Query 006552
Match_columns 641
No_of_seqs 286 out of 858
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 18:50:12 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006552.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2178-2181//hhsearch_pdb/006552hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cc1_A BH1870 protein, putativ 1.0 1 1 351.6 18.8 344 219-641 13-391 (433)
2 1zy9_A Alpha-galactosidase; TM 1.0 1 1 310.2 31.7 397 135-641 121-543 (564)
3 3lrk_A Alpha-galactosidase 1; 1.0 1 1 303.7 20.8 315 218-641 30-378 (479)
4 3a21_A Putative secreted alpha 1.0 1 1 298.8 21.4 319 218-641 12-346 (614)
5 3hg3_A Alpha-galactosidase A; 1.0 1 1 297.5 21.9 300 218-641 9-343 (404)
6 1uas_A Alpha-galactosidase; TI 1.0 1 1 291.8 22.3 301 219-641 10-322 (362)
7 3a5v_A Alpha-galactosidase; be 1.0 1 1 288.9 23.5 310 218-640 9-345 (397)
8 1szn_A Alpha-galactosidase; (b 1.0 1 1 282.3 20.5 250 219-560 13-304 (417)
9 4do4_A Alpha-N-acetylgalactosa 1.0 1 1 267.3 15.6 301 219-641 10-343 (400)
10 4fnq_A Alpha-galactosidase AGA 1.0 1 1 213.8 37.5 350 144-571 254-643 (729)
No 1
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=1.00 E-value=1 Score=351.59 Aligned_cols=344 Identities=18% Similarity=0.181 Sum_probs=229.7
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHH----HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75323411122356987899999987----84999993899806888767999988754653233467676444575348
Q 006552 219 KFGWCTWDAFYLTVQPHGVMEGVKGL----VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN 294 (641)
Q Consensus 219 ~~GWCTWdafy~~Vtee~I~~~l~~L----~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~n 294 (641)
.||||||++||++|||++|++.++.+ ++.|+. |++||||||..+++.. ..+.. .......+.++.++
T Consensus 13 p~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~--~~~iDDgW~~~~~~~~---~y~~~----~~~~~d~~G~~~~~ 83 (433)
T 3cc1_A 13 PMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWE--YIVVDIQWYEPTANSS---AYNPF----APLCMDEYGRLLPA 83 (433)
T ss_dssp CEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCC--EEEECSCTTCCCTTST---TCCTT----SCSCBCTTSCBCCC
T ss_pred CEEEECHHHHCCCCCHHHHHHHHHHHHHCCHHHCCE--EEEECCCCCCCCCCCC---CCCCC----CCCCCCCCCCEEEC
T ss_conf 879988566187579999999999998154631975--9998887577888665---44545----54562788988678
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf -7789999999999999987799999997615995489998311466676578999999875101367899963234200
Q 006552 295 -FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL 373 (641)
Q Consensus 295 -~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd~ 373 (641)
+|||+.. .+.|||+++++||++ | +| +|+|..+.-.+..+.++++.... ..+.+|+
T Consensus 84 ~~kFP~~~--------~~~Gl~~l~~~ih~~-G-lk-~Giw~~p~i~~~~v~~~s~~~~~-------------~~~~~di 139 (433)
T 3cc1_A 84 TNRFPSAK--------NGAGFKPLSDAIHDL-G-LK-FGIHIMRGIPRQAVYENSPVLGS-------------TKTAREI 139 (433)
T ss_dssp TTTCGGGT--------TTTTTHHHHHHHHHT-T-CE-EEEEEESSEEHHHHHHTCBCTTS-------------SCBHHHH
T ss_pred CCCCCCCC--------CCCCHHHHHHHHHHC-C-CE-EEEEECCCCCHHCCCCCCCCCCC-------------CCEECCC
T ss_conf 76687766--------678989999999986-9-84-58995787720103789854466-------------5311001
Q ss_pred HHCCCC------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 100210------27778889899999999999999780997999926411444320269800489999999999998314
Q 006552 374 AVDKIV------NNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHF 447 (641)
Q Consensus 374 a~~~~~------~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~~si~r~F 447 (641)
+....+ ..++++.+| +++.||+.++++|++|||||||+|+|+.. .+. .+ ..+..++|++||+++
T Consensus 140 ~~~~~~~~~~~~~~~lD~~~p-~~~~~~~~~~~~l~~~GvDyvK~D~~~~~-~~~-~~--~~~~~~~~~~aL~~~----- 209 (433)
T 3cc1_A 140 AHTNSICPWNTDMYGVDPTKE-GAQSYYNSLFELYAQWGVDFVKVDDIAAS-RLY-DT--HLEEIKMIQRAIQAC----- 209 (433)
T ss_dssp EETTCCBTTBTTEEEECTTST-THHHHHHHHHHHHHHTTCCEEEEESCSCT-TSS-CC--CHHHHHHHHHHHHHS-----
T ss_pred CCCCCCCCCCCCCEEECCCCH-HHHHHHHHHHHHHHHCCCCEEEECCCCCC-CCC-CC--CHHHHHHHHHHHHHC-----
T ss_conf 467766677887343258988-99999999999999729988986786665-678-53--279999999999862-----
Q ss_pred CCCCEEEECCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHCCCCCCCCCCCCCCC
Q ss_conf 898168502677731----112333321001236556689999999874543046888-643210025887789742434
Q 006552 448 KGNGVIASMEHCNDF----MLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVH-CAYNSLWMGNFIHPDWDMFQS 522 (641)
Q Consensus 448 ~g~~iI~CMs~~~~~----l~~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~Hi~~-~a~Nsl~~g~~~~PDwDMF~s 522 (641)
+++|+.|||+++.. .+..+..++| |+|+|++|.++ . ..+|+. +++++.+.++++|||+|||++
T Consensus 210 -gr~i~~slc~g~~~~~~~~~~~~~~n~w-R~s~D~~~~w~--------~--~~~~~~~~~~~~~~~~~g~~nD~Dml~v 277 (433)
T 3cc1_A 210 -GRPMVLSLSPGPAPIKYAHHFKTNANMW-RITDDFWDDWS--------L--LYQMFERCEVWEKHIGTGHWPDCGMLPL 277 (433)
T ss_dssp -SSCCEEECCCSBSSEESCSSSCCTTGGG-CCEECCCSCHH--------H--HHHHHHHHHHHHHSCCCSCCCBCCCBCC
T ss_pred -CCCEEEEECCCCCCHHHHHHHHHHCCEE-EECCCCCCCHH--------H--HHHHHHHHHHHHHHCCCCCCCCHHHHCC
T ss_conf -9987999337877745666665207679-86258644489--------9--9999999988886259972677078504
Q ss_pred CC-------------------CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 78-------------------63479999998709967874188999867773110899952100357976532234577
Q 006552 523 TH-------------------PCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADP 583 (641)
Q Consensus 523 ~h-------------------~~a~~HaaaRaisGgPvyiSD~pg~hd~~lL~~LvlpdG~ilR~~~pg~pt~d~lf~dp 583 (641)
.| .+.++|+++|||+++|||+||++.+.+-+.++-|+. -+|++.+..+.+.+. ++.+
T Consensus 278 g~~g~~~~~~~~~~~~~~lt~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N--~eviavnqdg~~~~~-v~~~- 353 (433)
T 3cc1_A 278 GHIGIRSVDGPGGDRWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTN--EGILSINQKSVLNRF-VYRE- 353 (433)
T ss_dssp SEECTTCSSSSSSSEECSSCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCC--HHHHHHHHHCEEEEE-EEEE-
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCC--HHHEEECCCCCCCEE-EEEC-
T ss_conf 676644545556555678999999999999998569558617613299999977559--665120577857524-5745-
Q ss_pred CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECEECCC
Q ss_conf 8898507999714664531130279996418999999987630278999998000279
Q 006552 584 LHDGKTMLKIWNLNKVCYWLWYHLIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWGI 641 (641)
Q Consensus 584 ~~d~~~~Lkiwn~n~~~g~~~~~vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~~ 641 (641)
+ -+.+|...-..| ..+|++| |.+.. +.+.++.|+.+|+
T Consensus 354 ---~--~~~vw~~~l~~g---~~~val~-N~~~~-----------~~~~~~~~~~lgl 391 (433)
T 3cc1_A 354 ---E--DKVAWAANGRNG---EAYVALF-NLHDQ-----------QKTLQFRLDMVGI 391 (433)
T ss_dssp ---T--TEEEEEEECSSS---CEEEEEE-ECSSS-----------CEEEEECGGGTTC
T ss_pred ---C--CCEEEEEECCCC---CEEEEEE-ECCCC-----------CEEEEEEHHHCCC
T ss_conf ---9--818999997999---8999999-68999-----------7789989999399
No 2
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=1.00 E-value=1 Score=310.21 Aligned_cols=397 Identities=13% Similarity=0.054 Sum_probs=260.0
Q ss_pred CEEEEEEEEECCEEEEECCCCCCCEEEEEECCCCCCCC-CCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 57999872408927882589998299999719952225-66415999974699789999999999975076877888999
Q 006552 135 PYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTG-DSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTP 213 (641)
Q Consensus 135 ~y~v~lpl~~~~~r~~l~~~~~~~~~i~~~sg~~~v~~-~~~~~~~~v~~g~dp~~~i~~A~~~v~~~~~tf~~~~~K~~ 213 (641)
.++++=.++...+++.|.-+ ++++.++++..++..+. .+....+ +..|++|.+++++..++.+++. +....+.+
T Consensus 121 ~~~~~G~~~~~~~~~~f~~~-~~~~~~~~~~~g~~~~~~~~~~~~~-~~~g~~~~~v~~~y~~l~g~~~---~p~w~~~~ 195 (564)
T 1zy9_A 121 EGKVYGFLSSKIAHPFFAVE-DGELVAYLEYFDVEFDDFVPLEPLV-VLEDPNTPLLLEKYAELVGMEN---NARVPKHT 195 (564)
T ss_dssp TTEEEEESCCSSSEEEEEEE-TTEEEEEEECTTCCEEEEEECCCEE-EEECSCHHHHHHHHHHHHHHHT---TCCCCSSC
T ss_pred CCEEEEEEECCCCCCEEEEE-CCCEEEEEECCCCCCCCEEECCEEE-EEECCCHHHHHHHHHHHHCCCC---CCCCCCCC
T ss_conf 86279998637766358973-5837999962796535414313099-9958999999999999866268---98545688
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97335753234111223569878999999878499999389980688876799998875465323346767644457534
Q 006552 214 PPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQE 293 (641)
Q Consensus 214 P~~~d~~GWCTWdafy~~Vtee~I~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~ 293 (641)
.+|||||++||+++|++.|++.++.+++.|+ .+++||||||+..+ +|..
