3ga2 g.41.2.1 (A:126-160) M 25.5 10 0.00074 13.4 0.9 26 53-78 5-30 (35)
51 d3gata_ g.39.1.1 (A:) Erythroi 25.3 9.3 0.00068 13.6 0.6 31 49-79 3-34 (66)
52 d2apob1 g.41.16.1 (B:403-457) 24.9 11 0.00078 13.2 0.9 27 49-83 3-29 (55)
53 d1zina2 g.41.2.1 (A:126-160) M 24.7 11 0.00077 13.3 0.8 26 53-78 5-30 (35)
54 d1b3ta_ d.58.8.1 (A:) Epstein 21.1 16 0.0011 12.2 3.6 34 134-167 109-145 (147)
55 d1r2za3 g.39.1.8 (A:229-274) D 20.4 16 0.0012 12.2 1.2 30 49-78 17-46 (46)
No 1
>d2qtva3 c.62.1.2 (A:120-390) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=0 Score=353.72 Aligned_cols=246 Identities=26% Similarity=0.386 Sum_probs=209.5
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCC-----------
Q ss_conf 995799999788894689999999999997099996999986163389997149966112475079988-----------
Q 006547 120 ARPVYVAAVDLSSSEEFLELTRSALQAALEAVPSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTE----------- 188 (641)
Q Consensus 120 ~~p~~vFvID~s~~~~~l~~~~~~l~~~l~~l~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~----------- 188 (641)
.||+|+|+||+|.++.+++.++++|+++|+.+|++++|||||||+.||||+++.......+++.+....
T Consensus 1 ~Pp~yvFvIDvs~~a~~~~~l~~~l~~~l~~lp~~~~VgiITfd~~v~~y~l~~~~~~~~~v~~g~~~~~~~~~~~~~~~ 80 (271)
T d2qtva3 1 VPPIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEMLTG 80 (271)
T ss_dssp SCCEEEEEEECCSCHHHHHHHHHHHHHHHTTSCTTCEEEEEEESSEEEEEECSCSSCCEEEEEESSSCCCHHHHHHHHHC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCEECCCCCCCCHHHHHHHHHC
T ss_conf 99889999988766788999999999999729998789999979989999788876763302257644578899877511
Q ss_pred ----------CCCCHHHHCC-CCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf ----------5430001002-654-6564355766999999997606898642234555677775568763689999999
Q 006547 189 ----------DTLSLELEDV-MPL-SQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLF 256 (641)
Q Consensus 189 ----------~~~~~dl~d~-~p~-~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~ 256 (641)
..++.+++++ .|. ++|+++++++++.|+++|++|++. .|..+++ .+++||+|+||++|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~e~~~~i~~lL~~L~~~-~~~~~~~--------~~~~~~~G~Al~~A~ 151 (271)
T d2qtva3 81 QKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPD-QWSVPAG--------HRPLRATGSALNIAS 151 (271)
T ss_dssp CC-----------------CCTTCGGGGSEEHHHHHHHHHHHHHHCCCC-CCCCCTT--------BCCCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCC--------CCCCCCHHHHHHHHH
T ss_conf 3556655653345565322467762222005899999999999973017-6667788--------776543378999999
Q ss_pred HHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CH-HHCCCCCCCHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 964100389753116999833899999975435656674469885-10-0015987406999999999883718889441
Q 006547 257 NYLGSEYGNTFALARVFAFLSGPPDHGAGQLDTRRYGEQYASKGE-DA-DRALLPEQTPFYKDLAAVAVQAGVCVDIFAI 334 (641)
Q Consensus 257 ~ll~~~g~~~~~~gkIi~F~~g~pt~GpG~i~~~~~~~~~~~~~~-~~-e~~~~~~~~~fY~~la~~~~~~~isvDif~~ 334 (641)
.+|++..++. ||||++|++|+||+|||+|+.+++++.+|++.+ ++ +.++++++++||++||.+|++++|+||+|++
T Consensus 152 ~ll~~~~~~~--gGkI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~~~~a~~fY~~la~~~~~~~isvDlF~~ 229 (271)
T d2qtva3 152 LLLQGCYKNI--PARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAG 229 (271)
T ss_dssp HHHHHHCTTS--CEEEEEEESSCCCSSSSCSSCSBTTSCCCCHHHHHTTCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHCCCC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
T ss_conf 9998622689--82899994789987884242555444457755223435664215899999999999878947999981
Q ss_pred CCCCCCHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
Q ss_conf 599547120100113551089995789978414899998225
Q 006547 335 TNEYTDLASLKFLSIESGGSLFLYSSTDDSTLPQDIYRMLSR 376 (641)
Q Consensus 335 ~~~~~~i~~l~~l~~~TGG~i~~y~~~~~~~l~~dl~~~l~~ 376 (641)
+.+++|+++|++|++.|||.+++|++|+.+.|+++|+|++.|
T Consensus 230 s~~~~dl~~l~~l~~~TGG~v~~~~~F~~~~f~~~l~r~~~r 271 (271)
T d2qtva3 230 CYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAK 271 (271)
T ss_dssp CSSCCSHHHHTHHHHTTTCCEEEESCTTSHHHHHHHHHTTCB
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 476579598876876078269983896879999999998459
No 2
>d1pd0a3 c.62.1.2 (A:301-552) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=0 Score=339.19 Aligned_cols=238 Identities=19% Similarity=0.317 Sum_probs=203.0
Q ss_pred CCCCEEEEEEECCCCH---HHHHHHHHHHHHHHHHCC---CCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCC
Q ss_conf 9995799999788894---689999999999997099---9969999861633899971499661124750799885430
Q 006547 119 QARPVYVAAVDLSSSE---EFLELTRSALQAALEAVP---SGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLS 192 (641)
Q Consensus 119 ~~~p~~vFvID~s~~~---~~l~~~~~~l~~~l~~l~---~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~ 192 (641)
|+||+|+|+||+|..+ +.+++++++|+++|+.+| ++++|||||||+.||+|+++........++. ..++.++
T Consensus 1 P~Pp~~vFvID~s~~a~~~g~l~~~~~si~~~l~~l~~~~~~~~VgiItf~~~V~~y~l~~~~~~~~~~~~--~~~~~~~ 78 (252)
T d1pd0a3 1 PPPATYCFLIDVSQSSIKSGLLATTINTLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSENNEESAD--QINMMDI 78 (252)
T ss_dssp CCCCBEEEEEECSHHHHHHTHHHHHHHHHHTTTTTSCCTTSCCEECEEEESSSEEEEECCCGGGC---------CEEECC
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCC--CCCCCCH
T ss_conf 99988999998987886663999999999999985737899828999997998899976677655454556--6521112
Q ss_pred HHHHCC-CCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 001002-654-656435576699999999760689864223455567777556876368999999996410038975311
Q 006547 193 LELEDV-MPL-SQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGSEYGNTFALA 270 (641)
Q Consensus 193 ~dl~d~-~p~-~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~~g~~~~~~g 270 (641)
.|++|. +|. ++|+++++|+++.|.++|++|+..+... +.+++|+|+||++|..+|+..| |
T Consensus 79 ~dl~~~~~p~~~~~lv~~~e~~~~i~~~L~~l~~~~~~~------------~~~~~~~G~Al~~a~~~l~~~g------G 140 (252)
T d1pd0a3 79 ADLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSN------------LITNFALGPALKSAYHLIGGVG------G 140 (252)
T ss_dssp CCTTCC-----TTTSEETTTTHHHHHHHHHHHHHHTTTC------------CCCCCCHHHHHHHHHHHHTTTC------E
T ss_pred HHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCHHHCCCC------------CCCCCCHHHHHHHHHHHHHCCC------C
T ss_conf 334430578876304458999999999998570211468------------8875327999999999986379------7
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCCCCC
Q ss_conf 69998338999999754356566744698851000159874069999999998837188894415995471201001135
Q 006547 271 RVFAFLSGPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITNEYTDLASLKFLSIE 350 (641)
Q Consensus 271 kIi~F~~g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~~~~~i~~l~~l~~~ 350 (641)
||++|++|+||.|||++..|+.....+ ..+.++.+++++++||++||.+|++.+|+||+|+++.+++|+++|+.|++.
T Consensus 141 kI~~f~sg~pt~GpG~l~~r~~~~~~~--~~~~~~~~~~~a~~fY~~la~~~~~~~isvdlF~~~~~~~dl~~l~~l~~~ 218 (252)
T d1pd0a3 141 KIIVVSGTLPNLGIGKLQRRNESGVVN--TSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRF 218 (252)
T ss_dssp EEEEEESSCCCSSTTCCCC----------------------CCHHHHHHHHHTTTTEEEEEEEEESBCCCHHHHHHHHHT
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCC--CCCCCHHCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHC
T ss_conf 899994679977886013265522236--764201103606899999999998789789999625655680888657650
Q ss_pred CCEEEEEECCCCCC------CHHHHHHHHHCCCC
Q ss_conf 51089995789978------41489999822585
Q 006547 351 SGGSLFLYSSTDDS------TLPQDIYRMLSRPY 378 (641)
Q Consensus 351 TGG~i~~y~~~~~~------~l~~dl~~~l~~~~ 378 (641)
|||.+++|++|+.. +|.+|+.|+++|++
T Consensus 219 TGG~~~~y~~f~~~~~~d~~k~~~dl~~~l~~~~ 252 (252)
T d1pd0a3 219 TAGQTHFYPGFSGKNPNDIVKFSTEFAKHISMDF 252 (252)
T ss_dssp TTCCEEEEETCCTTSHHHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 7826999589776467789999999997526779
No 3
>d1pd0a5 g.41.10.1 (A:216-300) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=6.1e-22 Score=146.82 Aligned_cols=70 Identities=19% Similarity=0.435 Sum_probs=60.6
Q ss_pred CCCCCCCCCCCCEEEECCCEEEC--CEEEECCCCCCCCCCHHHHCCC----CCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 99998878787703515624536--4459657999978991322024----7976855333322899942899865
Q 006547 46 DGHMLPRCENCYAYFNTYCELEQ--WAWTCSLCGSLNGLSSQAIARY----THPQSCAEMISSFIDLDLPLEGSEE 115 (641)
Q Consensus 46 ~~~~p~RC~~C~ayiNp~~~~~~--~~w~C~lC~~~N~~p~~~~~~~----~~~~~~PEL~~~tve~~~p~~y~~~ 115 (641)
..+.|+||++|+|||||||+|+. ++|+||||++.|++|++|+... .+..+||||++|||||++|++|+.|
T Consensus 9 ~~~~i~RC~~C~ayiNP~~~~~~~g~~w~C~~C~~~N~~p~~y~~~~~~~~~~~~~rPEL~~~tvEy~ap~~Y~~r 84 (85)
T d1pd0a5 9 EDGLIVRCRRCRSYMNPFVTFIEQGRRWRCNFCRLANDVPMQMDQSDPNDPKSRYDRNEIKCAVMEYMAPKEYTLR 84 (85)
T ss_dssp CSCCCCBCSSSCCBCCTTCEEETTTTEEECTTTCCEEECCGGGGC-----CCCGGGSHHHHCSEEEEECCGGGCSS
T ss_pred CCCCCCCCCCCCCEECCCEEEECCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCC
T ss_conf 7998840668748977723891799999898888506898778423567756644595102664899788465226
No 4
>d1pd0a1 a.71.2.1 (A:647-753) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=1.5e-18 Score=126.53 Aligned_cols=98 Identities=18% Similarity=0.278 Sum_probs=85.4
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 89999999406979999999999999999999976320256899755543112247620120889999981382234589
Q 006547 464 LGSVILASLEQGVREGRMLLHDWLVILTAQYNEAFKLVQHNIGNSVTSQIDVEFLQCPQLQRLPRLVFALLRNPLLRFHE 543 (641)
Q Consensus 464 ~~~~~~~~~~~~~~~~r~~l~~~l~~~l~~yr~~~~~~~~~~~~~~~~ql~l~f~lp~~lk~lP~~~~~L~Ks~~l~~~~ 543 (641)
++.++.++.++++.|+|+++++++++++++||++|++. .. ...+|+ .+||++|+||+|+++|+||++|+.++
T Consensus 10 ak~av~~~~~~~l~daR~~l~~~~v~~l~~Yr~~~~~~--~~--~~~~ql----~lPe~lkllP~yil~LlKs~~~r~~~ 81 (107)
T d1pd0a1 10 NSKAVEKALNSSLDDARVLINKSVQDILATYKKEIVVS--NT--AGGAPL----RLCANLRMFPLLMHSLTKHMAFRSGI 81 (107)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHCC---------CCCCC----EEEGGGTTHHHHHHHHHTSTTTCSSC
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC--CC--CCCCCC----CCCHHHHHHHHHHHHHHCCHHCCCCC
T ss_conf 99999998719899999999999999999999864125--88--998442----47587999999999997632126999
Q ss_pred CCCCCHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf 9999149999999990599464463114
