Query 006553
Match_columns 641
No_of_seqs 341 out of 1900
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 00:57:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006553.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006553hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02893 Cellulose synthase-li 100.0 8E-147 2E-151 1234.2 55.5 631 2-639 12-728 (734)
2 PLN02189 cellulose synthase 100.0 5E-145 1E-149 1240.3 47.7 624 2-640 237-1018(1040)
3 PLN02638 cellulose synthase A 100.0 5E-145 1E-149 1243.6 46.7 625 2-640 255-1057(1079)
4 PLN02436 cellulose synthase A 100.0 2E-144 3E-149 1234.4 50.3 624 2-640 271-1072(1094)
5 PLN02400 cellulose synthase 100.0 2E-144 4E-149 1239.3 45.9 625 2-640 262-1062(1085)
6 PLN02195 cellulose synthase A 100.0 1E-143 3E-148 1222.6 50.4 623 2-640 158-953 (977)
7 PLN02915 cellulose synthase A 100.0 1E-141 3E-146 1212.0 50.0 626 2-640 193-1022(1044)
8 PLN02248 cellulose synthase-li 100.0 2E-141 5E-146 1211.5 48.9 627 2-640 268-1116(1135)
9 PLN02190 cellulose synthase-li 100.0 3E-140 7E-145 1174.1 46.7 613 2-640 9-755 (756)
10 PF03552 Cellulose_synt: Cellu 100.0 3E-128 6E-133 1076.5 32.0 520 112-640 104-704 (720)
11 PRK11498 bcsA cellulose syntha 100.0 6.5E-72 1.4E-76 646.8 50.9 485 18-616 185-680 (852)
12 TIGR03030 CelA cellulose synth 100.0 1.1E-69 2.4E-74 630.1 49.7 486 18-619 56-570 (713)
13 PRK05454 glucosyltransferase M 100.0 7.7E-39 1.7E-43 367.1 47.9 352 17-452 40-420 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 1.4E-35 3E-40 328.5 34.0 229 90-411 72-308 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 7.4E-37 1.6E-41 314.5 20.1 233 95-405 1-253 (254)
16 COG1215 Glycosyltransferases, 100.0 4.5E-35 9.8E-40 321.9 28.7 229 92-409 53-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 2.3E-33 5.1E-38 308.1 36.9 229 89-410 50-286 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 1.7E-32 3.7E-37 303.5 34.9 280 89-460 45-341 (439)
19 PRK14716 bacteriophage N4 adso 100.0 1.6E-31 3.5E-36 297.3 33.4 265 89-434 62-355 (504)
20 PRK11234 nfrB bacteriophage N4 100.0 1.6E-30 3.4E-35 300.1 30.7 238 89-408 59-334 (727)
21 cd06437 CESA_CaSu_A2 Cellulose 100.0 3E-29 6.6E-34 252.8 18.8 220 93-403 1-232 (232)
22 cd06421 CESA_CelA_like CESA_Ce 100.0 7.8E-29 1.7E-33 248.3 19.0 227 93-407 1-234 (234)
23 cd06427 CESA_like_2 CESA_like_ 100.0 5.2E-28 1.1E-32 245.8 19.8 228 93-409 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 7.5E-28 1.6E-32 242.6 20.1 225 96-409 1-234 (236)
25 PRK15489 nfrB bacteriophage N4 100.0 2.3E-26 5E-31 262.8 30.9 240 89-407 67-341 (703)
26 PF13641 Glyco_tranf_2_3: Glyc 99.9 3.5E-28 7.7E-33 243.4 6.8 219 93-402 1-228 (228)
27 TIGR03472 HpnI hopanoid biosyn 99.9 6.8E-26 1.5E-30 245.8 23.0 224 90-404 38-273 (373)
28 cd04190 Chitin_synth_C C-termi 99.9 7.2E-26 1.6E-30 231.3 10.6 228 97-405 1-243 (244)
29 cd02520 Glucosylceramide_synth 99.9 1.1E-24 2.5E-29 214.4 17.1 188 93-402 1-195 (196)
30 COG2943 MdoH Membrane glycosyl 99.9 1.9E-21 4.2E-26 208.0 40.8 278 93-451 144-438 (736)
31 cd04192 GT_2_like_e Subfamily 99.9 1.6E-23 3.4E-28 208.6 18.8 218 97-402 1-229 (229)
32 cd06434 GT2_HAS Hyaluronan syn 99.9 1.1E-23 2.3E-28 211.7 17.6 227 94-405 1-234 (235)
33 cd06439 CESA_like_1 CESA_like_ 99.9 4.1E-22 8.8E-27 202.7 18.4 220 89-405 25-250 (251)
34 TIGR03469 HonB hopene-associat 99.9 1.1E-20 2.4E-25 205.8 30.7 227 89-400 36-279 (384)
35 cd02525 Succinoglycan_BP_ExoA 99.8 1.3E-19 2.9E-24 182.7 18.6 222 94-409 1-233 (249)
36 cd06436 GlcNAc-1-P_transferase 99.8 1.9E-19 4.2E-24 176.9 15.5 164 97-301 1-177 (191)
37 PF13632 Glyco_trans_2_3: Glyc 99.8 6.6E-19 1.4E-23 172.5 16.7 137 214-403 1-143 (193)
38 cd06438 EpsO_like EpsO protein 99.8 2.8E-18 6.1E-23 166.9 11.5 162 97-300 1-168 (183)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 2.1E-16 4.6E-21 154.8 16.8 188 93-376 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 6.2E-16 1.3E-20 151.6 15.1 190 96-376 1-195 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.6 4.2E-15 9E-20 156.3 18.0 193 96-377 1-220 (299)
42 PF13506 Glyco_transf_21: Glyc 99.6 2.7E-15 5.9E-20 146.2 13.2 154 192-401 15-175 (175)
43 PLN02726 dolichyl-phosphate be 99.6 1.3E-14 2.9E-19 147.8 18.5 200 90-376 6-212 (243)
44 cd06433 GT_2_WfgS_like WfgS an 99.6 5.6E-15 1.2E-19 143.3 14.0 187 96-376 1-188 (202)
45 cd02522 GT_2_like_a GT_2_like_ 99.6 1.9E-14 4.1E-19 143.0 16.8 178 95-373 1-178 (221)
46 cd04186 GT_2_like_c Subfamily 99.6 2.9E-14 6.4E-19 134.0 13.8 157 97-376 1-159 (166)
47 cd02526 GT2_RfbF_like RfbF is 99.6 1.7E-14 3.6E-19 145.1 12.7 191 97-376 1-198 (237)
48 cd06442 DPM1_like DPM1_like re 99.6 1.2E-13 2.5E-18 137.6 17.8 191 97-376 1-197 (224)
49 cd04196 GT_2_like_d Subfamily 99.6 6E-14 1.3E-18 138.1 14.8 190 96-376 1-197 (214)
50 cd06420 GT2_Chondriotin_Pol_N 99.6 6.3E-14 1.4E-18 135.0 14.7 167 97-376 1-174 (182)
51 cd04185 GT_2_like_b Subfamily 99.5 1.7E-13 3.7E-18 134.7 15.9 162 97-376 1-167 (202)
52 cd06913 beta3GnTL1_like Beta 1 99.5 3.2E-13 7E-18 134.9 15.5 196 97-377 1-204 (219)
53 PF00535 Glycos_transf_2: Glyc 99.5 1.1E-13 2.4E-18 129.3 10.2 162 96-301 1-167 (169)
54 PF03142 Chitin_synth_2: Chiti 99.5 5.8E-12 1.2E-16 140.5 24.2 170 211-406 201-377 (527)
55 PRK10073 putative glycosyl tra 99.5 3.3E-13 7.1E-18 144.3 13.1 198 91-377 4-211 (328)
56 cd06423 CESA_like CESA_like is 99.5 1.1E-13 2.3E-18 129.5 8.1 159 97-301 1-168 (180)
57 PRK10063 putative glycosyl tra 99.4 4.1E-12 8.9E-17 130.6 18.4 190 93-379 1-193 (248)
58 cd04188 DPG_synthase DPG_synth 99.4 3.6E-12 7.9E-17 126.5 15.5 106 97-240 1-110 (211)
59 TIGR01556 rhamnosyltran L-rham 99.4 2.9E-12 6.3E-17 133.3 14.6 187 101-376 2-195 (281)
60 PRK10018 putative glycosyl tra 99.3 8.9E-12 1.9E-16 130.3 14.1 107 91-239 3-112 (279)
61 PTZ00260 dolichyl-phosphate be 99.3 9E-11 1.9E-15 125.9 21.4 128 90-252 67-201 (333)
62 cd04179 DPM_DPG-synthase_like 99.3 1.3E-11 2.7E-16 119.1 11.3 161 97-301 1-165 (185)
63 cd04187 DPM1_like_bac Bacteria 99.2 1.3E-10 2.8E-15 112.3 13.8 128 155-301 30-161 (181)
64 PF10111 Glyco_tranf_2_2: Glyc 99.2 3.6E-10 7.8E-15 118.3 17.0 204 96-376 1-216 (281)
65 PRK13915 putative glucosyl-3-p 99.2 4.5E-10 9.7E-15 119.1 17.6 121 90-251 28-152 (306)
66 COG1216 Predicted glycosyltran 99.1 4.4E-10 9.5E-15 118.9 13.4 197 92-376 2-214 (305)
67 PRK10714 undecaprenyl phosphat 99.1 9.1E-09 2E-13 110.1 21.1 109 92-239 5-117 (325)
68 cd00761 Glyco_tranf_GTA_type G 99.1 1.4E-09 3E-14 99.1 11.8 111 97-252 1-114 (156)
69 KOG2571 Chitin synthase/hyalur 98.9 2.2E-08 4.8E-13 115.9 15.5 166 195-402 426-596 (862)
70 cd02511 Beta4Glucosyltransfera 98.7 6.3E-08 1.4E-12 98.0 11.2 99 94-240 1-99 (229)
71 KOG2978 Dolichol-phosphate man 98.5 1.1E-06 2.4E-11 84.7 12.9 161 93-301 3-175 (238)
72 KOG2547 Ceramide glucosyltrans 98.5 1.1E-06 2.5E-11 92.4 11.8 222 89-400 81-313 (431)
73 COG0463 WcaA Glycosyltransfera 98.4 1.4E-06 2.9E-11 81.8 10.5 98 92-231 2-102 (291)
74 KOG2977 Glycosyltransferase [G 98.0 5E-05 1.1E-09 77.8 10.6 112 94-238 68-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.5 0.00097 2.1E-08 71.5 12.1 155 95-301 2-173 (334)
76 KOG3737 Predicted polypeptide 96.9 0.0013 2.7E-08 70.2 5.8 202 88-375 150-380 (603)
77 KOG3736 Polypeptide N-acetylga 96.2 0.0054 1.2E-07 69.8 4.9 216 89-391 138-380 (578)
78 cd00899 b4GalT Beta-4-Galactos 94.1 0.51 1.1E-05 47.8 11.3 141 194-406 49-199 (219)
79 PF02364 Glucan_synthase: 1,3- 93.7 2.2 4.7E-05 50.7 16.8 188 193-430 274-482 (817)
80 PF13704 Glyco_tranf_2_4: Glyc 93.5 0.19 4E-06 43.6 5.9 65 156-225 21-85 (97)
81 KOG3738 Predicted polypeptide 93.3 0.22 4.8E-06 53.8 7.1 109 90-238 121-230 (559)
82 PF13712 Glyco_tranf_2_5: Glyc 85.3 1.5 3.2E-05 44.3 5.5 49 193-249 40-89 (217)
83 PRK14503 mannosyl-3-phosphogly 81.2 9.4 0.0002 41.3 9.5 106 192-305 142-265 (393)
84 TIGR02460 osmo_MPGsynth mannos 80.4 10 0.00023 40.8 9.5 44 192-238 141-184 (381)
85 PF09488 Osmo_MPGsynth: Mannos 78.3 10 0.00022 41.1 8.6 44 192-238 141-184 (381)
86 PF03071 GNT-I: GNT-I family; 77.5 31 0.00067 38.6 12.5 160 90-301 90-268 (434)
87 COG4092 Predicted glycosyltran 74.1 40 0.00087 35.2 11.3 83 174-259 59-142 (346)
88 PF02709 Glyco_transf_7C: N-te 72.1 3.5 7.6E-05 34.8 2.8 22 355-376 46-67 (78)
89 cd02540 GT2_GlmU_N_bac N-termi 69.9 82 0.0018 31.1 12.7 55 177-239 62-117 (229)
90 PRK09382 ispDF bifunctional 2- 68.9 31 0.00067 38.0 10.0 41 195-239 83-123 (378)
91 PF05679 CHGN: Chondroitin N-a 68.6 40 0.00087 38.5 11.2 49 177-233 314-362 (499)
92 PRK14502 bifunctional mannosyl 67.6 29 0.00064 41.0 9.9 44 192-238 146-189 (694)
93 PF01644 Chitin_synth_1: Chiti 59.8 48 0.001 32.1 8.2 44 193-237 120-163 (163)
94 PF13896 Glyco_transf_49: Glyc 59.4 13 0.00027 40.0 4.7 40 209-249 125-164 (317)
95 TIGR03584 PseF pseudaminic aci 58.5 1.3E+02 0.0029 30.2 11.7 60 192-251 75-134 (222)
96 PF02434 Fringe: Fringe-like; 54.9 27 0.00059 36.1 6.1 27 210-237 85-111 (252)
97 TIGR03310 matur_ygfJ molybdenu 54.6 68 0.0015 30.6 8.6 54 178-239 63-117 (188)
98 TIGR01173 glmU UDP-N-acetylglu 50.8 1.5E+02 0.0032 32.8 11.6 72 157-239 46-118 (451)
99 cd04182 GT_2_like_f GT_2_like_ 49.3 98 0.0021 29.2 8.7 45 192-239 73-118 (186)
100 PF01762 Galactosyl_T: Galacto 48.6 54 0.0012 32.1 6.9 37 197-237 69-105 (195)
101 cd04181 NTP_transferase NTP_tr 45.8 1.4E+02 0.003 29.0 9.4 42 193-240 81-122 (217)
102 cd06915 NTP_transferase_WcbM_l 42.4 1.6E+02 0.0036 28.6 9.4 43 192-240 80-122 (223)
103 cd02509 GDP-M1P_Guanylyltransf 41.2 1.8E+02 0.0039 30.3 9.8 54 177-235 73-126 (274)
104 PLN03153 hypothetical protein; 38.8 2.1E+02 0.0046 32.8 10.2 30 209-240 208-237 (537)
105 COG1213 Predicted sugar nucleo 37.2 59 0.0013 33.4 5.1 79 156-252 48-131 (239)
106 cd02516 CDP-ME_synthetase CDP- 34.2 2.1E+02 0.0045 28.0 8.6 45 194-239 79-123 (218)
107 PLN02728 2-C-methyl-D-erythrit 33.0 1.7E+02 0.0036 30.3 7.9 42 195-238 103-144 (252)
108 PRK14359 glmU bifunctional N-a 31.6 2.4E+02 0.0051 31.1 9.4 69 157-234 47-115 (430)
109 TIGR02665 molyb_mobA molybdopt 30.8 1.9E+02 0.0041 27.6 7.5 43 192-239 72-115 (186)
110 PF00483 NTP_transferase: Nucl 29.7 1.3E+02 0.0029 30.0 6.5 78 157-241 50-130 (248)
111 PRK00317 mobA molybdopterin-gu 29.7 1.8E+02 0.0039 28.1 7.2 43 193-239 74-116 (193)
112 PF12804 NTP_transf_3: MobA-li 28.5 4.7E+02 0.01 24.0 10.3 65 178-252 59-124 (160)
113 PF01128 IspD: 2-C-methyl-D-er 28.4 2E+02 0.0044 29.1 7.4 73 156-239 47-119 (221)
114 PRK14357 glmU bifunctional N-a 28.0 3.6E+02 0.0078 29.8 10.1 53 179-240 64-117 (448)
115 cd06422 NTP_transferase_like_1 27.9 3E+02 0.0066 27.0 8.6 40 193-238 82-121 (221)
116 PRK02726 molybdopterin-guanine 27.8 3E+02 0.0066 27.0 8.5 54 178-239 67-120 (200)
117 PRK14352 glmU bifunctional N-a 25.3 7.9E+02 0.017 27.6 12.3 45 193-239 81-126 (482)
118 KOG0916 1,3-beta-glucan syntha 25.0 79 0.0017 40.1 4.2 199 193-441 1050-1258(1679)
119 PF04724 Glyco_transf_17: Glyc 24.4 1.4E+02 0.0031 32.6 5.8 35 197-233 165-199 (356)
120 PRK14355 glmU bifunctional N-a 24.4 5.3E+02 0.012 28.7 10.7 54 178-239 69-123 (459)
121 PRK14353 glmU bifunctional N-a 23.0 4.2E+02 0.0091 29.3 9.4 43 193-238 82-125 (446)
122 KOG3588 Chondroitin synthase 1 22.5 1.1E+03 0.024 26.2 13.4 162 157-375 262-430 (494)
123 cd02503 MobA MobA catalyzes th 22.2 3.5E+02 0.0075 25.5 7.6 42 192-237 68-109 (181)
124 PRK14354 glmU bifunctional N-a 21.2 6.6E+02 0.014 27.8 10.6 44 193-239 76-120 (458)
125 PF11316 Rhamno_transf: Putati 20.8 9.1E+02 0.02 24.7 10.9 75 157-239 61-141 (234)
No 1
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=8.3e-147 Score=1234.21 Aligned_cols=631 Identities=36% Similarity=0.683 Sum_probs=585.3
Q ss_pred CCcchhhhhhcccchHhHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCcch
Q 006553 2 EPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSK 81 (641)
Q Consensus 2 ~pl~~~~~~~~~~~~~~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~ 81 (641)
+||||+++ .+++.+||+++++++++|+++++||+++++.++. .|.|+++++||+||+|+|+++|+.||+|++|.+++
T Consensus 12 ~pL~~~~~--~~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~~-~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~~~ 88 (734)
T PLN02893 12 PPLHTCHP--MRRTIANRVFAVVYSCAILALLYHHVIALLHSTT-TLITLLLLLADIVLAFMWATTQAFRMCPVHRRVFI 88 (734)
T ss_pred CCceeeee--cCCchHHHHHHHHHHHHHHHHHHHHhcccccccc-hHHHHHHHHHHHHHHHHHHHccCccccccccccCH
Confidence 68999999 9998889999999999999999999999887753 68999999999999999999999999999999999
Q ss_pred hhhhhhc-cCCCCceEEEEecCCCCCCChhh-------------------------------------------------
Q 006553 82 ERLSLRY-EEKLPGVDILVCTADPILEPPAM------------------------------------------------- 111 (641)
Q Consensus 82 ~~l~~~~-~~~~P~VdV~Ipt~nE~~e~p~~------------------------------------------------- 111 (641)
|||+++. ++++|.|||||||+||.+|||++
T Consensus 89 ~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFC 168 (734)
T PLN02893 89 EHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFC 168 (734)
T ss_pred HHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccc
Confidence 9998654 35799999999999999999998
Q ss_pred -----------------------------hhhHHHHHHHHHHHhcCCCcHHHH---hhccCccccccccccCCCcceEEE
Q 006553 112 -----------------------------KQYEDMKIQIESATEKGSISEELR---SQHKGFLEWDHKVSKQNHQPIVQI 159 (641)
Q Consensus 112 -----------------------------~~y~~~~~~I~~a~~~~~~p~~~~---~~~~~~~~w~~~~~~~~h~~~I~V 159 (641)
+||||+|++|+++.+.++.|++.. ...++|..|+++.+++||+.+|+|
T Consensus 169 rk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV 248 (734)
T PLN02893 169 KKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQV 248 (734)
T ss_pred cccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeee
Confidence 999999999999998899997742 234668999999999999999999
Q ss_pred EecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553 160 IIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD 239 (641)
Q Consensus 160 ldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d 239 (641)
+.|++++. +..+.++|+++|++|||||+++||+||||||+++|+|+.+||||||+|+||||++|+|++++++||||+|
T Consensus 249 ~l~~~~~~--d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~D 326 (734)
T PLN02893 249 LLESGKDK--DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLD 326 (734)
T ss_pred eccCCCcc--chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcC
Confidence 99987664 4456779999999999999999999999999999999999999999999999999899999999999999
Q ss_pred ccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccc--cccccccccccc
Q 006553 240 EKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYS--YDCRNINEARNK 317 (641)
Q Consensus 240 ~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~~~~~~~~~~ 317 (641)
|+.++++|+||+||+|+|.++||+|++++++||+++++|+||++|++||||||+|||+||+|.... .++.++++.++.
T Consensus 327 p~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~ 406 (734)
T PLN02893 327 PSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHL 406 (734)
T ss_pred CCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccc
Confidence 988999999999999999999999999999999999999999999999999999999999986431 122222222211
Q ss_pred --cccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHH
Q 006553 318 --DKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQ 395 (641)
Q Consensus 318 --~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Q 395 (641)
.+...+++.++|++|++|+||++|.||+++||.|+|+|||++||++||++||||+||+|+++++.|++|+|+.++++|
T Consensus 407 ~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q 486 (734)
T PLN02893 407 VDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQ 486 (734)
T ss_pred cccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHH
Confidence 223456788899999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HhhhccchhhHHhhcccccccccCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHHHHHHHH
Q 006553 396 IKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVF 475 (641)
Q Consensus 396 r~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~~~~~~~ 475 (641)
|+||++|++|++++|+||+++|.++|++.||++|++.++||+.++|+++|+++|++||++|++++|+.+.+|+++|++++
T Consensus 487 ~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~ 566 (734)
T PLN02893 487 QKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLF 566 (734)
T ss_pred HHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHH
Confidence 99999999999999999999776889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhhhhhhhccccc
Q 006553 476 TTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSS 555 (641)
Q Consensus 476 ~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~ 555 (641)
+++++++++|++++|.++++|||+||+|+|.++++++++++++++|.+|+++.+|+||+|+.+++++++|++|.|+|+.+
T Consensus 567 ~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~ 646 (734)
T PLN02893 567 LGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVS 646 (734)
T ss_pred HHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999888
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccceehhhHHHHHHHH
Q 006553 556 SVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASL 635 (641)
Q Consensus 556 ~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~s~~~a~~ 635 (641)
+|+++|+++++++|++|+++|+++++.+ +.++++++|++|++|+|++++||++|+++|+|||++|++++++|+++|.+
T Consensus 647 spl~ip~ttl~llNl~a~v~Gi~~~~~~--~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~ 724 (734)
T PLN02893 647 SPMFLPLTTAAIINLVSFLWGIAQIFRQ--RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWA 724 (734)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHH
Confidence 9999999999999999999999998875 45889999999999999999999999999999999999999999999998
Q ss_pred hhcc
Q 006553 636 ACLM 639 (641)
Q Consensus 636 ~~~~ 639 (641)
+|++
T Consensus 725 ~~~~ 728 (734)
T PLN02893 725 LYLA 728 (734)
T ss_pred HHHH
Confidence 8864
No 2
>PLN02189 cellulose synthase
Probab=100.00 E-value=4.7e-145 Score=1240.29 Aligned_cols=624 Identities=33% Similarity=0.603 Sum_probs=571.0
Q ss_pred CCcchhhhhhcccchH--hHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCc
Q 006553 2 EPLFETKKELAKAKFF--HRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLP 79 (641)
Q Consensus 2 ~pl~~~~~~~~~~~~~--~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 79 (641)
+|||+|++ +++..+ ||+++++++++++++++||+++++.++ .|+|+++++||+||+|+|+++|+.||+|++|.+
T Consensus 237 ~pL~~~~~--~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~--~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R~t 312 (1040)
T PLN02189 237 QPLSRKVP--IASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDA--IGLWLTSIICEIWFAVSWILDQFPKWFPIDRET 312 (1040)
T ss_pred CCceEEEe--cCccccchHHHHHHHHHHHHHHHHHHHhcCcCccc--hHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence 68999999 998875 999999999999999999999987764 699999999999999999999999999999999
Q ss_pred chhhhhhhccC-----CCCceEEEEecCCCCCCChhh-------------------------------------------
Q 006553 80 SKERLSLRYEE-----KLPGVDILVCTADPILEPPAM------------------------------------------- 111 (641)
Q Consensus 80 ~~~~l~~~~~~-----~~P~VdV~Ipt~nE~~e~p~~------------------------------------------- 111 (641)
++|||+++.+. ++|.|||||||+||.+|||++
T Consensus 313 ~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~ 392 (1040)
T PLN02189 313 YLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFAR 392 (1040)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHH
Confidence 99999988632 399999999999999999999
Q ss_pred -------------------------------------------hhhHHHHHHHHHHH-hcCCCcHHHHhhccCccccccc
Q 006553 112 -------------------------------------------KQYEDMKIQIESAT-EKGSISEELRSQHKGFLEWDHK 147 (641)
Q Consensus 112 -------------------------------------------~~y~~~~~~I~~a~-~~~~~p~~~~~~~~~~~~w~~~ 147 (641)
++|||+|.+|+++. +++++|++.+.+ ++++.|+++
T Consensus 393 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m-~dGt~W~g~ 471 (1040)
T PLN02189 393 KWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIM-QDGTPWPGN 471 (1040)
T ss_pred hhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccee-ccCccCCCC
Confidence 99999999999987 668999876433 445889987
Q ss_pred cccCCCcceEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCch
Q 006553 148 VSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDA 227 (641)
Q Consensus 148 ~~~~~h~~~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p 227 (641)
+++||+++|+|+.|++++. +.++.++|+++||+|||||+++||+||||||+++|+|+.+||||||+|+||||++|+|
T Consensus 472 -~~~dHp~IiQVll~~~~~~--d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns 548 (1040)
T PLN02189 472 -NTRDHPGMIQVFLGHSGGH--DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNS 548 (1040)
T ss_pred -CCCCCHHHHHHHhcCCCCc--cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCch
Confidence 7899999999999987653 3457789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccc
Q 006553 228 DAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 228 ~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
++++++||||+||+.++++||||+||+|+|+++||+|+|++++||+++++|+||+|||+||||||+|||+||++..+.+.