T Consensus 196 -----P~gwnsW~~~~~~~te~~v~~~ad~~~~~G~--~~~~IDdgW~~~~G------------------------dw~~ 244 (564)
T 1zy9_A 196 -----PTGWCSWYHYFLDLTWEETLKNLKLAKNFPF--EVFQIDDAYEKDIG------------------------DWLV 244 (564)
T ss_dssp -----CEEEESHHHHGGGCCHHHHHHHHHHGGGTTC--SEEEECTTSEEETT------------------------EEEE
T ss_pred -----CEEECCHHCCCCCCCHHHHHHHHHHHHHCCC--CEEEECCCCCCCCC------------------------CCCC
T ss_conf -----3577152042757999999999999984598--29998865122258------------------------8553
Q ss_pred -CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf -8778999999999999998779999999761599548999831146667657899999987510136789996323420
Q 006552 294 -NFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMED 372 (641)
Q Consensus 294 -n~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd 372 (641)
++||| . |++++++||++ | +| +++|..+. .+.++++.++ .+||
T Consensus 245 d~~kFP-------------~-lk~lvd~lh~~-G-lk-~Giw~~P~----~v~~~S~ly~----------------~~pd 287 (564)
T 1zy9_A 245 TRGDFP-------------S-VEEMAKVIAEN-G-FI-PGIWTAPF----SVSETSDVFN----------------EHPD 287 (564)
T ss_dssp ECTTCC-------------C-HHHHHHHHHHT-T-CE-EEEEECTT----EEETTCHHHH----------------HCGG
T ss_pred CCCCCC-------------C-HHHHHHHHHHC-C-CE-EEEEECCC----CCCCCCHHHH----------------HCCC
T ss_conf 854589-------------9-89999999987-9-98-99996777----5688986688----------------6888
Q ss_pred HHHCC----------CC--CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 01002----------10--2777888989999999999999978099799992641144432026980048999999999
Q 006552 373 LAVDK----------IV--NNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALT 440 (641)
Q Consensus 373 ~a~~~----------~~--~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~ 440 (641)
+.+.. +. ...++..+| +++.|+.+..+.++++||||||+|++......+..++ .++.+++|+++|+
T Consensus 288 w~v~~~G~~~~~~~~W~~~~~~lD~t~P-~a~~~~~~~~~~~~~~GVD~iK~D~~~~~~~~g~~~~-~~~~~~~y~~~l~ 365 (564)
T 1zy9_A 288 WVVKENGEPKMAYRNWNKKIYALDLSKD-EVLNWLFDLFSSLRKMGYRYFKIDFLFAGAVPGERKK-NITPIQAFRKGIE 365 (564)
T ss_dssp GBCEETTEECEEEEETTEEEEEBCTTCH-HHHHHHHHHHHHHHHTTCCEEEECCGGGGGCSSBCSS-SCCHHHHHHHHHH
T ss_pred EEEECCCEEEEEECCCCCCEEECCCCCH-HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC-CCHHHHHHHHHHH
T ss_conf 6996599522200125786341289987-7999999999999864998899847887666654346-3549999999999
Q ss_pred HHHHHCCC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCCCCC
Q ss_conf 99983148-9816850267773111233332100123655668999999987454304688864321002588-778974
Q 006552 441 ASVRKHFK-GNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNF-IHPDWD 518 (641)
Q Consensus 441 ~si~r~F~-g~~iI~CMs~~~~~l~~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~Hi~~~a~Nsl~~g~~-~~PDwD 518 (641)
+ +.+.++ ..-+.+|+++. ....+..+++ |+|+|+.+.|.....- .......+.+.++++.+++... .|+|+|
T Consensus 366 ~-l~~~~pr~i~i~~C~~g~---~~s~~~~n~~-Ris~Di~~~W~s~~~~-~~~p~~~~~~~n~~~~~~~~~~~~~nDPD 439 (564)
T 1zy9_A 366 T-IRKAVGEDSFILGCGSPL---LPAVGCVDGM-RIGPDTAPFWGEHIED-NGAPAARWALRNAITRYFMHDRFWLNDPD 439 (564)
T ss_dssp H-HHHHHCTTSEEEECSCBS---GGGTTTCSEE-ECSSCCCSSCCTTSCS-SSSSCHHHHHHHHHHTGGGBTTTBEEECC
T ss_pred H-HHHHCCCCEEEEECCCCC---CCCCCCCCEE-EECCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9-996579972998048866---4421503468-9848846666663321-23478999999999888652687640798
Q ss_pred CCCCCC-------CCHHHHHHHHHHCCCCEEEECCCC---CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 243478-------634799999987099678741889---9986777311089995210035797653223457788985
Q 006552 519 MFQSTH-------PCAEFHAASRAISGGPIYVSDCVG---KHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGK 588 (641)
Q Consensus 519 MF~s~h-------~~a~~HaaaRaisGgPvyiSD~pg---~hd~~lL~~LvlpdG~ilR~~~pg~pt~d~lf~dp~~d~~ 588 (641)
|+.... .++++|++++||+|+|+++||++. .+++++|+.++..+|...|.. ++..+..