Q 006547 544 EGVHPDYRIYLQCLFSALEPSSLQRAVY 571 (641)
Q Consensus 544 ~~~s~D~r~~~~~~l~~~~~~~~~~~iy 571 (641)
+++|+|+|+++++++++++.++.++|
T Consensus 82 --~~~D~R~~~~~~~~~~p~~~l~~~iY 107 (107)
T d1pd0a1 82 --VPSDHRASALNNLESLPLKYLIKNIY 107 (107)
T ss_dssp --CCHHHHHHHHHHHHHSCHHHHHHHHS
T ss_pred --CCCCHHHHHHHHHHCCCHHHHHHHHC
T ss_conf --99159999999997899999998749
No 5
>d1pd0a2 b.2.8.1 (A:133-215,A:553-646) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=1.7e-18 Score=126.16 Aligned_cols=79 Identities=15% Similarity=0.290 Sum_probs=70.5
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCC
Q ss_conf 58531128999658991232455225459998763013205998407999998437777778999767999880353166
Q 006547 376 RPYAFNCIMRLRTSSEFKPGHSYGHFFPDPQYENVQHIICCDSYATYAYDFDFANAAGFARHTSEQPMLQIAFQYTVVVP 455 (641)
Q Consensus 376 ~~~~~~a~~rvR~S~gl~i~~~~G~~~~~~~~~~~~~~~~~~~~~s~~~~~e~~~~~~l~~~~~~~~~iQ~a~lYt~~~g 455 (641)
...+||++||||||+||++.++|||++.++ .++..++.+++|++++++|++++ ++. .+.+|||+|++||+..|
T Consensus 81 l~~a~~~vmRvR~S~Gl~v~~~yGnf~~~s--~d~~~lp~id~d~s~a~el~~d~--~l~---~~~~~~Q~AlLYTs~~G 153 (177)
T d1pd0a2 81 LYDCMETVMRARGSTGLRMSRFYGHFFNRS--SDLCAFSTMPRDQSYLFEVNVDE--SIM---ADYCYVQVAVLLSLNNS 153 (177)
T ss_dssp SSTEEEEEEEEEECTTEEEEEEESSSBCSS--SSCEEEEEECSSCCEEEEEEECS--CCC---SSEEEEEEEEEEEETTT
T ss_pred HHHHHHEEEEEECCCCEEEEEEECCEECCC--CCCEEEEECCCCCEEEEEEEECC--CCC---CCCEEEEEEEEEECCCC
T ss_conf 333101468876389847988775667589--87687762178867999999647--647---87089999998885999
Q ss_pred CCCCCH
Q ss_conf 533311
Q 006547 456 PEELSS 461 (641)
Q Consensus 456 ~~~~~~ 461 (641)
+|++|+
T Consensus 154 eRRIRV 159 (177)
T d1pd0a2 154 QRRIRI 159 (177)
T ss_dssp EEEEEE
T ss_pred CEEEEE
T ss_conf 889999
No 6
>d2qtva5 g.41.10.1 (A:45-119) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.71 E-value=1.5e-18 Score=126.49 Aligned_cols=65 Identities=23% Similarity=0.428 Sum_probs=55.6
Q ss_pred CCCCCCCCC--CCEEEECCCEEEC--CEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 999887878--7703515624536--44596579999789913220247976855333322899942899
Q 006547 47 GHMLPRCEN--CYAYFNTYCELEQ--WAWTCSLCGSLNGLSSQAIARYTHPQSCAEMISSFIDLDLPLEG 112 (641)
Q Consensus 47 ~~~p~RC~~--C~ayiNp~~~~~~--~~w~C~lC~~~N~~p~~~~~~~~~~~~~PEL~~~tve~~~p~~y 112 (641)
.++|+||++ |||||||||+|+. ++|+|+||+..|.+|++|.+ ..+.+.+|||.++||||++|+.+
T Consensus 6 ~~~PvrC~r~~C~ayiNP~~~~~~~~~~W~C~~C~~~N~lP~~Y~~-~~~~~~ppEL~~~tVEyi~p~~~ 74 (75)
T d2qtva5 6 PYNPVVCSGPHCKSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTN-LSQENMPLELQSTTIEYITNKPV 74 (75)
T ss_dssp SSCCCBCCSTTTCCBCCTTCCEETTTTEEECTTTCCEEECCTTTSS-CCTTSCCHHHHCSEEEEEEEEEC
T ss_pred CCCCCEECCCCCCCEECCCEEEECCCCEEEECCCCCCCCCCHHHCC-CCCCCCCCCCCCCCEEEECCCCC
T ss_conf 7799453898987588881388359988984124755769810215-78667683215752898657888
No 7
>d2qtva1 a.71.2.1 (A:524-626) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.68 E-value=4.4e-17 Score=117.66 Aligned_cols=91 Identities=15% Similarity=0.244 Sum_probs=82.3
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999406979999999999999999999976320256899755543112247620120889999981382234589999
Q 006547 467 VILASLEQGVREGRMLLHDWLVILTAQYNEAFKLVQHNIGNSVTSQIDVEFLQCPQLQRLPRLVFALLRNPLLRFHEEGV 546 (641)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~~l~~~l~~yr~~~~~~~~~~~~~~~~ql~l~f~lp~~lk~lP~~~~~L~Ks~~l~~~~~~~ 546 (641)
++-++.++...|+.+|+|+.+++++..|+.+.+ ++|+ +|.||++++++|+|||+||||++++.+| .
T Consensus 13 a~~k~~~e~~~Dv~rwlDr~lIrl~~kFg~y~k----~~p~--------Sf~l~~~fs~~PqfmfhLRRS~flqvfN--~ 78 (103)
T d2qtva1 13 AVHKAETDDGADVIRWLDRTLIKLCQKYADYNK----DDPQ--------SFRLAPNFSLYPQFTYYLRRSQFLSVFN--N 78 (103)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHSEEET----TEEE--------EEECCTTTTTHHHHHHHHHTSTTTCCTT--C
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC----CCCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCC--C
T ss_conf 999870065678999999999999999744557----9962--------1147777776599999995301652458--9
Q ss_pred CCHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf 9149999999990599464463114
Q 006547 547 HPDYRIYLQCLFSALEPSSLQRAVY 571 (641)
Q Consensus 547 s~D~r~~~~~~l~~~~~~~~~~~iy 571 (641)
||||++|+|+.|+++++.+++.||+
T Consensus 79 SPDETa~yR~~l~re~v~nSl~MIQ 103 (103)
T d2qtva1 79 SPDETAFYRHIFTREDTTNSLIMIQ 103 (103)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHC
T ss_conf 9425999999998711145577619
No 8
>d2qtva2 b.2.8.1 (A:2-44,A:391-523) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.19 E-value=4.1e-11 Score=81.79 Aligned_cols=85 Identities=21% Similarity=0.244 Sum_probs=67.8
Q ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCCCCC-C-------------CCEEEEECCCCCEEEEEEEEECCCCCCC------
Q ss_conf 8531128999658991232455225459998-7-------------6301320599840799999843777777------
Q 006547 377 PYAFNCIMRLRTSSEFKPGHSYGHFFPDPQY-E-------------NVQHIICCDSYATYAYDFDFANAAGFAR------ 436 (641)
Q Consensus 377 ~~~~~a~~rvR~S~gl~i~~~~G~~~~~~~~-~-------------~~~~~~~~~~~~s~~~~~e~~~~~~l~~------ 436 (641)
.+|||++|+|+||+++||.+.+|++...+++ . ..|++..+|+.+|++|.||+.+...-+.
T Consensus 50 ~mgFnatlEV~tSkelKV~G~IGpc~Sl~kk~~~~VSdteIG~GgT~~Wk~c~ldp~TT~a~yFev~n~~~~~~p~~~~~ 129 (176)
T d2qtva2 50 KMAFNGNMAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAP 129 (176)
T ss_dssp SCEEEEEEEEEECTTEEEEEEESSCEECCSCCCSCBCSSCSSBCSCSEEEEEEECTTCCEEEEEEECCC-----------
T ss_pred EEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 17844299999679828845552044178757884372000556787548625289988999999337888887655676
Q ss_pred ---CCCCCCEEEEEEEEEECCCCCCCCH
Q ss_conf ---8999767999880353166533311
Q 006547 437 ---HTSEQPMLQIAFQYTVVVPPEELSS 461 (641)
Q Consensus 437 ---~~~~~~~iQ~a~lYt~~~g~~~~~~ 461 (641)
+.....||||.+.|....|++++|+
T Consensus 130 ~~~~~~~~~~iQFiT~Yqh~sG~~RlRV 157 (176)
T d2qtva2 130 GSADRPHLAYTQFITTYQHSSGTNRIRV 157 (176)
T ss_dssp ------CEEEEEEEEEEEETTTEEEEEE
T ss_pred CCCCCCCEEEEEEEEEEECCCCCEEEEE
T ss_conf 6556664179999999997999899999
No 9
>d1q0pa_ c.62.1.1 (A:) Complement factor B domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55 E-value=2.1e-06 Score=53.50 Aligned_cols=175 Identities=11% Similarity=0.102 Sum_probs=100.3
Q ss_pred EEEEEECCCCH--HHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEE-ECCCCCCCEEEEEECCCCCCCCCHHHHC
Q ss_conf 99999788894--68999999999999709---999699998616338999-7149966112475079988543000100
Q 006547 124 YVAAVDLSSSE--EFLELTRSALQAALEAV---PSGALFGLATFSHKIGLY-DVQGAIPVVKNVFIPSDTEDTLSLELED 197 (641)
Q Consensus 124 ~vFvID~s~~~--~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~-~l~~~~~~~~~v~~~~~~~~~~~~dl~d 197 (641)
.+|++|.|.+. ..++.+++++...++.+ +.+.+||+++|++..+.. ++. +.
T Consensus 4 ivfvlD~SgSm~~~~~~~~k~~~~~li~~l~~~~~~~rv~lv~f~~~~~~~~~l~---------------------~~-- 60 (209)
T d1q0pa_ 4 IYLVLDGSDSIGASNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATYPKIWVKVS---------------------EA-- 60 (209)
T ss_dssp EEEEEECSTTTCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSSEEEEECTT---------------------SG--
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCC---------------------CC--
T ss_conf 7999968899885999999999999999610478876799999658505886476---------------------51--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC--CC--C-CEE
Q ss_conf 265465643557669999999976068986422345556777755687636899999999641003897--53--1-169
Q 006547 198 VMPLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGSEYGNT--FA--L-ARV 272 (641)
Q Consensus 198 ~~p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~~g~~~--~~--~-gkI 272 (641)
....+..+...++++....... ...+.++.||+.|...+....+.. .+ . --|
T Consensus 61 ----------~~~~~~~l~~~i~~i~~~~~~~-------------~g~t~~~~al~~a~~~~~~~~~~~~~~~~~~~kvv 117 (209)
T d1q0pa_ 61 ----------DSSNADWVTKQLNEINYEDHKL-------------KSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVI 117 (209)
T ss_dssp ----------GGGCHHHHHHHHHTCCTTSCSC-------------TTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEE
T ss_pred ----------HHHHHHHHHHHHHHHHHCCCCC-------------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf ----------1667899999999721013667-------------88854989999999999752224765667775189
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC-CCCCHHCCCCCCCCC
Q ss_conf 9983389999997543565667446988510001598740699999999988371888944159-954712010011355
Q 006547 273 FAFLSGPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITN-EYTDLASLKFLSIES 351 (641)
Q Consensus 273 i~F~~g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~-~~~~i~~l~~l~~~T 351 (641)
++++.|.++.|.......+..+.. ..... .+..+...| +++|+.+- ..++...|..++..+
T Consensus 118 vl~TDG~~~~~~~~~~~~~~~~~~--------~~~~~--------~~~~~~~~g--i~i~~vgvg~~~~~~~L~~iAs~~ 179 (209)
T d1q0pa_ 118 ILMTDGLHNMGGDPITVIDEIRDL--------LYIGK--------DRKNPREDY--LDVYVFGVGPLVNQVNINALASKK 179 (209)
T ss_dssp EEEECSCCCSSSCTHHHHHHHHHH--------TTCSC--------BTTBCCGGG--EEEEEEECSSCCCHHHHHHHSCCC
T ss_pred EEECCCCCCCCCCHHHHHHHHHHH--------HHHHH--------HHHHHHHCC--CCEEEECCCCCCCHHHHHHHHCCC
T ss_conf 997578766789858999999985--------44378--------999998669--955984277668999999997498
Q ss_pred CEE--EEEECCCC
Q ss_conf 108--99957899
Q 006547 352 GGS--LFLYSSTD 362 (641)
Q Consensus 352 GG~--i~~y~~~~ 362 (641)
+|. ++...+++
T Consensus 180 ~~~~~~f~~~~~~ 192 (209)
T d1q0pa_ 180 DNEQHVFKVKDME 192 (209)
T ss_dssp TTCCCEEETTC--
T ss_pred CCCEEEEEECCHH
T ss_conf 9971599938999
No 10
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.53 E-value=1.8e-06 Score=53.94 Aligned_cols=173 Identities=18% Similarity=0.185 Sum_probs=100.3
Q ss_pred EEEEEEECCCCH--HHHHHHHHHHHHHHHHCC-CCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHCCC
Q ss_conf 799999788894--689999999999997099-99699998616338999714996611247507998854300010026
Q 006547 123 VYVAAVDLSSSE--EFLELTRSALQAALEAVP-SGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLELEDVM 199 (641)
Q Consensus 123 ~~vFvID~s~~~--~~l~~~~~~l~~~l~~l~-~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl~d~~ 199 (641)
=.+|+||.|.+. ..++.+++.++..++.+. ++.+||+|+|++.....- ++.+.