T Consensus 549 ~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~ 628 (1040)
T PLN02189 549 KAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKG 628 (1040)
T ss_pred HHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754211
Q ss_pred ----------------------cccccc---cc-------------------------------------cccccchHHH
Q 006553 308 ----------------------CRNINE---AR-------------------------------------NKDKRSVDEL 325 (641)
Q Consensus 308 ----------------------~~~~~~---~~-------------------------------------~~~~~~~~~i 325 (641)
.+++++ .+ ........+.
T Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~ 708 (1040)
T PLN02189 629 PKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAAL 708 (1040)
T ss_pred cccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHHH
Confidence 000000 00 0001123456
Q ss_pred HHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhh
Q 006553 326 EKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQ 405 (641)
Q Consensus 326 g~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lq 405 (641)
.++|++|+||+||++|.||+++||.|||+|||+.||++||++||||+||+|++++|.|+||+|+.++++||+||++|++|
T Consensus 709 l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lq 788 (1040)
T PLN02189 709 LKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVE 788 (1040)
T ss_pred HHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHH
Confidence 67899999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHhhccccccccc--CCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHHHHHHHHHHHHHHHH
Q 006553 406 IFFSKYCPFIYGY--GKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSI 483 (641)
Q Consensus 406 i~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 483 (641)
|+++|+||+++|. ++|++.||++|+++++||++++|+++|+++|++||++|++++|.++.+++++|+.++++++++.+
T Consensus 789 I~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~l 868 (1040)
T PLN02189 789 IFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGI 868 (1040)
T ss_pred HhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999753 67999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhhhhhhhcccccchhHHHHH
Q 006553 484 YESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIA 563 (641)
Q Consensus 484 ~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~p~~ 563 (641)
+|++|+|.++++|||+||||+|.++++++|+++++++|+||+++++|+||+|..+++. .++.|+|+ ++++++|++
T Consensus 869 lE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~----~~~ly~f~-~s~l~iP~t 943 (1040)
T PLN02189 869 LELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDE----FGELYAFK-WTTLLIPPT 943 (1040)
T ss_pred HHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccccccc----cccceeec-ceeHhHHHH
Confidence 9999999999999999999999999999999999999999999999999999887643 25678996 899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccceehhhHHHHHHHHhhccC
Q 006553 564 TLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMP 640 (641)
Q Consensus 564 ~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~s~~~a~~~~~~~ 640 (641)
+++++|++|+++|+++.+.+++..|+.+++++++++|+|+++|||++||++|+ +|+|++|++||++++++++++.
T Consensus 944 tl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~ 1018 (1040)
T PLN02189 944 TLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFSLLW 1018 (1040)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHH
Confidence 99999999999999999887667899999999999999999999999999999 7899999999999999998763
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=4.5e-145 Score=1243.62 Aligned_cols=625 Identities=33% Similarity=0.603 Sum_probs=571.6
Q ss_pred CCcchhhhhhcccc--hHhHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCc
Q 006553 2 EPLFETKKELAKAK--FFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLP 79 (641)
Q Consensus 2 ~pl~~~~~~~~~~~--~~~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 79 (641)
+||++|++ +++. .+||+++++++++++++++||+++++.+ +.|+|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 255 ~pL~~~~~--i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~--~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t 330 (1079)
T PLN02638 255 QPLSRKVS--IPSSRINPYRMVIVLRLVILCIFLHYRITNPVRN--AYALWLISVICEIWFALSWILDQFPKWLPVNRET 330 (1079)
T ss_pred CCceEEEe--cCccccchHHHHHHHHHHHHHHHHHHHHhccCCc--cHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 68999999 8888 4799999999999999999999998765 5799999999999999999999999999999999
Q ss_pred chhhhhhhcc-----CCCCceEEEEecCCCCCCChhh-------------------------------------------
Q 006553 80 SKERLSLRYE-----EKLPGVDILVCTADPILEPPAM------------------------------------------- 111 (641)
Q Consensus 80 ~~~~l~~~~~-----~~~P~VdV~Ipt~nE~~e~p~~------------------------------------------- 111 (641)
++|||+++++ .++|.|||||||+||.+|||++
T Consensus 331 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~ 410 (1079)
T PLN02638 331 YLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAR 410 (1079)
T ss_pred CHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHH
Confidence 9999998863 3599999999999999999999
Q ss_pred -------------------------------------------hhhHHHHHHHHHHH-hcCCCcHHHHhhccCccccccc
Q 006553 112 -------------------------------------------KQYEDMKIQIESAT-EKGSISEELRSQHKGFLEWDHK 147 (641)
Q Consensus 112 -------------------------------------------~~y~~~~~~I~~a~-~~~~~p~~~~~~~~~~~~w~~~ 147 (641)
++|||+|.+|+++. +++++|++.+.+ ++++.|+++
T Consensus 411 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m-~dgt~W~g~ 489 (1079)
T PLN02638 411 KWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIM-QDGTPWPGN 489 (1079)
T ss_pred hhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccc-cCCccCCCC
Confidence 99999999999987 568999876433 456899987
Q ss_pred cccCCCcceEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCch
Q 006553 148 VSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDA 227 (641)
Q Consensus 148 ~~~~~h~~~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p 227 (641)
+++||+++|+|+.|++++. |.++.++|+++||+|||||+++||+||||||+++|+|+.+||||||+|+||||++|||
T Consensus 490 -~~~dHp~IiqVll~~~~~~--d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns 566 (1079)
T PLN02638 490 -NTRDHPGMIQVFLGHSGGL--DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNS 566 (1079)
T ss_pred -CCCCCHHHHHHHhcCCCcc--ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCch
Confidence 7899999999999987654 4567789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccc
Q 006553 228 DAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 228 ~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
++++++||||+||+.++++||||+||+|+|+++||+|+|++++||+++++|+||+|||+|+||||+|||+||++..+...
T Consensus 567 ~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~ 646 (1079)
T PLN02638 567 KALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIK 646 (1079)
T ss_pred HHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCccc
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999998733210
Q ss_pred ---ccc--------------------cc--c-----c-----------------------------------cc------
Q 006553 308 ---CRN--------------------IN--E-----A-----------------------------------RN------ 316 (641)
Q Consensus 308 ---~~~--------------------~~--~-----~-----------------------------------~~------ 316 (641)
+++ .+ + . +.
T Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~ 726 (1079)
T PLN02638 647 PKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAV 726 (1079)
T ss_pred ccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHH
Confidence 000 00 0 0 00
Q ss_pred ------------ccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCccccc
Q 006553 317 ------------KDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGL 384 (641)
Q Consensus 317 ------------~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~ 384 (641)
......+++.++|++|++|+||++|.||+++||.|||+|||+.||++||++||||+||+|++++|.|+
T Consensus 727 fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~Gl 806 (1079)
T PLN02638 727 FVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGS 806 (1079)
T ss_pred HHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCc
Confidence 00112345668999999999999999999999999999999999999999999999998888999999
Q ss_pred CCCCHHHHHHHHhhhccchhhHHhhcccccccc-cCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCcccccc
Q 006553 385 APVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYG-YGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKV 463 (641)
Q Consensus 385 aP~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~ 463 (641)
||+|+.++++||+||++|++||+++|++|+++| .++|++.||++|+++++||++++++++|+++|++||++|++++|++
T Consensus 807 AP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~v 886 (1079)
T PLN02638 807 APINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQI 886 (1079)
T ss_pred CCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 999999999999999999999999999999976 4789999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhh
Q 006553 464 TSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLK 543 (641)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~ 543 (641)
+++|+++|+++++++++++++|++|+|.++++|||+||||+|.++++++|+++++++|+||+++++|+||+|..+++..
T Consensus 887 s~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~- 965 (1079)
T PLN02638 887 SNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD- 965 (1079)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccccccc-
Confidence 9998889999999999999999999999999999999999999999999999999999999999999999998875432
Q ss_pred hhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccce
Q 006553 544 RYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPF 623 (641)
Q Consensus 544 ~~~~~~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~ 623 (641)
+++.|+|+ ++++++|.++++++|++|+++|+++.+.+++..|+.+++++|+++|+|+++|||++||++|+ +|+|+
T Consensus 966 --~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~--~r~P~ 1040 (1079)
T PLN02638 966 --FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPT 1040 (1079)
T ss_pred --ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCe
Confidence 36788996 89999999999999999999999999887667899999999999999999999999999999 78999
Q ss_pred ehhhHHHHHHHHhhccC
Q 006553 624 SVMLKSVVFASLACLMP 640 (641)
Q Consensus 624 ~v~~~s~~~a~~~~~~~ 640 (641)
+|++||++++++++++.
T Consensus 1041 ~v~v~s~ll~~~~~l~~ 1057 (1079)
T PLN02638 1041 IVVVWSILLASIFSLLW 1057 (1079)
T ss_pred eehHHHHHHHHHHHHHH
Confidence 99999999999998763
No 4
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.6e-144 Score=1234.40 Aligned_cols=624 Identities=31% Similarity=0.600 Sum_probs=569.2
Q ss_pred CCcchhhhhhcccchH--hHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCc
Q 006553 2 EPLFETKKELAKAKFF--HRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLP 79 (641)
Q Consensus 2 ~pl~~~~~~~~~~~~~--~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 79 (641)
+||++|++ +++..+ ||+++++++++++++++||+++++.+ +.|+|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 271 ~pL~~~~~--i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~--a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t 346 (1094)
T PLN02436 271 QPLSRKLP--IPSSKINPYRMIIILRLVILGLFFHYRILHPVND--AYGLWLTSVICEIWFAVSWILDQFPKWYPIERET 346 (1094)
T ss_pred CCceEEEe--cCccccchHHHHHHHHHHHHHHHHHHHhhccCcc--cHHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence 68999999 998875 99999999999999999999998777 4799999999999999999999999999999999
Q ss_pred chhhhhhhcc-----CCCCceEEEEecCCCCCCChhh-------------------------------------------
Q 006553 80 SKERLSLRYE-----EKLPGVDILVCTADPILEPPAM------------------------------------------- 111 (641)
Q Consensus 80 ~~~~l~~~~~-----~~~P~VdV~Ipt~nE~~e~p~~------------------------------------------- 111 (641)
++|||+++++ .++|.|||||||+||.+|||++
T Consensus 347 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk 426 (1094)
T PLN02436 347 YLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFAR 426 (1094)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 9999998863 3599999999999999999999
Q ss_pred -------------------------------------------hhhHHHHHHHHHHHhc-CCCcHHHHhhccCccccccc
Q 006553 112 -------------------------------------------KQYEDMKIQIESATEK-GSISEELRSQHKGFLEWDHK 147 (641)
Q Consensus 112 -------------------------------------------~~y~~~~~~I~~a~~~-~~~p~~~~~~~~~~~~w~~~ 147 (641)
++|||+|.+|+++.+. ++.|++.+.+. +++.|+++
T Consensus 427 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~-dgt~W~g~ 505 (1094)
T PLN02436 427 KWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQ-DGTPWPGN 505 (1094)
T ss_pred hhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhc-cCccCCCC
Confidence 9999999999999975 88998865444 45899986
Q ss_pred cccCCCcceEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCch
Q 006553 148 VSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDA 227 (641)
Q Consensus 148 ~~~~~h~~~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p 227 (641)
+++||+.+|+|+.|++++. +..+.++|+++||+|||||+++||+||||||+++|+|+.+||+|||+++|||||+|||
T Consensus 506 -~~~dHp~IIqVll~~~~~~--d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns 582 (1094)
T PLN02436 506 -NVRDHPGMIQVFLGHSGVR--DVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNS 582 (1094)
T ss_pred -CCCCCccceEEEecCCCCc--ccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCch
Confidence 7899999999999987653 4567789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccc
Q 006553 228 DAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 228 ~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
++++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.++|+||++||+|+||||+|||+||++..+...
T Consensus 583 ~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~ 662 (1094)
T PLN02436 583 KALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKK 662 (1094)
T ss_pred HHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754321
Q ss_pred ccccc-------------------------------------------c-c---------------------cc------
Q 006553 308 CRNIN-------------------------------------------E-A---------------------RN------ 316 (641)
Q Consensus 308 ~~~~~-------------------------------------------~-~---------------------~~------ 316 (641)
.+.++ . . +.
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~ 742 (1094)
T PLN02436 663 KKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPV 742 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHH
Confidence 11000 0 0 00
Q ss_pred ------------ccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCccccc
Q 006553 317 ------------KDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGL 384 (641)
Q Consensus 317 ------------~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~ 384 (641)
......+++.++|++|+||+||++|.||+++||.|||+|||+.||++||++||||+||+|++++|.|+
T Consensus 743 fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~Gl 822 (1094)
T PLN02436 743 FVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGS 822 (1094)
T ss_pred HHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCc
Confidence 00112345678999999999999999999999999999999999999999999999998888899999
Q ss_pred CCCCHHHHHHHHhhhccchhhHHhhcccccccc-cCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCcccccc
Q 006553 385 APVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYG-YGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKV 463 (641)
Q Consensus 385 aP~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~ 463 (641)
||+|+.+++.||+|||+|++||+++|++|+++| .++|++.||++|+++++||++++|+++|+++|++||++|++++|.+
T Consensus 823 AP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~v 902 (1094)
T PLN02436 823 APINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEI 902 (1094)
T ss_pred CCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCcc
Confidence 999999999999999999999999999999976 3589999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhh
Q 006553 464 TSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLK 543 (641)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~ 543 (641)
+.+|+++|+++++++++++++|++|+|.++++|||+||||+|.++++++|+++++++|+||+++++|+||+|..+++.
T Consensus 903 s~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~~-- 980 (1094)
T PLN02436 903 SNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGE-- 980 (1094)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccccccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999877531
Q ss_pred hhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccce
Q 006553 544 RYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPF 623 (641)
Q Consensus 544 ~~~~~~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~ 623 (641)
..+.|+|+ ++++++|+++++++|++|+++|+.+.+.+++..|+.+++++|+++|+|+++|||++||++| ++|+|+
T Consensus 981 --~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr--~~r~P~ 1055 (1094)
T PLN02436 981 --FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK--QDRMPT 1055 (1094)
T ss_pred --ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCe
Confidence 12345786 7899999999999999999999999988777789999999999999999999999999954 459999
Q ss_pred ehhhHHHHHHHHhhccC
Q 006553 624 SVMLKSVVFASLACLMP 640 (641)
Q Consensus 624 ~v~~~s~~~a~~~~~~~ 640 (641)
+|++||+++|++++++.
T Consensus 1056 ~v~v~s~lla~~~~l~~ 1072 (1094)
T PLN02436 1056 IILVWSILLASILTLLW 1072 (1094)
T ss_pred eehHHHHHHHHHHHHHH
Confidence 99999999999999863
No 5
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.8e-144 Score=1239.25 Aligned_cols=625 Identities=30% Similarity=0.569 Sum_probs=572.4
Q ss_pred CCcchhhhhhcccc--hHhHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCc
Q 006553 2 EPLFETKKELAKAK--FFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLP 79 (641)
Q Consensus 2 ~pl~~~~~~~~~~~--~~~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 79 (641)
+||++|++ +++. .+||+++++++++++++++||+++++.+ +.|+|+++++||+||+|+|+++|+.||+|++|.+
T Consensus 262 ~pL~~~~~--i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~--~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 337 (1085)
T PLN02400 262 LPMSRVVP--IPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKD--AYGLWLTSVICEIWFALSWLLDQFPKWYPINRET 337 (1085)
T ss_pred CCceEEEe--cCccccchHHHHHHHHHHHHHHHHHHHhhccCcc--cHHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence 68999999 8887 4799999999999999999999998777 4799999999999999999999999999999999
Q ss_pred chhhhhhhcc-----CCCCceEEEEecCCCCCCChhh-------------------------------------------
Q 006553 80 SKERLSLRYE-----EKLPGVDILVCTADPILEPPAM------------------------------------------- 111 (641)
Q Consensus 80 ~~~~l~~~~~-----~~~P~VdV~Ipt~nE~~e~p~~------------------------------------------- 111 (641)
++|||+++++ .++|.|||||||+||.+|||++
T Consensus 338 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~ 417 (1085)
T PLN02400 338 YLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAR 417 (1085)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 9999998763 3599999999999999999999
Q ss_pred -------------------------------------------hhhHHHHHHHHHHH-hcCCCcHHHHhhccCccccccc
Q 006553 112 -------------------------------------------KQYEDMKIQIESAT-EKGSISEELRSQHKGFLEWDHK 147 (641)
Q Consensus 112 -------------------------------------------~~y~~~~~~I~~a~-~~~~~p~~~~~~~~~~~~w~~~ 147 (641)
++|||+|.+|+++. ++++.|++.+.+ .+++.|+++
T Consensus 418 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m-~dgt~W~g~ 496 (1085)
T PLN02400 418 KWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTM-QDGTPWPGN 496 (1085)
T ss_pred hhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccc-ccCccCCCC
Confidence 99999999999997 568888775433 457999987
Q ss_pred cccCCCcceEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCch
Q 006553 148 VSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDA 227 (641)
Q Consensus 148 ~~~~~h~~~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p 227 (641)
+++||+.+|+|+.|++++. +..+.++|+++||+|||||+++||+||||||+++|+|+.+||+|||+++|||||+|||
T Consensus 497 -~~~dHp~iIqVll~~~~~~--d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns 573 (1085)
T PLN02400 497 -NPRDHPGMIQVFLGHSGGL--DTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNS 573 (1085)
T ss_pred -CCCCCchhhhhhhcCCCCc--ccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCc
Confidence 7899999999999987753 4466789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccc
Q 006553 228 DAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 228 ~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
++++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.++|+||++||+|+||||+|||+||+|.++...
T Consensus 574 ~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~ 653 (1085)
T PLN02400 574 KALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLT 653 (1085)
T ss_pred hhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998643210
Q ss_pred --c-cc----------------------cccc--c----------------------c----------------------
Q 006553 308 --C-RN----------------------INEA--R----------------------N---------------------- 316 (641)
Q Consensus 308 --~-~~----------------------~~~~--~----------------------~---------------------- 316 (641)
+ ++ ++.. + +
T Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi 733 (1085)
T PLN02400 654 EEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFI 733 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHH
Confidence 0 00 0000 0 0
Q ss_pred ----------ccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCC
Q 006553 317 ----------KDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAP 386 (641)
Q Consensus 317 ----------~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP 386 (641)
......+++.++|++|+||+||++|.||+|+||.|||+|||+.||++||++||||+||+|++++|.|+||
T Consensus 734 ~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP 813 (1085)
T PLN02400 734 AATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAP 813 (1085)
T ss_pred HHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCC
Confidence 0011235567899999999999999999999999999999999999999999999999988899999999
Q ss_pred CCHHHHHHHHhhhccchhhHHhhcccccccc-cCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccch
Q 006553 387 VTLDNSLVQIKRWSEGLFQIFFSKYCPFIYG-YGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTS 465 (641)
Q Consensus 387 ~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~ 465 (641)
+|+.++++||+||++|++||+++|+||+++| .++|++.||++|+++++||++++|+++|+++|++||++|++++|.+++
T Consensus 814 ~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~ 893 (1085)
T PLN02400 814 INLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISN 893 (1085)
T ss_pred CCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccch
Confidence 9999999999999999999999999999976 478999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhh
Q 006553 466 LWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRY 545 (641)
Q Consensus 466 ~~~~~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~ 545 (641)
+++++|+.+++++++++++|++|+|.++++|||+||||+|.++++++|+++++++|+||+++++|+||+|..+++..
T Consensus 894 ~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~~--- 970 (1085)
T PLN02400 894 YASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--- 970 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCccccccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998875431
Q ss_pred hhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccceeh
Q 006553 546 EQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSV 625 (641)
Q Consensus 546 ~~~~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v 625 (641)
.++.|+|+ ++++++|+++++++|++|+++|+++.+.+++..|+.+++++|+++|+|+++|||++||++|+ +|+|++|
T Consensus 971 ~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~--~r~P~~v 1047 (1085)
T PLN02400 971 FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ--NRTPTIV 1047 (1085)
T ss_pred ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCceeH
Confidence 36788996 89999999999999999999999999887777899999999999999999999999999988 7899999
Q ss_pred hhHHHHHHHHhhccC
Q 006553 626 MLKSVVFASLACLMP 640 (641)
Q Consensus 626 ~~~s~~~a~~~~~~~ 640 (641)
++||+++|++++++.