T Consensus 440 ml~vg~~~~~lT~~E~r~h~alwAi~g~PLiigddl~~l~~~~l~lL~evIavng~~~~~~------------~~~~~~~ 507 (564)
T 1zy9_A 440 CLILREEKTDLTQKEKELYSYTCGVLDNMIIESDDLSLVRDHGKKVLKETLELLGGRPRVQ------------NIMSEDL 507 (564)
T ss_dssp CBCCCSSSCCCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHHHHHTTCSSEEEET------------TTTCSSS
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEE------------CCCCCCE
T ss_conf 7575688899999999999999999708726636836599999999999999729830330------------5898724
Q ss_pred EEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECEECCC
Q ss_conf 07999714664531130279996418999999987630278999998000279
Q 006552 589 TMLKIWNLNKVCYWLWYHLIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWGI 641 (641)
Q Consensus 589 ~~Lkiwn~n~~~g~~~~~vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~~ 641 (641)
+..+|.-.... ..+|++| |.... +.+.++.|+++|+
T Consensus 508 -vw~v~a~~~~~----g~aValf-N~~~~-----------~~~~~~~~~~lgl 543 (564)
T 1zy9_A 508 -RYEIVSSGTLS----GNVKIVV-DLNSR-----------EYHLEKEGKSSLK 543 (564)
T ss_dssp -EEEEEEEEETT----EEEEEEE-ETTTT-----------EEEEECC------
T ss_pred -EEEEECCCCCC----CEEEEEE-ECCCC-----------CEEEEECHHHCCC
T ss_conf -89984677889----8899999-78999-----------7789955799587
No 3
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=1.00 E-value=1 Score=303.73 Aligned_cols=315 Identities=17% Similarity=0.169 Sum_probs=210.6
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC---CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5753234111223569878999999878499999---3899806888767999988754653233467676444575348
Q 006552 218 DKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPP---GLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN 294 (641)
Q Consensus 218 d~~GWCTWdafy~~Vtee~I~~~l~~L~~~Gip~---~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~n 294 (641)
..||||||++||++|||+.|++.++.+++.|++. .|++||||||.. ++.. .++.++
T Consensus 30 PpmGWNSW~~~~~~i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~~-rd~~--------------------G~~~~d 88 (479)
T 3lrk_A 30 PQMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYIILDDCWSSG-RDSD--------------------GFLVAD 88 (479)
T ss_dssp CCEEEESHHHHTTCCCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEEE-ECTT--------------------SCEEEC
T ss_pred CCEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC-CCCC--------------------CCEECC
T ss_conf 9569982572386789999999999998668500396289988723346-6889--------------------898258
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf -7789999999999999987799999997615995489998311466676578999999875101367899963234200
Q 006552 295 -FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL 373 (641)
Q Consensus 295 -~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd~ 373 (641)
+||| +|||+++++||++ | +| +|+|.. |.. .++.. .||+.+
T Consensus 89 ~~kFP-------------~Glk~Lad~ih~~-G-lK-fGIw~~---------pG~-----~tC~~----~pGsl~----- 129 (479)
T 3lrk_A 89 EQKFP-------------NGMGHVADHLHNN-S-FL-FGMYSS---------AGE-----YTCAG----YPGSLG----- 129 (479)
T ss_dssp TTTCT-------------TCHHHHHHHHHHT-T-CE-EEEEEE---------SSS-----BCTTS----SBCCTT-----
T ss_pred HHHCC-------------CCHHHHHHHHHHC-C-CE-EEEEEC---------CCC-----CCCCC----CCCHHH-----
T ss_conf 66558-------------8999999999977-9-83-699943---------765-----51047----885467-----
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 10021027778889899999999999999780997999926411444320269800489999999999998314898168
Q 006552 374 AVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVI 453 (641)
Q Consensus 374 a~~~~~~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~~si~r~F~g~~iI 453 (641)
+++...+.+++|||||||+|+|..... .+ ..+....-+.+|.+++.+. ||+|+
T Consensus 130 --------------------~~~~da~~fa~WGVDylK~D~c~~~~~----~~-~~~~~~~~y~~m~~AL~~t--GRpI~ 182 (479)
T 3lrk_A 130 --------------------REEEDAQFFANNRVDYLKYDNCYNKGQ----FG-TPEISYHRYKAMSDALNKT--GRPVF 182 (479)
T ss_dssp --------------------CHHHHHHHHHHTTCCEEEEECTTCTTC----CS-SHHHHHHHHHHHHHHHHHH--CSCCE
T ss_pred --------------------HHHHHHHHHHHHCCCEEEECCCCCCCC----CC-CCCHHHHHHHHHHHHHHHH--CCCEE
T ss_conf --------------------799999999982986899726778655----68-7200178999999999986--99828
Q ss_pred EECCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCC--------------C-CCCCCCCCHHHHH-HHHHHHCCCCCCC
Q ss_conf 50267773---11123333210012365566899999--------------9-9874543046888-6432100258877
Q 006552 454 ASMEHCND---FMLLGTEAIALGRVGDDFWCTDPSGD--------------P-NGTFWLQGCHMVH-CAYNSLWMGNFIH 514 (641)
Q Consensus 454 ~CMs~~~~---~l~~~~~~~~~~R~SDDf~p~dp~~~--------------p-~W~q~sh~~Hi~~-~a~Nsl~~g~~~~ 514 (641)
+++|++.. ..+..+..++| |+++|+++.+...+ | +| .| -..|+. ++..+.+.+++.|
T Consensus 183 ~Slc~Wg~~~~~~w~~~~~n~W-R~s~DI~d~W~~~~~~~~~~~~~~~~~~~g~~--~s-v~~i~~~~~~~~~~agpG~w 258 (479)
T 3lrk_A 183 YSLCNWGQDLTFYWGSGIANSW-RMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFH--CS-IMNILNKAAPMGQNAGVGGW 258 (479)
T ss_dssp EEECSTTTTTHHHHSTTTCSEE-ECSSCBCSCSSCCCTTSCSCTTCSSCSCCCSC--BC-HHHHHHHHGGGGGGCBTTBE
T ss_pred EEECCCCCCCHHHHHHHHCCEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--HH-HHHHHHHHHHHHHCCCCCCC
T ss_conf 9955676676255666438730-52588666655533343223432223345522--35-99999976555640599987
Q ss_pred CCCCCCCCCC-----CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCC--CCCCCCCCCC--CCCC
Q ss_conf 8974243478-----63479999998709967874188999867773110899952100357--9765322345--7788
Q 006552 515 PDWDMFQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYY--ALPTRDCLFA--DPLH 585 (641)
Q Consensus 515 PDwDMF~s~h-----~~a~~HaaaRaisGgPvyiSD~pg~hd~~lL~~LvlpdG~ilR~~~p--g~pt~d~lf~--dp~~ 585 (641)
||+||+..++ .+.+.|+++|||.++|++++++..+-+-+.|.-|+.++ |+..+.- |++-+.. .. ++-.
T Consensus 259 NDpDML~vGn~glT~~E~rthfslWai~~SPLiiG~DL~~~~~~tl~iLtN~e--vIAINQD~lG~q~~~v-~~~~~~~~ 335 (479)
T 3lrk_A 259 NDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKASSYSIYSQAS--VIAINQDSNGIPATRV-WRYYVSDT 335 (479)
T ss_dssp EECCSBCTTSTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTCHH--HHHHHTCTTCCCCEEE-EEEECSCC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCHH--HHHHHCCCCCCCEEEE-EECCCCCC
T ss_conf 89886766899989899999999999872954722771318988998855999--9987624567852897-50357655
Q ss_pred C--CCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECEECCC
Q ss_conf 9--8507999714664531130279996418999999987630278999998000279
Q 006552 586 D--GKTMLKIWNLNKVCYWLWYHLIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWGI 641 (641)
Q Consensus 586 d--~~~~Lkiwn~n~~~g~~~~~vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~~ 641 (641)
| +..-+.||...-..| ..+|++| |. +. ++.+.++.|+.+||
T Consensus 336 d~~~~~~~~VW~~~l~~G---~~aValf-N~-~~----------~~~~vtv~l~dlGL 378 (479)
T 3lrk_A 336 DEYGQGEIQMWSGPLDNG---DQVVALL-NG-GS----------VSRPMNTTLEEIFF 378 (479)
T ss_dssp CTTSCCEEEEEEEECTTS---CEEEEEE-EC-SS----------SCEEEEECHHHHTT
T ss_pred CCCCCCCCEEEEEECCCC---CEEEEEE-EC-CC----------CCEEEEEEHHHHCC
T ss_conf 456898727999998999---8999999-77-99----------97789988999578
No 4
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=1.00 E-value=1 Score=298.78 Aligned_cols=319 Identities=17% Similarity=0.154 Sum_probs=206.9
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC---CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 575323411122356987899999987849999---93899806888767999988754653233467676444575348
Q 006552 218 DKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN 294 (641)
Q Consensus 218 d~~GWCTWdafy~~Vtee~I~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~n 294 (641)
..||||||++|++++||+.|++.++.+++.|+. ..||+||||||...+|.. .++.++
T Consensus 12 ~p~gwnsw~~~~~~~~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~--------------------g~~~~~ 71 (614)
T 3a21_A 12 APMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSA--------------------GNITVD 71 (614)
T ss_dssp CCEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTT--------------------CCBCCC
T ss_pred CCEEEECHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCCCC--------------------CCEEEC
T ss_conf 964998254117657999999999999870778639789999787578986889--------------------998788
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf -7789999999999999987799999997615995489998311466676578999999875101367899963234200
Q 006552 295 -FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL 373 (641)
Q Consensus 295 -~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd~ 373 (641)
+||| +||++++++||++ | || +|+|+.+. +.. +.-.+|...+
T Consensus 72 ~~~fP-------------~gl~~l~~~i~~~-G-lk-~gi~~~~~-----~~~--------~~~~~p~~~~--------- 113 (614)
T 3a21_A 72 TAEWP-------------GGMSAITAYIHSK-G-LK-AGIYTDAG-----KDG--------CGYYYPTGRP--------- 113 (614)
T ss_dssp TTTST-------------TCHHHHHHHHHHT-T-CE-EEEEEESS-----SSC--------HHHHSCSSSC---------
T ss_pred CCCCC-------------CCHHHHHHHHHHC-C-CE-EEEEECCC-----CCC--------CCCCCCCCCC---------
T ss_conf 01037-------------7589999999977-9-86-58996387-----754--------3333777777---------
Q ss_pred HHCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 1002102777888989-999999999999978099799992641144432026980048999999999999831489816
Q 006552 374 AVDKIVNNGVGFVPPE-LVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGV 452 (641)
Q Consensus 374 a~~~~~~~G~glv~p~-~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~~si~r~F~g~~i 452 (641)
..|. .++.||+..++++++|||||||+|++...+. . ...++..+++.+||..++.+. +++|
T Consensus 114 ------------~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~~~~~~---~-~~~~~~y~~~~~al~~~~~~~--gr~i 175 (614)
T 3a21_A 114 ------------AAPGSGSEGHYDQDMLQFSTWGFDFVKVDWCGGDAE---G-LDAATTYKSISDAVGRAAATT--GRPL 175 (614)
T ss_dssp ------------CCTTCSCTTCHHHHHHHHHHHTCSEEEEECHHHHHH---T-CCHHHHHHHHHHHHHHHHHHH--SCCC
T ss_pred ------------CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC---C-CCHHHHHHHHHHHHHHHHHHC--CCCE
T ss_conf ------------887602577999999999875986798656678654---4-105778999999999999853--9976
Q ss_pred EEECCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC----
Q ss_conf 850267773---1112333321001236556689999999874543046888643210025887789742434786----
Q 006552 453 IASMEHCND---FMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHP---- 525 (641)
Q Consensus 453 I~CMs~~~~---~l~~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~Hi~~~a~Nsl~~g~~~~PDwDMF~s~h~---- 525 (641)
+.|||++.. ..+.....++| |+++|+++.+. +|.| .....+++.. ...+..+++.|||+||+...+.