T Consensus 4 DivfvlD~S~Sm~~~~~~~~k~~~~~~i~~l~~~~~rv~vv~fs~~~~~~~-----------------------~l~~~- 59 (189)
T d1n3ya_ 4 DIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHF-----------------------TFEEF- 59 (189)
T ss_dssp EEEEEEECCTTSCHHHHHHHHHHHHHHHTTSCTTTEEEEEEEESSSEEEEE-----------------------CHHHH-
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEC-----------------------CCCCC-
T ss_conf 199999697998869999999999999997089987899999531210100-----------------------23540-
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCCCC-EEEEEEC
Q ss_conf 546564355766999999997606898642234555677775568763689999999964-10038975311-6999833
Q 006547 200 PLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYL-GSEYGNTFALA-RVFAFLS 277 (641)
Q Consensus 200 p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll-~~~g~~~~~~g-kIi~F~~ 277 (641)
. .+..+.+.++.++... +++.+|.||..|...+ ....++....- -++++++
T Consensus 60 ---------~-~~~~~~~~i~~~~~~~-----------------g~t~~~~al~~a~~~~f~~~~~~r~~~~kvivllTD 112 (189)
T d1n3ya_ 60 ---------R-RSSNPLSLLASVHQLQ-----------------GFTYTATAIQNVVHRLFHASYGARRDAAKILIVITD 112 (189)
T ss_dssp ---------H-HCSSGGGGGTTCCCCC-----------------SCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEES
T ss_pred ---------C-CHHHHHHHHHHHHHHH-----------------HHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
T ss_conf ---------0-2889999987543433-----------------001389999999999841112788887327999956
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC---CCCCHHCCCCCCCC-CCE
Q ss_conf 89999997543565667446988510001598740699999999988371888944159---95471201001135-510
Q 006547 278 GPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITN---EYTDLASLKFLSIE-SGG 353 (641)
Q Consensus 278 g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~---~~~~i~~l~~l~~~-TGG 353 (641)
|.++.++. -+.+.+..+...||.+-.+.... ...+..+|..++.. +++
T Consensus 113 G~~~~~~~----------------------------~~~~~~~~~~~~gv~i~~Vgig~~~~~~~~~~~L~~ias~~~~~ 164 (189)
T d1n3ya_ 113 GKKEGDSL----------------------------DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQE 164 (189)
T ss_dssp SCCBSCSS----------------------------CHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGG
T ss_pred CCCCCCCC----------------------------CHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf 89888832----------------------------39999999998799438983365556633399999996699866
Q ss_pred EEEEECCCCC-CCHHHHHHHHH
Q ss_conf 8999578997-84148999982
Q 006547 354 SLFLYSSTDD-STLPQDIYRML 374 (641)
Q Consensus 354 ~i~~y~~~~~-~~l~~dl~~~l 374 (641)
.++..++|+. ..+.+.|.+.+
T Consensus 165 ~~~~~~~~~~l~~i~~~i~~~i 186 (189)
T d1n3ya_ 165 HIFKVEDFDALKDIQNQLKEKI 186 (189)
T ss_dssp GEEEESSGGGGGGGHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHHC
T ss_conf 0898289999999999999751
No 11
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.51 E-value=3.6e-08 Score=64.16 Aligned_cols=52 Identities=13% Similarity=0.243 Sum_probs=37.6
Q ss_pred CCEEEECCCCCC-CC-------------CCC-CCCHHHHCCCCCCEEEEECCCEEEEEECCCCCCCC
Q ss_conf 422860169999-88-------------855-66223230479948998279499999849999999
Q 006547 572 PLLTSYSTPDKQ-AF-------------PRH-SLSRAALITSGSPIFLLDAFTTIIVFYSSTADPTL 623 (641)
Q Consensus 572 P~L~~~~~~~~~-~~-------------~~~-~L~~~~~~~~~~~iyLlD~~~~i~i~~G~~~~~~~ 623 (641)
|+||++|++.++ +. +.| .+.-+...+.++|+||||+|..+|+|+|++|+|++
T Consensus 1 P~ly~lH~l~~~~g~~~~~~~~~~~~~~~lP~~l~lS~e~l~~~G~YLld~G~~~~LwvG~~v~p~l 67 (173)
T d1pd0a4 1 PDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPAL 67 (173)
T ss_dssp CEEEECTTCCSSTTSBC--------CCBCCCCCBCSSGGGCCTTCEEEEECSSCEEEEECTTCCHHH
T ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCEEEEEECCCCCHHH
T ss_conf 9678824787335876555565667853589863663987437978999789999999789999899
No 12
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=8.1e-06 Score=49.98 Aligned_cols=157 Identities=15% Similarity=0.082 Sum_probs=97.7
Q ss_pred CCEEEEEEECCCCH-HHHHHHHHHHHHHHHHCC-CCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHCC
Q ss_conf 95799999788894-689999999999997099-9969999861633899971499661124750799885430001002
Q 006547 121 RPVYVAAVDLSSSE-EFLELTRSALQAALEAVP-SGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLELEDV 198 (641)
Q Consensus 121 ~p~~vFvID~s~~~-~~l~~~~~~l~~~l~~l~-~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl~d~ 198 (641)
+-=.+|+||.|.+. +....+++.+.+.++.+. ++.+||+|+|++..+..- ++.
T Consensus 5 ~~Div~llD~S~Sm~~~~~~~k~~~~~~~~~~~~~~~rvglv~fs~~~~~~~-----------------------~l~-- 59 (181)
T d1shux_ 5 AFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIIL-----------------------PLT-- 59 (181)
T ss_dssp CEEEEEEEECSGGGGGGHHHHHHHHHHHHHHCCCTTEEEEEEEESSSEEEEE-----------------------EEE--
T ss_pred CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEE-----------------------EEC--
T ss_conf 6589999947888533799999999999997268997899999604237999-----------------------724--
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 65465643557669999999976068986422345556777755687636899999999641003897531169998338
Q 006547 199 MPLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGSEYGNTFALARVFAFLSG 278 (641)
Q Consensus 199 ~p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~~g~~~~~~gkIi~F~~g 278 (641)
..++.+.+.++.+...... +++.++.||+.|...+....+.. ....|++++.|
T Consensus 60 -----------~~~~~~~~~l~~l~~~~~~---------------g~t~~~~al~~~~~~~~~~~~~~-~~~~ivliTDG 112 (181)
T d1shux_ 60 -----------GDRGKISKGLEDLKRVSPV---------------GETYIHEGLKLANEQIQKAGGLK-TSSIIIALTDG 112 (181)
T ss_dssp -----------CCHHHHHHHHHHHHTCCCC---------------SCCCHHHHHHHHHHHHHHHTGGG-SCEEEEEEECC
T ss_pred -----------CCHHHHHHHHHHCCCCCCC---------------CCCHHHHHHHHHHHHHHHCCCCC-CCEEEEEECCC
T ss_conf -----------8889999976532223677---------------85068999999998763003578-75289992478
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCCCCCCCEEEEEE
Q ss_conf 99999975435656674469885100015987406999999999883718889441599547120100113551089995
Q 006547 279 PPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITNEYTDLASLKFLSIESGGSLFLY 358 (641)
Q Consensus 279 ~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~~~~~i~~l~~l~~~TGG~i~~y 358 (641)
.++-+. .....+.+..+...++.|-.+.. ...+..+|..++...+ .+++.
T Consensus 113 ~~~~~~---------------------------~~~~~~~~~~~k~~gv~v~~vgi--g~~~~~~L~~ia~~~~-~~~~~ 162 (181)
T d1shux_ 113 KLDGLV---------------------------PSYAEKEAKISRSLGASVYCVGV--LDFEQAQLERIADSKE-QVFPV 162 (181)
T ss_dssp CCCTTH---------------------------HHHHHHHHHHHHHTTCEEEEEEC--SSCCHHHHHHHSSSGG-GEEES
T ss_pred CCCCCC---------------------------CHHHHHHHHHHHHCCCEEEEEEE--CCCCHHHHHHHHCCCC-CEEEE
T ss_conf 778886---------------------------38999999999978988999996--8548999999848999-65994
Q ss_pred C
Q ss_conf 7
Q 006547 359 S 359 (641)
Q Consensus 359 ~ 359 (641)
.
T Consensus 163 ~ 163 (181)
T d1shux_ 163 K 163 (181)
T ss_dssp S
T ss_pred C
T ss_conf 5
No 13
>d1atza_ c.62.1.1 (A:) von Willebrand factor A3 domain, vWA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=2.3e-05 Score=47.29 Aligned_cols=159 Identities=18% Similarity=0.142 Sum_probs=98.4
Q ss_pred CCEEEEEEECCCCH--HHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf 95799999788894--68999999999999709---99969999861633899971499661124750799885430001
Q 006547 121 RPVYVAAVDLSSSE--EFLELTRSALQAALEAV---PSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLEL 195 (641)
Q Consensus 121 ~p~~vFvID~s~~~--~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl 195 (641)
|--.+|+||.|.+. ..++.+++.+...++.+ +.+++||+|+|++..+..- ++
T Consensus 2 PlDivfliD~S~s~~~~~f~~~k~~v~~~i~~~~i~~~~~rv~vv~f~~~~~~~~-----------------------~l 58 (184)
T d1atza_ 2 PLDVILLLDGSSSFPASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSITTIDV-----------------------PW 58 (184)
T ss_dssp CEEEEEEEECSSSSCHHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSSEEEEE-----------------------CT
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEC-----------------------CC
T ss_conf 6689999948899887999999999999999658798875899999842211551-----------------------55
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCC-CCCCEEE
Q ss_conf 002654656435576699999999760689864223455567777556876368999999996410-03897-5311699
Q 006547 196 EDVMPLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGS-EYGNT-FALARVF 273 (641)
Q Consensus 196 ~d~~p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~-~g~~~-~~~gkIi 273 (641)
.+ + ..++.+.+.+++|+... +.+.+|.|++.+...+-. .+|.. ...-.++
T Consensus 59 ~~------~-----~~~~~l~~~i~~l~~~g-----------------g~t~~~~al~~~~~~~~~~~~g~R~~~~kvvv 110 (184)
T d1atza_ 59 NV------V-----PEKAHLLSLVDVMQREG-----------------GPSQIGDALGFAVRYLTSEMHGARPGASKAVV 110 (184)
T ss_dssp TC------C-----CCHHHHHHHHHTCCCCC-----------------CCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEE
T ss_pred CC------C-----CCHHHHHHHHHHHHHCC-----------------CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 45------6-----63999999987301011-----------------00010246667788763243178889815999
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCCCCCCC-
Q ss_conf 9833899999975435656674469885100015987406999999999883718889441599547120100113551-
Q 006547 274 AFLSGPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITNEYTDLASLKFLSIESG- 352 (641)
Q Consensus 274 ~F~~g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~~~~~i~~l~~l~~~TG- 352 (641)
++++|.++- + . .+.+.++.+.||.|-.+..+ +..+..+|..++..++
T Consensus 111 lltdg~~~d--------~----~-------------------~~~a~~lk~~gi~v~~igiG-~~~~~~~L~~ias~~~~ 158 (184)
T d1atza_ 111 ILVTDVSVD--------S----V-------------------DAAADAARSNRVTVFPIGIG-DRYDAAQLRILAGPAGD 158 (184)
T ss_dssp EEECSCCSS--------C----C-------------------HHHHHHHHHTTEEEEEEEES-SSSCHHHHHHHTGGGGG
T ss_pred EEEECCCCC--------H----H-------------------HHHHHHHHHCCCEEEEEEEC-CCCCHHHHHHHHCCCCC
T ss_conf 998067653--------0----6-------------------68999999759589999958-85999999998578885
Q ss_pred EEEEEECCCC
Q ss_conf 0899957899
Q 006547 353 GSLFLYSSTD 362 (641)
Q Consensus 353 G~i~~y~~~~ 362 (641)
..++..++++
T Consensus 159 ~~~~~~~~~~ 168 (184)
T d1atza_ 159 SNVVKLQRIE 168 (184)
T ss_dssp GGCEEESSTT
T ss_pred CCEEEECCHH
T ss_conf 6389937988
No 14
>d1ijba_ c.62.1.1 (A:) von Willebrand factor A1 domain, vWA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=6.3e-05 Score=44.67 Aligned_cols=175 Identities=13% Similarity=0.116 Sum_probs=104.8
Q ss_pred CEEEEEEECCCC--HHHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEE-ECCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf 579999978889--468999999999999709---999699998616338999-71499661124750799885430001
Q 006547 122 PVYVAAVDLSSS--EEFLELTRSALQAALEAV---PSGALFGLATFSHKIGLY-DVQGAIPVVKNVFIPSDTEDTLSLEL 195 (641)
Q Consensus 122 p~~vFvID~s~~--~~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~-~l~~~~~~~~~v~~~~~~~~~~~~dl 195 (641)
-=.+|+||.|.+ ...++.+++.+...++.+ +.+.+||+++|++..+.. ++
T Consensus 14 ~Dl~fvlD~S~S~~~~~f~~~k~fv~~~i~~l~~~~~~~rvavv~y~~~~~~~~~l------------------------ 69 (202)
T d1ijba_ 14 LDLVFLLDGSSRLSEAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDGSHAYIGL------------------------ 69 (202)
T ss_dssp EEEEEEEECBTTSCHHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSSEEEEECT------------------------
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEECCC------------------------
T ss_conf 03899996979988789999999999999973258887379999974230352277------------------------
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 00265465643557669999999976068986422345556777755687636899999999641003897531169998
Q 006547 196 EDVMPLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGSEYGNTFALARVFAF 275 (641)
Q Consensus 196 ~d~~p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~~g~~~~~~gkIi~F 275 (641)
.+ + . .++.+.+.++.++.... ....+|.||+.+..-+...+......-.++++
T Consensus 70 ~~------~----~-~~~~l~~~i~~l~~~~g----------------~~~~~~~al~~~~~~~~~~~~r~~~~k~vivi 122 (202)
T d1ijba_ 70 KD------R----K-RPSELRRIASQVKYAGS----------------QVASTSEVLKYTLFQIFSKIDRPEASRIALLL 122 (202)
T ss_dssp TC------C----C-CHHHHHHHHHTCCCCCB----------------SCCCHHHHHHHHHHHTSSSCSCTTSEEEEEEE
T ss_pred CC------C----C-HHHHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf 65------2----0-69999999986655520----------------01009999999999765520477775157885
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCCCCCC-CEE
Q ss_conf 3389999997543565667446988510001598740699999999988371888944159954712010011355-108
Q 006547 276 LSGPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITNEYTDLASLKFLSIES-GGS 354 (641)
Q Consensus 276 ~~g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~~~~~i~~l~~l~~~T-GG~ 354 (641)
+.|...- +. ..-..+.+..+.+.||.|-.... ....+..+|..++..+ ++.