T Consensus 1048 ~~~s~lla~~~~l~~ 1062 (1085)
T PLN02400 1048 IVWSILLASIFSLLW 1062 (1085)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998863
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.5e-143 Score=1222.57 Aligned_cols=623 Identities=32% Similarity=0.586 Sum_probs=567.6
Q ss_pred CCcchhhhhhcccchH--hHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCc
Q 006553 2 EPLFETKKELAKAKFF--HRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLP 79 (641)
Q Consensus 2 ~pl~~~~~~~~~~~~~--~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 79 (641)
+||++|++ +++..+ ||+++++++++++++++||+++++.++ .|+|+++++||+||+|+|+++|+.||+|++|.+
T Consensus 158 ~pL~~~~~--i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~--~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 233 (977)
T PLN02195 158 EPLSRVIP--IPRNKLTPYRAVIIMRLIILGLFFHYRITNPVDSA--FGLWLTSVICEIWFAFSWVLDQFPKWSPINRET 233 (977)
T ss_pred CCceEEEe--cCcccchhHHHHHHHHHHHHHHHHHHHhcCccccc--hHHHHHHHHHHHHHHHHHHHhcccccccccceE
Confidence 68999999 998874 999999999999999999999987774 589999999999999999999999999999999
Q ss_pred chhhhhhhcc-----CCCCceEEEEecCCCCCCChhh-------------------------------------------
Q 006553 80 SKERLSLRYE-----EKLPGVDILVCTADPILEPPAM------------------------------------------- 111 (641)
Q Consensus 80 ~~~~l~~~~~-----~~~P~VdV~Ipt~nE~~e~p~~------------------------------------------- 111 (641)
++|||+++.+ .++|.|||||||+||.+|||++
T Consensus 234 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~ 313 (977)
T PLN02195 234 YIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFAR 313 (977)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 9999998763 3599999999999999999999
Q ss_pred -------------------------------------------hhhHHHHHHHHHHHhc-CCCcHHHHhhccCccccccc
Q 006553 112 -------------------------------------------KQYEDMKIQIESATEK-GSISEELRSQHKGFLEWDHK 147 (641)
Q Consensus 112 -------------------------------------------~~y~~~~~~I~~a~~~-~~~p~~~~~~~~~~~~w~~~ 147 (641)
++|||+|.+|+++.+. ++.|++.+. ..+++.|+++
T Consensus 314 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~-m~d~t~W~g~ 392 (977)
T PLN02195 314 KWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWT-MQDGTPWPGN 392 (977)
T ss_pred hhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccc-ccCCccCCCC
Confidence 9999999999999865 788877532 3567999986
Q ss_pred cccCCCcceEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCch
Q 006553 148 VSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDA 227 (641)
Q Consensus 148 ~~~~~h~~~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p 227 (641)
+++||+.+|+|+.|++++. +.++.++|+++||+|||||+++||+||||||+++|+|+.+||+|||+++||||++|+|
T Consensus 393 -~~~dHp~IIqVll~~~~~~--d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s 469 (977)
T PLN02195 393 -NTRDHPGMIQVFLGETGAR--DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNS 469 (977)
T ss_pred -CCCCCcchhhhhccCCCCc--ccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcH
Confidence 7899999999998876653 4567789999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccc
Q 006553 228 DAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 228 ~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
++++++||||+||+.++++|+||+||+|+|.+++|+|++++++||+++++|+||+|||+|+||||+|||+||++..+...
T Consensus 470 ~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~ 549 (977)
T PLN02195 470 KAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSL 549 (977)
T ss_pred HHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998642110
Q ss_pred ------------------cccccc--------------c-----------c---------------c-------------
Q 006553 308 ------------------CRNINE--------------A-----------R---------------N------------- 316 (641)
Q Consensus 308 ------------------~~~~~~--------------~-----------~---------------~------------- 316 (641)
.+.++. . . .
T Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~ 629 (977)
T PLN02195 550 PRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLM 629 (977)
T ss_pred ccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHH
Confidence 000000 0 0 0
Q ss_pred -----ccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHH
Q 006553 317 -----KDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDN 391 (641)
Q Consensus 317 -----~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~ 391 (641)
.......+..++|++|+||+||++|.||+++||.|||+|||+.||++||++||||+||+|++++|.|+||+|+.+
T Consensus 630 ~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~ 709 (977)
T PLN02195 630 ENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSD 709 (977)
T ss_pred HhcCCCCCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHH
Confidence 000112345678999999999999999999999999999999999999999999999998888999999999999
Q ss_pred HHHHHhhhccchhhHHhhcccccccc--cCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHH
Q 006553 392 SLVQIKRWSEGLFQIFFSKYCPFIYG--YGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFI 469 (641)
Q Consensus 392 ~~~Qr~RWa~G~lqi~~~~~~p~~~~--~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~ 469 (641)
+++||+||++|++||+++|+||+++| .++|++.||++|+++++||++++|+++|+++|++||++|++++|++++++++
T Consensus 710 ~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~ 789 (977)
T PLN02195 710 RLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASM 789 (977)
T ss_pred HHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHH
Confidence 99999999999999999999999965 3689999999999999999999999999999999999999999999888889
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchh-hhhhhhhh
Q 006553 470 PFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTED-VLKRYEQE 548 (641)
Q Consensus 470 ~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~-~~~~~~~~ 548 (641)
+|+++++++++++++|++|+|.++++|||+||||+|.++++++|+++++++|++|+++++|+||+|..+++ .++
T Consensus 790 ~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~~~~----- 864 (977)
T PLN02195 790 LFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTEFGE----- 864 (977)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccchhc-----
Confidence 99999999999999999999999999999999999999999999999999999999999999999988753 334
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccceehhhH
Q 006553 549 IMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLK 628 (641)
Q Consensus 549 ~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~ 628 (641)
.|+|+ +|++++|.++++++|++|+++|+++.+.+++..|+.+++++++++|+|+++|||++||++|+ +|+|++|++|
T Consensus 865 ~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~ 941 (977)
T PLN02195 865 LYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPTIVVLW 941 (977)
T ss_pred ceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHH
Confidence 45785 89999999999999999999999999887777899999999999999999999999999999 7899999999
Q ss_pred HHHHHHHhhccC
Q 006553 629 SVVFASLACLMP 640 (641)
Q Consensus 629 s~~~a~~~~~~~ 640 (641)
|++++++++++.
T Consensus 942 s~ll~~~~~l~~ 953 (977)
T PLN02195 942 SVLLASVFSLVW 953 (977)
T ss_pred HHHHHHHHHHHH
Confidence 999999998763
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.5e-141 Score=1211.97 Aligned_cols=626 Identities=32% Similarity=0.602 Sum_probs=565.7
Q ss_pred CCcchhhhhhcccchH--hHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCc
Q 006553 2 EPLFETKKELAKAKFF--HRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLP 79 (641)
Q Consensus 2 ~pl~~~~~~~~~~~~~--~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 79 (641)
+||++|++ +++..+ ||+++++++++++++++||+++.+.+ +.|+|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 193 ~pL~~~~~--i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~--a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 268 (1044)
T PLN02915 193 QPLWRKVP--IPSSKINPYRIVIVLRLVILCFFFRFRILTPAYD--AYPLWLISVICEIWFALSWILDQFPKWFPINRET 268 (1044)
T ss_pred CCceEEEe--cCcccchhHHHHHHHHHHHHHHHHHHHhcCcCCC--chHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 68999999 998865 99999999999999999999985444 5799999999999999999999999999999999
Q ss_pred chhhhhhhcc-----CCCCceEEEEecCCCCCCChhh-------------------------------------------
Q 006553 80 SKERLSLRYE-----EKLPGVDILVCTADPILEPPAM------------------------------------------- 111 (641)
Q Consensus 80 ~~~~l~~~~~-----~~~P~VdV~Ipt~nE~~e~p~~------------------------------------------- 111 (641)
++|||+++++ .++|.|||||||+||.+|||++
T Consensus 269 ~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk 348 (1044)
T PLN02915 269 YLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFAR 348 (1044)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHH
Confidence 9999997753 2499999999999999999999
Q ss_pred -------------------------------------------hhhHHHHHHHHHHHhc-CCCcHHHHhhccCccccccc
Q 006553 112 -------------------------------------------KQYEDMKIQIESATEK-GSISEELRSQHKGFLEWDHK 147 (641)
Q Consensus 112 -------------------------------------------~~y~~~~~~I~~a~~~-~~~p~~~~~~~~~~~~w~~~ 147 (641)
++|||+|.||+++.+. ++.|++.+.+ .+++.|+++
T Consensus 349 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m-~dgt~W~g~ 427 (1044)
T PLN02915 349 RWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVM-QDGTPWPGN 427 (1044)
T ss_pred hhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccc-cCCccCCCC
Confidence 9999999999999865 7888775333 457999987
Q ss_pred cccCCCcceEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCch
Q 006553 148 VSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDA 227 (641)
Q Consensus 148 ~~~~~h~~~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p 227 (641)
.+ +||+.+|+|+.|++++. +..+.++|+++||+|||||+++||+||||||+++|+|+.+||+|||+|+|||||+|||
T Consensus 428 ~~-~dHp~IIqVll~~~~~~--d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns 504 (1044)
T PLN02915 428 NT-RDHPGMIQVYLGSEGAL--DVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNS 504 (1044)
T ss_pred CC-CCCccceEEeecCCCCc--ccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcc
Confidence 65 89999999999987653 4567789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccc
Q 006553 228 DAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 228 ~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
++++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.++|+||++||+|+||||+|||+||+|..+...
T Consensus 505 ~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~ 584 (1044)
T PLN02915 505 KAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVS 584 (1044)
T ss_pred hhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998754310
Q ss_pred ---------cccccc--------------------------------------------------------------c--
Q 006553 308 ---------CRNINE--------------------------------------------------------------A-- 314 (641)
Q Consensus 308 ---------~~~~~~--------------------------------------------------------------~-- 314 (641)
+.++|. .
T Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1044)
T PLN02915 585 EKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGL 664 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 000000 0
Q ss_pred ---cc---------------------------------ccccchHHHHHhhhhhhccccccCCCccccccccCCCccchH
Q 006553 315 ---RN---------------------------------KDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDV 358 (641)
Q Consensus 315 ---~~---------------------------------~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~ 358 (641)
++ ......+++.++|++|+||+||++|.||+++||.|||+|||+
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv 744 (1044)
T PLN02915 665 EGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDI 744 (1044)
T ss_pred ccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHH
Confidence 00 000123456678999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhhHHhhcccccccc-cCCCCcchhhhhhhhhhhhh
Q 006553 359 VTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYG-YGKIKLGARMGYCNYLLWAP 437 (641)
Q Consensus 359 ~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~ 437 (641)
.||++||++||||+||+|++++|.|++|+|+.++++||+||++|++||++++++|++++ .++|++.||++|+++++||+
T Consensus 745 ~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~ 824 (1044)
T PLN02915 745 LTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPF 824 (1044)
T ss_pred HHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999888999999999999999999999999999999999999965 37899999999999999999
Q ss_pred hHHHHHHHHHhhhHHHhhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHH
Q 006553 438 LSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFAD 517 (641)
Q Consensus 438 ~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~ 517 (641)
.++++++|+++|++||++|++++|.++..+.+.|+++++++++++++|++|+|.++++|||+||+|+|.++++++|++++
T Consensus 825 ~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~ 904 (1044)
T PLN02915 825 TSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQ 904 (1044)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987665555666778889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCeeeCCCCcchhhhhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 006553 518 VIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIIL 597 (641)
Q Consensus 518 ~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~ 597 (641)
+++|+||+++++|+||+|+.+++..++ ++.|+|+ ++++++|+++++++|++|+++|+++.+.++.+.|+.+++++++
T Consensus 905 ~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~ 981 (1044)
T PLN02915 905 GLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFF 981 (1044)
T ss_pred HHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 999999999999999999987554332 4778886 8999999999999999999999999987667789999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccceehhhHHHHHHHHhhccC
Q 006553 598 CGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMP 640 (641)
Q Consensus 598 ~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~s~~~a~~~~~~~ 640 (641)
++|+|++++||++||++|+ +|+|++|++||++++++++++.
T Consensus 982 ~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~ 1022 (1044)
T PLN02915 982 AFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVW 1022 (1044)
T ss_pred HHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHH
Confidence 9999999999999999998 6899999999999999998763
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=2.3e-141 Score=1211.55 Aligned_cols=627 Identities=29% Similarity=0.514 Sum_probs=555.8
Q ss_pred CCcchhhhhhcccchH--hHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCc
Q 006553 2 EPLFETKKELAKAKFF--HRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLP 79 (641)
Q Consensus 2 ~pl~~~~~~~~~~~~~--~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 79 (641)
+||++|++ +++..+ ||+++++++++++++++||+++.+.+ +.|+|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 268 ~pL~~~~~--i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~--~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t 343 (1135)
T PLN02248 268 RPLTRKVK--ISAAILSPYRLLILIRLVVLGLFLTWRVRNPNED--AMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRAT 343 (1135)
T ss_pred CCceeeee--cCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCc--chHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 68999999 998875 99999999999999999999985544 4799999999999999999999999999999999
Q ss_pred chhhhhhhcc----------CCCCceEEEEecCCCCCCChhh--------------------------------------
Q 006553 80 SKERLSLRYE----------EKLPGVDILVCTADPILEPPAM-------------------------------------- 111 (641)
Q Consensus 80 ~~~~l~~~~~----------~~~P~VdV~Ipt~nE~~e~p~~-------------------------------------- 111 (641)
++|||+++.+ .++|.|||||||+||.+|||++
T Consensus 344 ~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~EA 423 (1135)
T PLN02248 344 DLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAEA 423 (1135)
T ss_pred CHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHHH
Confidence 9999998864 3699999999999999999999
Q ss_pred ------------------------------------------------hhhHHHHHHHHHHHhcCCCc-------HHHHh
Q 006553 112 ------------------------------------------------KQYEDMKIQIESATEKGSIS-------EELRS 136 (641)
Q Consensus 112 ------------------------------------------------~~y~~~~~~I~~a~~~~~~p-------~~~~~ 136 (641)
+||||+|.+|+++.+.++.+ ++...
T Consensus 424 a~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~~ 503 (1135)
T PLN02248 424 ASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKA 503 (1135)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHHh
Confidence 99999999999997644333 11110
Q ss_pred -----------------------hccCccccccc-------cccCCCcceEEEEecCCChh----------HHhh--hcC
Q 006553 137 -----------------------QHKGFLEWDHK-------VSKQNHQPIVQIIIDGRDTN----------AVDN--EGC 174 (641)
Q Consensus 137 -----------------------~~~~~~~w~~~-------~~~~~h~~~I~VldD~~~~~----------~~~~--~~~ 174 (641)
+.|| +.|||+ .+++||+.+|+|+.|+.+.+ ..|. .+.
T Consensus 504 ~~~~~~~~~~~~~e~~~~~~~~wm~dg-t~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 504 KKKQRESGGGDPSEPLKVPKATWMADG-THWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhcccccccccccccceeeccC-CcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 2222 456654 68899999999998864411 1121 234
Q ss_pred CCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcc
Q 006553 175 QLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQC 254 (641)
Q Consensus 175 ~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~ 254 (641)
++|+++||+|||||+++||+||||||+++|+|+.+||||||+|+|||||+|+|++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 7999999999999999999999999999999999999999999999999999999999999999996 889999999999
Q ss_pred cccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccc---------------ccccc-------
Q 006553 255 FDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD---------------CRNIN------- 312 (641)
Q Consensus 255 f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~---------------~~~~~------- 312 (641)
|+|+++||+|+|++++||+++++|+||+|||+||||||+|||+||++..+... ++.++
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999998643210 00000
Q ss_pred ----------c----ccc--------------------------------------ccccchHHHHHhhhhhhccccccC
Q 006553 313 ----------E----ARN--------------------------------------KDKRSVDELEKASKVLASCSYEKD 340 (641)
Q Consensus 313 ----------~----~~~--------------------------------------~~~~~~~~ig~~a~~v~~c~ye~~ 340 (641)
. .++ .+....++..++|++|++|+||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 0 000 000112345678999999999999
Q ss_pred CCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhhHHhhcccccccccCC
Q 006553 341 TQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGK 420 (641)
Q Consensus 341 t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~ 420 (641)
|.||+++||.|+|+|||+.||++||++||||+||++++++|.|++|+|+.++++||+||++|++||+++|++|++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999998864 68
Q ss_pred CCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHHHHH-HHHHHHHHHHHHHHHHcCCcchhhhhh
Q 006553 421 IKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFA-YVFTTKTVYSIYESMSCGYTLKSWWNF 499 (641)
Q Consensus 421 l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~G~s~~~ww~~ 499 (641)
|++.||++|+++++||+.++++++|+++|++||++|++++|+.+ ++|++++ +++++++++.++|.+|+|.++++|||+
T Consensus 901 Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~~-~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrn 979 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLN-VTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRN 979 (1135)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccc-HHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhh
Confidence 99999999999999999999999999999999999999999864 4555554 556788999999999999999999999
Q ss_pred hhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 006553 500 QRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLIN 579 (641)
Q Consensus 500 q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~ 579 (641)
||||+|.++++++++++++++|++|+++++|+||+|+.+++..++| ++.|+|+ ++++++|+++++++|++|+++|++|
T Consensus 980 Qq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R 1057 (1135)
T PLN02248 980 EQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSR 1057 (1135)
T ss_pred hheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887766677 6889996 8999999999999999999999999
Q ss_pred HhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccceehhhHHHHHHHHhhccC
Q 006553 580 TIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMP 640 (641)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~s~~~a~~~~~~~ 640 (641)
++++..+.|+.+++++++++|+++++|||++||++| ++|+|++|.+||++++++++++.
T Consensus 1058 ~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~ 1116 (1135)
T PLN02248 1058 TIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLW 1116 (1135)
T ss_pred HHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHh
Confidence 988766788999999999999999999999999999 57899999999999999998764
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=3.4e-140 Score=1174.09 Aligned_cols=613 Identities=32% Similarity=0.589 Sum_probs=546.8
Q ss_pred CCcchhhhhhcccchHhHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCcch
Q 006553 2 EPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSK 81 (641)
Q Consensus 2 ~pl~~~~~~~~~~~~~~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~ 81 (641)
+|||||++ +|++ ++|++++++++++++|++||+++.+.++ +.|+.+++||+|++++|+++|+.+|+|++|.++|
T Consensus 9 ~pL~~~~~--~~~~-~~r~~~~~vl~~~~~~l~~R~~~~~~~~---~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~~p 82 (756)
T PLN02190 9 PPLCERIS--HKSY-FLRAVDLTILGLLFSLLLYRILHMSEND---TVWLVAFLCESCFSFVWLLITCIKWSPAEYKPYP 82 (756)
T ss_pred CCceeeee--ccch-hHHHHHHHHHHHHHHHHHHHHhCCCccc---HHHHHHHHHHHHHHHHHHHhccceeeecCCCCCc
Confidence 68999999 8888 5999999999999999999999866653 4789999999999999999999999999999999
Q ss_pred hhhhhhccCCCCceEEEEecCCCCCCChhh--------------------------------------------------
Q 006553 82 ERLSLRYEEKLPGVDILVCTADPILEPPAM-------------------------------------------------- 111 (641)
Q Consensus 82 ~~l~~~~~~~~P~VdV~Ipt~nE~~e~p~~-------------------------------------------------- 111 (641)
|+|+++.+ ++|.||||||||||.+|||++
T Consensus 83 ~~l~~r~~-~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCr 161 (756)
T PLN02190 83 DRLDERVH-DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCK 161 (756)
T ss_pred HHHHHhhc-cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhccccc
Confidence 99999875 699999999999999999998
Q ss_pred ---------------------------------hhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEE
Q 006553 112 ---------------------------------KQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQ 158 (641)
Q Consensus 112 ---------------------------------~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~ 158 (641)
+||||+|++|+++.. .+.+.+. .+.++.|+ +.+++||+.+|+
T Consensus 162 K~~IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~-~~~~~~~---~~~~~~~~-~~~~~dH~~iiq 236 (756)
T PLN02190 162 KYNVRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDATG-DSHWLDA---EDDFEAFS-NTKPNDHSTIVK 236 (756)
T ss_pred ccCCCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhcc-CCCCccc---CCcccccC-CCCCCCCccceE
Confidence 999999999999863 3332211 12245554 478999999999
Q ss_pred EEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006553 159 IIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM 238 (641)
Q Consensus 159 VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~ 238 (641)
|+.|++++. ..+.++|+++||+|||||+++||+||||||+++|+|+.+||+|||+|+|||||+|||++++++||||+
T Consensus 237 Vll~~~~~~---~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~l 313 (756)
T PLN02190 237 VVWENKGGV---GDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFL 313 (756)
T ss_pred EEecCCCCc---cccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhc
Confidence 999985542 34668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC-ceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCccccccc---------
Q 006553 239 DEKRG-HEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDC--------- 308 (641)
Q Consensus 239 d~~~~-~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~--------- 308 (641)
|++.+ +++||||+||+|+ |+|+|+++++|++.++|+||+|||+|+||||+|||+||+|.++....
T Consensus 314 d~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~ 388 (756)
T PLN02190 314 QKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVA 388 (756)
T ss_pred CCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccc
Confidence 98644 4899999999997 67999999999999999999999999999999999999996432110
Q ss_pred ----ccccc-cccc------------------c-ccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHH
Q 006553 309 ----RNINE-ARNK------------------D-KRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTI 364 (641)
Q Consensus 309 ----~~~~~-~~~~------------------~-~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l 364 (641)
.+++. .+++ . ...+.++.++|++|+||+||++|.||+|+||.|+|+|||+.||++|
T Consensus 389 ~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~m 468 (756)
T PLN02190 389 TREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGI 468 (756)
T ss_pred cccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHH
Confidence 00000 0000 0 1134567789999999999999999999999999999999999999
Q ss_pred HHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhhHHhhcccccccc-cCCCCcchhhhhhhhhhhhhhHHHHH
Q 006553 365 QCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYG-YGKIKLGARMGYCNYLLWAPLSLPTL 443 (641)
Q Consensus 365 ~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l 443 (641)
|++||||+||+|++++|.|.+|+++.+.++||+||++|++|++++|+||++++ .++|++.||++|++..+ |++++|++
T Consensus 469 h~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l 547 (756)
T PLN02190 469 HSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPEL 547 (756)
T ss_pred HccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHH
Confidence 99999999999989999999999999999999999999999999999999864 57899999999999988 99999999
Q ss_pred HHHHhhhHHHhhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHh
Q 006553 444 FYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQL 523 (641)
Q Consensus 444 ~~~~~P~l~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l 523 (641)
+|+++|++||++|++++|+. +|+++++.+++++++++++|++|+|.++++||||||||+|.++++|++|++++++|++
T Consensus 548 ~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~l 625 (756)
T PLN02190 548 IYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLL 625 (756)
T ss_pred HHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHh
Confidence 99999999999999999965 5778888888899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeeeCCCCcc-------------hhhhhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc---cccc
Q 006553 524 GLSQTAFAITAKVVT-------------EDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFL---EFGA 587 (641)
Q Consensus 524 ~~~~~~F~VT~K~~~-------------~~~~~~~~~~~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~---~~~~ 587 (641)
|+++++|+||+|..+ +++.++|++|.|+|+ +||+++|.++++++|++|+++|+++++.+ ..+.
T Consensus 626 g~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~ 704 (756)
T PLN02190 626 GISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGG 704 (756)
T ss_pred ccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcc
Confidence 999999999999754 445688999999997 89999999999999999999998877542 2345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccceehhhHHHHHHHHhhccC
Q 006553 588 LQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMP 640 (641)
Q Consensus 588 ~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~s~~~a~~~~~~~ 640 (641)
++++ +|+++|+|+|++++||+|||+ |||||+||.|++++|++++.+|+++.