T Consensus 176 ~~s~c~~g~~~~~~~~~~~~~~w-R~~~Di~~~~~--~~~~--~~~~~~~~~~-~~~~~~~pg~~nD~Dml~~g~~~~t~ 249 (614)
T 3a21_A 176 TLSICNWGYQNPWNWAAGQAPLW-RTSTDIIYYGN--QPSM--TSLLSNFDQT-LHPTAQHTGYYNDPDMLMVGMDGFTA 249 (614)
T ss_dssp EEEECCTTTTCGGGTCTTTCSEE-ECSSCSCCTTS--CCCH--HHHHHHHHHH-CCTTTCBTTBEEECCSCCTTCTTCCH
T ss_pred EEEECCCCCCCHHHHHHCCCCCC-CCCCCCCCCCC--CCCH--HHHHHHHHHH-HHHHHHCCCCCCCCCEEEECCCCCCH
T ss_conf 99845776677556420327600-03402123345--5756--8999999986-46886389950688754327999899
Q ss_pred -CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCC--CCCCCCCCCCCCCCCCCEEEEEEECCCC-CC
Q ss_conf -3479999998709967874188999867773110899952100357--9765322345778898507999714664-53
Q 006552 526 -CAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYY--ALPTRDCLFADPLHDGKTMLKIWNLNKV-CY 601 (641)
Q Consensus 526 -~a~~HaaaRaisGgPvyiSD~pg~hd~~lL~~LvlpdG~ilR~~~p--g~pt~d~lf~dp~~d~~~~Lkiwn~n~~-~g 601 (641)
+.+.|++++||+++||++||++.+++.+.|+-|..++ +++.... |.+- ..+..++ + -+.||...-- .|
T Consensus 250 ~e~~~~~alwai~~sPL~~g~Dl~~~~~~~~~il~n~e--~ia~~qd~~g~~~-~~v~~~~---~--~~~vw~~~l~~~g 321 (614)
T 3a21_A 250 AQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPE--VIAVDQDSRGLQG-VKVAEDT---T--GLQAYGKVLSGTG 321 (614)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCGGGCCHHHHHHHTCHH--HHHHHTCTTCCCC-EEEEEEE---T--TEEEEEEECSSSS
T ss_pred HHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCHH--HHHHCCCCCCCCC-EEEEECC---C--CEEEEEEECCCCC
T ss_conf 99999999999876952750772308998987754967--7643355457786-7988568---9--7399998747899
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECEECCC
Q ss_conf 1130279996418999999987630278999998000279
Q 006552 602 WLWYHLIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWGI 641 (641)
Q Consensus 602 ~~~~~vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~~ 641 (641)
..+|++| |... .+.+.++.|+.+|+
T Consensus 322 ---~~~v~~~-N~~~-----------~~~~~~~~l~~lg~ 346 (614)
T 3a21_A 322 ---NRAVVLL-NRTS-----------AAHDITVRWSDLGL 346 (614)
T ss_dssp ---CEEEEEE-ECSS-----------SCEEEEEEHHHHTB
T ss_pred ---CEEEEEE-ECCC-----------CCEEEEEEHHHHCC
T ss_conf ---4999999-8899-----------97889998899388
No 5
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=1.00 E-value=1 Score=297.47 Aligned_cols=300 Identities=16% Similarity=0.124 Sum_probs=200.5
Q ss_pred CCCCCCCCCCCCCC----------CCHHHHHHHHHHHHHCCCC---CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 57532341112235----------6987899999987849999---9389980688876799998875465323346767
Q 006552 218 DKFGWCTWDAFYLT----------VQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQM 284 (641)
Q Consensus 218 d~~GWCTWdafy~~----------Vtee~I~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~ 284 (641)
..||||||++||++ |||+.|++.++.|++.|++ ..|++||||||...++..
T Consensus 9 ppmGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~---------------- 72 (404)
T 3hg3_A 9 PTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSE---------------- 72 (404)
T ss_dssp CCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTT----------------
T ss_pred CCEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCC----------------
T ss_conf 9637775765555865454556785999999999999977747659819999887677887889----------------
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6444575348-778999999999999998779999999761599548999831146667657899999987510136789
Q 006552 285 PCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLS 363 (641)
Q Consensus 285 ~~rL~~~~~n-~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~s 363 (641)
.++.++ +||| +||++++++||++ | +| +|+|.. +.. .+|.. .
T Consensus 73 ----G~~~~~~~kFP-------------~Gl~~l~~~ih~~-G-lk-~Giw~~---------~g~-----~tC~~----~ 114 (404)
T 3hg3_A 73 ----GRLQADPQRFP-------------HGIRQLANYVHSK-G-LK-LGIYAD---------VGN-----KTCAG----F 114 (404)
T ss_dssp ----SCCCBCTTTST-------------THHHHHHHHHHHT-T-CE-EEEEEE---------SSS-----BCTTS----S
T ss_pred ----CCEEECHHHCC-------------CCHHHHHHHHHHC-C-CE-EEEEEC---------CCC-----CCCCC----C
T ss_conf ----98600854359-------------9999999999977-9-73-689953---------786-----64689----8
Q ss_pred CCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99632342001002102777888989999999999999978099799992641144432026980048999999999999
Q 006552 364 PGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASV 443 (641)
Q Consensus 364 pG~~~~~pd~a~~~~~~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~~si 443 (641)
||+.+ +++...+.+++|||||||+|+|+.-. . ...+.-+.+|.+++
T Consensus 115 pGs~~-------------------------~~~~da~~fa~WGvDylK~D~C~~~~--------~-~~~~~~y~~m~~AL 160 (404)
T 3hg3_A 115 PGSFG-------------------------YYDIDAQTFADWGVDLLKFAGCYCDS--------L-ENLADGYKHMSLAL 160 (404)
T ss_dssp BCCTT-------------------------CHHHHHHHHHHHTCCEEEEECCSCSC--------H-HHHHHHHHHHHHHH
T ss_pred CCCHH-------------------------HHHHHHHHHHHHCCCEEEECCCCCCC--------C-HHHHHHHHHHHHHH
T ss_conf 76278-------------------------79999999998598189864767875--------2-45789999999999
Q ss_pred HHCCCCCCEEEECCCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHCC
Q ss_conf 831489816850267773111---------2333321001236556689999999874543046888-----64321002
Q 006552 444 RKHFKGNGVIASMEHCNDFML---------LGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVH-----CAYNSLWM 509 (641)
Q Consensus 444 ~r~F~g~~iI~CMs~~~~~l~---------~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~Hi~~-----~a~Nsl~~ 509 (641)
.+. ||+|+++ |.++...+ ..+..++| |+++|+++.+. | -..|+. ++..+-+.