T Consensus 123 tdg~~~~-------~~--------------------~~~~~~~~~~l~~~gv~i~~Vgi-g~~~~~~~L~~ia~~~~~~~ 174 (202)
T d1ijba_ 123 MASQEPQ-------RM--------------------SRNFVRYVQGLKKKKVIVIPVGI-GPHANLKQIRLIEKQAPENK 174 (202)
T ss_dssp ECCCCCG-------GG--------------------CTTHHHHHHHHHHTTEEEEEEEE-STTSCHHHHHHHHHHCTTCC
T ss_pred CCCCCCC-------CC--------------------CHHHHHHHHHHHHCCCEEEEEEE-CCCCCHHHHHHHHCCCCCCC
T ss_conf 3468886-------42--------------------16899999999985996899985-78579999999851899676
Q ss_pred EEEECCCCC-CCHHHHHHHHHC
Q ss_conf 999578997-841489999822
Q 006547 355 LFLYSSTDD-STLPQDIYRMLS 375 (641)
Q Consensus 355 i~~y~~~~~-~~l~~dl~~~l~ 375 (641)
++..++++. ..+..+|.+.++
T Consensus 175 ~~~~~~~~~L~~~~~~i~~~iC 196 (202)
T d1ijba_ 175 AFVLSSVDELEQQRDEIVSYLC 196 (202)
T ss_dssp CEEESSGGGHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHHHC
T ss_conf 8995899999999999999873
No 15
>d1mf7a_ c.62.1.1 (A:) Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=2.1e-05 Score=47.57 Aligned_cols=173 Identities=14% Similarity=0.152 Sum_probs=99.4
Q ss_pred CCEEEEEEECCCCH--HHHHHHHHHHHHHHHHCC-CCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHC
Q ss_conf 95799999788894--689999999999997099-996999986163389997149966112475079988543000100
Q 006547 121 RPVYVAAVDLSSSE--EFLELTRSALQAALEAVP-SGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLELED 197 (641)
Q Consensus 121 ~p~~vFvID~s~~~--~~l~~~~~~l~~~l~~l~-~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl~d 197 (641)
+.=.+|+||.|.+. ..++.++..+...++.+. .+++||+|+|++..+.. + .+.+
T Consensus 5 ~~DivfvlD~S~s~~~~~~~~~k~f~~~iv~~l~~~~~rv~vv~fs~~~~~~------------~-----------~l~~ 61 (194)
T d1mf7a_ 5 DSDIAFLIDGSGSIIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFRIH------------F-----------TFKE 61 (194)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCCTTEEEEEEEESSSEEEE------------E-----------CHHH
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEE------------E-----------ECCC
T ss_conf 7169999979899887999999999999999718678369999972240257------------7-----------5266
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCCCCE-EEEE
Q ss_conf 265465643557669999999976068986422345556777755687636899999999641-00389753116-9998
Q 006547 198 VMPLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLG-SEYGNTFALAR-VFAF 275 (641)
Q Consensus 198 ~~p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~-~~g~~~~~~gk-Ii~F 275 (641)
. ..+..+.+.++.++... ..+.+|.||..|...+- ...+..-..-| ++++
T Consensus 62 ~-----------~~~~~~~~~i~~i~~~~-----------------~~t~~~~al~~~~~~~~~~~~~~~~~~~kvvvli 113 (194)
T d1mf7a_ 62 F-----------QNNPNPRSLVKPITQLL-----------------GRTHTATGIRKVVRELFNITNGARKNAFKILVVI 113 (194)
T ss_dssp H-----------HHSCCHHHHHTTCCCCC-----------------SCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEE
T ss_pred C-----------CCHHHHHHHHHHHHHHH-----------------CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 5-----------77899999976455532-----------------1015779999999998756425788973599998
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC-----CCCCHHCCCCCCCC
Q ss_conf 3389999997543565667446988510001598740699999999988371888944159-----95471201001135
Q 006547 276 LSGPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITN-----EYTDLASLKFLSIE 350 (641)
Q Consensus 276 ~~g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~-----~~~~i~~l~~l~~~ 350 (641)
++|.++-++-.+ .+.+.++.+.|| .+|+.+. ...+..+|..++..
T Consensus 114 TDG~~~~~~~~~----------------------------~~~~~~~~~~gv--~i~~VGi~~~~~~~~~~~~L~~ias~ 163 (194)
T d1mf7a_ 114 TDGEKFGDPLGY----------------------------EDVIPEADREGV--IRYVIGVGDAFRSEKSRQELNTIASK 163 (194)
T ss_dssp ESSCCBSCSSCG----------------------------GGTHHHHHHTTE--EEEEEEESGGGCSHHHHHHHHHHSCS
T ss_pred ECCCCCCCCHHH----------------------------HHHHHHHHHCCC--EEEEEECCCCCCCCCCHHHHHHHHCC
T ss_conf 268989980559----------------------------999999998599--05998057766652569999999659
Q ss_pred CC-EEEEEECCCCC-CCHHHHHHHHH
Q ss_conf 51-08999578997-84148999982
Q 006547 351 SG-GSLFLYSSTDD-STLPQDIYRML 374 (641)
Q Consensus 351 TG-G~i~~y~~~~~-~~l~~dl~~~l 374 (641)
.+ ..++..++++. ..+...|.+.+
T Consensus 164 ~~~~~~~~~~~~~~L~~~~~~l~~~i 189 (194)
T d1mf7a_ 164 PPRDHVFQVNNFEALKTIQNQLREKI 189 (194)
T ss_dssp SHHHHEEEESSGGGGGGGHHHHHHHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf 98771999599999999999998876
No 16
>d1pt6a_ c.62.1.1 (A:) Integrin alpha1-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=5.1e-05 Score=45.18 Aligned_cols=171 Identities=13% Similarity=0.103 Sum_probs=98.5
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHCCCC
Q ss_conf 9999978889468999999999999709---9996999986163389997149966112475079988543000100265
Q 006547 124 YVAAVDLSSSEEFLELTRSALQAALEAV---PSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLELEDVMP 200 (641)
Q Consensus 124 ~vFvID~s~~~~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl~d~~p 200 (641)
.+|++|.|.+.+.++.+++.++..++.+ ++++|||+|+|++.++.. .++.+
T Consensus 4 ivfvlD~S~S~~~~~~~k~f~~~~i~~~~i~~~~~rv~vv~fs~~~~~~-----------------------~~l~~--- 57 (192)
T d1pt6a_ 4 IVIVLDGSNSIYPWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHE-----------------------FNLNK--- 57 (192)
T ss_dssp EEEEEECCTTCCCHHHHHHHHHHHHTTSCBSTTSBEEEEEEESSSEEEE-----------------------ECTTT---
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE-----------------------EECCC---
T ss_conf 9999979888777999999999999982548887379999984127899-----------------------72776---
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCCCCE-EEEEECC
Q ss_conf 46564355766999999997606898642234555677775568763689999999964-100389753116-9998338
Q 006547 201 LSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYL-GSEYGNTFALAR-VFAFLSG 278 (641)
Q Consensus 201 ~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll-~~~g~~~~~~gk-Ii~F~~g 278 (641)
+ . .+..+...++++.... . ....+|.||..|...+ ....|.....-| +++++.|
T Consensus 58 ---~----~-~~~~~~~~i~~~~~~~-g---------------~~~~~~~al~~~~~~~~~~~~g~R~~~~kviillTDG 113 (192)
T d1pt6a_ 58 ---Y----S-STEEVLVAAKKIVQRG-G---------------RQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDG 113 (192)
T ss_dssp ---C----S-SHHHHHHHHHTCCCCC-C---------------SSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESS
T ss_pred ---C----H-HHHHHHHHHHHHHHHH-H---------------HCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
T ss_conf ---4----0-4689999886555442-2---------------1101578987777763012358988861589999668
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC--------CCCHHCCCCCCCC
Q ss_conf 99999975435656674469885100015987406999999999883718889441599--------5471201001135
Q 006547 279 PPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITNE--------YTDLASLKFLSIE 350 (641)
Q Consensus 279 ~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~~--------~~~i~~l~~l~~~ 350 (641)
.++- .....+.+..+.+.||.+-.+..+.. .....+|..++..
T Consensus 114 ~~~d-----------------------------~~~~~~~a~~lk~~gi~v~~igvg~~~~~~~~~~~~~~~~L~~IAs~ 164 (192)
T d1pt6a_ 114 ESHD-----------------------------NHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIKSIASE 164 (192)
T ss_dssp CCSC-----------------------------SHHHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCS
T ss_pred CCCC-----------------------------CHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 8776-----------------------------30269999999977996999997055554543431369999998669
Q ss_pred -CCEEEEEECCCCC-CCHHHHHHHH
Q ss_conf -5108999578997-8414899998
Q 006547 351 -SGGSLFLYSSTDD-STLPQDIYRM 373 (641)
Q Consensus 351 -TGG~i~~y~~~~~-~~l~~dl~~~ 373 (641)
++..++..++|.. ..+.+.|.+.
T Consensus 165 p~~~~~f~v~d~~~L~~i~~~i~~~ 189 (192)
T d1pt6a_ 165 PTEKHFFNVSDELALVTIVKTLGER 189 (192)
T ss_dssp SHHHHEEEESSGGGGGGGHHHHHHH
T ss_pred CCCCCEEECCCHHHHHHHHHHHHHH
T ss_conf 9855089838999999999999888
No 17
>d1jeya2 c.62.1.3 (A:34-253) Ku70 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=6.4e-05 Score=44.60 Aligned_cols=195 Identities=11% Similarity=0.096 Sum_probs=96.0
Q ss_pred EEEEEEECCCCH---------HHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCC
Q ss_conf 799999788894---------68999999999999709---999699998616338999714996611247507998854
Q 006547 123 VYVAAVDLSSSE---------EFLELTRSALQAALEAV---PSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDT 190 (641)
Q Consensus 123 ~~vFvID~s~~~---------~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~ 190 (641)
..||+||+|.++ ..++..++++...+..+ .++.+||+|+|++...-........ .
T Consensus 4 aivf~ID~S~SM~~~d~~~~~s~~~~~~~~~~~~~~~~i~~~~~d~vglv~f~t~~~~~~~~~~~~---~---------- 70 (220)
T d1jeya2 4 SLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNI---Y---------- 70 (220)
T ss_dssp EEEEEEECSGGGGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCCTTE---E----------
T ss_pred EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCH---H----------
T ss_conf 799999898030745567887789999999999999985079987799999546666687765303---5----------
Q ss_pred CCHHHHCCCCCCCCCCCHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 30001002654656435576-69999999976068986422345556777755687636899999999641003897531
Q 006547 191 LSLELEDVMPLSQFLAPVET-FKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGSEYGNTFAL 269 (641)
Q Consensus 191 ~~~dl~d~~p~~~~l~~~~e-~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~~g~~~~~~ 269 (641)
+...++.+ ....+..+.+ .+......+..+... .++..++.||..|..++....... ..