T Consensus 705 ~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 705 GSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred cccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 6655 999999999999999999998 99999999999999999999999875
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2.5e-128 Score=1076.48 Aligned_cols=520 Identities=41% Similarity=0.761 Sum_probs=475.0
Q ss_pred hhhHHHHHHHHHHHhc-CCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCC
Q 006553 112 KQYEDMKIQIESATEK-GSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPEC 190 (641)
Q Consensus 112 ~~y~~~~~~I~~a~~~-~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~ 190 (641)
++||+++.+|+++.+. ++.|++.+.+.++ +.|++ .+++||+.+|+|+.|+++++ |.+|.++|+++||+|||||++
T Consensus 104 ~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~-~~w~~-~~~~dH~~iiqv~~~~~~~~--~~~g~~lP~lvYvsREKrp~~ 179 (720)
T PF03552_consen 104 REYEEFKVRIEALVAKIQKVPEEGWTMQDG-TPWPG-NTRRDHPGIIQVLLDNPGGK--DVDGNELPMLVYVSREKRPGY 179 (720)
T ss_pred HHHHHHHHHHHHHhhhhhcccccceeccCC-CcCCC-CCCcCChhheEeeccCCCCc--ccccCcCCeEEEEeccCCCCC
Confidence 8999999999998754 5789887767766 89996 58999999999999987764 567888999999999999999
Q ss_pred CCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhh
Q 006553 191 PHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLV 270 (641)
Q Consensus 191 ~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~ 270 (641)
+||+||||||+++|+|+.+||+|||+++|||||+|||+.++++||||+||+.++++||||+||+|+|.++||+|+++.++
T Consensus 180 ~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~ 259 (720)
T PF03552_consen 180 PHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRV 259 (720)
T ss_pred CchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCcccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCceecccceeEehhhhcCccccccccccc--------------------------------------
Q 006553 271 ENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNIN-------------------------------------- 312 (641)
Q Consensus 271 ~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~-------------------------------------- 312 (641)
+|+++++|+||++||+|+||||+|||+||++.++....++..
T Consensus 260 ~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 339 (720)
T PF03552_consen 260 FFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFA 339 (720)
T ss_pred eeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhcccccccccccccc
Confidence 999999999999999999999999999999986542110000
Q ss_pred ----ccc-----c--------------------------------ccccchHHHHHhhhhhhccccccCCCccccccccC
Q 006553 313 ----EAR-----N--------------------------------KDKRSVDELEKASKVLASCSYEKDTQWGREMGLVY 351 (641)
Q Consensus 313 ----~~~-----~--------------------------------~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~ 351 (641)
+.+ . .++....++.++|++|+||+||++|.||+|+||.|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiY 419 (720)
T PF03552_consen 340 LEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIY 419 (720)
T ss_pred ccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCccccCCcccccceEE
Confidence 000 0 01112244557999999999999999999999999
Q ss_pred CCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhhHHhhcccccccc-cCCCCcchhhhhh
Q 006553 352 GYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYG-YGKIKLGARMGYC 430 (641)
Q Consensus 352 ~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~ 430 (641)
||+|||+.||++||++||||+||+|+++||.|.||+|+.+.+.|++||+.|++||+++|+||++++ .++|++.||++|+
T Consensus 420 GSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~ 499 (720)
T PF03552_consen 420 GSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYL 499 (720)
T ss_pred EecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999987 5789999999999
Q ss_pred hhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHH
Q 006553 431 NYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATA 510 (641)
Q Consensus 431 ~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~ 510 (641)
++++|+++|+|.++|+++|++||++|++++|+.+++|+++|+++++++++++++|++|+|.++++|||+||||+|.++++
T Consensus 500 ~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa 579 (720)
T PF03552_consen 500 NYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSA 579 (720)
T ss_pred HHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhhhhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccccchHH
Q 006553 511 FFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQN 590 (641)
Q Consensus 511 ~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~ 590 (641)
|+||++++++|++|+++++|+||+|+.++++.+.++ .|+|+ ++++++|+++++++|++|+++|+++.+.++..+|+.
T Consensus 580 ~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~e--ly~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~ 656 (720)
T PF03552_consen 580 HLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYAE--LYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGP 656 (720)
T ss_pred HHHHHHHHHHHHHcCCccceeecccccccccccccc--ccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhH
Confidence 999999999999999999999999998855545444 45553 478999999999999999999999998877778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCccceehhhHHHHHHHHhhccC
Q 006553 591 LISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMP 640 (641)
Q Consensus 591 ~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~s~~~a~~~~~~~ 640 (641)
+++++|+++|+|+++|||+||+++|++ |+|++|++||+++|+++|++.
T Consensus 657 l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llw 704 (720)
T PF03552_consen 657 LLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLW 704 (720)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHh
Confidence 999999999999999999999999986 699999999999999999863
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=6.5e-72 Score=646.82 Aligned_cols=485 Identities=20% Similarity=0.255 Sum_probs=390.9
Q ss_pred hHHHH-HHHHHHHHHHHHHHhc-cCCCCCc-hhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCcchhhhhhhccCCCCc
Q 006553 18 HRVYA-ATVFVGICLILNYRLV-NFPRGGG-RRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPG 94 (641)
Q Consensus 18 ~R~~~-~~~~~~~~~~l~~R~~-~l~~~~~-~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~~P~ 94 (641)
.|++. ++.+++.+.|++||++ +||.++. +.+++++++++|+++.+..+++.+....|..|++.+ ++. ..+.+|+
T Consensus 185 ~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~--~~~-~~~~~P~ 261 (852)
T PRK11498 185 SALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP--LPK-DMSLWPT 261 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CCc-ccCCCCc
Confidence 34443 4445556789999998 5888876 778899999999999988888877777788776433 222 2456899
Q ss_pred eEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcC
Q 006553 95 VDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGC 174 (641)
Q Consensus 95 VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~ 174 (641)
|||+||||||+.++ ++++|.++++ ++||++ ..+|+|+|||++|++.+.+.
T Consensus 262 VsViIPtYNE~~~v--------v~~tI~a~l~-~dYP~~--------------------k~EViVVDDgS~D~t~~la~- 311 (852)
T PRK11498 262 VDIFVPTYNEDLNV--------VKNTIYASLG-IDWPKD--------------------KLNIWILDDGGREEFRQFAQ- 311 (852)
T ss_pred EEEEEecCCCcHHH--------HHHHHHHHHh-ccCCCC--------------------ceEEEEEeCCCChHHHHHHH-
Confidence 99999999999875 7889998875 788842 13699999999999765433
Q ss_pred CCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh-cccCCceEEEEecCc
Q 006553 175 QLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM-DEKRGHEIAFVQHPQ 253 (641)
Q Consensus 175 ~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq 253 (641)
..+++|++|+++ .|+||||+|+|+++ ++||||+++|||+++ +||+|++++++|. || ++|+||+||
T Consensus 312 -~~~v~yI~R~~n----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip-~pdfL~~~V~~f~~dP----~VglVQtp~ 377 (852)
T PRK11498 312 -EVGVKYIARPTH----EHAKAGNINNALKY----AKGEFVAIFDCDHVP-TRSFLQMTMGWFLKDK----KLAMMQTPH 377 (852)
T ss_pred -HCCcEEEEeCCC----CcchHHHHHHHHHh----CCCCEEEEECCCCCC-ChHHHHHHHHHHHhCC----CeEEEEcce
Confidence 247999999763 68999999999997 699999999999999 8999999999875 54 899999999
Q ss_pred ccccCCc---cc----ccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHH
Q 006553 254 CFDIISE---ND----LYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELE 326 (641)
Q Consensus 254 ~f~n~~~---~d----~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig 326 (641)
.|+|.+. |. ...++.+.||+.++.|++.+++.++|||++++||++++ ++|
T Consensus 378 ~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe-----------------------eVG 434 (852)
T PRK11498 378 HFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD-----------------------EIG 434 (852)
T ss_pred eccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH-----------------------Hhc
Confidence 9988653 11 13456678999999999999999999999999999998 486
Q ss_pred HhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhhH
Q 006553 327 KASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQI 406 (641)
Q Consensus 327 ~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi 406 (641)
||++++++||+++++++|++||+++|+++ +...|++|+|++++++||.||++|++|+
T Consensus 435 ---------------------Gfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWarG~lQi 491 (852)
T PRK11498 435 ---------------------GIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWARGMVQI 491 (852)
T ss_pred ---------------------CCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986 3457999999999999999999999999
Q ss_pred HhhcccccccccCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHHHHHHHHHHHHHHHHHHH
Q 006553 407 FFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYES 486 (641)
Q Consensus 407 ~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 486 (641)
++. ++|++ .+++++.||++|++++++++.++++++|+++|++|+++|+.++.+. +..++++++..+....+...
T Consensus 492 ~r~-~~pl~--~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a~---~~~i~~y~lP~~~~~~l~~~ 565 (852)
T PRK11498 492 FRL-DNPLT--GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYAP---ALMIALFVLPHMIHASLTNS 565 (852)
T ss_pred HHH-hChhc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeCC---hHHHHHHHHHHHHHHHHHHH
Confidence 864 68987 5789999999999999999999999999999999999999888543 22233333333334445455
Q ss_pred HHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhhhhhhhcccccchhHHHHHHHH
Q 006553 487 MSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLA 566 (641)
Q Consensus 487 ~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~~l~~p~~~l~ 566 (641)
..+|..+..||++ +++++..++....++..++++++.+|+||||++..+ ++.|+|+ +..|+++++
T Consensus 566 ~~~g~~r~~~wse-----iye~v~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~------~~~~~~~----~~~P~~~L~ 630 (852)
T PRK11498 566 RIQGKYRHSFWSE-----IYETVLAWYIAPPTTVALFNPHKGKFNVTAKGGLVE------EEYVDWV----ISRPYIFLV 630 (852)
T ss_pred HhcCcchHhHHHH-----HHHHHHHHHHHHHHHHHHcCccCCCcccCCCCcccc------ccceehH----HHHHHHHHH
Confidence 5567777788876 556565666666777779999999999999987643 3456664 556778899
Q ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 006553 567 MLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRR 616 (641)
Q Consensus 567 ~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~ 616 (641)
++|++|+++|++++..+.......+.++++|+.|+++++...+.....|+
T Consensus 631 ~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~ 680 (852)
T PRK11498 631 LLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESK 680 (852)
T ss_pred HHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999998775434445778999999999988877765554443
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.1e-69 Score=630.13 Aligned_cols=486 Identities=22% Similarity=0.285 Sum_probs=392.4
Q ss_pred hHHHHHHHHHH-HHHHHHHHhc-cCCCCCc-hhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCcchhhhhhhccCCCCc
Q 006553 18 HRVYAATVFVG-ICLILNYRLV-NFPRGGG-RRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPG 94 (641)
Q Consensus 18 ~R~~~~~~~~~-~~~~l~~R~~-~l~~~~~-~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~~P~ 94 (641)
-|++.++..++ .+.|++||++ +||.++. ...++++++++|+++.+..+++.+..++|.+|++.+.. ..++.+|+
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~P~ 132 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP---LDPEEWPT 132 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC---CCcccCCe
Confidence 47666554444 5679999998 5888776 66789999999999999888888888888887654321 12467899
Q ss_pred eEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH-----
Q 006553 95 VDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV----- 169 (641)
Q Consensus 95 VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~----- 169 (641)
|||+||||||+.++ ++++++++++ ++||++ ..+|+|+|||++|++.
T Consensus 133 VsViIP~yNE~~~i--------v~~tl~s~~~-~dYP~~--------------------~~eIiVvDDgStD~t~~~~~~ 183 (713)
T TIGR03030 133 VDVFIPTYNEDLEI--------VATTVLAAKN-MDYPAD--------------------KFRVWILDDGGTDQKRNDPDP 183 (713)
T ss_pred eEEEEcCCCCCHHH--------HHHHHHHHHh-CCCCcc--------------------ceEEEEEECcCCccccccchh
Confidence 99999999999875 6778888775 788842 1359999999876431
Q ss_pred ---------h---hhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006553 170 ---------D---NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFF 237 (641)
Q Consensus 170 ---------~---~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f 237 (641)
+ +.. +..+++|++|+++ .|+||||||+|+++ ++||||+++|||+++ +||+|++++++|
T Consensus 184 ~~~~~~~~~~~~~~l~-~~~~v~yi~r~~n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~-~pd~L~~~v~~f 253 (713)
T TIGR03030 184 EQAEAAQRREELKEFC-RKLGVNYITRPRN----VHAKAGNINNALKH----TDGELILIFDADHVP-TRDFLQRTVGWF 253 (713)
T ss_pred hhhhhhhhHHHHHHHH-HHcCcEEEECCCC----CCCChHHHHHHHHh----cCCCEEEEECCCCCc-ChhHHHHHHHHH
Confidence 1 111 1247999999874 68999999999997 689999999999999 799999999999
Q ss_pred h-cccCCceEEEEecCcccccCCc---c----cccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccc
Q 006553 238 M-DEKRGHEIAFVQHPQCFDIISE---N----DLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCR 309 (641)
Q Consensus 238 ~-d~~~~~~va~VQ~pq~f~n~~~---~----d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~ 309 (641)
. || ++|+||+||.|+|.+. | +...+++..||+.++.|++.++++++||||+++||++++
T Consensus 254 ~~dp----~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~--------- 320 (713)
T TIGR03030 254 VEDP----KLFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD--------- 320 (713)
T ss_pred HhCC----CEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH---------
Confidence 6 44 8999999999988653 2 123455678899999999999999999999999999998
Q ss_pred cccccccccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCH
Q 006553 310 NINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTL 389 (641)
Q Consensus 310 ~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl 389 (641)
++| ||++++++||++++++||++||+++|+++ +.+.|++|+|+
T Consensus 321 --------------~iG---------------------Gf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl 363 (713)
T TIGR03030 321 --------------EIG---------------------GIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETL 363 (713)
T ss_pred --------------HcC---------------------CCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCH
Confidence 476 99999999999999999999999999985 45689999999
Q ss_pred HHHHHHHhhhccchhhHHhhcccccccccCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHH
Q 006553 390 DNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFI 469 (641)
Q Consensus 390 ~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~ 469 (641)
+++++||.||++|++|+++.+ +|++ .+++++.||++|+++++||+.++++++|+++|++++++|++++++....++
T Consensus 364 ~~~~~Qr~RWa~G~~qi~~~~-~pl~--~~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~~~- 439 (713)
T TIGR03030 364 SGHIGQRIRWAQGMMQIFRLD-NPLL--KRGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVASALEIL- 439 (713)
T ss_pred HHHHHHHHHHhcChHHHHhhh-Cccc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeCCHHHHH-
Confidence 999999999999999998754 8887 578999999999999999999999999999999999999999986432222
Q ss_pred HHHHHHHHHHHHHHHH-HHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhhhhh
Q 006553 470 PFAYVFTTKTVYSIYE-SMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQE 548 (641)
Q Consensus 470 ~~~~~~~~~~~~~l~~-~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~ 548 (641)
+++ +.+++.+++. ....|..+..||++ ++++...++.+.+++.+++++++.+|+|||||+..+..
T Consensus 440 --~~~-lp~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~------ 505 (713)
T TIGR03030 440 --AYA-LPHMLHSLLTNSYLFGRVRWPFWSE-----VYETVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED------ 505 (713)
T ss_pred --HHH-HHHHHHHHHHHHHHcCCeecchHHH-----HHHHHHHHHHHHHHHHHHhCcCCCCceecCCCcccccc------
Confidence 222 2333344433 34467777789986 66777778888899999999999999999998764321
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 006553 549 IMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKG 619 (641)
Q Consensus 549 ~~~f~~~~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~ 619 (641)
..++++.|+++++++|++|+++|++++.. +....+.++++++|+.|+++++...+.....|+.++
T Consensus 506 -----~~~~~~~p~~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR 570 (713)
T TIGR03030 506 -----YFSPLSRPYLILFALILAGLAFGLYRIYG-YPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRR 570 (713)
T ss_pred -----ccchHHHHHHHHHHHHHHHHHHHHHHHhc-CccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 12478999999999999999999999864 334445778999999999998888776666655544
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=7.7e-39 Score=367.08 Aligned_cols=352 Identities=13% Similarity=0.111 Sum_probs=241.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHhcc-CCCCCc---hhHH---HHHHHHHHHHHHHHHHHHhHhhceeccCCcc-hhhhhhhc
Q 006553 17 FHRVYAATVFVGICLILNYRLVN-FPRGGG---RRRA---WIGIFMAEFFLSLFWIISQSVRWNVKHNLPS-KERLSLRY 88 (641)
Q Consensus 17 ~~R~~~~~~~~~~~~~l~~R~~~-l~~~~~---~~~~---~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~-~~~l~~~~ 88 (641)
..|++.+...++...+..|+.+. ++.+|. ...+ ..+++..+.+.+..-+++.+......++... .+......
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~~~~~~~~~~~~~~~~~ 119 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLRGRDKYSISASAAGDPP 119 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCCcccccCCC
Confidence 56777777777888899999885 666653 2221 2334455655554445544333221111110 00001112
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhc---CCCcHHHHhhccCccccccccccCCCcceEEEEecCCC
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEK---GSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRD 165 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~---~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~ 165 (641)
.+..|+|+|+||+|||+.+. +..+++++.++ ++|+ +..+|+|+||+++
T Consensus 120 ~~~~~~VaVliP~yNEd~~~--------v~~~L~a~~~Sl~~~~~~---------------------~~~e~~vLdD~~d 170 (691)
T PRK05454 120 PPPEARTAILMPIYNEDPAR--------VFAGLRAMYESLAATGHG---------------------AHFDFFILSDTRD 170 (691)
T ss_pred CCCCCceEEEEeCCCCChHH--------HHHHHHHHHHHHHhcCCC---------------------CCEEEEEEECCCC
Confidence 35678999999999998763 44455544432 2232 1135899999999
Q ss_pred hhHHh-------hhcCC---CCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHH
Q 006553 166 TNAVD-------NEGCQ---LPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALC 235 (641)
Q Consensus 166 ~~~~~-------~~~~~---~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~ 235 (641)
|++.. ++.++ .+++.|.+|++| .|+||||+|.+++.++ .++|||+++|||+++ ++|+++++++
T Consensus 171 ~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m-~~d~L~~lv~ 243 (691)
T PRK05454 171 PDIAAAEEAAWLELRAELGGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLM-SGDTLVRLVR 243 (691)
T ss_pred hhHHHHHHHHHHHHHHhcCCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCC-CHHHHHHHHH
Confidence 88521 11122 357999888764 6789999999999753 577999999999999 7999999999
Q ss_pred Hhh-cccCCceEEEEecCcccccCCcccccccch----hhHHHHHHHhhhhcC--CceecccceeEehhhhcCccccccc
Q 006553 236 FFM-DEKRGHEIAFVQHPQCFDIISENDLYGHYN----LVENQVELAGLGGYD--AAMYCGTACFHRRDSLSGAKYSYDC 308 (641)
Q Consensus 236 ~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~----~~~~~~~~~g~d~~~--~~~~~Gtg~~~RR~aL~~~~~~~~~ 308 (641)
+|. || ++|+||+++.+.|.+ ..++..+ .++......|++.|+ ...|+|+|+++||+++.+
T Consensus 244 ~m~~dP----~vGlVQt~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~------- 310 (691)
T PRK05454 244 LMEANP----RAGLIQTLPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE------- 310 (691)
T ss_pred HHhhCc----CEEEEeCCccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH-------
Confidence 996 55 899999999988764 2333322 222334567887765 346899999999999984
Q ss_pred ccccccccccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCC
Q 006553 309 RNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVT 388 (641)
Q Consensus 309 ~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~t 388 (641)
+++ ... -=| .+||..++++||++++.+|+++||+++|+++ ...+++++|+|
T Consensus 311 ----------------~~g---------lp~--L~g-~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~t 361 (691)
T PRK05454 311 ----------------HCG---------LPP--LPG-RGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPN 361 (691)
T ss_pred ----------------hcC---------Ccc--ccc-cCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCC
Confidence 321 100 001 2488889999999999999999999999975 24468999999
Q ss_pred HHHHHHHHhhhccchhhHHhhcccccccccCCCCcchhhhhhhhhhhhhhHHH-HHHHHHhhhHH
Q 006553 389 LDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLP-TLFYVIVPPVC 452 (641)
Q Consensus 389 l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~-~l~~~~~P~l~ 452 (641)
+.++++||.||++|++|++.. +. .+++++.+|++|++..+.++.+.. .+++++.|++.
T Consensus 362 l~~~~~qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 362 LLDELKRDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred HHHHHHHHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998742 22 478999999999887776665443 33344444444
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.4e-35 Score=328.51 Aligned_cols=229 Identities=19% Similarity=0.172 Sum_probs=183.8
Q ss_pred CCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV 169 (641)
Q Consensus 90 ~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~ 169 (641)
+..|.|+|+||+|||+.+ ++++|+++++ ++||+ .+|.|+||+++|++.
T Consensus 72 ~~~p~vsViIP~yNE~~~---------i~~~l~sll~-q~yp~----------------------~eIivVdDgs~D~t~ 119 (444)
T PRK14583 72 KGHPLVSILVPCFNEGLN---------ARETIHAALA-QTYTN----------------------IEVIAINDGSSDDTA 119 (444)
T ss_pred CCCCcEEEEEEeCCCHHH---------HHHHHHHHHc-CCCCC----------------------eEEEEEECCCCccHH
Confidence 357999999999999976 6888998775 56761 259999999999875
Q ss_pred hh---hcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceE
Q 006553 170 DN---EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEI 246 (641)
Q Consensus 170 ~~---~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~v 246 (641)
+. ...+.|+++++.+++ +++||+|+|.|++. +++|+++++|||+++ +||++++++..|.+ ++++
T Consensus 120 ~~~~~~~~~~~~v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~-~~d~L~~lv~~~~~---~~~~ 186 (444)
T PRK14583 120 QVLDALLAEDPRLRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALL-DKNAVPYLVAPLIA---NPRT 186 (444)
T ss_pred HHHHHHHHhCCCEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCc-CHHHHHHHHHHHHh---CCCe
Confidence 43 334567888887754 35899999999996 689999999999999 89999999998863 2489
Q ss_pred EEEecCcccccCCcccccccch----hhHHHHHHHhhhhcCCce-ecccceeEehhhhcCcccccccccccccccccccc
Q 006553 247 AFVQHPQCFDIISENDLYGHYN----LVENQVELAGLGGYDAAM-YCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRS 321 (641)
Q Consensus 247 a~VQ~pq~f~n~~~~d~~~~~~----~~~~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~ 321 (641)
+.||+.+...|.+ ...+..+ ...++...++.+..+..+ .+|+++++||++++
T Consensus 187 g~v~g~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~--------------------- 243 (444)
T PRK14583 187 GAVTGNPRIRTRS--TLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALA--------------------- 243 (444)
T ss_pred EEEEccceecCCC--cchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHH---------------------
Confidence 9999987765432 2333322 233344556666666554 47999999999998
Q ss_pred hHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhcc
Q 006553 322 VDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSE 401 (641)
Q Consensus 322 ~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~ 401 (641)
++| ||+.++++||++++++++.+||++.|++. +.+++++|+|++++++||.||++
T Consensus 244 --~vG---------------------g~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~~~Qr~RW~~ 298 (444)
T PRK14583 244 --DVG---------------------YWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGLWKQRLRWAQ 298 (444)
T ss_pred --HcC---------------------CCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHHHHHHHHHhC
Confidence 465 89999999999999999999999999974 56789999999999999999999
Q ss_pred chhhHHhhcc
Q 006553 402 GLFQIFFSKY 411 (641)
Q Consensus 402 G~lqi~~~~~ 411 (641)
|.+|+++++.
T Consensus 299 G~~~~~~~~~ 308 (444)
T PRK14583 299 GGAEVFLKNM 308 (444)
T ss_pred cHHHHHHHHH
Confidence 9999987643
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=7.4e-37 Score=314.52 Aligned_cols=233 Identities=17% Similarity=0.153 Sum_probs=178.0
Q ss_pred eEEEEecCCCCCCChhhhhhHHHHHHHHHHHhc---CCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH--
Q 006553 95 VDILVCTADPILEPPAMKQYEDMKIQIESATEK---GSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV-- 169 (641)
Q Consensus 95 VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~---~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~-- 169 (641)
|+|+||+|||+.++ +.+++.+..+. ++|+ ++ .+|+|+||+++++..