T Consensus 161 ~~t--GRpi~~s-c~w~~~~~~~~~~~~~~~~~~~n~W-R~~~Di~d~W~---------s-v~~i~~~~~~~~~~~~~~a 226 (404)
T 3hg3_A 161 NRT--GRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHW-RNFADIDDSWK---------S-IKSILDWTSFNQERIVDVA 226 (404)
T ss_dssp HHT--TCCCEEE-ECTGGGGTTTSCCCHHHHHHHCSEE-ECSCCCCSSHH---------H-HHHHHHHHHHTHHHHTTTC
T ss_pred HHC--CCCEEEE-ECCCCCCCCCCCCCHHHHHHHCCEE-EECCCCCCCHH---------H-HHHHHHHHHHHHHHHHHHC
T ss_conf 960--9988998-0788665655662367775017378-95398575667---------7-9999988765425667504
Q ss_pred CCCCCCCCCCCCCCC-----CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCC--CCCCCCCCCCC
Q ss_conf 588778974243478-----63479999998709967874188999867773110899952100357--97653223457
Q 006552 510 GNFIHPDWDMFQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYY--ALPTRDCLFAD 582 (641)
Q Consensus 510 g~~~~PDwDMF~s~h-----~~a~~HaaaRaisGgPvyiSD~pg~hd~~lL~~LvlpdG~ilR~~~p--g~pt~d~lf~d 582 (641)
+++.|+|+||+..++ .+.+.|+++|||+++|+++|++..+-+-+.|.-|+.++ |+..+.- |.+.+. ++.+
T Consensus 227 gpG~wnDpDML~vGn~glT~~E~rthfslWai~~sPLiiG~Dl~~~~~~tl~iLtN~e--vIAinQD~lG~q~~~-v~~~ 303 (404)
T 3hg3_A 227 GPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKD--VIAINQDPLGKQGYQ-LRQG 303 (404)
T ss_dssp BTTBEEECCCBCTTSSSCCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHH--HHHHHTCTTCCCCEE-EEEE
T ss_pred CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCHH--HHHHHCCCCCCCCEE-EEEC
T ss_conf 8988689761222899989899999999999855854841772428989998865988--875522556776469-8865
Q ss_pred CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECEECCC
Q ss_conf 78898507999714664531130279996418999999987630278999998000279
Q 006552 583 PLHDGKTMLKIWNLNKVCYWLWYHLIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWGI 641 (641)
Q Consensus 583 p~~d~~~~Lkiwn~n~~~g~~~~~vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~~ 641 (641)
+ -+.||...-..| ..+|++| |.... + .+.+.++.|+.+|+
T Consensus 304 ----~--~~~VW~~~l~~g---~~aValf-N~~~~-~--------~~~~vtv~~~~lGl 343 (404)
T 3hg3_A 304 ----D--NFEVWERPLSGL---AWAVAMI-NRQEI-G--------GPRSYTIAVASLGK 343 (404)
T ss_dssp ----T--TEEEEEEECSTT---CEEEEEE-ECCCS-S--------SCEEEEEEGGGSGG
T ss_pred ----C--CEEEEEEECCCC---CEEEEEE-ECCCC-C--------CCEEEEEEHHHCCC
T ss_conf ----9--858999997999---7899999-75898-8--------76699988999298
No 6
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=291.76 Aligned_cols=301 Identities=17% Similarity=0.181 Sum_probs=198.5
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC---CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 75323411122356987899999987849999---93899806888767999988754653233467676444575348-
Q 006552 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN- 294 (641)
Q Consensus 219 ~~GWCTWdafy~~Vtee~I~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~n- 294 (641)
.||||||++|++++||+.|++.++.+++.|++ ..|++||||||...++.. .+|.++
T Consensus 10 p~gwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~--------------------G~~~~~~ 69 (362)
T 1uas_A 10 QMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQ--------------------GNFVPNR 69 (362)
T ss_dssp CEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTT--------------------SCCCBCT
T ss_pred CEEEECHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCCCCCC--------------------CCEEECH
T ss_conf 87998889877788999999999999976962219759998787577887899--------------------9866881
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 77899999999999999877999999976159954899983114666765789999998751013678999632342001
Q 006552 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (641)
Q Consensus 295 ~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd~a 374 (641)
+||| +|||+++++||++ | || +|+|+.....|.. + ..||+
T Consensus 70 ~~FP-------------~Gl~~l~~~ih~~-G-lk-~Giw~~~~~~~~~--~---------------~~pg~-------- 108 (362)
T 1uas_A 70 QTFP-------------SGIKALADYVHAK-G-LK-LGIYSDAGSQTCS--N---------------KMPGS-------- 108 (362)
T ss_dssp TTCT-------------TCHHHHHHHHHHT-T-CE-EEEEEESSSBCTT--S---------------SSBCC--------
T ss_pred HCCC-------------CCHHHHHHHHHHC-C-CE-EEEEEECCCCCCC--C---------------CCCCC--------
T ss_conf 1068-------------6689999999977-9-87-6899507876145--8---------------99870--------
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 00210277788898999999999999997809979999264114443202698004899999999999983148981685
Q 006552 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIA 454 (641)
Q Consensus 375 ~~~~~~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~~si~r~F~g~~iI~ 454 (641)
+.+++..++.+++|||||||+|+|.... . ...+.| .++.+++.+.++..-+-.
T Consensus 109 -----------------~~~~~~~~~~~~~wGvdyvK~D~~~~~~-----~----~~~~~y-~~~~~al~~~~~~i~~~~ 161 (362)
T 1uas_A 109 -----------------LDHEEQDVKTFASWGVDYLKYDNCNDAG-----R----SVMERY-TRMSNAMKTYGKNIFFSL 161 (362)
T ss_dssp -----------------TTCHHHHHHHHHHHTCCEEEEECCCCTT-----C----CHHHHH-HHHHHHHHHHCTTSEEEE
T ss_pred -----------------HHHHHHHHHHHHHCCCCEEEECCCCCCC-----C----CHHHHH-HHHHHHHHHHCCCCEEEE
T ss_conf -----------------0479999999997699889987637899-----7----889999-999999986399948995
Q ss_pred ECCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC-----CCHH
Q ss_conf 02677-73111233332100123655668999999987454304688864321002588778974243478-----6347
Q 006552 455 SMEHC-NDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTH-----PCAE 528 (641)
Q Consensus 455 CMs~~-~~~l~~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~Hi~~~a~Nsl~~g~~~~PDwDMF~s~h-----~~a~ 528 (641)
|+++. .+..+.++..++| |+|+|++|.++ . ....+-.+++.+.+.+++.|+|+||++..+ .+.+
T Consensus 162 c~~g~~~p~~w~~~~~n~~-R~~~D~~~~w~--------~-~~~~~~~~~~~~~~~~pg~~~D~Dml~vg~~~~t~~e~~ 231 (362)
T 1uas_A 162 CEWGKENPATWAGRMGNSW-RTTGDIADNWG--------S-MTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYR 231 (362)
T ss_dssp ESTTTTCGGGTGGGTCSEE-ECSSCCCSSHH--------H-HHHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHH
T ss_pred CCCCCCCHHHHHHHHEEEE-EECCCCCCCCH--------H-HHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCCHHHHH
T ss_conf 6788887477785230088-73488776716--------6-999999998778733898406950512589988989999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCC--CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEE
Q ss_conf 9999998709967874188999867773110899952100357--97653223457788985079997146645311302
Q 006552 529 FHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYY--ALPTRDCLFADPLHDGKTMLKIWNLNKVCYWLWYH 606 (641)
Q Consensus 529 ~HaaaRaisGgPvyiSD~pg~hd~~lL~~LvlpdG~ilR~~~p--g~pt~d~lf~dp~~d~~~~Lkiwn~n~~~g~~~~~ 606 (641)
.|++++|++++||++++++.+.+-+.+.-|..++ ++..+.- |.+-+... .+ + -..||...--.| ..
T Consensus 232 ~~~al~~i~~spL~~~~Dl~~~~~~~~~~l~n~e--via~~qd~lg~~~~~v~-~~----~--~~~v~a~~~~~~---~~ 299 (362)
T 1uas_A 232 SHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSE--VIAVNQDSLGVQGKKVQ-SD----N--GLEVWAGPLSNN---RK 299 (362)
T ss_dssp HHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHH--HHHHHTCTTCCCCEEEE-EE----T--TEEEEEEECSTT---CE
T ss_pred HHHHHHHHHCCCEEECCCHHHCCHHHHHHHCCHH--HHHHCCCCCCCCCEEEE-EC----C--CEEEEEEECCCC---CE
T ss_conf 9999999847964731770028999997643877--75204665575626999-56----9--807999996899---89
Q ss_pred EEEEEECCCCCCCCCCCCCEEEEEEEEEECEECCC
Q ss_conf 79996418999999987630278999998000279
Q 006552 607 LIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWGI 641 (641)
Q Consensus 607 vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~~ 641 (641)
+|++| |.... +.+.++.|+.+|+
T Consensus 300 ~v~~~-N~~~~-----------~~~~~~~l~~lgl 322 (362)
T 1uas_A 300 AVVLW-NRQSY-----------QATITAHWSNIGL 322 (362)
T ss_dssp EEEEE-ECSSS-----------CEEEEEEGGGTTC
T ss_pred EEEEE-ECCCC-----------CEEEEEEHHHCCC
T ss_conf 99999-47998-----------7789988999299
No 7
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=1.00 E-value=1 Score=288.95 Aligned_cols=310 Identities=16% Similarity=0.152 Sum_probs=201.3
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC---CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 575323411122356987899999987849999---93899806888767999988754653233467676444575348
Q 006552 218 DKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN 294 (641)
Q Consensus 218 d~~GWCTWdafy~~Vtee~I~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~n 294 (641)
-.||||||++|++++||+.|++.++.+++.|++ ..|++||||||...++.. .+|.++
T Consensus 9 pp~gwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~--------------------G~~~~~ 68 (397)
T 3a5v_A 9 PQMGWNTWNKYGCNVDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESS--------------------KTLLAD 68 (397)
T ss_dssp CCEEEESHHHHGGGCCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTT--------------------SCCCBC
T ss_pred CCEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC--------------------CCEEEC
T ss_conf 988998879858688999999999999976982149569999888677887888--------------------986778
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf -7789999999999999987799999997615995489998311466676578999999875101367899963234200
Q 006552 295 -FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL 373 (641)
Q Consensus 295 -~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd~ 373 (641)
+||| +|||+++++||++ | || +|+|+.. .. .++- ..||+.