T Consensus 71 ~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~t~l~~al~~a~~~~~~~~~~~-~~ 130 (220)
T d1jeya2 71 VLQELDNP--GAKRILELDQFKGQQGQKRFQDMMGH-----------------GSDYSLSEVLWVCANLFSDVQFKM-SH 130 (220)
T ss_dssp EEEEEECC--CHHHHHHHHTTSHHHHHHHHHHHHCC-----------------SCCCCHHHHHHHHHHHHHTCSSCE-EE
T ss_pred HHHCCCCC--HHHHHHHHHHHHHHHHHHHHHHCCCC-----------------CCCCCHHHHHHHHHHHHHHCCCCC-CC
T ss_conf 53013474--28898766553234444443202467-----------------888629999999999987401345-77
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC-CCCHHCC-CCC
Q ss_conf 16999833899999975435656674469885100015987406999999999883718889441599-5471201-001
Q 006547 270 ARVFAFLSGPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITNE-YTDLASL-KFL 347 (641)
Q Consensus 270 gkIi~F~~g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~~-~~~i~~l-~~l 347 (641)
-+|++||.|..+.|...-.. .--.+.+.++...+|.+..|..+.. .++.... ..+
T Consensus 131 k~IiliTDg~~~~~~~~~~~-----------------------~~~~~~a~~~~~~gv~i~~i~ig~~~~~d~~~f~~~~ 187 (220)
T d1jeya2 131 KRIMLFTNEDNPHGNDSAKA-----------------------SRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDI 187 (220)
T ss_dssp EEEEEEESCSCTTTTCHHHH-----------------------HHHHHHHHHHHHHTEEEEEEEBCCTTCCCTTTTGGGT
T ss_pred CEEEEEECCCCCCCCCCHHH-----------------------HHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHH
T ss_conf 58999805998888851245-----------------------7799998877630651799983787875511668998
Q ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 135510899957899784148999982
Q 006547 348 SIESGGSLFLYSSTDDSTLPQDIYRML 374 (641)
Q Consensus 348 ~~~TGG~i~~y~~~~~~~l~~dl~~~l 374 (641)
....++....+.--+...|. +|.+-+
T Consensus 188 l~~~~~~~~~~~~~~~~~l~-~l~~~i 213 (220)
T d1jeya2 188 ISIAEDEDLRVHFEESSKLE-DLLRKV 213 (220)
T ss_dssp CC--------CCCCCBCSHH-HHHHHH
T ss_pred HHHCCCCCCCCCCCCHHHHH-HHHHHH
T ss_conf 72113666761068646699-999999
No 18
>d1pd0a2 b.2.8.1 (A:133-215,A:553-646) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.27 E-value=7.4e-08 Score=62.22 Aligned_cols=49 Identities=20% Similarity=0.377 Sum_probs=39.0
Q ss_pred CEECCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01033586799978888339972659855887898999993467999988787877
Q 006547 2 AVRATVSRFPSDPDAQEASGLPWGVTVTPFATKDENGAAPVYGSDGHMLPRCENCY 57 (641)
Q Consensus 2 ~iR~T~~~~P~~~~~~~~~~lPlg~~v~Pf~~~~~~~~~~~~~~~~~~p~RC~~C~ 57 (641)
+||+|+|++|.+.+++++++||||++++||+......+ .+. =+||++.-
T Consensus 49 ~~r~T~~~iP~~~~ll~~~~lP~~~~i~Pf~~l~~a~~-~vm------RvR~S~Gl 97 (177)
T d1pd0a2 49 YIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDCME-TVM------RARGSTGL 97 (177)
T ss_dssp TEEESBSSEESSHHHHHHHCCCCEEEECSCCSSSTEEE-EEE------EEEECTTE
T ss_pred CEEEEECCCCCCHHHHHHCCCCCEEEECCCCCHHHHHH-EEE------EEECCCCE
T ss_conf 12445014788799998759983798514621333101-468------87638984
No 19
>d2qtva4 d.109.2.1 (A:627-768) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.20 E-value=4.2e-07 Score=57.75 Aligned_cols=46 Identities=30% Similarity=0.484 Sum_probs=39.8
Q ss_pred CCEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 42286016999988855662232304799489982794999998499999
Q 006547 572 PLLTSYSTPDKQAFPRHSLSRAALITSGSPIFLLDAFTTIIVFYSSTADP 621 (641)
Q Consensus 572 P~L~~~~~~~~~~~~~~~L~~~~~~~~~~~iyLlD~~~~i~i~~G~~~~~ 621 (641)
|.|++|+..++ |.|+|+++.+ +.+|.|+|||+||+|+||+|..+..
T Consensus 1 PtL~sy~~~~~---p~pVlLDs~S-i~~D~ILLLDtfF~V~I~~G~~Ia~ 46 (142)
T d2qtva4 1 PTLTSFSMEDD---PQPVLLDSIS-VKPNTILLLDTFFFILIYHGEQIAQ 46 (142)
T ss_dssp CEEEEECSSSC---CEECCSBGGG-CCTTCEEEEECSSEEEEEECHHHHH
T ss_pred CCEEEECCCCC---CCEEECCHHH-CCCCEEEEECCCCEEEEEECCHHHH
T ss_conf 92699647998---8456553553-4888699974788899996708999
No 20
>d1jeyb2 c.62.1.4 (B:6-241) Ku80 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.14 E-value=6.4e-05 Score=44.60 Aligned_cols=148 Identities=9% Similarity=0.053 Sum_probs=84.2
Q ss_pred CEEEEEEECCCCH--------HHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCC
Q ss_conf 5799999788894--------68999999999999709---999699998616338999714996611247507998854
Q 006547 122 PVYVAAVDLSSSE--------EFLELTRSALQAALEAV---PSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDT 190 (641)
Q Consensus 122 p~~vFvID~s~~~--------~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~ 190 (641)
.+.||+||+|.++ ..++.+++++...++.+ .++.+||||+|++..+-....... .
T Consensus 3 ~aiv~~lD~S~SM~~~~~~~~srl~~ak~~~~~~v~~~~~~~~~d~vglV~f~~~~t~~~~~~~~-----------~--- 68 (236)
T d1jeyb2 3 AAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGD-----------Q--- 68 (236)
T ss_dssp EEEEEEEECCGGGGCCBTTBCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCTTT-----------C---
T ss_pred CEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC-----------C---
T ss_conf 41999998984436577899998999999999999998428999759999973777656656556-----------6---
Q ss_pred CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCCC
Q ss_conf 3000100265465643557669999999976068986422345556777755687636899999999641003-897531
Q 006547 191 LSLELEDVMPLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGSEY-GNTFAL 269 (641)
Q Consensus 191 ~~~dl~d~~p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~~g-~~~~~~ 269 (641)
...+. ++.++......+...+..+.... .....++.||..|...+.... +.....
T Consensus 69 -~~~i~-------~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~al~~a~~~~~~~~~~~~~~~ 124 (236)
T d1jeyb2 69 -YQNIT-------VHRHLMLPDFDLLEDIESKIQPG----------------SQQADFLDALIVSMDVIQHETIGKKFEK 124 (236)
T ss_dssp -STTEE-------EEEEEECCCHHHHHHHHTTCCCC----------------SSCCCHHHHHHHHHHHHHHHSSSSCCSE
T ss_pred -CCEEE-------EEECCCCCHHHHHHHHHHHCCCC----------------CCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf -30479-------97413220156777776530246----------------5555504788999988777640466565
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 169998338999999754356566744698851000159874069999999998837188894415
Q 006547 270 ARVFAFLSGPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAIT 335 (641)
Q Consensus 270 gkIi~F~~g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~ 335 (641)
-+|++|+.|..+.+. .-...++..+.+.+|.++++...
T Consensus 125 r~IiL~TDG~~~~~~----------------------------~~~~~~a~~l~~~~I~i~~ig~g 162 (236)
T d1jeyb2 125 RHIEIFTDLSSRFSK----------------------------SQLDIIIHSLKKCDISLQFFLPF 162 (236)
T ss_dssp EEEEEECCCCSCCCC----------------------------TTHHHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEEECCCCCCCH----------------------------HHHHHHHHHHHHCCCEEEEEECC
T ss_conf 179999369987683----------------------------78999999998759889999447
No 21
>d1v7pc_ c.62.1.1 (C:) Integrin alpha2-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.13 E-value=4.5e-05 Score=45.53 Aligned_cols=160 Identities=14% Similarity=0.123 Sum_probs=92.8
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHCCCC
Q ss_conf 9999978889468999999999999709---9996999986163389997149966112475079988543000100265
Q 006547 124 YVAAVDLSSSEEFLELTRSALQAALEAV---PSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLELEDVMP 200 (641)
Q Consensus 124 ~vFvID~s~~~~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl~d~~p 200 (641)
.+|++|.|.+.+.++.+|+.++..++.+ ++++|||+++|++.+... .++.+
T Consensus 4 ivfvlD~S~Sv~~f~~~k~f~~~ii~~~~i~~~~~rv~vv~fs~~~~~~-----------------------~~l~~--- 57 (193)
T d1v7pc_ 4 VVVVCDESNSIYPWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNPRVV-----------------------FNLNT--- 57 (193)
T ss_dssp EEEEEECCTTCCCHHHHHHHHHHHHHTSCBSTTSEEEEEEEESSSEEEE-----------------------ECTTT---
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEE-----------------------ECCCC---
T ss_conf 9999989998736999999999999972558876079999852011355-----------------------04663---
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCCCC-EEEEEECC
Q ss_conf 4656435576699999999760689864223455567777556876368999999996410-038975311-69998338
Q 006547 201 LSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGS-EYGNTFALA-RVFAFLSG 278 (641)
Q Consensus 201 ~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~-~g~~~~~~g-kIi~F~~g 278 (641)
+ . .++.+...++.+.... . ..+.+|.||+.|...+-. ..+.....- -++++++|
T Consensus 58 ---~----~-~~~~~~~~i~~~~~~~-g---------------~~t~~~~AL~~a~~~~f~~~~~~R~~~~kvvVllTDG 113 (193)
T d1v7pc_ 58 ---Y----K-TKEEMIVATSQTSQYG-G---------------DLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDG 113 (193)
T ss_dssp ---C----S-SHHHHHHHHHHCCCCC-C---------------SCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESS
T ss_pred ---H----H-HHHHHHHHHHHHHHHC-C---------------CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
T ss_conf ---0----3-6789999987444322-5---------------7642688998888741461238988873589999568
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC--------CCCCHHCCCCCCCC
Q ss_conf 9999997543565667446988510001598740699999999988371888944159--------95471201001135
Q 006547 279 PPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITN--------EYTDLASLKFLSIE 350 (641)
Q Consensus 279 ~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~--------~~~~i~~l~~l~~~ 350 (641)
.++-+. .....+.++...+|.+-....+. ......+|..++..
T Consensus 114 ~s~d~~-----------------------------~~~~~~~~~~~~gv~v~~Igvg~~~~~~~~~~~~~~~~L~~Ias~ 164 (193)
T d1v7pc_ 114 ESHDGS-----------------------------MLKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASI 164 (193)
T ss_dssp CCSCGG-----------------------------GHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCS
T ss_pred CCCCCC-----------------------------CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 767873-----------------------------689999999868989999996775444444441259999998669
Q ss_pred CCEE-EEEECCCC
Q ss_conf 5108-99957899
Q 006547 351 SGGS-LFLYSSTD 362 (641)
Q Consensus 351 TGG~-i~~y~~~~ 362 (641)
+++. ++...+|.
T Consensus 165 p~~~~~f~v~d~~ 177 (193)
T d1v7pc_ 165 PTERYFFNVSDEA 177 (193)
T ss_dssp SHHHHEEEESSSG
T ss_pred CCCCEEEECCCHH
T ss_conf 8710189818999
No 22
>d2qtva2 b.2.8.1 (A:2-44,A:391-523) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.10 E-value=8.9e-07 Score=55.75 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=32.8
Q ss_pred CEECCCCCCCCCHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 01033586799978888339972659855887898
Q 006547 2 AVRATVSRFPSDPDAQEASGLPWGVTVTPFATKDE 36 (641)
Q Consensus 2 ~iR~T~~~~P~~~~~~~~~~lPlg~~v~Pf~~~~~ 36 (641)
|+|++||+||.++..+.++.+|+||+|+|+++...
T Consensus 10 gvR~swn~~p~s~~e~~~~vvP~~~~ytplker~d 44 (176)
T d2qtva2 10 GVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDD 44 (176)
T ss_dssp SEEESBSEEESSHHHHHHTCSCEEEEECTTCCCTC
T ss_pred CCEEEEECCCCCHHHHHCEEEEEEEEECCCCCCCC
T ss_conf 73777512689767751505216688625733668
No 23
>d1mjna_ c.62.1.1 (A:) Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.09 E-value=0.00011 Score=43.22 Aligned_cols=164 Identities=10% Similarity=0.092 Sum_probs=92.4
Q ss_pred EEEEEEECCCCH--HHHHHHHHHHHHHHHHCC-CCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHCCC
Q ss_conf 799999788894--689999999999997099-99699998616338999714996611247507998854300010026
Q 006547 123 VYVAAVDLSSSE--EFLELTRSALQAALEAVP-SGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLELEDVM 199 (641)
Q Consensus 123 ~~vFvID~s~~~--~~l~~~~~~l~~~l~~l~-~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl~d~~ 199 (641)
=.+|+||.|.+. ..++.+++.+...++.+. .++|||+|+|++.++.. .++.+
T Consensus 4 DivfllD~S~Si~~~~f~~~k~f~~~~i~~i~~~~~rvgvv~fs~~~~~~-----------------------~~l~~-- 58 (179)
T d1mjna_ 4 DLVFLFDGSMSLQPDEFQKILDFMKDVMKKCSNTSYQFAAVQFSTSYKTE-----------------------FDFSD-- 58 (179)
T ss_dssp EEEEEEECBTTCCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSSEEEE-----------------------ECHHH--
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEE-----------------------ECHHH--
T ss_conf 89999979899898999999999999999828775289999974234688-----------------------51143--
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHCCCCCCCCCCCE-EEEEEC
Q ss_conf 5465643557669999999976068986422345556777755687636899999999-64100389753116-999833
Q 006547 200 PLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFN-YLGSEYGNTFALAR-VFAFLS 277 (641)
Q Consensus 200 p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~-ll~~~g~~~~~~gk-Ii~F~~ 277 (641)
...++.+.+.++.++... +.+.+|.||+.|.. +.....|.....-| +++++.
T Consensus 59 ---------~~~~~~~~~~i~~i~~~~-----------------g~t~~~~AL~~~~~~~f~~~~g~R~~~~kvvvllTD 112 (179)
T d1mjna_ 59 ---------YVKRKDPDALLKHVKHML-----------------LLTNTFGAINYVATEVFREELGARPDATKVLIIITD 112 (179)
T ss_dssp ---------HHHHCCHHHHHTTCCCCC-----------------BCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEES
T ss_pred ---------CCCHHHHHHHHHHHHCCC-----------------CCCHHHHHHHHHHHHHHCHHCCCCCCCCEEEEEEEC
T ss_conf ---------063688999986331015-----------------863499999999998716101889999749999978
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCCHHCCCCCCCCC-CE
Q ss_conf 899999975435656674469885100015987406999999999883718889441599---54712010011355-10
Q 006547 278 GPPDHGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAITNE---YTDLASLKFLSIES-GG 353 (641)
Q Consensus 278 g~pt~GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvDif~~~~~---~~~i~~l~~l~~~T-GG 353 (641)
|.++-... . + ...++.+..+..+.. ..+..+|..++... +.