T Consensus 1 ~SIliP~~ne~~~~--------l~~~l~~~~~~~~~~~~~-------~~--------------~eI~vldD~~d~~~~~~ 51 (254)
T cd04191 1 TAIVMPVYNEDPAR--------VFAGLRAMYESLAKTGLA-------DH--------------FDFFILSDTRDPDIWLA 51 (254)
T ss_pred CEEEEeCCCCCHHH--------HHHHHHHHHHHHHhcCCc-------Cc--------------eEEEEECCCCChHHHHH
Confidence 78999999999875 66677765541 2321 11 368999999997631
Q ss_pred hh-----hc---CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh-cc
Q 006553 170 DN-----EG---CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM-DE 240 (641)
Q Consensus 170 ~~-----~~---~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~-d~ 240 (641)
+. +. .+.++++|++|+++ .|.||||||++++.. .+++|||+++|||+++ +||+|++++.+|. ||
T Consensus 52 ~~~~~~~l~~~~~~~~~v~~~~r~~~----~g~Kag~l~~~~~~~--~~~~~~i~~~DaD~~~-~p~~l~~~v~~~~~~~ 124 (254)
T cd04191 52 EEAAWLDLCEELGAQGRIYYRRRREN----TGRKAGNIADFCRRW--GSRYDYMVVLDADSLM-SGDTIVRLVRRMEANP 124 (254)
T ss_pred HHHHHHHHHHHhCCCCcEEEEEcCCC----CCccHHHHHHHHHHh--CCCCCEEEEEeCCCCC-CHHHHHHHHHHHHhCC
Confidence 11 11 12578999999885 579999999999853 2588999999999999 7999999999997 65
Q ss_pred cCCceEEEEecCcccccCCcccccccc----hhhHHHHHHHhhhhcCC--ceecccceeEehhhhcCccccccccccccc
Q 006553 241 KRGHEIAFVQHPQCFDIISENDLYGHY----NLVENQVELAGLGGYDA--AMYCGTACFHRRDSLSGAKYSYDCRNINEA 314 (641)
Q Consensus 241 ~~~~~va~VQ~pq~f~n~~~~d~~~~~----~~~~~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~ 314 (641)
++|+||+|+.+.|.+. .+... ...+...++.|++.|++ .+|+|+++++||++|++...
T Consensus 125 ----~vg~vq~~~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~---------- 188 (254)
T cd04191 125 ----RAGIIQTAPKLIGAET--LFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCA---------- 188 (254)
T ss_pred ----CEEEEeCCceeECCCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcC----------
Confidence 8999999999987652 22222 23344566788877643 57899999999999984110
Q ss_pred ccccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHH
Q 006553 315 RNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLV 394 (641)
Q Consensus 315 ~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~ 394 (641)
.++||| .+||..++++||+++|++++.+||+++|.+.. .+.++++|+|++++++
T Consensus 189 -------~~~i~g------------------~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~~~ 242 (254)
T cd04191 189 -------LPVLPG------------------RPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDFLK 242 (254)
T ss_pred -------CccccC------------------CCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHHHH
Confidence 001331 24888899999999999999999999999752 2347899999999999
Q ss_pred HHhhhccchhh
Q 006553 395 QIKRWSEGLFQ 405 (641)
Q Consensus 395 Qr~RWa~G~lq 405 (641)
||.||++|++|
T Consensus 243 qr~RW~~G~~q 253 (254)
T cd04191 243 RDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHhhcCc
Confidence 99999999987
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.5e-35 Score=321.89 Aligned_cols=229 Identities=24% Similarity=0.327 Sum_probs=181.7
Q ss_pred CCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHh-
Q 006553 92 LPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD- 170 (641)
Q Consensus 92 ~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~- 170 (641)
.|.|||+||+|||+.|. ++++++++.+ ++||+ .+|+|+||+++|++.+
T Consensus 53 ~p~vsviiP~ynE~~~~--------~~~~l~s~~~-~dyp~----------------------~evivv~d~~~d~~~~~ 101 (439)
T COG1215 53 LPKVSVIIPAYNEEPEV--------LEETLESLLS-QDYPR----------------------YEVIVVDDGSTDETYEI 101 (439)
T ss_pred CCceEEEEecCCCchhh--------HHHHHHHHHh-CCCCC----------------------ceEEEECCCCChhHHHH
Confidence 59999999999999875 8889998876 67762 2599999999988643
Q ss_pred --hhcCCC-CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEE
Q 006553 171 --NEGCQL-PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 171 --~~~~~~-p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
+.+.+. |+++.+..++ ++++|++|+|.+++. +++|+|+++|||+++ +||+|+++++.|.|++ .+|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~-~~d~l~~~~~~f~~~~---~~~ 169 (439)
T COG1215 102 LEELGAEYGPNFRVIYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVP-EPDALRELVSPFEDPP---VGA 169 (439)
T ss_pred HHHHHhhcCcceEEEeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCC-ChhHHHHHHhhhcCCC---eeE
Confidence 333344 4666653212 368999999999997 579999999999999 8999999999999874 457
Q ss_pred EEecCcccccCCcccccccchhhHHHHH-----HHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccch
Q 006553 248 FVQHPQCFDIISENDLYGHYNLVENQVE-----LAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSV 322 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d~~~~~~~~~~~~~-----~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~ 322 (641)
.+|.|+.+.+.+.....+..+...|... +.+.+.....+++|+++++||++|++
T Consensus 170 v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~--------------------- 228 (439)
T COG1215 170 VVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEE--------------------- 228 (439)
T ss_pred EeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHH---------------------
Confidence 8999988765532222333344444322 22333334567899999999999994
Q ss_pred HHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccc
Q 006553 323 DELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEG 402 (641)
Q Consensus 323 ~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 402 (641)
+| ||..+++|||.++++++|.+|||+.|+++ +.+++++|+|+.++++||.||++|
T Consensus 229 --~g---------------------~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g 283 (439)
T COG1215 229 --VG---------------------GWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQRLRWARG 283 (439)
T ss_pred --hC---------------------CCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHHHHHHcc
Confidence 65 89999999999999999999999999985 557999999999999999999999
Q ss_pred hhhHHhh
Q 006553 403 LFQIFFS 409 (641)
Q Consensus 403 ~lqi~~~ 409 (641)
.+|++..
T Consensus 284 ~~~~~~~ 290 (439)
T COG1215 284 GLQVLLL 290 (439)
T ss_pred cceeeeh
Confidence 9999864
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=2.3e-33 Score=308.10 Aligned_cols=229 Identities=21% Similarity=0.222 Sum_probs=180.9
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhH
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNA 168 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~ 168 (641)
.+..|.|+|+||+|||+.. ++++++++.+ ++||+ .+|.|+||+++|++
T Consensus 50 ~~~~p~vsViIp~yne~~~---------i~~~l~sl~~-q~yp~----------------------~eiiVvdD~s~d~t 97 (420)
T PRK11204 50 LKEYPGVSILVPCYNEGEN---------VEETISHLLA-LRYPN----------------------YEVIAINDGSSDNT 97 (420)
T ss_pred cCCCCCEEEEEecCCCHHH---------HHHHHHHHHh-CCCCC----------------------eEEEEEECCCCccH
Confidence 3467999999999999855 7888998775 56662 25899999999886
Q ss_pred Hhh---hcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCce
Q 006553 169 VDN---EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHE 245 (641)
Q Consensus 169 ~~~---~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~ 245 (641)
.+. ...+.|+++++.+++ ++|||+|+|.|++. +++|+++++|||.++ +||+|++++..|.+ +++
T Consensus 98 ~~~l~~~~~~~~~v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~-~~d~L~~l~~~~~~---~~~ 164 (420)
T PRK11204 98 GEILDRLAAQIPRLRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALL-DPDAAAYMVEHFLH---NPR 164 (420)
T ss_pred HHHHHHHHHhCCcEEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCC-ChhHHHHHHHHHHh---CCC
Confidence 543 334568899998764 35899999999997 689999999999999 89999999999952 238
Q ss_pred EEEEecCcccccCCcccccccchhhHH----HHHHHhhhhcCCce-ecccceeEehhhhcCccccccccccccccccccc
Q 006553 246 IAFVQHPQCFDIISENDLYGHYNLVEN----QVELAGLGGYDAAM-YCGTACFHRRDSLSGAKYSYDCRNINEARNKDKR 320 (641)
Q Consensus 246 va~VQ~pq~f~n~~~~d~~~~~~~~~~----~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~ 320 (641)
++.||+.+...|.+ ...+..+...| +...++....+... .+|+++++||++++
T Consensus 165 v~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~-------------------- 222 (420)
T PRK11204 165 VGAVTGNPRIRNRS--TLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALH-------------------- 222 (420)
T ss_pred eEEEECCceeccch--hHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHH--------------------
Confidence 99999987765532 22222222222 22333434444443 47899999999998
Q ss_pred chHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhc
Q 006553 321 SVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWS 400 (641)
Q Consensus 321 ~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa 400 (641)
++| ||+++.++||++++++++++||++.|+++ +.++++.|+|++++++||.||+
T Consensus 223 ---~vg---------------------g~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~~~Qr~RW~ 276 (420)
T PRK11204 223 ---EVG---------------------YWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGLWKQRLRWA 276 (420)
T ss_pred ---HhC---------------------CCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHHHHHHHHHh
Confidence 365 89999999999999999999999999975 5679999999999999999999
Q ss_pred cchhhHHhhc
Q 006553 401 EGLFQIFFSK 410 (641)
Q Consensus 401 ~G~lqi~~~~ 410 (641)
+|.+|.++++
T Consensus 277 ~G~~~~l~~~ 286 (420)
T PRK11204 277 QGGAEVLLKN 286 (420)
T ss_pred cCHHHHHHHH
Confidence 9999998764
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=1.7e-32 Score=303.48 Aligned_cols=280 Identities=16% Similarity=0.105 Sum_probs=198.8
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhH
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNA 168 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~ 168 (641)
.+..|.|+|+||+|||+.. ++++|+++.+ ++||++ ..+|+|+||+++|++
T Consensus 45 ~~~~P~vsVIIP~yNe~~~---------l~~~l~sl~~-q~yp~~--------------------~~eIiVVDd~StD~T 94 (439)
T TIGR03111 45 IGKLPDITIIIPVYNSEDT---------LFNCIESIYN-QTYPIE--------------------LIDIILANNQSTDDS 94 (439)
T ss_pred cCCCCCEEEEEEeCCChHH---------HHHHHHHHHh-cCCCCC--------------------CeEEEEEECCCChhH
Confidence 3568999999999999954 7888888775 677731 124899999999987
Q ss_pred Hhh---hcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCce
Q 006553 169 VDN---EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHE 245 (641)
Q Consensus 169 ~~~---~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~ 245 (641)
.+. ...+.|++..+..++ ++|||+|+|.|++. +++|||+++|||+++ +||++++++..|.+ +++
T Consensus 95 ~~il~~~~~~~~~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~-~~d~L~~l~~~f~~---~~~ 161 (439)
T TIGR03111 95 FQVFCRAQNEFPGLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKL-HKDAIKNMVTRFEN---NPD 161 (439)
T ss_pred HHHHHHHHHhCCCeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCc-ChHHHHHHHHHHHh---CCC
Confidence 543 233456665544332 37999999999997 689999999999999 89999999999973 236
Q ss_pred EEEEecCcccccC--Cccc----ccccchhhHHHHH---HH--hhh-hcCCce-ecccceeEehhhhcCccccccccccc
Q 006553 246 IAFVQHPQCFDII--SEND----LYGHYNLVENQVE---LA--GLG-GYDAAM-YCGTACFHRRDSLSGAKYSYDCRNIN 312 (641)
Q Consensus 246 va~VQ~pq~f~n~--~~~d----~~~~~~~~~~~~~---~~--g~d-~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~ 312 (641)
++.|++.+.-... +.+. .+... ..+++.. .. ... ..+..+ ++|+++++||+++.+
T Consensus 162 v~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~----------- 229 (439)
T TIGR03111 162 IHAMTGVILTDKELIEKTKGRFLKLIRR-CEYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILK----------- 229 (439)
T ss_pred eEEEEeEEecCchhhhhhcchhhhHhHH-hHHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHH-----------
Confidence 7777654432110 0000 00000 0112111 11 111 223333 478888999999983
Q ss_pred ccccccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHH-cCCeEEEeCCCCCcccccCCCCHHH
Q 006553 313 EARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQC-RGWKSMHYNPERPAFLGLAPVTLDN 391 (641)
Q Consensus 313 ~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~-~Gwrs~y~~~~~~a~~g~aP~tl~~ 391 (641)
+| ||+.++++||++++++++. .|+++.|+++ +.++.+.|+|+++
T Consensus 230 ------------vg---------------------gf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t~~~ 274 (439)
T TIGR03111 230 ------------TQ---------------------LYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDGLNK 274 (439)
T ss_pred ------------hC---------------------CCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcCHHH
Confidence 65 9999999999999999975 5999999874 6678999999999
Q ss_pred HHHHHhhhccchhhHHhhcccccccccCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccc
Q 006553 392 SLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLF 460 (641)
Q Consensus 392 ~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~ 460 (641)
+++||.||++|.+|++....++.. .++.++.++..+...+......+|++++.++++++.++|.++.
T Consensus 275 ~~~QR~RW~rG~~qv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 275 LYTQRQRWQRGELEVSHMFFESAN--KSIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHHhccHHHHHHHHHhhhh--hchhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999865433332 2345666666554444444557788888888988888876554
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=1.6e-31 Score=297.30 Aligned_cols=265 Identities=17% Similarity=0.123 Sum_probs=187.2
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhH
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNA 168 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~ 168 (641)
.++.|.|+|+||+|||+.. +.++|++++++++||+ .+|+|+||+++|++
T Consensus 62 ~~~~p~vaIlIPA~NE~~v---------I~~~l~s~L~~ldY~~----------------------~eIiVv~d~ndd~T 110 (504)
T PRK14716 62 SVPEKRIAIFVPAWREADV---------IGRMLEHNLATLDYEN----------------------YRIFVGTYPNDPAT 110 (504)
T ss_pred cCCCCceEEEEeccCchhH---------HHHHHHHHHHcCCCCC----------------------eEEEEEECCCChhH
Confidence 4458999999999999976 7889998877667752 25999998888875
Q ss_pred H---hhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcc--cCCCC---CEEEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 169 V---DNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSS--EISNG---PIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 169 ~---~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~--~~t~g---~~ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
. ++...++|+++.+.- ++++ .++||+|||++++.+. ....| |+|+++|||.++ +|++|+.....+.
T Consensus 111 ~~~v~~l~~~~p~v~~vv~-~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~-- 184 (504)
T PRK14716 111 LREVDRLAARYPRVHLVIV-PHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLP-- 184 (504)
T ss_pred HHHHHHHHHHCCCeEEEEe-CCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcC--
Confidence 3 334456788775552 2232 3689999999998531 11234 999999999999 8999998765543
Q ss_pred cCCceEEEEecCcccccCCcccccccchhh-H---HHHHHHhhhhcCCce-ecccceeEehhhhcCcccccccccccccc
Q 006553 241 KRGHEIAFVQHPQCFDIISENDLYGHYNLV-E---NQVELAGLGGYDAAM-YCGTACFHRRDSLSGAKYSYDCRNINEAR 315 (641)
Q Consensus 241 ~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~-~---~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~ 315 (641)
+.++||.|....+.+.+...+..... | +...+..++.+++++ ++|+|+++||++|+
T Consensus 185 ----~~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe--------------- 245 (504)
T PRK14716 185 ----RHDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALE--------------- 245 (504)
T ss_pred ----CCCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHH---------------
Confidence 34689999876554333222221211 1 222345667787765 68999999999998
Q ss_pred cccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCC-------------Cccc
Q 006553 316 NKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPER-------------PAFL 382 (641)
Q Consensus 316 ~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~-------------~a~~ 382 (641)
++++.. | .++|+.+++|||+++|++++.+|||++|++.+. .+.+
T Consensus 246 --------~l~~~~--------------G-G~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~ 302 (504)
T PRK14716 246 --------RLAAER--------------G-GQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATR 302 (504)
T ss_pred --------HHHhhc--------------C-CCCCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccccccccccccc
Confidence 363211 0 014999999999999999999999999997531 1345
Q ss_pred ccCCCCHHHHHHHHhhhccch-hhHHhhc-c-cccccccCCCCcchhhhhhhhhh
Q 006553 383 GLAPVTLDNSLVQIKRWSEGL-FQIFFSK-Y-CPFIYGYGKIKLGARMGYCNYLL 434 (641)
Q Consensus 383 g~aP~tl~~~~~Qr~RWa~G~-lqi~~~~-~-~p~~~~~~~l~~~qrl~y~~~~~ 434 (641)
+++|+|++++++||.||++|. +|...+. + .++. .+.+.+++|.+.+...+
T Consensus 303 e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 303 EFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 889999999999999999995 7875421 0 1111 23466788887776544
No 20
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.98 E-value=1.6e-30 Score=300.10 Aligned_cols=238 Identities=14% Similarity=0.117 Sum_probs=175.5
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhH
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNA 168 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~ 168 (641)
+++.|.|+|+||+|||+.. +.++|++++.+++||+ .+|++++|++++++
T Consensus 59 ~~~~~~vsIlVPa~nE~~v---------i~~~i~~ll~~ldYP~----------------------~eI~vi~~~nD~~T 107 (727)
T PRK11234 59 KPDEKPLAIMVPAWNETGV---------IGNMAELAATTLDYEN----------------------YHIFVGTYPNDPAT 107 (727)
T ss_pred cCCCCCEEEEEecCcchhh---------HHHHHHHHHHhCCCCC----------------------eEEEEEecCCChhH
Confidence 4567999999999999987 6888998876678872 25888877777664
Q ss_pred H---hhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhccc-----CCCCCEEEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 169 V---DNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSE-----ISNGPIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 169 ~---~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~-----~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
. +....++|+++.+..++ ++ .++||+|||+++..... ....++++++|||.++ +|++|+ .+.++.++
T Consensus 108 ~~~~~~l~~~~p~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~~ 182 (727)
T PRK11234 108 QADVDAVCARFPNVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVER 182 (727)
T ss_pred HHHHHHHHHHCCCcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcCC
Confidence 3 34445678876555433 33 36999999999997411 1234678889999999 899998 66777764
Q ss_pred cCCceEEEEecCcccccCCcccccccchhhHHH----HHHHhhhhcCCce-ecccceeE-eh--hhhcCccccccccccc
Q 006553 241 KRGHEIAFVQHPQCFDIISENDLYGHYNLVENQ----VELAGLGGYDAAM-YCGTACFH-RR--DSLSGAKYSYDCRNIN 312 (641)
Q Consensus 241 ~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~----~~~~g~d~~~~~~-~~Gtg~~~-RR--~aL~~~~~~~~~~~~~ 312 (641)
+ ++||.|....+.+.+...+..+...|. ..+++++.+++++ +.|+|++| || ++|.
T Consensus 183 ----~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~------------ 245 (727)
T PRK11234 183 ----K-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALL------------ 245 (727)
T ss_pred ----C-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHH------------
Confidence 4 899999664433333333333333433 4568888887764 58999999 55 3555
Q ss_pred ccccccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCC--------------
Q 006553 313 EARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPER-------------- 378 (641)
Q Consensus 313 ~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~-------------- 378 (641)
++|+ ..+|+.+++|||+++|++|+.+||+++|++.+.
T Consensus 246 -----------~~gg------------------g~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~ 296 (727)
T PRK11234 246 -----------EDGD------------------GIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQ 296 (727)
T ss_pred -----------HhcC------------------CCCcCCCcchHHHHHHHHHHHCCCEEEEccccccccccccccccccc
Confidence 3541 126999999999999999999999999998221
Q ss_pred -------CcccccCCCCHHHHHHHHhhhccc-hhhHHh
Q 006553 379 -------PAFLGLAPVTLDNSLVQIKRWSEG-LFQIFF 408 (641)
Q Consensus 379 -------~a~~g~aP~tl~~~~~Qr~RWa~G-~lqi~~ 408 (641)
.+++++.|+|++++++||.||.+| .+|.+.
T Consensus 297 ~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 297 HARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred ccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 347788999999999999999999 577753
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.96 E-value=3e-29 Score=252.80 Aligned_cols=220 Identities=20% Similarity=0.254 Sum_probs=165.5
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE 172 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~ 172 (641)
|.|+|+||+|||+.. +.++|+++.+ ++||.+ ..+|.|+|| ++|++.+..
T Consensus 1 p~vSViIp~yNe~~~---------l~~~L~sl~~-q~~~~~--------------------~~eIiVvD~-s~D~t~~~~ 49 (232)
T cd06437 1 PMVTVQLPVFNEKYV---------VERLIEAACA-LDYPKD--------------------RLEIQVLDD-STDETVRLA 49 (232)
T ss_pred CceEEEEecCCcHHH---------HHHHHHHHHh-cCCCcc--------------------ceEEEEEEC-CCCcHHHHH
Confidence 789999999999854 7888888775 677621 135778888 555543321
Q ss_pred c-------CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCce
Q 006553 173 G-------CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHE 245 (641)
Q Consensus 173 ~-------~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~ 245 (641)
. ...+.++++.+.++ .++|++|+|.|++. ++||||+++|||+++ +|++|+++..++.|+ +
T Consensus 50 ~~~~~~~~~~~~~i~~~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~-~~~~l~~~~~~~~~~----~ 116 (232)
T cd06437 50 REIVEEYAAQGVNIKHVRRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVP-PPDFLQKTPPYFADP----K 116 (232)
T ss_pred HHHHHHHhhcCCceEEEECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCC-ChHHHHHhhhhhcCC----C
Confidence 1 12457888887653 46799999999996 699999999999999 799999988877665 7
Q ss_pred EEEEecCcccccCCcccccccchh----hHHHHHHHhhhhcCCc-eecccceeEehhhhcCccccccccccccccccccc
Q 006553 246 IAFVQHPQCFDIISENDLYGHYNL----VENQVELAGLGGYDAA-MYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKR 320 (641)
Q Consensus 246 va~VQ~pq~f~n~~~~d~~~~~~~----~~~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~ 320 (641)
+++||++..+.|.+.+. ....+. ..+...+.+....+.. .++|+++++||++++
T Consensus 117 v~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-------------------- 175 (232)
T cd06437 117 LGFVQTRWGHINANYSL-LTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE-------------------- 175 (232)
T ss_pred eEEEecceeeEcCCCch-hhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHH--------------------
Confidence 99999877655543321 111111 1233333444333333 358999999999998
Q ss_pred chHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhc
Q 006553 321 SVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWS 400 (641)
Q Consensus 321 ~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa 400 (641)
++| ||+..+..||+++++|++.+||++.|++. +.++...|+|++++++||+||+
T Consensus 176 ---~vg---------------------g~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~rW~ 229 (232)
T cd06437 176 ---DAG---------------------GWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQHRWS 229 (232)
T ss_pred ---HhC---------------------CCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHHHhc
Confidence 465 89888899999999999999999999975 5678999999999999999999
Q ss_pred cch
Q 006553 401 EGL 403 (641)
Q Consensus 401 ~G~ 403 (641)
+|.
T Consensus 230 ~g~ 232 (232)
T cd06437 230 KGP 232 (232)
T ss_pred cCC
Confidence 983
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.96 E-value=7.8e-29 Score=248.29 Aligned_cols=227 Identities=28% Similarity=0.443 Sum_probs=178.1
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE 172 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~ 172 (641)
|.|+|+||+|||+.+. +++++++++. ++||.+ ..+|.|+||+++|++.+..