T Consensus 69 ~~kFP-------------~Gl~~l~~~i~~~-G-lk-~Giw~~p---------g~-----~tc~----~~pg~~------ 108 (397)
T 3a5v_A 69 PTKFP-------------RGIKPLVDDIHNL-G-LK-AGIYSSA---------GT-----LTCG----GHIASL------ 108 (397)
T ss_dssp TTTCT-------------TCHHHHHHHHHHT-T-CE-EEEEEES---------SS-----BCTT----SCBCCT------
T ss_pred HHCCC-------------CCHHHHHHHHHHC-C-CE-EEEEECC---------CC-----CCCC----CCHHHH------
T ss_conf 00178-------------5799999999986-9-97-7999328---------98-----7668----877788------
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 10021027778889899999999999999780997999926411444320269800489999999999998314898168
Q 006552 374 AVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVI 453 (641)
Q Consensus 374 a~~~~~~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~~si~r~F~g~~iI 453 (641)
.|++..++++++|||||||+|++...... + ...+..+.+++|.+++.+.+ ++|+
T Consensus 109 -------------------~~~~~~~~~~~~wGvdyvK~D~~~~~~~~----~-~~~~~~~~y~~m~~~L~~~~--~~i~ 162 (397)
T 3a5v_A 109 -------------------GYEDIDAKTWAKWGIDYLKYDNCYNQGQS----G-TPKLSYDRYKAMGNALNKTG--RPML 162 (397)
T ss_dssp -------------------TCHHHHHHHHHHHTCCEEEEECTTCTTCC----S-SHHHHHHHHHHHHHHHHHTC--SCCE
T ss_pred -------------------HHHHHHHHHHHHCCCCEEEECCCCCCCCC----C-CCCHHHHHHHHHHHHHHHHC--CCCE
T ss_conf -------------------88899999998759988988887677767----8-83025899999999999668--9958
Q ss_pred EECCCCC-CC--CCCCCCCCCCCCCCCCCCCCCCCCC------------CCCCCCCCCHHHH-HHHHHHHCCCCCCCCCC
Q ss_conf 5026777-31--1123333210012365566899999------------9987454304688-86432100258877897
Q 006552 454 ASMEHCN-DF--MLLGTEAIALGRVGDDFWCTDPSGD------------PNGTFWLQGCHMV-HCAYNSLWMGNFIHPDW 517 (641)
Q Consensus 454 ~CMs~~~-~~--l~~~~~~~~~~R~SDDf~p~dp~~~------------p~W~q~sh~~Hi~-~~a~Nsl~~g~~~~PDw 517 (641)
.++|.+. +. .+..+..++| |+|+|++|++.... |-|. .| -..++ .++..+-+.+++.|+|+
T Consensus 163 ~~~c~~G~~~~~~w~~~~~n~w-R~s~Di~~~w~~~~~~~~~~~~~~~~~~~~-~s-~~~~~~~~~~~~~~~~pg~~nD~ 239 (397)
T 3a5v_A 163 YSLCNWGEDGPWNFASTISNSW-RISGDVYDNFNRPDPACPCTTYDCVLAGFR-CS-VMNIINKAVAVSQKARSGGWNDL 239 (397)
T ss_dssp EEECSTTTTCHHHHSTTTCSEE-ECSSCBCSCSSCCCTTSCCCSSCCSCCCSC-BC-HHHHHHHHHHHGGGCBTTBEEEC
T ss_pred EEECCCCCCCHHHHHHHCCCEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CH-HHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9965677776056774107479-976776776444444443233333455532-12-99999973145763488746785
Q ss_pred CCCCCCC-----CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCC--CCCCCCCCCCCCCCCCCEE
Q ss_conf 4243478-----63479999998709967874188999867773110899952100357--9765322345778898507
Q 006552 518 DMFQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYY--ALPTRDCLFADPLHDGKTM 590 (641)
Q Consensus 518 DMF~s~h-----~~a~~HaaaRaisGgPvyiSD~pg~hd~~lL~~LvlpdG~ilR~~~p--g~pt~d~lf~dp~~d~~~~ 590 (641)
||+...+ .+.+.|++++||+++||++|++..+.+-+.++-|..++ +++...- |.+-+..+ .++ -
T Consensus 240 Dml~vg~~~lt~~E~~~~~alwai~~sPL~~g~Dl~~~~~~~~~il~N~e--~iai~qd~~g~~~~~v~-----~~g--~ 310 (397)
T 3a5v_A 240 DMLEVGNGGMNQEEYRVHYTIWAALKSPLILGNDVTNITNTTKEIIMNKE--VIAVNQDSSFSPANRIW-----VKG--D 310 (397)
T ss_dssp CCBCTTSSSSCHHHHHHHHHHHHHTTCCEEECSCSSSCCHHHHHHHCCHH--HHHHHTCTTCCCCEEEE-----EET--T
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHCCHHHHHHHCCHH--HHHHCCCCCCCCCEEEE-----CCC--C
T ss_conf 22003899989999999999999865961754760018988997733899--98634443466641432-----389--8
Q ss_pred EEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECEECC
Q ss_conf 99971466453113027999641899999998763027899999800027
Q 006552 591 LKIWNLNKVCYWLWYHLIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWG 640 (641)
Q Consensus 591 Lkiwn~n~~~g~~~~~vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~ 640 (641)
+.||...-..| ..+||+| |... ++.+.+|.|+.+|
T Consensus 311 ~~vw~~~l~~g---~~~v~~~-N~~~-----------~~~~~~v~l~~lg 345 (397)
T 3a5v_A 311 QQLFSGNLANN---TQVVILL-NAGD-----------SAAKMTATWDDIW 345 (397)
T ss_dssp EEEEEEEETTT---EEEEEEE-ECSS-----------SCEEEEEEHHHHT
T ss_pred CEEEEEECCCC---CEEEEEE-ECCC-----------CCEEEEEEHHHHC
T ss_conf 25899997999---7899999-7799-----------9767998899936
No 8
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=1.00 E-value=1 Score=282.32 Aligned_cols=250 Identities=16% Similarity=0.193 Sum_probs=175.6
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC---CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 75323411122356987899999987849999---93899806888767999988754653233467676444575348-
Q 006552 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN- 294 (641)
Q Consensus 219 ~~GWCTWdafy~~Vtee~I~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~n- 294 (641)
.||||||++||+++||+.|++.++.+++.|++ ..|++||||||...++. +.++.++
T Consensus 13 pmgwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~--------------------~G~~~~~~ 72 (417)
T 1szn_A 13 SLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV--------------------DGHIAPNA 72 (417)
T ss_dssp CEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB--------------------TTBCCBCT
T ss_pred CEEEECHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCC--------------------CCCEEECC
T ss_conf 7899826725857899999999999987683552987899878746799888--------------------89877773
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 77899999999999999877999999976159954899983114666765789999998751013678999632342001
Q 006552 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (641)
Q Consensus 295 ~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd~a 374 (641)
+||| +||++++++||++ | +| +|+|+... | +++.. .||+.+.+
T Consensus 73 ~kFP-------------~Gl~~l~~~i~~~-G-lk-~Giw~~~g-------~-------~~c~~----~Pgs~~~~---- 114 (417)
T 1szn_A 73 TRFP-------------DGIDGLAKKVHAL-G-LK-LGIYSTAG-------T-------ATCAG----YPASLGYE---- 114 (417)
T ss_dssp TTCT-------------THHHHHHHHHHHT-T-CE-EEEEEESS-------S-------BCTTS----CBCCTTCH----
T ss_pred CCCC-------------CCHHHHHHHHHHC-C-CE-EEEEECCC-------C-------CHHCC----CCCHHHHH----
T ss_conf 2377-------------5799999999976-9-98-79991799-------7-------43036----94257589----
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH-----------------------------CC
Q ss_conf 0021027778889899999999999999780997999926411444320-----------------------------26
Q 006552 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCE-----------------------------NY 425 (641)
Q Consensus 375 ~~~~~~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~-----------------------------~~ 425 (641)
+..++.+++|||||||+|++.....+.. ++
T Consensus 115 ---------------------~~d~~~~~~wGvdylK~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~g~~~~p~~~~~~~ 173 (417)
T 1szn_A 115 ---------------------DVDAADFADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGY 173 (417)
T ss_dssp ---------------------HHHHHHHHHTTCCEEEEECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTC
T ss_pred ---------------------HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ---------------------99999999759999998998885331123444555444444444433334544465321
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH-
Q ss_conf 980048999999999999831489816850267773---1112333321001236556689999999874543046888-
Q 006552 426 GGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCND---FMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVH- 501 (641)
Q Consensus 426 g~rv~l~~ay~~AL~~si~r~F~g~~iI~CMs~~~~---~l~~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~Hi~~- 501 (641)
....+..+..+++|++++.+.+ ++|+.++|.+.. ..+..+..++| |+|+|+++.++ . ..+|+.