T Consensus 113 G~s~d~~~---------~--------------~------------~~~~i~~~~igvg~~~~~~~~~~~L~~ias~p~~~ 157 (179)
T d1mjna_ 113 GEATDSGN---------I--------------D------------AAKDIIRYIIGIGKHFQTKESQETLHKFASKPASE 157 (179)
T ss_dssp SCCSSCSC---------C--------------G------------GGTTSEEEEEEESGGGCSHHHHHTTGGGSCSCHHH
T ss_pred CCCCCCCH---------H--------------H------------HHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 99865406---------9--------------9------------97417440698524456400499999985799622
Q ss_pred EEEEECCCCC-CCHHHHHHH
Q ss_conf 8999578997-841489999
Q 006547 354 SLFLYSSTDD-STLPQDIYR 372 (641)
Q Consensus 354 ~i~~y~~~~~-~~l~~dl~~ 372 (641)
.++..++|+. ..+.++|.+
T Consensus 158 ~~~~~~~~~~L~~i~~~l~~ 177 (179)
T d1mjna_ 158 FVKILDTFEKLKDLCTELQK 177 (179)
T ss_dssp HEEEESSGGGSCCHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHH
T ss_conf 39974999999999999984
No 24
>d1tyeb2 c.62.1.1 (B:107-354) Integrin beta A domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.70 E-value=0.00093 Score=37.62 Aligned_cols=217 Identities=13% Similarity=0.061 Sum_probs=99.8
Q ss_pred CCEEEEEEECCCCH-HHHHHHHHHHHHHHHHC---CCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHH
Q ss_conf 95799999788894-68999999999999709---999699998616338999714996611247507998854300010
Q 006547 121 RPVYVAAVDLSSSE-EFLELTRSALQAALEAV---PSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSLELE 196 (641)
Q Consensus 121 ~p~~vFvID~s~~~-~~l~~~~~~l~~~l~~l---~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~dl~ 196 (641)
|-=.+|++|+|.++ ..++.+++.+...++.+ ..+.|+||++|.+...-....... . +.......+..
T Consensus 5 PvDl~Fv~D~TgSM~~~i~~vk~~i~~i~~~l~~~~~~~r~g~~~f~D~~~~p~~~~~~--~-------~~~~~p~~~~~ 75 (248)
T d1tyeb2 5 PVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISP--P-------EALENPCYDMK 75 (248)
T ss_dssp CEEEEEEEECSGGGGGGHHHHHHHHHHHHHHHHHHCSCEEEEEEEECCCSSTTTSCCCS--G-------GGGTCGGGGGT
T ss_pred CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC--H-------HHCCCCCCCCC
T ss_conf 80489999787087999999999999999999842857549889877355676422360--5-------43168653446
Q ss_pred CC-CC-CC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH--HHHCCCCCCCCCCCE
Q ss_conf 02-65-46-564355766999999997606898642234555677775568763689999999--964100389753116
Q 006547 197 DV-MP-LS-QFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLF--NYLGSEYGNTFALAR 271 (641)
Q Consensus 197 d~-~p-~~-~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~--~ll~~~g~~~~~~gk 271 (641)
.. .+ +. .-..++....+.+.+.|+++...... |. +...+.+-.+++. .-++ .... .-|
T Consensus 76 ~~~~~~f~~~~~~~~t~d~~~f~~~l~~~~~~Ggg-------D~------pE~~~~Al~~a~~~~~~i~-Wr~~---a~r 138 (248)
T d1tyeb2 76 TTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNR-------DA------PEGGFDAIMQATVCDEKIG-WRND---ASH 138 (248)
T ss_dssp SCCCCCCSEEEEEEEESCHHHHHHHHTTCCCCCCS-------SS------SBCHHHHHHHHHHCHHHHT-CCTT---SEE
T ss_pred CCCCCCCCCEECCCCCCCHHHHHHHHHHEECCCCC-------CC------CCHHHHHHHHHHHHHHHCC-CCCC---CCE
T ss_conf 55456644310377777999999998501131688-------97------5038999999998763079-8888---608
Q ss_pred E-EEEECCCCCC-CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHH---HHHHHHHHHHCCCEEEEEEECCCCCCHHCCCC
Q ss_conf 9-9983389999-99754356566744698851000159874069---99999999883718889441599547120100
Q 006547 272 V-FAFLSGPPDH-GAGQLDTRRYGEQYASKGEDADRALLPEQTPF---YKDLAAVAVQAGVCVDIFAITNEYTDLASLKF 346 (641)
Q Consensus 272 I-i~F~~g~pt~-GpG~i~~~~~~~~~~~~~~~~e~~~~~~~~~f---Y~~la~~~~~~~isvDif~~~~~~~~i~~l~~ 346 (641)
+ ++++..+|-. |.|++......+....+.. ....+....... -.++.+.+.+.+|.+ +|+.+....+ ....
T Consensus 139 ~viliTDA~~H~~~d~~l~g~~~~~d~~~~~~-~~~~~~~~~~~dyps~~ql~~~l~~~~i~~-ifavt~~~~~--~Y~~ 214 (248)
T d1tyeb2 139 LLVFTTDAKTHIALDGRLAGIVQPNDGQCHVG-SDNHYSASTTMDYPSLGLMTEKLSQKNINL-IFAVTENVVN--LYQN 214 (248)
T ss_dssp EEEEEESSCBCCTTGGGGGTCCSCCCCCCCBC-TTSBBGGGGTSCCCCHHHHHHHHHHTTEEE-EEEECGGGHH--HHHH
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHCCEE-EEEECCHHHH--HHHH
T ss_conf 99998878755453123323345677755467-778535654345788899999999829579-9998831568--9999
Q ss_pred CCCCCCEEEEEECCCCCCCHH
Q ss_conf 113551089995789978414
Q 006547 347 LSIESGGSLFLYSSTDDSTLP 367 (641)
Q Consensus 347 l~~~TGG~i~~y~~~~~~~l~ 367 (641)
|+..++|...---+.+...+.
T Consensus 215 l~~~~~g~~~~~l~~dssNi~ 235 (248)
T d1tyeb2 215 YSELIPGTTVGVLSMDSSNVL 235 (248)
T ss_dssp HHHTSTTCEEEECSSCCHHHH
T ss_pred HHHHCCCCEEEEECCCCHHHH
T ss_conf 998569857987055344499
No 25
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.83 E-value=0.00064 Score=38.62 Aligned_cols=52 Identities=15% Similarity=0.134 Sum_probs=35.6
Q ss_pred HHCCCEEEECCCCCCC-CC-CCCCCHHHHCCCCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 1144228601699998-88-55662232304799489982794999998499999
Q 006547 569 AVYPLLTSYSTPDKQA-FP-RHSLSRAALITSGSPIFLLDAFTTIIVFYSSTADP 621 (641)
Q Consensus 569 ~iyP~L~~~~~~~~~~-~~-~~~L~~~~~~~~~~~iyLlD~~~~i~i~~G~~~~~ 621 (641)
..-||||.+++....- +. .+......+ +.++.+||||+|..||||+|+.++.
T Consensus 9 ~~~prLf~~~~~~g~~~~~ev~~~~~q~d-L~s~dvfILD~g~~ifvW~G~~a~~ 62 (113)
T d2fh1a3 9 AHPPRLFACSNKIGRFVIEEVPGELMQED-LATDDVMLLDTWDQVFVWVGKDSQE 62 (113)
T ss_dssp -CCCEEEEEECTTSSCEEEEECSSCCGGG-SCTTSEEEEECSSCEEEEECTTCCH
T ss_pred CCCCEEEEEECCCCCEEEEEECCCCCHHH-CCCCCEEEEECCCEEEEEECCCCCH
T ss_conf 78987999986999899999725778878-7977669997899789996898997
No 26
>d1yvra2 c.62.1.5 (A:364-537) 60-kda SS-A/Ro ribonucleoprotein, RoRNP {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=96.56 E-value=0.0022 Score=35.43 Aligned_cols=105 Identities=13% Similarity=0.108 Sum_probs=59.1
Q ss_pred CCCEEEEEEECCCCHH------HHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCH
Q ss_conf 9957999997888946------8999999999999709999699998616338999714996611247507998854300
Q 006547 120 ARPVYVAAVDLSSSEE------FLELTRSALQAALEAVPSGALFGLATFSHKIGLYDVQGAIPVVKNVFIPSDTEDTLSL 193 (641)
Q Consensus 120 ~~p~~vFvID~s~~~~------~l~~~~~~l~~~l~~l~~~~~vglItf~~~V~~~~l~~~~~~~~~v~~~~~~~~~~~~ 193 (641)
..-.++|+||+|.+.+ .+..++.+....+..+.++.++++++|++.+..+.+
T Consensus 4 ~g~~~vl~iD~SGSM~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vv~F~~~~~~~~~---------------------- 61 (174)
T d1yvra2 4 TGKRFLLAIDVSASMNQRVLGSILNASVVAAAMCMLVARTEKDSHMVAFSDEMLPCPI---------------------- 61 (174)
T ss_dssp CCCCEEEEEECSGGGGSBSTTSSCBHHHHHHHHHHHHHHHCSSEEEEEESSSEECCSC----------------------
T ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC----------------------
T ss_conf 8976999998860458966386499999999999885056884899996677401546----------------------
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE
Q ss_conf 01002654656435576699999999760689864223455567777556876368999999996410038975311699
Q 006547 194 ELEDVMPLSQFLAPVETFKENITSALETLRPTTSWERTAGAAQGLDGVLMGGRGFGLAMESLFNYLGSEYGNTFALARVF 273 (641)
Q Consensus 194 dl~d~~p~~~~l~~~~e~~~~i~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~Al~~a~~ll~~~g~~~~~~gkIi 273 (641)
.- . +.+.++++.+.... + .++.++.|++.|...... ...|+
T Consensus 62 ~~-------------~---~~~~~~~~~~~~~~-~---------------ggT~i~~al~~a~~~~~~-------~~~iv 102 (174)
T d1yvra2 62 TV-------------N---MLLHEVVEKMSDIT-M---------------GSTDCALPMLWAQKTNTA-------ADIFI 102 (174)
T ss_dssp CT-------------T---SCHHHHHHHHTTCC-C---------------SCCCTTHHHHHHHHTTCC-------CSEEE
T ss_pred CC-------------C---CHHHHHHHHHHCCC-C---------------CCCCHHHHHHHHHHHHCC-------CCEEE
T ss_conf 73-------------1---12999999763256-6---------------663088999999863015-------78799
Q ss_pred EEECCCCCCCCC
Q ss_conf 983389999997
Q 006547 274 AFLSGPPDHGAG 285 (641)
Q Consensus 274 ~F~~g~pt~GpG 285 (641)
+++.|..+.|..