T Consensus 1 p~vsviip~~n~~~~~--------l~~~l~sl~~-q~~~~~--------------------~~eiivvdd~s~d~t~~~~ 51 (234)
T cd06421 1 PTVDVFIPTYNEPLEI--------VRKTLRAALA-IDYPHD--------------------KLRVYVLDDGRRPELRALA 51 (234)
T ss_pred CceEEEEecCCCcHHH--------HHHHHHHHHh-cCCCcc--------------------cEEEEEEcCCCchhHHHHH
Confidence 7899999999987543 7888888875 666631 1258899999998865432
Q ss_pred ---cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEE
Q 006553 173 ---GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFV 249 (641)
Q Consensus 173 ---~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~V 249 (641)
+.+ .+++++.+++ +.++|+||+|.|++. +++|||+++|+|.++ +|++|++++..|.+ ++++++|
T Consensus 52 ~~~~~~-~~~~~~~~~~----~~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~---~~~~~~v 118 (234)
T cd06421 52 AELGVE-YGYRYLTRPD----NRHAKAGNLNNALAH----TTGDFVAILDADHVP-TPDFLRRTLGYFLD---DPKVALV 118 (234)
T ss_pred HHhhcc-cCceEEEeCC----CCCCcHHHHHHHHHh----CCCCEEEEEccccCc-CccHHHHHHHHHhc---CCCeEEE
Confidence 222 2457777654 357899999999996 589999999999999 79999999999975 2379999
Q ss_pred ecCcccccCCccc----ccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHH
Q 006553 250 QHPQCFDIISEND----LYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDEL 325 (641)
Q Consensus 250 Q~pq~f~n~~~~d----~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~i 325 (641)
++++.+.+.+... .+......++.....+...++...++|+++++||++++. +
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~-----------------------i 175 (234)
T cd06421 119 QTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDE-----------------------I 175 (234)
T ss_pred ecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHH-----------------------h
Confidence 9998887654321 111222334444455555566777899999999999984 6
Q ss_pred HHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhh
Q 006553 326 EKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQ 405 (641)
Q Consensus 326 g~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lq 405 (641)
| ||+...+.||++++.+++++||++.|++. +.+++..|++++.+++||.||.+|.+|
T Consensus 176 g---------------------~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~~~~ 232 (234)
T cd06421 176 G---------------------GFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRLRWARGMLQ 232 (234)
T ss_pred C---------------------CCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHHHHhcCCee
Confidence 5 78878899999999999999999999986 456899999999999999999999998
Q ss_pred HH
Q 006553 406 IF 407 (641)
Q Consensus 406 i~ 407 (641)
++
T Consensus 233 ~~ 234 (234)
T cd06421 233 IL 234 (234)
T ss_pred eC
Confidence 63
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.96 E-value=5.2e-28 Score=245.79 Aligned_cols=228 Identities=22% Similarity=0.256 Sum_probs=171.8
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE 172 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~ 172 (641)
|.|+|+||+|||+.. +.++++++.+ ++||.+ ..+|.|+||+++|++.+..
T Consensus 1 p~vsIiIp~~Ne~~~---------l~~~l~sl~~-~~y~~~--------------------~~eiivVdd~s~d~t~~i~ 50 (241)
T cd06427 1 PVYTILVPLYKEAEV---------LPQLIASLSA-LDYPRS--------------------KLDVKLLLEEDDEETIAAA 50 (241)
T ss_pred CeEEEEEecCCcHHH---------HHHHHHHHHh-CcCCcc--------------------cEEEEEEECCCCchHHHHH
Confidence 789999999999854 7888998875 567621 1358888999998875543
Q ss_pred cC----CCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEE
Q 006553 173 GC----QLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAF 248 (641)
Q Consensus 173 ~~----~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~ 248 (641)
.. ...+++++.+.+ ..||++|+|.|++. ++||||+.+|||.++ +|+++.+++.+|.+. ++++++
T Consensus 51 ~~~~~~~~~~i~~~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~-~~~~l~~~~~~~~~~--~~~v~~ 118 (241)
T cd06427 51 RALRLPSIFRVVVVPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAP-DPDQLKKAVAAFARL--DDKLAC 118 (241)
T ss_pred HHhccCCCeeEEEecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCC-ChHHHHHHHHHHHhc--CCCEEE
Confidence 21 112344443322 36999999999996 689999999999999 799999999999732 248999
Q ss_pred EecCcccccCCcccc---cccchhhHHHHHHHhhhhcCCce-ecccceeEehhhhcCcccccccccccccccccccchHH
Q 006553 249 VQHPQCFDIISENDL---YGHYNLVENQVELAGLGGYDAAM-YCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDE 324 (641)
Q Consensus 249 VQ~pq~f~n~~~~d~---~~~~~~~~~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (641)
||++..+.|...+.. +.......++...++....+.++ ++|+++++||++++ +
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-----------------------~ 175 (241)
T cd06427 119 VQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR-----------------------E 175 (241)
T ss_pred EeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH-----------------------H
Confidence 999877765433211 01111222344445555555554 47888999999998 4
Q ss_pred HHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchh
Q 006553 325 LEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLF 404 (641)
Q Consensus 325 ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~l 404 (641)
+| ||+....+||++.+++++++||++.+++. .++++.|+|++++++||.||++|.+
T Consensus 176 vg---------------------g~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~Rw~~g~~ 231 (241)
T cd06427 176 LG---------------------GWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRSRWIKGYM 231 (241)
T ss_pred cC---------------------CCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHHHHhccHH
Confidence 65 88877889999999999999999999963 3478999999999999999999999
Q ss_pred hHHhh
Q 006553 405 QIFFS 409 (641)
Q Consensus 405 qi~~~ 409 (641)
|++..
T Consensus 232 ~~~~~ 236 (241)
T cd06427 232 QTWLV 236 (241)
T ss_pred HHHHH
Confidence 99864
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=7.5e-28 Score=242.57 Aligned_cols=225 Identities=23% Similarity=0.249 Sum_probs=166.4
Q ss_pred EEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH-----h
Q 006553 96 DILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV-----D 170 (641)
Q Consensus 96 dV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~-----~ 170 (641)
+|+||||||+.+. ++++++++.+ ++||. .+|.|+||+++|.+. +
T Consensus 1 siiip~~ne~~~~--------l~~~l~sl~~-q~~~~----------------------~eiiVvdd~s~D~t~~~~i~~ 49 (236)
T cd06435 1 SIHVPCYEEPPEM--------VKETLDSLAA-LDYPN----------------------FEVIVIDNNTKDEALWKPVEA 49 (236)
T ss_pred CeeEeeCCCcHHH--------HHHHHHHHHh-CCCCC----------------------cEEEEEeCCCCchhHHHHHHH
Confidence 4899999998543 7888888764 55651 258999999988642 2
Q ss_pred hhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEe
Q 006553 171 NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQ 250 (641)
Q Consensus 171 ~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ 250 (641)
......++++++..+++ .++|+||+|.|++.+ ..++|+|+++|+|..+ +|++|.+++..|.++ ++++|+
T Consensus 50 ~~~~~~~~i~~i~~~~~----~G~~~~a~n~g~~~a--~~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~ 118 (236)
T cd06435 50 HCAQLGERFRFFHVEPL----PGAKAGALNYALERT--APDAEIIAVIDADYQV-EPDWLKRLVPIFDDP----RVGFVQ 118 (236)
T ss_pred HHHHhCCcEEEEEcCCC----CCCchHHHHHHHHhc--CCCCCEEEEEcCCCCc-CHHHHHHHHHHhcCC----CeeEEe
Confidence 11111246777776543 467999999999975 2358999999999999 799999999998654 799999
Q ss_pred cCcccccCCcccccccch----hhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHH
Q 006553 251 HPQCFDIISENDLYGHYN----LVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELE 326 (641)
Q Consensus 251 ~pq~f~n~~~~d~~~~~~----~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig 326 (641)
+++.+.+...+ .+.... ..++..........+..++.|+++++||+++. ++|
T Consensus 119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-----------------------~iG 174 (236)
T cd06435 119 APQDYRDGEES-LFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALD-----------------------DVG 174 (236)
T ss_pred cCccccCCCcc-HHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHH-----------------------HhC
Confidence 98766543221 111100 11111111222333445678999999999998 476
Q ss_pred HhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhhH
Q 006553 327 KASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQI 406 (641)
Q Consensus 327 ~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi 406 (641)
||+.+...||++++++++++||++.|++. +..+...|+|+.++++||.||++|.+|+
T Consensus 175 ---------------------gf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~g~~~~ 231 (236)
T cd06435 175 ---------------------GWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAYGAVQI 231 (236)
T ss_pred ---------------------CCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhcchhhh
Confidence 88888889999999999999999999975 4458899999999999999999999999
Q ss_pred Hhh
Q 006553 407 FFS 409 (641)
Q Consensus 407 ~~~ 409 (641)
+.+
T Consensus 232 ~~~ 234 (236)
T cd06435 232 LKK 234 (236)
T ss_pred hhc
Confidence 854
No 25
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.95 E-value=2.3e-26 Score=262.78 Aligned_cols=240 Identities=15% Similarity=0.075 Sum_probs=173.7
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEE---EecCCC
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQI---IIDGRD 165 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~V---ldD~~~ 165 (641)
+.+.|.|+|+||+|||+.. +.++|++++++.+||+ .+|+| .||+.+
T Consensus 67 ~~~~~~vsIlVPa~nE~~V---------I~~~v~~ll~~ldYp~----------------------~~I~v~~~~nD~~T 115 (703)
T PRK15489 67 ERDEQPLAIMVPAWKEYDV---------IAKMIENMLATLDYRR----------------------YVIFVGTYPNDAET 115 (703)
T ss_pred ccCCCceEEEEeCCCcHHH---------HHHHHHHHHhcCCCCC----------------------eEEEEEecCCCccH
Confidence 4567899999999999976 7888999887678872 24777 466655
Q ss_pred hhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhc---ccCCCCCE--EEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 166 TNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVS---SEISNGPI--ILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 166 ~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s---~~~t~g~~--ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
.+..+....++|+++.|..+++ ...+||.|||++++.. .....++| |+++|||.+| +|+.|+.+ .++.++
T Consensus 116 ~~~~~~~~~~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~-~P~~L~~~-~~~~~~ 190 (703)
T PRK15489 116 ITEVERMRRRYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVL-HPLELKYF-NYLLPR 190 (703)
T ss_pred HHHHHHHhccCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCC-ChhHHHHH-HhhcCC
Confidence 5545555556788888876542 3478999999999863 11123444 9999999999 99999865 566543
Q ss_pred cCCceEEEEecCcccccCCcccc----cccchhhHHHHHHHhhhhcCCcee-cccceeEehhhhcCcccccccccccccc
Q 006553 241 KRGHEIAFVQHPQCFDIISENDL----YGHYNLVENQVELAGLGGYDAAMY-CGTACFHRRDSLSGAKYSYDCRNINEAR 315 (641)
Q Consensus 241 ~~~~~va~VQ~pq~f~n~~~~d~----~~~~~~~~~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~~~~~~~~~~~~~~~~ 315 (641)
+ .+||.|..-...+.... |..+....++..+.++..+++++. .|||++|||++|..
T Consensus 191 ---~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~-------------- 251 (703)
T PRK15489 191 ---K--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA-------------- 251 (703)
T ss_pred ---c--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH--------------
Confidence 1 46898743222222222 233444455667788888888765 88999999999973
Q ss_pred cccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCC-------------------
Q 006553 316 NKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNP------------------- 376 (641)
Q Consensus 316 ~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~------------------- 376 (641)
+-+. |.-.||+.+|+|||+++|+||+++|||+.|+.-
T Consensus 252 ---------l~~~---------------gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~ 307 (703)
T PRK15489 252 ---------LMKE---------------RGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERT 307 (703)
T ss_pred ---------HHHh---------------cCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEecccccccccccccccccc
Confidence 4110 000279999999999999999999999999321
Q ss_pred --CCCcccccCCCCHHHHHHHHhhhccchh-hHH
Q 006553 377 --ERPAFLGLAPVTLDNSLVQIKRWSEGLF-QIF 407 (641)
Q Consensus 377 --~~~a~~g~aP~tl~~~~~Qr~RWa~G~l-qi~ 407 (641)
...+.++..|.|+++.++||.||..|-. |-.
T Consensus 308 ~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 308 REMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred ccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1256678999999999999999999987 653
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.94 E-value=3.5e-28 Score=243.42 Aligned_cols=219 Identities=23% Similarity=0.272 Sum_probs=138.7
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh-
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN- 171 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~- 171 (641)
|.|+|+||+|||+.. ++++++++++ ++|| . .+|+|+||++++++.+.
T Consensus 1 P~v~Vvip~~~~~~~---------l~~~l~sl~~-~~~~--------~--------------~~v~vvd~~~~~~~~~~~ 48 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDV---------LRRCLESLLA-QDYP--------R--------------LEVVVVDDGSDDETAEIL 48 (228)
T ss_dssp --EEEE--BSS-HHH---------HHHHHHHHTT-SHHH--------T--------------EEEEEEEE-SSS-GCTTH
T ss_pred CEEEEEEEecCCHHH---------HHHHHHHHHc-CCCC--------C--------------eEEEEEECCCChHHHHHH
Confidence 789999999998765 7888888874 3332 1 35899999988775322
Q ss_pred --hcCCCC--cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEE
Q 006553 172 --EGCQLP--TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 172 --~~~~~p--~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
...++| +++++.++++++ .++|++|+|.+++. .++|+|+++|+|.++ +|++|++++.+|.+| +++
T Consensus 49 ~~~~~~~~~~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~~----~~~ 117 (228)
T PF13641_consen 49 RALAARYPRVRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVL-DPDWLERLLAAFADP----GVG 117 (228)
T ss_dssp HHHHHTTGG-GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS----S--
T ss_pred HHHHHHcCCCceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEE-CHHHHHHHHHHHHhC----CCC
Confidence 222345 468888765431 24799999999997 579999999999999 899999999999666 799
Q ss_pred EEecCcccccCCcccccccchhhHHH----HHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchH
Q 006553 248 FVQHPQCFDIISENDLYGHYNLVENQ----VELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVD 323 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d~~~~~~~~~~~----~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~ 323 (641)
+||++..+.+ .++ .+......++. ....+....+..+++|+|+++||+++.
T Consensus 118 ~v~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~----------------------- 172 (228)
T PF13641_consen 118 AVGGPVFPDN-DRN-WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE----------------------- 172 (228)
T ss_dssp EEEEEEEETT-CCC-EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH-----------------------
T ss_pred eEeeeEeecC-CCC-HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH-----------------------
Confidence 9998876654 222 22222222211 112333444556678999999999998
Q ss_pred HHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccc
Q 006553 324 ELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEG 402 (641)
Q Consensus 324 ~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 402 (641)
++| ||+.....||.++++++.++||++.|++. +.++...|.|++++++||.||++|
T Consensus 173 ~~g---------------------~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 173 EVG---------------------GFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp HH----------------------S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred HhC---------------------CCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 476 88888889999999999999999999974 557899999999999999999988
No 27
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.94 E-value=6.8e-26 Score=245.80 Aligned_cols=224 Identities=14% Similarity=0.158 Sum_probs=162.1
Q ss_pred CCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV 169 (641)
Q Consensus 90 ~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~ 169 (641)
+..|.|+|+||+|||+.. +++++++.++ ++||+ .+|.|+||+++|.+.
T Consensus 38 ~~~p~VSViiP~~nee~~---------l~~~L~Sl~~-q~Yp~----------------------~EIivvdd~s~D~t~ 85 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDEPE---------LYENLASFCR-QDYPG----------------------FQMLFGVQDPDDPAL 85 (373)
T ss_pred CCCCCeEEEEECCCCChh---------HHHHHHHHHh-cCCCC----------------------eEEEEEeCCCCCcHH
Confidence 448999999999999977 7888998876 67762 247788998888653
Q ss_pred h---hhcCCCCc--EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCc
Q 006553 170 D---NEGCQLPT--LVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGH 244 (641)
Q Consensus 170 ~---~~~~~~p~--v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~ 244 (641)
+ +...++|+ ++++..+++.+ .++|++|+|++++. +++|+++++|||.++ +||+|++++..|.||
T Consensus 86 ~iv~~~~~~~p~~~i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~-~p~~L~~lv~~~~~~---- 154 (373)
T TIGR03472 86 AVVRRLRADFPDADIDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISV-GPDYLRQVVAPLADP---- 154 (373)
T ss_pred HHHHHHHHhCCCCceEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCc-ChhHHHHHHHHhcCC----
Confidence 3 23334554 77786554333 35799999999886 699999999999999 799999999999776
Q ss_pred eEEEEecCcccccCCcccccccchhhHHHH-HHHh---hhhcCC-ceecccceeEehhhhcCcccccccccccccccccc
Q 006553 245 EIAFVQHPQCFDIISENDLYGHYNLVENQV-ELAG---LGGYDA-AMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDK 319 (641)
Q Consensus 245 ~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~-~~~g---~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~ 319 (641)
++++|+++.... +.+.........+.+. ..++ .+..+. .++.|++.++||+++++
T Consensus 155 ~v~~V~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~RR~~l~~------------------ 214 (373)
T TIGR03472 155 DVGLVTCLYRGR--PVPGFWSRLGAMGINHNFLPSVMVARALGRARFCFGATMALRRATLEA------------------ 214 (373)
T ss_pred CcceEeccccCC--CCCCHHHHHHHHHhhhhhhHHHHHHHhccCCccccChhhheeHHHHHH------------------
Confidence 799999864322 1111111111111110 1111 112222 34679999999999984
Q ss_pred cchHHHHHhhhhhhccccccCCCccccccccC--CCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHh
Q 006553 320 RSVDELEKASKVLASCSYEKDTQWGREMGLVY--GYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIK 397 (641)
Q Consensus 320 ~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~ 397 (641)
+| ||+. ++++||++++.+++++||++.|++. +......|+|++++++||.
T Consensus 215 -----iG---------------------Gf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~~~~q~~ 266 (373)
T TIGR03472 215 -----IG---------------------GLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFATLLAHEL 266 (373)
T ss_pred -----cC---------------------ChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHHHHHHHH
Confidence 66 7763 5789999999999999999999864 4446777899999999999
Q ss_pred hhccchh
Q 006553 398 RWSEGLF 404 (641)
Q Consensus 398 RWa~G~l 404 (641)
||++..-
T Consensus 267 RW~r~~~ 273 (373)
T TIGR03472 267 RWSRTIR 273 (373)
T ss_pred HHHhhhh
Confidence 9985544
No 28
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.93 E-value=7.2e-26 Score=231.33 Aligned_cols=228 Identities=18% Similarity=0.060 Sum_probs=151.1
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcCCC
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQL 176 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~~~ 176 (641)
|+||+|||++.. |+++|+++++ ++||. |.. + .++.++ .+|.|+|||++|
T Consensus 1 v~ip~yNE~~~~--------i~~~l~sv~~-q~y~~---~~~-~-------~~~~~~-~evivv~Dgs~d---------- 49 (244)
T cd04190 1 VCVTMYNEDEEE--------LARTLDSILK-NDYPF---CAR-G-------GDSWKK-IVVCVIFDGAIK---------- 49 (244)
T ss_pred CEEeeecCCHHH--------HHHHHHHHHH-hhHHH---Hhc-C-------CCCccE-EEEEEEeCCccc----------
Confidence 689999998432 7899999987 78872 111 0 011122 469999999987
Q ss_pred CcEEEEEccCCCCCCCCChHH-------HHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh-cccCCceEEE
Q 006553 177 PTLVYMAREKRPECPHNFKAG-------AMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM-DEKRGHEIAF 248 (641)
Q Consensus 177 p~v~yv~R~krp~~~~~~KAG-------aLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~-d~~~~~~va~ 248 (641)
++ .+|+. ++|.++. .+++|||+++|||+++ +|++|++++.+|. || ++|.
T Consensus 50 ---------~~-----~gk~~~~~~~~~~~~~~~~----~a~~e~i~~~DaD~~~-~~~~l~~l~~~~~~~p----~vg~ 106 (244)
T cd04190 50 ---------KN-----RGKRDSQLWFFNYFCRVLF----PDDPEFILLVDADTKF-DPDSIVQLYKAMDKDP----EIGG 106 (244)
T ss_pred ---------cc-----CcchHHHHHHHHHHHHHhh----cCCCCEEEEECCCCcC-CHhHHHHHHHHHHhCC----CEEE
Confidence 11 23443 4455555 3689999999999999 8999999999995 54 7999
Q ss_pred EecCcccccCCcccccccchhhHHH---HH-HHhhhhcCCc-eecccceeEehhhhcCcccccccccccccccccccchH
Q 006553 249 VQHPQCFDIISENDLYGHYNLVENQ---VE-LAGLGGYDAA-MYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVD 323 (641)
Q Consensus 249 VQ~pq~f~n~~~~d~~~~~~~~~~~---~~-~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~ 323 (641)
|++.+...|...+. ....+...|. .. .......+.. ++.|+++++|++++++
T Consensus 107 v~g~~~~~~~~~~~-~~~~q~~ey~~~~~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~---------------------- 163 (244)
T cd04190 107 VCGEIHPMGKKQGP-LVMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKG---------------------- 163 (244)
T ss_pred EEeeeEEcCCcchh-HHHhHheehhhhhhhcccHHHcCCceEECCCceEEEEehhhcC----------------------
Confidence 99987766543222 2222222221 11 1223334443 4579999999999985
Q ss_pred HHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEE--eCCCCCcccccCCCCHHHHHHHHhhhcc
Q 006553 324 ELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMH--YNPERPAFLGLAPVTLDNSLVQIKRWSE 401 (641)
Q Consensus 324 ~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y--~~~~~~a~~g~aP~tl~~~~~Qr~RWa~ 401 (641)
+++.......++|..++... ..+....+++||.+++++|.++||++.| ++. +.+++++|+|++++++||+||++
T Consensus 164 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~ 239 (244)
T cd04190 164 -DNGGKGPLLDYAYLTNTVDS-LHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWIN 239 (244)
T ss_pred -CccccccchhhccccCcccc-hHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhc
Confidence 22111111111111111110 0123345689999999999999999999 764 66789999999999999999999
Q ss_pred chhh
Q 006553 402 GLFQ 405 (641)
Q Consensus 402 G~lq 405 (641)
|++.
T Consensus 240 g~~~ 243 (244)
T cd04190 240 STIA 243 (244)
T ss_pred cccc
Confidence 9863
No 29
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.92 E-value=1.1e-24 Score=214.40 Aligned_cols=188 Identities=19% Similarity=0.210 Sum_probs=149.4
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHh--
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD-- 170 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~-- 170 (641)
|.|+|+||+|||+.. +++++++..+ ++||. .+|+|+||+++|++.+
T Consensus 1 p~vsviip~~n~~~~---------l~~~L~sl~~-q~~~~----------------------~eiivVdd~s~d~t~~~~ 48 (196)
T cd02520 1 PGVSILKPLCGVDPN---------LYENLESFFQ-QDYPK----------------------YEILFCVQDEDDPAIPVV 48 (196)
T ss_pred CCeEEEEecCCCCcc---------HHHHHHHHHh-ccCCC----------------------eEEEEEeCCCcchHHHHH
Confidence 789999999999876 6788888765 45541 3588899999987643
Q ss_pred -hhcCCCCc--EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEE
Q 006553 171 -NEGCQLPT--LVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 171 -~~~~~~p~--v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
....+.|+ +.++..+++.+ ..+|++|+|.|++. ++||+++++|+|..+ +|++|++++..+.++ +++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~----~~~ 117 (196)
T cd02520 49 RKLIAKYPNVDARLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISV-PPDYLRRMVAPLMDP----GVG 117 (196)
T ss_pred HHHHHHCCCCcEEEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceE-ChhHHHHHHHHhhCC----CCC
Confidence 22234453 45665544322 24699999999996 689999999999999 799999999998765 578
Q ss_pred EEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHH
Q 006553 248 FVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEK 327 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~ 327 (641)
+|++. +..|+++++||+++++ +|
T Consensus 118 ~v~~~---------------------------------~~~g~~~~~r~~~~~~-----------------------~g- 140 (196)
T cd02520 118 LVTCL---------------------------------CAFGKSMALRREVLDA-----------------------IG- 140 (196)
T ss_pred eEEee---------------------------------cccCceeeeEHHHHHh-----------------------cc-
Confidence 88753 5678999999999984 65
Q ss_pred hhhhhhccccccCCCccccccccC--CCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccc
Q 006553 328 ASKVLASCSYEKDTQWGREMGLVY--GYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEG 402 (641)
Q Consensus 328 ~a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 402 (641)
||+. ..+.||++.++++..+||++.|++. +.++...|.+++++++||.||++.