T Consensus 174 ~~~~~~~~~~Y~~m~~aL~~~~--~~i~~~~C~~G~~~~~~w~~~~~n~w-R~s~D~~d~w~--------~--~~~i~~~ 240 (417)
T 1szn_A 174 DWSTSKSAERFGAMRNALAKQS--HEIVLSMCIWGQADVFSWGNSTGISW-RMSDDISPNWG--------S--VTRILNL 240 (417)
T ss_dssp CGGGSHHHHHHHHHHHHHHTSS--SCCEEEECCTTGGGHHHHGGGTCSEE-ECSSCCCSSHH--------H--HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHC--CCEEEEECCCCCCCCHHHHHHCCCCE-EECCCCCCCHH--------H--HHHHHHH
T ss_conf 2330468999999999999868--99899967777776155676404302-21578552577--------8--9999998
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCC-----CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCC
Q ss_conf 64321002588778974243478-----634799999987099678741889998677731108
Q 006552 502 CAYNSLWMGNFIHPDWDMFQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSM 560 (641)
Q Consensus 502 ~a~Nsl~~g~~~~PDwDMF~s~h-----~~a~~HaaaRaisGgPvyiSD~pg~hd~~lL~~Lvl 560 (641)
+++...+.+.+.|+|+||+...+ .+.+.|++++|++|+|+++|+++.+-+-+.++-|..
T Consensus 241 ~~~~~~~~~~g~~~D~DmL~vg~~~~t~~E~r~~~alwa~~gspL~ig~dl~~l~~~~~~~L~N 304 (417)
T 1szn_A 241 NSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNINLLKN 304 (417)
T ss_dssp HHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTC
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCC
T ss_conf 7553310468530588634569999898999999999998489668637714299999988637
No 9
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=1.00 E-value=1 Score=267.30 Aligned_cols=301 Identities=13% Similarity=0.120 Sum_probs=195.1
Q ss_pred CCCCCCCCCCCCCCC----------HHHHHHHHHHHHHCCCCC---CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 753234111223569----------878999999878499999---3899806888767999988754653233467676
Q 006552 219 KFGWCTWDAFYLTVQ----------PHGVMEGVKGLVDGGCPP---GLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMP 285 (641)
Q Consensus 219 ~~GWCTWdafy~~Vt----------ee~I~~~l~~L~~~Gip~---~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~ 285 (641)
.|||||||+|+++|+ |+.|++.++.|++.|+.. .|++||||||..+.. .
T Consensus 10 pmGWnSW~~~~~~i~~~~~~~~~~se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~~rd~-~----------------- 71 (400)
T 4do4_A 10 PMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGRDA-S----------------- 71 (400)
T ss_dssp CEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEEEECT-T-----------------
T ss_pred CCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCC-C-----------------
T ss_conf 9731066753646673213333341999999999999776464197699987886668788-9-----------------
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 444575348-7789999999999999987799999997615995489998311466676578999999875101367899
Q 006552 286 CRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP 364 (641)
Q Consensus 286 ~rL~~~~~n-~KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~sp 364 (641)
.+ +.++ +||| +|||+++++||++ | || +|+|.....++ +..+ |
T Consensus 72 G~---~~~d~~rFP-------------~G~k~ladyih~~-G-lk-~Giy~~~~~~~--------------c~g~----~ 114 (400)
T 4do4_A 72 GR---LMPDPKRFP-------------HGIPFLADYVHSL-G-LK-LGIYADMGNFT--------------CMGY----P 114 (400)
T ss_dssp CC---EEECTTTST-------------TCHHHHHHHHHHT-T-CE-EEEEEEBSSBC--------------TTSC----B
T ss_pred CC---EEECCCCCC-------------CCCHHHHHHHHHC-C-CE-EEEECCCCCCC--------------CCCC----C
T ss_conf 98---857742377-------------6548999999877-9-55-88956787765--------------5897----8
Q ss_pred CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 96323420010021027778889899999999999999780997999926411444320269800489999999999998
Q 006552 365 GLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVR 444 (641)
Q Consensus 365 G~~~~~pd~a~~~~~~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~g~rv~l~~ay~~AL~~si~ 444 (641)
+. ...+++...+.+++|||||||+|++... ......++.++..++.
T Consensus 115 ~~------------------------~~~~~~~da~~~a~wGvdylK~D~~~~~----------~~~~~~~~~~~~~~~~ 160 (400)
T 4do4_A 115 GT------------------------TLDKVVQDAQTFAEWKVDMLKLDGCFST----------PEERAQGYPKMAAALN 160 (400)
T ss_dssp CB------------------------CGGGHHHHHHHHHHTTCCEEEEECTTCC----------HHHHHHHHHHHHHHHH
T ss_pred CH------------------------HHHHHHHHHHHHHHHCCCEEEECCCCCC----------HHHHHHHHHHHHHHHH
T ss_conf 30------------------------5769998887788758850743567687----------2666544157899999
Q ss_pred HCCCCCCEEEECCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH---HHHHHHHHHCCCCC
Q ss_conf 31489816850267773---------1112333321001236556689999999874543046---88864321002588
Q 006552 445 KHFKGNGVIASMEHCND---------FMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCH---MVHCAYNSLWMGNF 512 (641)
Q Consensus 445 r~F~g~~iI~CMs~~~~---------~l~~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~H---i~~~a~Nsl~~g~~ 512 (641)
++ ++.+..+.+.... ..+.....+++ |+++|+++.+. ...... ...+.....+.+..
T Consensus 161 ~~--g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-R~~~Di~~~w~--------~~~~~~~~~~~~~~~~~~~~~~~ 229 (400)
T 4do4_A 161 AT--GRPIAFSCSWPAYEGGLPPRVQYSLLADICNLW-RNYDDIQDSWW--------SVLSILNWFVEHQDILQPVAGPG 229 (400)
T ss_dssp HT--CSCCEEEECGGGGTTSSTTTCCHHHHHHHCSEE-ECSCCCCSSHH--------HHHHHHHHHHHTHHHHGGGCBTT
T ss_pred HH--CCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCC-CCCCCCCCCCC--------CHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 82--866100023341124556654211114412332-21376367632--------21217889999867766504788
Q ss_pred CCCCCCCCCCCCC-----CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCC--CCCCCCCCCCCCCC
Q ss_conf 7789742434786-----3479999998709967874188999867773110899952100357--97653223457788
Q 006552 513 IHPDWDMFQSTHP-----CAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRCEYY--ALPTRDCLFADPLH 585 (641)
Q Consensus 513 ~~PDwDMF~s~h~-----~a~~HaaaRaisGgPvyiSD~pg~hd~~lL~~LvlpdG~ilR~~~p--g~pt~d~lf~dp~~ 585 (641)
.|+|+||++.... +.+.|++++|++++|+++++++.+.+.+.++-|..+. +++.+.. |.+. +.++.+.