T Consensus 103 llTDg~~~~g~~ 114 (174)
T d1yvra2 103 VFTDCETNVEDV 114 (174)
T ss_dssp EEECCCCCSSSC
T ss_pred EEECCCCCCCCC
T ss_conf 996787567887
No 27
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.50 E-value=0.0018 Score=35.84 Aligned_cols=50 Identities=26% Similarity=0.220 Sum_probs=34.9
Q ss_pred HCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 1442286016999988855662232304799489982794999998499999
Q 006547 570 VYPLLTSYSTPDKQAFPRHSLSRAALITSGSPIFLLDAFTTIIVFYSSTADP 621 (641)
Q Consensus 570 iyP~L~~~~~~~~~~~~~~~L~~~~~~~~~~~iyLlD~~~~i~i~~G~~~~~ 621 (641)
+.||||.++...... ...+.....+ +.++.+||||++..||+|+|+.+++
T Consensus 2 ~~pRL~~v~G~~~~~-~~ev~~~~~~-L~s~dvfILd~~~~iyvW~G~~s~~ 51 (102)
T d1svya_ 2 YKPRLLHISGDKNAK-VAEVPLATSS-LNSGDCFLLDAGLTIYQFNGSKSSP 51 (102)
T ss_dssp CSCEEEEEECTTSCE-EEEECSSGGG-CBTTSEEEEECSSEEEEEECTTCCH
T ss_pred CCCEEEEEECCCCEE-EEEECCCHHH-CCCCCEEEEECCCEEEEEECCCCCH
T ss_conf 986799998998459-9995599899-3999869997499789998998899
No 28
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.18 E-value=0.0024 Score=35.13 Aligned_cols=50 Identities=14% Similarity=0.126 Sum_probs=35.0
Q ss_pred CCCEEEECCCCCCCCC-CCCCCHHHHCCCCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 4422860169999888-55662232304799489982794999998499999
Q 006547 571 YPLLTSYSTPDKQAFP-RHSLSRAALITSGSPIFLLDAFTTIIVFYSSTADP 621 (641)
Q Consensus 571 yP~L~~~~~~~~~~~~-~~~L~~~~~~~~~~~iyLlD~~~~i~i~~G~~~~~ 621 (641)
-||||.++........ ..+.+...+ ++++.+|+||++..||||+|+.+++
T Consensus 3 ~~RLf~v~g~~~~~~~~~EV~~~~ss-Lns~d~fILd~~~~iyvW~G~~s~~ 53 (96)
T d2fh1a2 3 STRLFQVRANSAGATRAVEVLPKAGA-LNSNDAFVLKTPSAAYLWVGTGASE 53 (96)
T ss_dssp SSEEEEEEECTTCCEEEEEECCSGGG-CBTTSEEEEECSSCEEEEECTTCCH
T ss_pred CCEEEEEECCCCCEEEEEEECCCHHH-HCCCCEEEEECCCEEEEEECCCCCH
T ss_conf 74899998778870899995788788-0778748998799799998999999
No 29
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.92 E-value=0.0045 Score=33.52 Aligned_cols=49 Identities=10% Similarity=0.017 Sum_probs=34.4
Q ss_pred CCCEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 442286016999988855662232304799489982794999998499999
Q 006547 571 YPLLTSYSTPDKQAFPRHSLSRAALITSGSPIFLLDAFTTIIVFYSSTADP 621 (641)
Q Consensus 571 yP~L~~~~~~~~~~~~~~~L~~~~~~~~~~~iyLlD~~~~i~i~~G~~~~~ 621 (641)
-+|||.+........ ..+.+...+ +.++.+||||++..||+|+|+.+++
T Consensus 11 ~~rL~~v~G~~~~~~-~eV~~~~~s-L~s~dvfILd~~~~iyvW~G~~ss~ 59 (116)
T d1j72a2 11 VQRLYQVKGKKNIRA-TERALNWDS-FNTGDCFILDLGQNIFAWCGGKSNI 59 (116)
T ss_dssp EEEEEEEECSSSCEE-EEECSSGGG-CBTTSEEEEEETTEEEEEECTTCCH
T ss_pred CCEEEEEECCCCEEE-EEECCCHHH-CCCCCEEEEECCCEEEEEECCCCCH
T ss_conf 867999989871699-994887899-3999889998899789997898999
No 30
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81 E-value=0.016 Score=30.26 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=33.0
Q ss_pred CCCEEEECCCCCC-CC---CCC-CCCHHHHCCCCCCEEEEECC--CEEEEEECCCCCC
Q ss_conf 4422860169999-88---855-66223230479948998279--4999998499999
Q 006547 571 YPLLTSYSTPDKQ-AF---PRH-SLSRAALITSGSPIFLLDAF--TTIIVFYSSTADP 621 (641)
Q Consensus 571 yP~L~~~~~~~~~-~~---~~~-~L~~~~~~~~~~~iyLlD~~--~~i~i~~G~~~~~ 621 (641)
-|+||.+++..+. .+ ... ++. .+.+.++.+||||++ ..||+|+|+.+++
T Consensus 7 ~~~Ly~vs~~~G~~~~~~v~~~~p~~--~~~L~s~dvfILD~~~~~~iyvW~G~~s~~ 62 (107)
T d1j72a3 7 AAALYKVSDATGQMNLTKVADSSPFA--LELLISDDCFVLDNGLCGKIYIWKGRKANE 62 (107)
T ss_dssp CCEEEEEECTTSSCEEEEEECSSSBC--GGGCCTTSEEEEECGGGSEEEEEECTTCCH
T ss_pred CCEEEEEECCCCCEEEEEEECCCCCC--HHHCCCCCEEEEECCCCCEEEEEECCCCCH
T ss_conf 88789998899989999984178668--889799888999326788899987888998
No 31
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.65 E-value=0.013 Score=30.74 Aligned_cols=48 Identities=13% Similarity=0.002 Sum_probs=31.7
Q ss_pred CCEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 42286016999988855662232304799489982794999998499999
Q 006547 572 PLLTSYSTPDKQAFPRHSLSRAALITSGSPIFLLDAFTTIIVFYSSTADP 621 (641)
Q Consensus 572 P~L~~~~~~~~~~~~~~~L~~~~~~~~~~~iyLlD~~~~i~i~~G~~~~~ 621 (641)
-|||.+........ ..+.....+ +.++.+|+||++..||+|+|+.+++
T Consensus 3 ~RLy~v~G~~~i~~-~eV~~~~~~-L~s~dvfILd~~~~iyvW~G~~s~~ 50 (104)
T d1kcqa_ 3 QRLFQVKGRRVVRA-TEVPVSWES-FNNGDCFILDLGNNIHQWCGSNSNR 50 (104)
T ss_dssp CEEEEEEESSSEEE-EEECSSGGG-CCTTSEEEEECSSEEEEEECTTCCH
T ss_pred EEEEEEECCCCEEE-EEECCCHHH-CCCCCEEEEECCCEEEEEECCCCCH
T ss_conf 27999989980799-995898899-4999869998299689997996899
No 32
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]}
Probab=94.55 E-value=0.013 Score=30.78 Aligned_cols=49 Identities=16% Similarity=0.181 Sum_probs=32.9
Q ss_pred CCCEEEECCCCCC-C---CCCC-CCCHHHHCCCCCCEEEEECCC--EEEEEECCCCCC
Q ss_conf 4422860169999-8---8855-662232304799489982794--999998499999
Q 006547 571 YPLLTSYSTPDKQ-A---FPRH-SLSRAALITSGSPIFLLDAFT--TIIVFYSSTADP 621 (641)
Q Consensus 571 yP~L~~~~~~~~~-~---~~~~-~L~~~~~~~~~~~iyLlD~~~--~i~i~~G~~~~~ 621 (641)
.++||.+++.... . .+.. ++.. .+ +.++.+||||++. .||+|+|+.+++
T Consensus 8 ~~rLy~vs~~~G~~~~~~v~~~~p~~~-s~-L~s~dvfILD~~~e~~IyvW~G~~ss~ 63 (121)
T d1d0na3 8 LAKLYKVSNGAGPMVVSLVADENPFAQ-GA-LRSEDCFILDHGKDGKIFVWKGKQANM 63 (121)
T ss_dssp CCEEEEEECSSSSCEEEEEESSSSBCG-GG-CCTTSEEEEEEGGGTEEEEEECTTSCH
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCH-HH-CCCCCEEEEEECCCCEEEEEECCCCCH
T ss_conf 877889988999889999725787688-89-799987999607888899973898998
No 33
>d2j9ub1 g.41.11.1 (B:115-161) Vacuolar protein-sorting-associated protein 36, VPS36 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=61.74 E-value=0.77 Score=20.11 Aligned_cols=17 Identities=24% Similarity=0.688 Sum_probs=14.4
Q ss_pred CEEEECCCCCCCCCCHH
Q ss_conf 44596579999789913
Q 006547 69 WAWTCSLCGSLNGLSSQ 85 (641)
Q Consensus 69 ~~w~C~lC~~~N~~p~~ 85 (641)
.+|+|++|+..|.+..+
T Consensus 2 s~W~CPICm~~Ne~~~e 18 (47)
T d2j9ub1 2 STWVCPICMVSNETQGE 18 (47)
T ss_dssp EEEECTTTCCEEEESSC
T ss_pred CCEECCEEEEECCCEEE
T ss_conf 50553613664100125
No 34
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=59.00 E-value=1.2 Score=18.99 Aligned_cols=28 Identities=25% Similarity=0.776 Sum_probs=17.5
Q ss_pred CCCCCCEEEECC-----------CEEEC--CEEEECCCCCC
Q ss_conf 787877035156-----------24536--44596579999
Q 006547 52 RCENCYAYFNTY-----------CELEQ--WAWTCSLCGSL 79 (641)
Q Consensus 52 RC~~C~ayiNp~-----------~~~~~--~~w~C~lC~~~ 79 (641)
+|..|+-..+|- ..|++ ..|+|+.|+..
T Consensus 4 ~C~~CgyiYd~~~Gd~~~gi~pGT~f~dLP~dw~CP~C~a~ 44 (53)
T d1brfa_ 4 VCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAP 44 (53)
T ss_dssp EETTTCCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred ECCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 87999918886557845687999997898998889299894
No 35
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=56.27 E-value=3.7 Score=16.04 Aligned_cols=29 Identities=24% Similarity=0.523 Sum_probs=22.1
Q ss_pred CCCCCCCCCEEEECCCEEECCEEEECCCCCCC
Q ss_conf 98878787703515624536445965799997
Q 006547 49 MLPRCENCYAYFNTYCELEQWAWTCSLCGSLN 80 (641)
Q Consensus 49 ~p~RC~~C~ayiNp~~~~~~~~w~C~lC~~~N 80 (641)
..+.|.+|++ -|.--|+..|+|+-|++.=
T Consensus 2 ~lP~CP~C~s---eytYedg~l~vCPeC~hEW 30 (38)
T d2akla2 2 TLPPCPQCNS---EYTYEDGALLVCPECAHEW 30 (38)
T ss_dssp CSCCCTTTCC---CCCEECSSSEEETTTTEEE
T ss_pred CCCCCCCCCC---CCEECCCCEEECCCCCCCC
T ss_conf 7886887898---0357379997897555747
No 36
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=54.61 E-value=1.4 Score=18.52 Aligned_cols=29 Identities=24% Similarity=0.652 Sum_probs=18.6
Q ss_pred CCCCCCCEEEECC----CEEEC--CEEEECCCCCC
Q ss_conf 8787877035156----24536--44596579999
Q 006547 51 PRCENCYAYFNTY----CELEQ--WAWTCSLCGSL 79 (641)
Q Consensus 51 ~RC~~C~ayiNp~----~~~~~--~~w~C~lC~~~ 79 (641)
-+|+.|+-..+|- ..|++ ..|+|++|+..
T Consensus 4 y~C~~CgyiYd~~~Gdgt~Fe~LP~dw~CP~C~a~ 38 (45)
T d6rxna_ 4 YVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 38 (45)
T ss_dssp EEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCEEECCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 59089980878644799897788987789599892
No 37
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=52.29 E-value=1.7 Score=18.10 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=18.7
Q ss_pred CCCCCCCCCEEEECC-----------CEEEC--CEEEECCCCCC
Q ss_conf 988787877035156-----------24536--44596579999
Q 006547 49 MLPRCENCYAYFNTY-----------CELEQ--WAWTCSLCGSL 79 (641)
Q Consensus 49 ~p~RC~~C~ayiNp~-----------~~~~~--~~w~C~lC~~~ 79 (641)
.--+|+.|+-.-+|- ..|++ ..|+|+.|+..
T Consensus 6 ~ky~C~~CgyiYDp~~GD~~~gI~pGT~F~dLP~dW~CP~Cga~ 49 (70)
T d1dx8a_ 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred CEEECCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 70782999908783447845687989996788898789399996
No 38
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=51.85 E-value=1.7 Score=18.04 Aligned_cols=29 Identities=24% Similarity=0.654 Sum_probs=17.4
Q ss_pred CCCCCCCEEEECCC-----------EEEC--CEEEECCCCCC
Q ss_conf 87878770351562-----------4536--44596579999
Q 006547 51 PRCENCYAYFNTYC-----------ELEQ--WAWTCSLCGSL 79 (641)
Q Consensus 51 ~RC~~C~ayiNp~~-----------~~~~--~~w~C~lC~~~ 79 (641)
-+|..|+-..+|-- .|++ ..|+|+.|+..
T Consensus 4 y~C~~CgyiYdp~~Gd~~~gi~pGT~F~~LP~~w~CP~C~a~ 45 (52)
T d2dsxa1 4 YVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGAS 45 (52)
T ss_dssp EEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 790899908775548835587999997888997899299891
No 39
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=49.01 E-value=2 Score=17.61 Aligned_cols=28 Identities=29% Similarity=0.756 Sum_probs=15.2
Q ss_pred CCCCCCEEEECC-----------CEEEC--CEEEECCCCCC
Q ss_conf 787877035156-----------24536--44596579999
Q 006547 52 RCENCYAYFNTY-----------CELEQ--WAWTCSLCGSL 79 (641)
Q Consensus 52 RC~~C~ayiNp~-----------~~~~~--~~w~C~lC~~~ 79 (641)
+|..|+-..+|- ..|++ ..|+|+.|+..
T Consensus 5 ~C~~CgyiYd~~~Gd~~~gi~pGT~F~~LP~dw~CP~C~a~ 45 (53)
T d1iroa_ 5 TCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVG 45 (53)
T ss_dssp EETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred ECCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 90999928885548845687989997888998899399894
No 40
>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}
Probab=48.60 E-value=2.4 Score=17.18 Aligned_cols=28 Identities=25% Similarity=0.694 Sum_probs=14.7
Q ss_pred CCCCCCEEEECC-----------CEEEC--CEEEECCCCCC
Q ss_conf 787877035156-----------24536--44596579999
Q 006547 52 RCENCYAYFNTY-----------CELEQ--WAWTCSLCGSL 79 (641)
Q Consensus 52 RC~~C~ayiNp~-----------~~~~~--~~w~C~lC~~~ 79 (641)
+|..|+-.-+|- ..|++ ..|+|+.|+..
T Consensus 6 ~C~~CgyiYdp~~Gd~~~gi~pGT~F~~LP~dw~CP~C~a~ 46 (56)
T d1s24a_ 6 ICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGAT 46 (56)
T ss_dssp EETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCC
T ss_pred ECCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 88999938885547845686989975568987799499895
No 41
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=46.32 E-value=3.6 Score=16.09 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=20.3
Q ss_pred CCCCCCCCCEEEECCCEEECCEEEECCCCCCCCCCHH
Q ss_conf 9887878770351562453644596579999789913
Q 006547 49 MLPRCENCYAYFNTYCELEQWAWTCSLCGSLNGLSSQ 85 (641)
Q Consensus 49 ~p~RC~~C~ayiNp~~~~~~~~w~C~lC~~~N~~p~~ 85 (641)
.|++|.+||--.+. ++ .+==+|+-|+....-|+.