T Consensus 141 --------------------gf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 141 --------------------GFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred --------------------ChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHhcc
Confidence 6653 3468999999999999999999975 456889999999999999999863
No 30
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=1.9e-21 Score=208.01 Aligned_cols=278 Identities=17% Similarity=0.201 Sum_probs=204.8
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH--h
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV--D 170 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~--~ 170 (641)
-+-.|++|+|||+.. |.+..++.+-+++.+.+.- |...++|+.|+++++.+ |
T Consensus 144 hrTAilmPiynEd~~----rVfAgLrA~~eSla~Tg~~----------------------~~FD~FVLSDs~dpdialAE 197 (736)
T COG2943 144 HRTAILMPIYNEDVN----RVFAGLRATYESLAATGHA----------------------EHFDFFVLSDSRDPDIALAE 197 (736)
T ss_pred cceeEEeeccccCHH----HHHHHHHHHHHHHHhhCCc----------------------ccceEEEEcCCCCchhhhhH
Confidence 368899999999976 5777777777776653211 22459999999998852 2
Q ss_pred ---------hhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhccc
Q 006553 171 ---------NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEK 241 (641)
Q Consensus 171 ---------~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~ 241 (641)
+.+ ..-++.|-.|.+ |.+-||||+..-.|..| +..++++++|||++. .+|.+-+++..|.
T Consensus 198 q~a~~~l~~e~~-g~~~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvM-tgd~lvrLv~~ME--- 266 (736)
T COG2943 198 QKAWAELCRELG-GEGNIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVM-TGDCLVRLVRLME--- 266 (736)
T ss_pred HHHHHHHHHHhC-CCCceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeeccccc-CchHHHHHHHHHh---
Confidence 111 123566666655 36789999999999875 788999999999999 6999999999987
Q ss_pred CCceEEEEecCcccccCCcccccccch----hhHHHHHHHhhhhcCCc--eecccceeEehhhhcCcccccccccccccc
Q 006553 242 RGHEIAFVQHPQCFDIISENDLYGHYN----LVENQVELAGLGGYDAA--MYCGTACFHRRDSLSGAKYSYDCRNINEAR 315 (641)
Q Consensus 242 ~~~~va~VQ~pq~f~n~~~~d~~~~~~----~~~~~~~~~g~d~~~~~--~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~ 315 (641)
.+|+.|.+||-..-.|.+ ..|+..| +++=-+...|...|++. .|-|.|+++|-+++.+.
T Consensus 267 ~~P~aGlIQt~P~~~gg~--TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~h------------- 331 (736)
T COG2943 267 ANPDAGLIQTSPKASGGD--TLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEH------------- 331 (736)
T ss_pred hCCCCceeecchhhcCcc--hHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHh-------------
Confidence 356899999966655433 3454432 22223556888888763 68999999999999752
Q ss_pred cccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHH
Q 006553 316 NKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQ 395 (641)
Q Consensus 316 ~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Q 395 (641)
|+--. -=| ++.|....++.|+..+-.|.+.||.+--. ++...+++|.|.|+-|.++.
T Consensus 332 -------------------cgLp~--LpG-~~pFgG~ilSHDfvEAALmRRaGW~v~ia-~dL~GSyEE~PpnLlD~l~R 388 (736)
T COG2943 332 -------------------CGLPP--LPG-RGPFGGHILSHDFVEAALMRRAGWGVWIA-YDLDGSYEELPPNLLDELKR 388 (736)
T ss_pred -------------------cCCCC--CCC-CCCCCccccchHHHHHHHHhhcCceEEEe-ccCCCchhhCCchHHHHHhh
Confidence 21110 012 13677778999999999999999986554 45677899999999999999
Q ss_pred HhhhccchhhHHhhcccccccccCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhH
Q 006553 396 IKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPV 451 (641)
Q Consensus 396 r~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l 451 (641)
-+|||+|++|.+ +++ +.+++.+..|+.++.+.+.|+++...++++++..+
T Consensus 389 DRRWC~GNLqh~-----rl~-~~~GlHwvsR~h~~tGVmsYlsaPlWfl~ll~g~a 438 (736)
T COG2943 389 DRRWCHGNLQHF-----RLF-LVKGLHWVSRAHFLTGVMSYLSAPLWFLFLLLGTA 438 (736)
T ss_pred hhHhhhcchhhc-----eee-ccCCccHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999965 233 36899999999999988877765555544444333
No 31
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.91 E-value=1.6e-23 Score=208.59 Aligned_cols=218 Identities=16% Similarity=0.161 Sum_probs=159.1
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh----
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE---- 172 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~---- 172 (641)
|+||||||+.. ++++|+++++ ++||.+ ..+|+|+||+++|.+.+..
T Consensus 1 viip~~n~~~~---------l~~~l~sl~~-q~~~~~--------------------~~eiivvdd~s~d~t~~~~~~~~ 50 (229)
T cd04192 1 VVIAARNEAEN---------LPRLLQSLSA-LDYPKE--------------------KFEVILVDDHSTDGTVQILEFAA 50 (229)
T ss_pred CEEEecCcHHH---------HHHHHHHHHh-CCCCCC--------------------ceEEEEEcCCCCcChHHHHHHHH
Confidence 68999998754 7889998765 556521 1368999999988764432
Q ss_pred cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecC
Q 006553 173 GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 173 ~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 252 (641)
....++++++.++. + ...+|+.|+|.+++. +++|+|+++|+|.++ +|++|++++..+.++ ..+.|+++
T Consensus 51 ~~~~~~v~~~~~~~-~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~----~~~~v~~~ 118 (229)
T cd04192 51 AKPNFQLKILNNSR-V--SISGKKNALTTAIKA----AKGDWIVTTDADCVV-PSNWLLTFVAFIQKE----QIGLVAGP 118 (229)
T ss_pred hCCCcceEEeeccC-c--ccchhHHHHHHHHHH----hcCCEEEEECCCccc-CHHHHHHHHHHhhcC----CCcEEeee
Confidence 23346777776653 1 247999999999996 689999999999999 799999999988754 46778877
Q ss_pred cccccCCcccccccchhhHH---HHHHHhhhhcCCc-eecccceeEehhhhcCcccccccccccccccccccchHHHHHh
Q 006553 253 QCFDIISENDLYGHYNLVEN---QVELAGLGGYDAA-MYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKA 328 (641)
Q Consensus 253 q~f~n~~~~d~~~~~~~~~~---~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ 328 (641)
+.+... +..........+ .....+...++.+ .+.|+++++||+++.. +|
T Consensus 119 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~-----------------------~g-- 171 (229)
T cd04192 119 VIYFKG--KSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFE-----------------------VG-- 171 (229)
T ss_pred eeecCC--ccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHH-----------------------hc--
Confidence 765411 111111111111 1122223334444 4578889999999983 76
Q ss_pred hhhhhccccccCCCccccccccC--CCccchHHHHHHHHHcCC-eEEEeCCCCCcccccCCCCHHHHHHHHhhhccc
Q 006553 329 SKVLASCSYEKDTQWGREMGLVY--GYAVEDVVTGLTIQCRGW-KSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEG 402 (641)
Q Consensus 329 a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gw-rs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 402 (641)
||+. ...+||.+..+++.++|| ++.|++.+....+...|.+++++++||+||++|
T Consensus 172 -------------------gf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 172 -------------------GFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred -------------------CCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 7864 467899999999999999 999986555667899999999999999999998
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.91 E-value=1.1e-23 Score=211.67 Aligned_cols=227 Identities=17% Similarity=0.128 Sum_probs=158.5
Q ss_pred ceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh-
Q 006553 94 GVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE- 172 (641)
Q Consensus 94 ~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~- 172 (641)
+|+|+||||||+.+. ++++|+++.+. + +.+|+|+||+++|++.+..
T Consensus 1 ~isVvIp~~ne~~~~--------l~~~l~sl~~q-~------------------------~~eiivvdd~s~d~~~~~l~ 47 (235)
T cd06434 1 DVTVIIPVYDEDPDV--------FRECLRSILRQ-K------------------------PLEIIVVTDGDDEPYLSILS 47 (235)
T ss_pred CeEEEEeecCCChHH--------HHHHHHHHHhC-C------------------------CCEEEEEeCCCChHHHHHHH
Confidence 489999999998442 78888887651 1 2358999999998875542
Q ss_pred -cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEec
Q 006553 173 -GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQH 251 (641)
Q Consensus 173 -~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~ 251 (641)
....+.++++.. + +++|++|+|.|++. +++|+|+++|+|.++ +|++|++++..|.|+ +++.|++
T Consensus 48 ~~~~~~~~~v~~~-~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~----~v~~v~~ 112 (235)
T cd06434 48 QTVKYGGIFVITV-P-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVW-PPNALPEMLKPFEDP----KVGGVGT 112 (235)
T ss_pred hhccCCcEEEEec-C-----CCChHHHHHHHHHH----hCCCEEEEECCCcee-ChhHHHHHHHhccCC----CEeEEcC
Confidence 233456666543 2 46899999999997 589999999999999 799999999999765 7999998
Q ss_pred CcccccCCcccccccchhhHHHH----HHHhhhhcCCc-eecccceeEehhhhcCcccccccccccccccccccchHHHH
Q 006553 252 PQCFDIISENDLYGHYNLVENQV----ELAGLGGYDAA-MYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELE 326 (641)
Q Consensus 252 pq~f~n~~~~d~~~~~~~~~~~~----~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig 326 (641)
.+...+.+.+ .+......++.. ........++. ++.|.+.++||+++++ ++
T Consensus 113 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~-----------------------~~ 168 (235)
T cd06434 113 NQRILRPRDS-KWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKD-----------------------FL 168 (235)
T ss_pred ceEeecCccc-HHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhh-----------------------hh
Confidence 8877655321 111111112211 11222333333 3467778999999985 22
Q ss_pred HhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhh
Q 006553 327 KASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQ 405 (641)
Q Consensus 327 ~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lq 405 (641)
... .+++ .++ +|+. ....||.+++.+++++||+.+|++. +.++...|.++.++++||.||++|..+
T Consensus 169 ~~~------~~~~--~~~--~~~~-~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 169 FLE------EFTN--ETF--MGRR-LNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQLRWSRSNWR 234 (235)
T ss_pred hHH------Hhhh--hhh--cCCC-CCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhhhhhhcccC
Confidence 100 0000 000 1232 3678999999999999999999975 345778999999999999999999753
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.89 E-value=4.1e-22 Score=202.68 Aligned_cols=220 Identities=15% Similarity=0.123 Sum_probs=159.0
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhH
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNA 168 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~ 168 (641)
.+..|.|+|+||+|||+.. ++++++++.+ +++|. +..+|.|+||+++|++
T Consensus 25 ~~~~~~isVvip~~n~~~~---------l~~~l~si~~-q~~~~--------------------~~~eiivvdd~s~d~t 74 (251)
T cd06439 25 PAYLPTVTIIIPAYNEEAV---------IEAKLENLLA-LDYPR--------------------DRLEIIVVSDGSTDGT 74 (251)
T ss_pred CCCCCEEEEEEecCCcHHH---------HHHHHHHHHh-CcCCC--------------------CcEEEEEEECCCCccH
Confidence 4568999999999998854 6778887765 45542 1136899999999886
Q ss_pred HhhhcCCCC--cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceE
Q 006553 169 VDNEGCQLP--TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEI 246 (641)
Q Consensus 169 ~~~~~~~~p--~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~v 246 (641)
.+.... +. ++.++..++ +.+|++|+|.+++. +++|+|+++|+|.++ +|+++++++..+.++ ++
T Consensus 75 ~~~~~~-~~~~~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~ 139 (251)
T cd06439 75 AEIARE-YADKGVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALL-DPDALRLLVRHFADP----SV 139 (251)
T ss_pred HHHHHH-HhhCcEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCc-CHHHHHHHHHHhcCC----Cc
Confidence 543221 11 577776654 36899999999997 578999999999999 699999999999755 68
Q ss_pred EEEecCcccccCCcccccccchhhHH---HHHHHhhhhcCC-ceecccceeEehhhhcCcccccccccccccccccccch
Q 006553 247 AFVQHPQCFDIISENDLYGHYNLVEN---QVELAGLGGYDA-AMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSV 322 (641)
Q Consensus 247 a~VQ~pq~f~n~~~~d~~~~~~~~~~---~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~ 322 (641)
++|++.....+.+. .......++ ..........+. ....|++.++||++++
T Consensus 140 ~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------- 194 (251)
T cd06439 140 GAVSGELVIVDGGG---SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR---------------------- 194 (251)
T ss_pred cEEEeEEEecCCcc---cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc----------------------
Confidence 88887665543321 111111111 111111112222 2345555668998886
Q ss_pred HHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccc
Q 006553 323 DELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEG 402 (641)
Q Consensus 323 ~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 402 (641)
||......||.+++.++..+||++.|++. +..+...|.+.+++++|+.||++|
T Consensus 195 -------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~~~g 247 (251)
T cd06439 195 -------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRRRVRIAAG 247 (251)
T ss_pred -------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHHHHHHHHhc
Confidence 45555678999999999999999999975 456899999999999999999999
Q ss_pred hhh
Q 006553 403 LFQ 405 (641)
Q Consensus 403 ~lq 405 (641)
.+|
T Consensus 248 ~~~ 250 (251)
T cd06439 248 NLQ 250 (251)
T ss_pred ccc
Confidence 987
No 34
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.89 E-value=1.1e-20 Score=205.84 Aligned_cols=227 Identities=15% Similarity=0.068 Sum_probs=153.8
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhH
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNA 168 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~ 168 (641)
++..|+|+|+||+|||+.. +.++++++.+ ++||. ..+|+|+||+++|++
T Consensus 36 ~~~~p~VSVIIpa~Ne~~~---------L~~~L~sL~~-q~yp~---------------------~~eIIVVDd~StD~T 84 (384)
T TIGR03469 36 PEAWPAVVAVVPARNEADV---------IGECVTSLLE-QDYPG---------------------KLHVILVDDHSTDGT 84 (384)
T ss_pred CCCCCCEEEEEecCCcHhH---------HHHHHHHHHh-CCCCC---------------------ceEEEEEeCCCCCcH
Confidence 4578999999999999865 6888888775 56762 135899999999986
Q ss_pred Hhh---hcCCCC---cEEEEEccCCCCCCCCChHHHHHHHHHhcccC-CCCCEEEEecCCCCCCchHHHHHHHHHhhccc
Q 006553 169 VDN---EGCQLP---TLVYMAREKRPECPHNFKAGAMNALIRVSSEI-SNGPIILNLDCDMYANDADAIREALCFFMDEK 241 (641)
Q Consensus 169 ~~~---~~~~~p---~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~-t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~ 241 (641)
.+. ...+.| ++++++.+++|. ...+|+.|+|.|++.+... .++|+++.+|||..+ +|+++++++..+.++
T Consensus 85 ~~i~~~~~~~~~~~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~-~p~~l~~lv~~~~~~- 161 (384)
T TIGR03469 85 ADIARAAARAYGRGDRLTVVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAH-GPDNLARLVARARAE- 161 (384)
T ss_pred HHHHHHHHHhcCCCCcEEEecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCC-ChhHHHHHHHHHHhC-
Confidence 443 223344 788887544332 2469999999999974111 118999999999999 799999999999865
Q ss_pred CCceEEEEecCcccccCCcccccccc----hhhHHHHH---HHhhhhc-CCceecccceeEehhhhcCcccccccccccc
Q 006553 242 RGHEIAFVQHPQCFDIISENDLYGHY----NLVENQVE---LAGLGGY-DAAMYCGTACFHRRDSLSGAKYSYDCRNINE 313 (641)
Q Consensus 242 ~~~~va~VQ~pq~f~n~~~~d~~~~~----~~~~~~~~---~~g~d~~-~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~ 313 (641)
++++|....++... ..+... ...++... ....+.. ......|.+.++||+++++
T Consensus 162 ---~~~~vs~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~------------ 223 (384)
T TIGR03469 162 ---GLDLVSLMVRLRCE---SFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALER------------ 223 (384)
T ss_pred ---CCCEEEecccccCC---CHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHH------------
Confidence 34555443332211 111000 00111110 0111111 1223578899999999984
Q ss_pred cccccccchHHHHHhhhhhhccccccCCCccccccccC--CCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHH
Q 006553 314 ARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVY--GYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDN 391 (641)
Q Consensus 314 ~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~ 391 (641)
+| ||+. ..+.||++++.++.++|+++.+..... ......-+++++
T Consensus 224 -----------vG---------------------Gf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~~-~~s~r~~~~~~~ 270 (384)
T TIGR03469 224 -----------IG---------------------GIAAIRGALIDDCTLAAAVKRSGGRIWLGLAAR-TRSLRPYDGLGE 270 (384)
T ss_pred -----------cC---------------------CHHHHhhCcccHHHHHHHHHHcCCcEEEEecCc-eEEEEecCCHHH
Confidence 76 6653 468999999999999999999986532 223344579999
Q ss_pred HHHHHhhhc
Q 006553 392 SLVQIKRWS 400 (641)
Q Consensus 392 ~~~Qr~RWa 400 (641)
+++|+.||.
T Consensus 271 ~~~~~~r~~ 279 (384)
T TIGR03469 271 IWRMIARTA 279 (384)
T ss_pred HHHHHHHhH
Confidence 999999995
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.83 E-value=1.3e-19 Score=182.65 Aligned_cols=222 Identities=15% Similarity=0.073 Sum_probs=154.0
Q ss_pred ceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh--
Q 006553 94 GVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN-- 171 (641)
Q Consensus 94 ~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~-- 171 (641)
+|+|+||||||+.. ++++++++.+ +.+|. ...+|+|+||+++|++.+.
T Consensus 1 ~~sIiip~~n~~~~---------l~~~l~sl~~-q~~~~--------------------~~~evivvd~~s~d~~~~~~~ 50 (249)
T cd02525 1 FVSIIIPVRNEEKY---------IEELLESLLN-QSYPK--------------------DLIEIIVVDGGSTDGTREIVQ 50 (249)
T ss_pred CEEEEEEcCCchhh---------HHHHHHHHHh-ccCCC--------------------CccEEEEEeCCCCccHHHHHH
Confidence 48999999998755 6777887764 44541 0135889999999875432
Q ss_pred -hcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEe
Q 006553 172 -EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQ 250 (641)
Q Consensus 172 -~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ 250 (641)
...+.+.++++..+ ++++++|+|.|++. +++|+++++|+|.++ +|++|++++..+.++ +...|+
T Consensus 51 ~~~~~~~~v~~i~~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~-~~~~l~~~~~~~~~~----~~~~v~ 115 (249)
T cd02525 51 EYAAKDPRIRLIDNP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVY-PKDYILELVEALKRT----GADNVG 115 (249)
T ss_pred HHHhcCCeEEEEeCC------CCCchHHHHHHHHH----hCCCEEEEECCCccC-CHHHHHHHHHHHhcC----CCCEEe
Confidence 33345678888643 24789999999997 589999999999999 899999999988765 345555
Q ss_pred cCcccccCCcccccccchh-hHHHHHHHh---hhhcC---CceecccceeEehhhhcCcccccccccccccccccccchH
Q 006553 251 HPQCFDIISENDLYGHYNL-VENQVELAG---LGGYD---AAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVD 323 (641)
Q Consensus 251 ~pq~f~n~~~~d~~~~~~~-~~~~~~~~g---~d~~~---~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~ 323 (641)
++....+.+ .+..... ........+ ..... .....|.+.++||+++.+
T Consensus 116 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 170 (249)
T cd02525 116 GPMETIGES---KFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEK---------------------- 170 (249)
T ss_pred cceecCCCC---hHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHH----------------------
Confidence 543222111 1110000 000000000 01111 224578888999999983
Q ss_pred HHHHhhhhhhccccccCCCccccccccCC-CccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccc
Q 006553 324 ELEKASKVLASCSYEKDTQWGREMGLVYG-YAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEG 402 (641)
Q Consensus 324 ~ig~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 402 (641)
+| ||+.. ...||.+.+++++++|+++.|++. +......|.+++++++|+.||..|
T Consensus 171 -~g---------------------~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~~~r~~~~ 226 (249)
T cd02525 171 -VG---------------------GFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQYFRYGKW 226 (249)
T ss_pred -hC---------------------CCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHHHHHHhhh
Confidence 54 55543 347999999999999999999975 344677889999999999999999
Q ss_pred hhhHHhh
Q 006553 403 LFQIFFS 409 (641)
Q Consensus 403 ~lqi~~~ 409 (641)
..|+...
T Consensus 227 ~~~~~~~ 233 (249)
T cd02525 227 RARTLRK 233 (249)
T ss_pred hHHHHHh
Confidence 9999754
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.82 E-value=1.9e-19 Score=176.85 Aligned_cols=164 Identities=17% Similarity=0.112 Sum_probs=120.1
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhc--C
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEG--C 174 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~--~ 174 (641)
|+||+|||+.. ++++|+++.+. . | ..+|+|+||+++|++.+... .
T Consensus 1 ViIp~~Ne~~~---------l~~~l~sl~~~-~-~----------------------~~eIivvdd~S~D~t~~~~~~~~ 47 (191)
T cd06436 1 VLVPCLNEEAV---------IQRTLASLLRN-K-P----------------------NFLVLVIDDASDDDTAGIVRLAI 47 (191)
T ss_pred CEEeccccHHH---------HHHHHHHHHhC-C-C----------------------CeEEEEEECCCCcCHHHHHhhee
Confidence 68999999865 67888887652 1 2 13699999999998765543 2
Q ss_pred CCCcEEEEEccCCCCCCCCChHHHHHHHHHhccc-------CCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEE
Q 006553 175 QLPTLVYMAREKRPECPHNFKAGAMNALIRVSSE-------ISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 175 ~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~-------~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
..++++++.++.. + .+.+|++|+|.|++.+.. ..++|+|+++|||..+ +|++|+++..+|.|| +++
T Consensus 48 ~~~~v~~i~~~~~-~-~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~-~~~~l~~~~~~~~~~----~v~ 120 (191)
T cd06436 48 TDSRVHLLRRHLP-N-ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRL-DPNALEAVAPYFSDP----RVA 120 (191)
T ss_pred cCCcEEEEeccCC-c-CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCc-CHhHHHHHHHhhcCC----ceE
Confidence 3468898887532 1 246899999999997511 1135899999999999 799999988888766 799
Q ss_pred EEecCcccccCCcccccccch----hhHHHHHHHhhhhcCCceecccceeEehhhhcC
Q 006553 248 FVQHPQCFDIISENDLYGHYN----LVENQVELAGLGGYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d~~~~~~----~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
.||++..+.|.+.+. +...+ ...+..++.++...+...++|+|++|||++|++
T Consensus 121 ~v~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~~ 177 (191)
T cd06436 121 GTQSRVRMYNRHKNL-LTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALDG 177 (191)
T ss_pred EEeeeEEEecCCCCH-HHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHHH
Confidence 999999888765442 22222 223345677776666556799999999999984
No 37
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.81 E-value=6.6e-19 Score=172.50 Aligned_cols=137 Identities=21% Similarity=0.300 Sum_probs=112.0
Q ss_pred EEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHHH----HHHhhhhcCCc-eec
Q 006553 214 IILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQV----ELAGLGGYDAA-MYC 288 (641)
Q Consensus 214 ~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~----~~~g~d~~~~~-~~~ 288 (641)
+|+++|||+.+ +||++++++.++.|| ++++||+|..++| .++...+.+..++.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~-~~d~l~~~~~~~~~~----~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRL-PPDFLERLVAALEDP----KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCC-ChHHHHHHHHHHhCC----CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 58999999999 799999999999865 7999999999863 334445555555532 12333344443 568
Q ss_pred ccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhccccccCCCcccccccc-CCCccchHHHHHHHHHc
Q 006553 289 GTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLV-YGYAVEDVVTGLTIQCR 367 (641)
Q Consensus 289 Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~-~~svtED~~t~~~l~~~ 367 (641)
|+|.++||++++ ++| ||+ ..+++||+++++++.++
T Consensus 74 G~~~~~r~~~l~-----------------------~vg---------------------~~~~~~~~~ED~~l~~~l~~~ 109 (193)
T PF13632_consen 74 GSGMLFRREALR-----------------------EVG---------------------GFDDPFSIGEDMDLGFRLRRA 109 (193)
T ss_pred CcceeeeHHHHH-----------------------HhC---------------------cccccccccchHHHHHHHHHC
Confidence 999999999998 475 888 88999999999999999
Q ss_pred CCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccch
Q 006553 368 GWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGL 403 (641)
Q Consensus 368 Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~ 403 (641)
||++.|++. +.+++++|+|+.++++||+||..|.