T Consensus 230 ~~~d~d~l~~~~~~~t~~e~~t~~slwa~~~spL~~g~Dl~~~~~~~~~lL~N~e--via~~qd~~g~~~-~~v~~~~-- 304 (400)
T 4do4_A 230 HWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNPL--MIKINQDPLGIQG-RRIHKEK-- 304 (400)
T ss_dssp BEEECCCCCTTSSSCCHHHHHHHHHHHHHTTCCEEECSCTTTCCHHHHHHHTCHH--HHHHHTCTTCCCC-EEEEECT--
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCHH--HHHHCCCCCCCCC-EEEECCC--
T ss_conf 7778754413578998899999999999972877852773328988999852946--5541542225376-5843489--
Q ss_pred CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECEECCC
Q ss_conf 98507999714664531130279996418999999987630278999998000279
Q 006552 586 DGKTMLKIWNLNKVCYWLWYHLIQTWTLCDGPDGHNPVANFYYLIFATVHWSYWGI 641 (641)
Q Consensus 586 d~~~~Lkiwn~n~~~g~~~~~vig~F~N~~g~~~w~~~~~~~~~~~~~~~~~~~~~ 641 (641)
....||....-.| ..+|++| |..+. .+.+.++.|+.+|+
T Consensus 305 ---~~~~vw~~~~~~g---~~~va~~-N~~~~----------~~~~~~~~l~~lGl 343 (400)
T 4do4_A 305 ---SLIEVYMRPLSNK---ASALVFF-SCRTD----------MPYRYHSSLGQLNF 343 (400)
T ss_dssp ---TSEEEEEEECGGG---CEEEEEE-ECCSS----------SCEEEEEEGGGGTC
T ss_pred ---CCEEEEEEECCCC---CEEEEEE-ECCCC----------CCEEEEEEHHHCCC
T ss_conf ---8428999996899---8999999-87899----------73799989899699
No 10
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=1.00 E-value=1 Score=213.83 Aligned_cols=350 Identities=14% Similarity=0.142 Sum_probs=202.1
Q ss_pred ECCEEEEECCCCCCCEEEEEECCC----CCCCC-CCCCE-EEEEEECCCHHHHHHHHHH-HHHHHHCCCCCCCCCCCCCC
Q ss_conf 089278825899982999997199----52225-66415-9999746997899999999-99975076877888999973
Q 006552 144 EGPFRASLQPGADDYVDVCVESGS----TKVTG-DSFRS-VVYVHLGDDPFKLVKDAMR-VVRSHLGTFKLLDEKTPPPI 216 (641)
Q Consensus 144 ~~~~r~~l~~~~~~~~~i~~~sg~----~~v~~-~~~~~-~~~v~~g~dp~~~i~~A~~-~v~~~~~tf~~~~~K~~P~~ 216 (641)
.|+++..++.+..+...+...-.. -..+. .+|.. .+++..+++-+.-+.+++. .+|.++..-+ ..++.+
T Consensus 254 sGn~~~~~e~~~~~~~~~~~G~~~~~~~~~L~pGesf~tp~~~~~~s~~g~~~~s~~~h~~~r~~~~~~~-~~~~~r--- 329 (729)
T 4fnq_A 254 SGNFLAQVEVDQFHTARVSMGINPFDFTWLLQPGESFQTPEVVMVYSDQGLNGMSQTYHELYRTRLARGA-FRDRER--- 329 (729)
T ss_dssp SSCEEEEEEECTTCCEEEEEEECCTTCCEEECTTCEEECCCEEEEEESBHHHHHHHHHHHHHHHHTSCST-TTTSCC---
T ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCC-CCCCCC---
T ss_conf 8974199999689978999851478886797898989802799999749778999999999997327886-445686---
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 357532341112235698789999998784999993899806888767999988754653233467676444575348-7
Q 006552 217 VDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-F 295 (641)
Q Consensus 217 ~d~~GWCTWdafy~~Vtee~I~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~~n-~ 295 (641)
.++||||++||+++||++|++.++.+++.|+. +++||||||..+++.. ..+.++.++ +
T Consensus 330 --Pv~~NsW~a~~~d~~e~~i~~~ad~aa~lG~e--~fviDDGWf~~r~~d~-----------------~~lGdW~~d~~ 388 (729)
T 4fnq_A 330 --PILINNWEATYFDFNEEKLVNIAKTEAELGIE--LFVLDDGWFGKRDDDR-----------------RSLGDWIVNRR 388 (729)
T ss_dssp --CCEEECSTTTTTCCCHHHHHHHHHHHHHHTCC--EEEECSCCBTTCCSTT-----------------SCTTCCSBCTT
T ss_pred --EEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC--EEEECCEEECCCCCCC-----------------CCCCCEEECHH
T ss_conf --36970655542258989999999999863862--9997662455789886-----------------56776777766
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 78999999999999998779999999761599548999831146667657899999987510136789996323420010
Q 006552 296 KFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAV 375 (641)
Q Consensus 296 KFP~~~~~~~~~~~~~~GLk~lV~~Ik~~~g~ik~VgvWHAl~GYWgGI~P~~~g~~~~s~l~~p~~spG~~~~~pd~a~ 375 (641)
||| +|||+++++||++ | +| +|+|..+. -+.|+++ +. ..+||++.
T Consensus 389 kFP-------------~Glk~Lad~vh~~-G-mk-fGLW~epe----~v~~~S~-------l~---------~~hPdw~~ 432 (729)
T 4fnq_A 389 KLP-------------NGLDGLAKQVNEL-G-MQ-FGLWVEPE----MVSPNSE-------LY---------RKHPDWCL 432 (729)
T ss_dssp TCT-------------THHHHHHHHHHHT-T-CE-EEEEECTT----EECSSSH-------HH---------HHCGGGBC
T ss_pred HCC-------------CCHHHHHHHHHHC-C-CE-EEEEEECC----CCCCCCH-------HH---------HHCCHHEE
T ss_conf 667-------------3099999999978-9-88-99996336----4189868-------88---------75936202
Q ss_pred CCC----C----CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHC-C--CCH----HHHHHHHHHHHH
Q ss_conf 021----0----277788898999999999999997809979999264114443202-6--980----048999999999
Q 006552 376 DKI----V----NNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCEN-Y--GGR----VDLAKAYYKALT 440 (641)
Q Consensus 376 ~~~----~----~~G~glv~p~~v~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~-~--g~r----v~l~~ay~~AL~ 440 (641)
..- . ...+++.+|+....+++.+.+.+++|||||||+|.+..+...+.. . ... ....+++++.++
T Consensus 433 ~~~~~~~~~~r~q~~LD~~~P~v~~y~~~~i~~ll~~~GidYiK~D~n~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~d 512 (729)
T 4fnq_A 433 HVPNRPRSEGRNQLVLDYSREDVCDYIIETISNVLASAPITYVKWDMNRHMTEIGSSALPPERQRETAHRYMLGLYRVMD 512 (729)
T ss_dssp CCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTTTCCEEEEECCCCCCSCCCTTSCGGGGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 26766873577642016777668999999999999877987899747878776778788823320579999999999999
Q ss_pred HHHHHCCCCCCEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC--CC--CCC
Q ss_conf 999831489816850267773111-2333321001236556689999999874543046888643210025--88--778
Q 006552 441 ASVRKHFKGNGVIASMEHCNDFML-LGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMG--NF--IHP 515 (641)
Q Consensus 441 ~si~r~F~g~~iI~CMs~~~~~l~-~~~~~~~~~R~SDDf~p~dp~~~p~W~q~sh~~Hi~~~a~Nsl~~g--~~--~~P 515 (641)
+ +.+.||+.-+.+|-+.....-+ ...+...+ +.||+..+. .+..|.. ..+++.. .. +.+
T Consensus 513 ~-L~~~~P~i~ie~C~~Gg~r~d~~~l~~~~~~-w~SD~~d~~------------~r~~i~~--g~s~~~p~~~~g~hv~ 576 (729)
T 4fnq_A 513 E-MTSRFPHILFESCSGGGGRFDPGMLYYMPQT-WTSDNTDAV------------SRLKIQY--GTSLVYPISAMGAHVS 576 (729)
T ss_dssp H-HHHHCTTCEEEEEBTBBTTCSHHHHTTSSEE-ECBSCCCHH------------HHHHHHH--HHTTTSCGGGEEEEEE
T ss_pred H-HHHHCCCCEEECCCCCCCCCCCHHHHCCCCE-EECCCCCHH------------HHHHHHH--CHHCCCCCHHCCCCCC
T ss_conf 9-9987889588715688898665065036641-156774067------------7899873--6010368031535766
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC---CHHHHHHHCC---------CCCCEEEECCC
Q ss_conf 97424347863479999998709967874188999---8677731108---------99952100357
Q 006552 516 DWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKH---NFPLLKRLSM---------PDGSILRCEYY 571 (641)
Q Consensus 516 DwDMF~s~h~~a~~HaaaRaisGgPvyiSD~pg~h---d~~lL~~Lvl---------pdG~ilR~~~p 571 (641)
|.++.++.. ....+..+++.+.||+.++.++.+- ..++||+.+. ..|.+.|...|
T Consensus 577 ~~~~~~~gr-~t~~e~r~~~al~g~l~~~~dl~~ls~e~~~~lk~~Ia~yK~~r~li~~G~~~rl~~p 643 (729)
T 4fnq_A 577 AVPNHQVGR-VASLKARGHVAMSGNFGYELDITKLTETEKQMIKQQVAFYKDVRRLVQFGTFYRLLSP 643 (729)
T ss_dssp CSSCSSSCC-CCCHHHHHHHHTTSEEEEESCGGGCCHHHHHHHHHHHHHHHHHHHHHHHSEEEEEECT
T ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
T ss_conf 873467767-1459999999987531216371459999999999999999987798737209924899
Done!