T Consensus 66 ~Pp~CrkCGfvFr~--~~-kkPSRCP~CKSE~Ie~P~ 99 (105)
T d2gmga1 66 KPAQCRKCGFVFKA--EI-NIPSRCPKCKSEWIEEPR 99 (105)
T ss_dssp CCCBBTTTCCBCCC--CS-SCCSSCSSSCCCCBCCCC
T ss_pred ECHHHHHCCCEECC--CC-CCCCCCCCCCCCCCCCCC
T ss_conf 38415236776056--68-999989988872635985
No 42
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=39.98 E-value=5.6 Score=14.94 Aligned_cols=31 Identities=29% Similarity=0.683 Sum_probs=23.2
Q ss_pred CCCCCCCEEEECCCEEEC------CEEEECCCCCCCC
Q ss_conf 878787703515624536------4459657999978
Q 006547 51 PRCENCYAYFNTYCELEQ------WAWTCSLCGSLNG 81 (641)
Q Consensus 51 ~RC~~C~ayiNp~~~~~~------~~w~C~lC~~~N~ 81 (641)
..|..|+.++-.-|.... ..|+|.+|...-.
T Consensus 66 ~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k~re 102 (124)
T d1zbdb_ 66 VVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQRE 102 (124)
T ss_dssp EECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHH
T ss_conf 8672478601158877756899997989806752699
No 43
>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.13 E-value=5.7 Score=14.90 Aligned_cols=29 Identities=24% Similarity=0.513 Sum_probs=23.2
Q ss_pred CCCCCCCCEEEECCCEEEC-CEEEECCCCC
Q ss_conf 8878787703515624536-4459657999
Q 006547 50 LPRCENCYAYFNTYCELEQ-WAWTCSLCGS 78 (641)
Q Consensus 50 p~RC~~C~ayiNp~~~~~~-~~w~C~lC~~ 78 (641)
+.+|.+|++---|..+-.. .+-.||-||-
T Consensus 2 ~r~C~~Cgtt~Tp~WR~gp~G~~LCNACGl 31 (39)
T d1y0ja1 2 ARECVNCGATATPLWRRDRTGHYLCNACGL 31 (39)
T ss_dssp CCCCSSSCCCCCSCCEECTTSCEECSSHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEHHHHH
T ss_conf 399879989789654329999983177678
No 44
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=32.23 E-value=7.1 Score=14.31 Aligned_cols=27 Identities=11% Similarity=-0.073 Sum_probs=19.1
Q ss_pred CCCCCEEEECCCEEECCEEEECCCCCC
Q ss_conf 878770351562453644596579999
Q 006547 53 CENCYAYFNTYCELEQWAWTCSLCGSL 79 (641)
Q Consensus 53 C~~C~ayiNp~~~~~~~~w~C~lC~~~ 79 (641)
|..|++..|-+..--...++|-.||..
T Consensus 5 c~~cG~~Yh~~~~pPk~~g~CD~cg~~ 31 (37)
T d2ak3a2 5 HPGSGRVYNIEFNPPKTMGIDDLTGEP 31 (37)
T ss_dssp ETTTTEEEETTTBCCSSTTBCTTTCCB
T ss_pred ECCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf 177587021045774466886477982
No 45
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.20 E-value=8.1 Score=13.97 Aligned_cols=28 Identities=4% Similarity=-0.089 Sum_probs=20.3
Q ss_pred CCCCCCEEEECCCEEECCEEEECCCCCC
Q ss_conf 7878770351562453644596579999
Q 006547 52 RCENCYAYFNTYCELEQWAWTCSLCGSL 79 (641)
Q Consensus 52 RC~~C~ayiNp~~~~~~~~w~C~lC~~~ 79 (641)
-|..|++..|-+..--...++|-.|+..
T Consensus 4 ~C~~cG~~Yh~~~~ppk~~g~CD~cg~~ 31 (38)
T d1akya2 4 IHPASGRSYHKIFNPPKEDMKDDVTGEA 31 (38)
T ss_dssp ECTTTCCEEETTTBCCSSTTBCTTTCCB
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCE
T ss_conf 8847466454423586767845788998
No 46
>d1ee8a3 g.39.1.8 (A:211-266) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=31.25 E-value=10 Score=13.38 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=20.1
Q ss_pred CCCCCCCEEEECCCEEEC-CEEEECCCCCCCC
Q ss_conf 878787703515624536-4459657999978
Q 006547 51 PRCENCYAYFNTYCELEQ-WAWTCSLCGSLNG 81 (641)
Q Consensus 51 ~RC~~C~ayiNp~~~~~~-~~w~C~lC~~~N~ 81 (641)
-.|.+|++-|--. .+.+ ..|.|+-|....+
T Consensus 26 ~~C~~C~~~I~~~-~~~~R~t~~Cp~CQ~~~p 56 (56)
T d1ee8a3 26 LPCPACGRPVERR-VVAGRGTHFCPTCQGEGP 56 (56)
T ss_dssp SBCTTTCCBCEEE-ESSSCEEEECTTTTTCCC
T ss_pred CCCCCCCCEEEEE-EECCCCCEECCCCCCCCC
T ss_conf 6335499637899-998975889957427987
No 47
>d1hk8a_ c.7.1.3 (A:) Class III anaerobic ribonucleotide reductase NRDD subunit {Bacteriophage T4 [TaxId: 10665]}
Probab=29.98 E-value=9.4 Score=13.58 Aligned_cols=13 Identities=0% Similarity=-0.079 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 6999999997606
Q 006547 211 FKENITSALETLR 223 (641)
Q Consensus 211 ~~~~i~~ll~~l~ 223 (641)
.++.+..++-+|.
T Consensus 146 v~q~~Q~f~~nlN 158 (561)
T d1hk8a_ 146 VYDAFQAYEYEVN 158 (561)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHEEECC
T ss_conf 9998876224246
No 48
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=29.19 E-value=8.2 Score=13.95 Aligned_cols=27 Identities=4% Similarity=-0.105 Sum_probs=17.6
Q ss_pred CCCCCEEEECCCEEECCEEEECCCCCC
Q ss_conf 878770351562453644596579999
Q 006547 53 CENCYAYFNTYCELEQWAWTCSLCGSL 79 (641)
Q Consensus 53 C~~C~ayiNp~~~~~~~~w~C~lC~~~ 79 (641)
|..|++..|-+..--...++|-.|+..
T Consensus 5 c~~cG~~Yh~~~~PPk~~g~CD~cg~~ 31 (35)
T d1e4va2 5 HAPSGRVYHVKFNPPKVEGKDDVTGEE 31 (35)
T ss_dssp ETTTTEEEETTTBCCSSTTBCTTTCCB
T ss_pred CCCCCCHHHHCCCCCCCCCCCCCCCCE
T ss_conf 768677232004764458812677897
No 49
>d1k3xa3 g.39.1.8 (A:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=28.57 E-value=9.7 Score=13.51 Aligned_cols=29 Identities=17% Similarity=0.289 Sum_probs=18.6
Q ss_pred CCCCCCCCEEEECCCEEECCEEEECCCCC
Q ss_conf 88787877035156245364459657999
Q 006547 50 LPRCENCYAYFNTYCELEQWAWTCSLCGS 78 (641)
Q Consensus 50 p~RC~~C~ayiNp~~~~~~~~w~C~lC~~ 78 (641)
--.|.+|++-|.-...-....|.|+-|.+
T Consensus 12 g~pC~~C~~~I~~~~~~gR~t~~Cp~CQ~ 40 (40)
T d1k3xa3 12 GEPCERCGSIIEKTTLSSRPFYWCPGCQH 40 (40)
T ss_dssp TSBCTTTCCBCEEEEETTEEEEECTTTCC
T ss_pred CCCCCCCCCEEEEEEECCCCCEECHHHCC
T ss_conf 78268698889899988997788956588
No 50
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}
Probab=25.48 E-value=10 Score=13.38 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=16.2
Q ss_pred CCCCCEEEECCCEEECCEEEECCCCC
Q ss_conf 87877035156245364459657999
Q 006547 53 CENCYAYFNTYCELEQWAWTCSLCGS 78 (641)
Q Consensus 53 C~~C~ayiNp~~~~~~~~w~C~lC~~ 78 (641)
|..|++..|-+..--...++|-.|+.
T Consensus 5 C~~CG~~Yh~~~~pPk~~g~CD~cg~ 30 (35)
T d1s3ga2 5 CKVCGTSYHLLFNPPQVEGKCDKDGG 30 (35)
T ss_dssp ETTTCCEEETTTBCCSBTTBCTTTCC
T ss_pred CCCCCCHHCCCCCCCCCCCCCCCCCC
T ss_conf 85747511456679888883679899
No 51
>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.30 E-value=9.3 Score=13.62 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=24.6
Q ss_pred CCCCCCCCCEEEECCCEEEC-CEEEECCCCCC
Q ss_conf 98878787703515624536-44596579999
Q 006547 49 MLPRCENCYAYFNTYCELEQ-WAWTCSLCGSL 79 (641)
Q Consensus 49 ~p~RC~~C~ayiNp~~~~~~-~~w~C~lC~~~ 79 (641)
....|.+|++---|..+-+. +...||-||-.
T Consensus 3 ~g~~C~nCgt~~Tp~WRr~~~G~~lCNACGl~ 34 (66)
T d3gata_ 3 AGTVCSNCQTSTTTLWRRSPMGDPVCNACGLY 34 (66)
T ss_dssp TTCCCTTTCCCCCSSEEECTTSCEEEHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 97998898998885533189998032046789
No 52
>d2apob1 g.41.16.1 (B:403-457) Ribosome biogenesis protein Nop10 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=24.89 E-value=11 Score=13.24 Aligned_cols=27 Identities=22% Similarity=0.585 Sum_probs=19.1
Q ss_pred CCCCCCCCCEEEECCCEEECCEEEECCCCCCCCCC
Q ss_conf 98878787703515624536445965799997899
Q 006547 49 MLPRCENCYAYFNTYCELEQWAWTCSLCGSLNGLS 83 (641)
Q Consensus 49 ~p~RC~~C~ayiNp~~~~~~~~w~C~lC~~~N~~p 83 (641)
.+-||.+|++|- -+=+|+.||.....+
T Consensus 3 klrkC~~C~~YT--------L~~~CP~CG~~t~~a 29 (55)
T d2apob1 3 RMKKCPKCGLYT--------LKEICPKCGEKTVIP 29 (55)
T ss_dssp CCEECTTTCCEE--------SSSBCSSSCSBCBCC
T ss_pred CEEECCCCCCEE--------CCCCCCCCCCCCCCC
T ss_conf 323487366543--------345276788865766
No 53
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.70 E-value=11 Score=13.27 Aligned_cols=26 Identities=27% Similarity=0.588 Sum_probs=15.1
Q ss_pred CCCCCEEEECCCEEECCEEEECCCCC
Q ss_conf 87877035156245364459657999
Q 006547 53 CENCYAYFNTYCELEQWAWTCSLCGS 78 (641)
Q Consensus 53 C~~C~ayiNp~~~~~~~~w~C~lC~~ 78 (641)
|..|++..|-+..--...++|-.|+.
T Consensus 5 C~~CG~~Yh~~~~pPk~~g~CD~cG~ 30 (35)
T d1zina2 5 CRNCGATYHLIFHPPAKPGVCDKCGG 30 (35)
T ss_dssp ETTTCCEEETTTBCCSSTTBCTTTCC
T ss_pred CCCCCCHHCCCCCCCCCCCCCCCCCC
T ss_conf 86767521265679887884779899
No 54
>d1b3ta_ d.58.8.1 (A:) Epstein barr virus nuclear antigen-1 (ebna1) {Epstein-Barr virus [TaxId: 10376]}
Probab=21.10 E-value=16 Score=12.24 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHCCC---CCEEEEEEECCEEE
Q ss_conf 46899999999999970999---96999986163389
Q 006547 134 EEFLELTRSALQAALEAVPS---GALFGLATFSHKIG 167 (641)
Q Consensus 134 ~~~l~~~~~~l~~~l~~l~~---~~~vglItf~~~V~ 167 (641)
..+.+.++++|+.-+..-|. +.+|-+++||+.|-
T Consensus 109 ~~fAe~~kDAi~Dyi~t~P~PT~~~~VtvcsFdd~V~ 145 (147)
T d1b3ta_ 109 HIFAEVLKDAIKDLVMTKPAPTCNIRVTVCSFDDGVD 145 (147)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
T ss_conf 5789999999999870799997644799996788875
No 55
>d1r2za3 g.39.1.8 (A:229-274) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.42 E-value=16 Score=12.15 Aligned_cols=30 Identities=13% Similarity=0.250 Sum_probs=18.2
Q ss_pred CCCCCCCCCEEEECCCEEECCEEEECCCCC
Q ss_conf 988787877035156245364459657999
Q 006547 49 MLPRCENCYAYFNTYCELEQWAWTCSLCGS 78 (641)
Q Consensus 49 ~p~RC~~C~ayiNp~~~~~~~~w~C~lC~~ 78 (641)
.--.|.+|++-|.--..-....|.|+-|..
T Consensus 17 ~g~~C~~C~~~I~~~~~~gR~t~~Cp~CQK 46 (46)
T d1r2za3 17 QGNPCKRCGTPIEKTVVAGRGTHYCPRCQR 46 (46)
T ss_dssp TTSBCTTTCCBCEEEEETTEEEEECTTTCC
T ss_pred CCCCCCCCCCEEEEEEECCCCCEECHHHCC
T ss_conf 897248799769999998976787864577
Done!