T Consensus 110 G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 110 GYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred CCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 999999985 3568999999999999999999998
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.76 E-value=2.8e-18 Score=166.92 Aligned_cols=162 Identities=15% Similarity=0.080 Sum_probs=110.6
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcCCC
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQL 176 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~~~ 176 (641)
|+||+|||+.. +.++++++.+ ++||.+ ..+|.|+||+++|++.+.... .
T Consensus 1 VvIp~~ne~~~---------i~~~l~sl~~-~~~p~~--------------------~~eiivvdd~s~D~t~~~~~~-~ 49 (183)
T cd06438 1 ILIPAHNEEAV---------IGNTVRSLKA-QDYPRE--------------------LYRIFVVADNCTDDTAQVARA-A 49 (183)
T ss_pred CEEeccchHHH---------HHHHHHHHHh-cCCCCc--------------------ccEEEEEeCCCCchHHHHHHH-c
Confidence 68999999854 6888887764 566521 135899999999987654322 1
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHhcc-cCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCccc
Q 006553 177 PTLVYMAREKRPECPHNFKAGAMNALIRVSS-EISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCF 255 (641)
Q Consensus 177 p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~-~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f 255 (641)
+..++.|.+. ++++|++|+|.+++.+. ..+++|+++++|||+++ +|+++++++..|.+. ...||+....
T Consensus 50 -~~~~~~~~~~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~-~p~~l~~l~~~~~~~-----~~~v~g~~~~ 119 (183)
T cd06438 50 -GATVLERHDP---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLV-DPNALEELNARFAAG-----ARVVQAYYNS 119 (183)
T ss_pred -CCeEEEeCCC---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCC-ChhHHHHHHHHHhhC-----CCeeEEEEee
Confidence 1233444332 35789999999999741 12469999999999999 799999999999753 2467876665
Q ss_pred ccCCcccccccch----hhHHHHHHHhhhhcCCc-eecccceeEehhhhc
Q 006553 256 DIISENDLYGHYN----LVENQVELAGLGGYDAA-MYCGTACFHRRDSLS 300 (641)
Q Consensus 256 ~n~~~~d~~~~~~----~~~~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~ 300 (641)
.+...+. +.... ..++.....++..+++. .+.|+|+++||++++
T Consensus 120 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 120 KNPDDSW-ITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred eCCccCH-HHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 5543322 11111 22223344566666664 568999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=2.1e-16 Score=154.81 Aligned_cols=188 Identities=15% Similarity=0.092 Sum_probs=129.6
Q ss_pred CceEEEEecCCCC-CCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHh-
Q 006553 93 PGVDILVCTADPI-LEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD- 170 (641)
Q Consensus 93 P~VdV~Ipt~nE~-~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~- 170 (641)
|.|+|+||+|||+ .. ++++++++.+ +++| +.+|.|+|||+.|...+
T Consensus 1 p~vsiii~~~n~~~~~---------l~~~l~sl~~-q~~~----------------------~~eiivvd~gs~d~~~~~ 48 (202)
T cd04184 1 PLISIVMPVYNTPEKY---------LREAIESVRA-QTYP----------------------NWELCIADDASTDPEVKR 48 (202)
T ss_pred CeEEEEEecccCcHHH---------HHHHHHHHHh-CcCC----------------------CeEEEEEeCCCCChHHHH
Confidence 6899999999999 44 7888888765 3343 12589999999875322
Q ss_pred ---hhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHh-hcccCCceE
Q 006553 171 ---NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFF-MDEKRGHEI 246 (641)
Q Consensus 171 ---~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f-~d~~~~~~v 246 (641)
......+++.++..++ +.+++.|+|.|++. +++||++++|+|.++ +|++|.+++..+ .++ ++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~-~~~~l~~~~~~~~~~~----~~ 114 (202)
T cd04184 49 VLKKYAAQDPRIKVVFREE-----NGGISAATNSALEL----ATGEFVALLDHDDEL-APHALYEVVKALNEHP----DA 114 (202)
T ss_pred HHHHHHhcCCCEEEEEccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcC-ChHHHHHHHHHHHhCC----CC
Confidence 1223346677776543 46899999999997 589999999999999 799999999998 444 57
Q ss_pred EEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHH
Q 006553 247 AFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELE 326 (641)
Q Consensus 247 a~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig 326 (641)
++|.+.......+.. .........+. .+......+.|+++++||+++. ++|
T Consensus 115 ~~v~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~r~~~~-----------------------~ig 165 (202)
T cd04184 115 DLIYSDEDKIDEGGK-RSEPFFKPDWS-----PDLLLSQNYIGHLLVYRRSLVR-----------------------QVG 165 (202)
T ss_pred CEEEccHHhccCCCC-EeccccCCCCC-----HHHhhhcCCccceEeEEHHHHH-----------------------HhC
Confidence 777765544321111 00000000000 0001112345677889999998 365
Q ss_pred HhhhhhhccccccCCCccccccccCC-CccchHHHHHHHHHcCCeEEEeCC
Q 006553 327 KASKVLASCSYEKDTQWGREMGLVYG-YAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 327 ~~a~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||+.+ ...||.+.++|++.+||+..|+++
T Consensus 166 ---------------------gf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 166 ---------------------GFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred ---------------------CCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 66654 357999999999999999999975
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.68 E-value=6.2e-16 Score=151.58 Aligned_cols=190 Identities=16% Similarity=0.098 Sum_probs=130.3
Q ss_pred EEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCC-ChhHHh---h
Q 006553 96 DILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGR-DTNAVD---N 171 (641)
Q Consensus 96 dV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~-~~~~~~---~ 171 (641)
+|+|||||+++. +.++++++++++ ++++ +.+|.|+||++ +|.+.+ .
T Consensus 1 sviip~~n~~~~-------~~l~~~l~Sl~~-q~~~----------------------~~eiiivdd~ss~d~t~~~~~~ 50 (201)
T cd04195 1 SVLMSVYIKEKP-------EFLREALESILK-QTLP----------------------PDEVVLVKDGPVTQSLNEVLEE 50 (201)
T ss_pred CEEEEccccchH-------HHHHHHHHHHHh-cCCC----------------------CcEEEEEECCCCchhHHHHHHH
Confidence 489999998852 127888888876 3443 12588888987 554433 2
Q ss_pred hcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEec
Q 006553 172 EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQH 251 (641)
Q Consensus 172 ~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~ 251 (641)
...+.+ +.++.+++ +.|+++|+|.|++. ++||||+++|+|.++ .|+++++++..|.+ ++++++|.+
T Consensus 51 ~~~~~~-i~~i~~~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~-~~~~l~~~~~~~~~---~~~~~~~~~ 116 (201)
T cd04195 51 FKRKLP-LKVVPLEK-----NRGLGKALNEGLKH----CTYDWVARMDTDDIS-LPDRFEKQLDFIEK---NPEIDIVGG 116 (201)
T ss_pred HHhcCC-eEEEEcCc-----cccHHHHHHHHHHh----cCCCEEEEeCCcccc-CcHHHHHHHHHHHh---CCCeEEEcc
Confidence 222344 88888765 36899999999996 689999999999999 79999999999963 236788887
Q ss_pred CcccccCCcccccccchhh-HHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhh
Q 006553 252 PQCFDIISENDLYGHYNLV-ENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASK 330 (641)
Q Consensus 252 pq~f~n~~~~d~~~~~~~~-~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~ 330 (641)
.....+.+........... ..+.....+ ....++|++.++||+++.+ +|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~rr~~~~~-----------------------~g---- 166 (201)
T cd04195 117 GVLEFDSDGNDIGKRRLPTSHDDILKFAR---RRSPFNHPTVMFRKSKVLA-----------------------VG---- 166 (201)
T ss_pred cEEEECCCCCeeccccCCCCHHHHHHHhc---cCCCCCChHHhhhHHHHHH-----------------------cC----
Confidence 6654433221111110000 001111111 1222456678999999983 54
Q ss_pred hhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCC
Q 006553 331 VLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 331 ~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||......||+++..++..+|+++.|+++
T Consensus 167 -----------------~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 167 -----------------GYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred -----------------CcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 77777889999999999999999999874
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.65 E-value=4.2e-15 Score=156.26 Aligned_cols=193 Identities=14% Similarity=0.059 Sum_probs=127.9
Q ss_pred EEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh---
Q 006553 96 DILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE--- 172 (641)
Q Consensus 96 dV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~--- 172 (641)
+|+||+|||..+. ++++|+++.+ ++++. ...+|.|+||+++|.+.+..
T Consensus 1 SIIIp~~N~~~~~--------l~~~l~Sl~~-~~~~~--------------------~~~EIIvVDd~S~d~t~~~~~~~ 51 (299)
T cd02510 1 SVIIIFHNEALST--------LLRTVHSVIN-RTPPE--------------------LLKEIILVDDFSDKPELKLLLEE 51 (299)
T ss_pred CEEEEEecCcHHH--------HHHHHHHHHh-cCchh--------------------cCCEEEEEECCCCchHHHHHHHH
Confidence 5899999998332 7888888775 23321 11369999999998865432
Q ss_pred --cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEe
Q 006553 173 --GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQ 250 (641)
Q Consensus 173 --~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ 250 (641)
....|+++++..++ +.|++.|.|.|++. ++||||+.+|+|..+ +|++|++++..+.++. + ++|.
T Consensus 52 ~~~~~~~~v~vi~~~~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~wL~~ll~~l~~~~---~-~~v~ 117 (299)
T cd02510 52 YYKKYLPKVKVLRLKK-----REGLIRARIAGARA----ATGDVLVFLDSHCEV-NVGWLEPLLARIAENR---K-TVVC 117 (299)
T ss_pred HHhhcCCcEEEEEcCC-----CCCHHHHHHHHHHH----ccCCEEEEEeCCccc-CccHHHHHHHHHHhCC---C-eEEE
Confidence 23457899987764 36899999999997 689999999999999 7999999999987542 2 2222
Q ss_pred cCcccccCCc-ccccccc---------hhhHHHHH-------HHhh--hhcCCceecccceeEehhhhcCcccccccccc
Q 006553 251 HPQCFDIISE-NDLYGHY---------NLVENQVE-------LAGL--GGYDAAMYCGTACFHRRDSLSGAKYSYDCRNI 311 (641)
Q Consensus 251 ~pq~f~n~~~-~d~~~~~---------~~~~~~~~-------~~g~--d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~ 311 (641)
|.... .+. ...+... ....+... .... .....+...|.+.++||+++.
T Consensus 118 -p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~----------- 184 (299)
T cd02510 118 -PIIDV-IDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFL----------- 184 (299)
T ss_pred -eeecc-ccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHH-----------
Confidence 32111 000 0000000 00000000 0010 112234567888899999998
Q ss_pred cccccccccchHHHHHhhhhhhccccccCCCccccccccCCCc---cchHHHHHHHHHcCCeEEEeCCC
Q 006553 312 NEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYA---VEDVVTGLTIQCRGWKSMHYNPE 377 (641)
Q Consensus 312 ~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~ 377 (641)
++| ||+++-. .||++.++|+...||+++|++..
T Consensus 185 ------------~vG---------------------gfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a 220 (299)
T cd02510 185 ------------ELG---------------------GYDEGMDIWGGENLELSFKVWQCGGSIEIVPCS 220 (299)
T ss_pred ------------HhC---------------------CCCCcccccCchhHHHHHHHHHcCCeEEEeecc
Confidence 476 6766543 49999999999999999998753
No 42
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.63 E-value=2.7e-15 Score=146.23 Aligned_cols=154 Identities=16% Similarity=0.190 Sum_probs=115.7
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhH
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVE 271 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~ 271 (641)
.+.|.+||..+++. ..++|++++.|+|..+ +|++|++++..+.|| ++++|.++....+.+ ...+.....+
T Consensus 15 ~N~Kv~nL~~~~~~---~a~~d~~~~~DsDi~v-~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~--~~~~~l~~~~ 84 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA---GAKYDYLVISDSDIRV-PPDYLRELVAPLADP----GVGLVTGLPRGVPAR--GFWSRLEAAF 84 (175)
T ss_pred CChHHHHHHHHHHh---hCCCCEEEEECCCeeE-CHHHHHHHHHHHhCC----CCcEEEecccccCCc--CHHHHHHHHH
Confidence 47899999999995 1699999999999999 799999999999987 799998876654433 2222212222
Q ss_pred HHHHHHhhh-hcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhccccccCCCcccccccc
Q 006553 272 NQVELAGLG-GYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLV 350 (641)
Q Consensus 272 ~~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~ 350 (641)
......-.. .-+..++.|..+++||++|++ +| ||.
T Consensus 85 ~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~-----------------------~G---------------------G~~ 120 (175)
T PF13506_consen 85 FNFLPGVLQALGGAPFAWGGSMAFRREALEE-----------------------IG---------------------GFE 120 (175)
T ss_pred HhHHHHHHHHhcCCCceecceeeeEHHHHHH-----------------------cc---------------------cHH
Confidence 221111111 224567899999999999984 66 443
Q ss_pred C--CCccchHHHHHHHHHcCCeEEEeCCCCCcccccCC----CCHHHHHHHHhhhcc
Q 006553 351 Y--GYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAP----VTLDNSLVQIKRWSE 401 (641)
Q Consensus 351 ~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP----~tl~~~~~Qr~RWa~ 401 (641)
. +.++||+.+|-+++++||+++..+. ++.....| .+++++++++.||++
T Consensus 121 ~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 121 ALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred HHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 3 5799999999999999999999874 33445666 589999999999985
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.62 E-value=1.3e-14 Score=147.78 Aligned_cols=200 Identities=12% Similarity=0.004 Sum_probs=125.1
Q ss_pred CCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV 169 (641)
Q Consensus 90 ~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~ 169 (641)
+..|.|+|+||+|||+.. +...++.+.+..+.+ . +.+|.|+||+++|++.
T Consensus 6 ~~~~~vsVvIp~yne~~~---------l~~~l~~l~~~~~~~--------------------~-~~eiivvDdgS~D~t~ 55 (243)
T PLN02726 6 EGAMKYSIIVPTYNERLN---------IALIVYLIFKALQDV--------------------K-DFEIIVVDDGSPDGTQ 55 (243)
T ss_pred CCCceEEEEEccCCchhh---------HHHHHHHHHHHhccC--------------------C-CeEEEEEeCCCCCCHH
Confidence 456899999999999877 444444443210000 0 1369999999999875
Q ss_pred hhhc---CCC--CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCc
Q 006553 170 DNEG---CQL--PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGH 244 (641)
Q Consensus 170 ~~~~---~~~--p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~ 244 (641)
+... .+. +.+.++.+++ +.||++|+|.|++. ++||+++++|+|..+ +|++|.+++..+.++
T Consensus 56 ~i~~~~~~~~~~~~v~~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~~---- 121 (243)
T PLN02726 56 DVVKQLQKVYGEDRILLRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPKYLPSFIKKQRET---- 121 (243)
T ss_pred HHHHHHHHhcCCCcEEEEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHHHHHHHHHHHHhc----
Confidence 4322 222 3566666543 36899999999996 689999999999999 899999999988754
Q ss_pred eEEEEecCcccccCC-ccccccc-chhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccch
Q 006553 245 EIAFVQHPQCFDIIS-ENDLYGH-YNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSV 322 (641)
Q Consensus 245 ~va~VQ~pq~f~n~~-~~d~~~~-~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~ 322 (641)
+..+|.+.....+.. ....+.. .....+.....-..+.+..-.+|...++||++++.
T Consensus 122 ~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~--------------------- 180 (243)
T PLN02726 122 GADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALED--------------------- 180 (243)
T ss_pred CCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHH---------------------
Confidence 345565543221111 0000000 00111111111111222233466667899999984
Q ss_pred HHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCC
Q 006553 323 DELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 323 ~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
++.. ...+...+|+++.+++..+||++.+++.
T Consensus 181 --i~~~--------------------~~~~~~~~~~el~~~~~~~g~~i~~vp~ 212 (243)
T PLN02726 181 --LVSS--------------------VVSKGYVFQMEIIVRASRKGYRIEEVPI 212 (243)
T ss_pred --HHhh--------------------ccCCCcEEehHHHHHHHHcCCcEEEeCc
Confidence 5421 1112335789999999999999999874
No 44
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.62 E-value=5.6e-15 Score=143.27 Aligned_cols=187 Identities=17% Similarity=0.063 Sum_probs=125.3
Q ss_pred EEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcCC
Q 006553 96 DILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQ 175 (641)
Q Consensus 96 dV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~~ 175 (641)
+|+|||||++.. ++++++++.+ +++| + .+|.|+||+++|++.+.....
T Consensus 1 sivi~~~n~~~~---------l~~~l~sl~~-q~~~---------------------~-~evivvDd~s~d~~~~~~~~~ 48 (202)
T cd06433 1 SIITPTYNQAET---------LEETIDSVLS-QTYP---------------------N-IEYIVIDGGSTDGTVDIIKKY 48 (202)
T ss_pred CEEEeccchHHH---------HHHHHHHHHh-CCCC---------------------C-ceEEEEeCCCCccHHHHHHHh
Confidence 489999998744 6778887765 3343 1 358999999998865443211
Q ss_pred CCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCccc
Q 006553 176 LPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCF 255 (641)
Q Consensus 176 ~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f 255 (641)
.....++..++ ..++++|+|.|++. +++|||+++|+|..+ .|+.+.+++..+... ++..+|.+...+
T Consensus 49 ~~~~~~~~~~~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~-~~~~~~~~~~~~~~~---~~~~~v~g~~~~ 115 (202)
T cd06433 49 EDKITYWISEP-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTL-LPGALLAVVAAFAEH---PEVDVVYGDVLL 115 (202)
T ss_pred HhhcEEEEecC-----CcCHHHHHHHHHHH----cCCCEEEEeCCCccc-CchHHHHHHHHHHhC---CCccEEEeeeEE
Confidence 11234444433 36899999999996 689999999999999 799999998555422 256677766554
Q ss_pred ccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhcc
Q 006553 256 DIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASC 335 (641)
Q Consensus 256 ~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c 335 (641)
.+.+........ ...............+|+++++||+++.+ +|
T Consensus 116 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~--------- 158 (202)
T cd06433 116 VDENGRVIGRRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEK-----------------------YG--------- 158 (202)
T ss_pred EcCCCCcccCCC-----CcchhhhHHhhcCcccCcceEEEHHHHHH-----------------------hC---------
Confidence 433322111100 00011112223345678889999999984 54
Q ss_pred ccccCCCccccccccCC-CccchHHHHHHHHHcCCeEEEeCC
Q 006553 336 SYEKDTQWGREMGLVYG-YAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 336 ~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||+.+ ...||.+..+++..+|+++.++++
T Consensus 159 ------------~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 159 ------------GFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred ------------CCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 45543 468999999999999999998875
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.60 E-value=1.9e-14 Score=142.99 Aligned_cols=178 Identities=16% Similarity=0.063 Sum_probs=120.5
Q ss_pred eEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcC
Q 006553 95 VDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGC 174 (641)
Q Consensus 95 VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~ 174 (641)
|+|+||+||++.. ++++++++++ +.++ ..+|+|+||+++|++.+....
T Consensus 1 vsvii~~~n~~~~---------l~~~l~sl~~-q~~~----------------------~~evivvdd~s~d~~~~~~~~ 48 (221)
T cd02522 1 LSIIIPTLNEAEN---------LPRLLASLRR-LNPL----------------------PLEIIVVDGGSTDGTVAIARS 48 (221)
T ss_pred CEEEEEccCcHHH---------HHHHHHHHHh-ccCC----------------------CcEEEEEeCCCCccHHHHHhc
Confidence 6899999998865 6888888765 2222 135889999999887655432
Q ss_pred CCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcc
Q 006553 175 QLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQC 254 (641)
Q Consensus 175 ~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~ 254 (641)
++++++.. ..+|++|+|.|++. +++|+|+++|+|.++ +|+++++++..+.++ ....+.....
T Consensus 49 --~~~~~~~~-------~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~-~~~~l~~l~~~~~~~----~~~~~~~~~~ 110 (221)
T cd02522 49 --AGVVVISS-------PKGRARQMNAGAAA----ARGDWLLFLHADTRL-PPDWDAAIIETLRAD----GAVAGAFRLR 110 (221)
T ss_pred --CCeEEEeC-------CcCHHHHHHHHHHh----ccCCEEEEEcCCCCC-ChhHHHHHHHHhhcC----CcEEEEEEee
Confidence 56666643 24799999999996 579999999999999 799999987766544 2222222222
Q ss_pred cccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhc
Q 006553 255 FDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLAS 334 (641)
Q Consensus 255 f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~ 334 (641)
+.+.. . .. .........+....+..+.+.|.++||+++.+ +|
T Consensus 111 ~~~~~--~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-----------------------~G-------- 152 (221)
T cd02522 111 FDDPG--P-RL----RLLELGANLRSRLFGLPYGDQGLFIRRELFEE-----------------------LG-------- 152 (221)
T ss_pred ecCCc--c-ch----hhhhhcccceecccCCCcCCceEEEEHHHHHH-----------------------hC--------
Confidence 22111 1 00 00111111111112223456678899998873 65
Q ss_pred cccccCCCccccccccCCCccchHHHHHHHHHcCCeEEE
Q 006553 335 CSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMH 373 (641)
Q Consensus 335 c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y 373 (641)
||++....||++.+.++...|+++.+
T Consensus 153 -------------~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 153 -------------GFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred -------------CCCccccccHHHHHHHHHhCCCEEEc
Confidence 78887789999999999999999876
No 46
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.57 E-value=2.9e-14 Score=134.00 Aligned_cols=157 Identities=17% Similarity=0.194 Sum_probs=120.6
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcCCC
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQL 176 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~~~ 176 (641)
|+||+|||... ++++++++.+ ++++ +.+|.|+||++++++.+......
T Consensus 1 vii~~~~~~~~---------l~~~l~sl~~-~~~~----------------------~~~iiivdd~s~~~~~~~~~~~~ 48 (166)
T cd04186 1 IIIVNYNSLEY---------LKACLDSLLA-QTYP----------------------DFEVIVVDNASTDGSVELLRELF 48 (166)
T ss_pred CEEEecCCHHH---------HHHHHHHHHh-ccCC----------------------CeEEEEEECCCCchHHHHHHHhC
Confidence 68999998533 7888888765 2222 13599999999988655433223
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccc
Q 006553 177 PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFD 256 (641)
Q Consensus 177 p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~ 256 (641)
+++.++..++ +.+|++|+|.+++. +++++++++|+|.++ .|+++.+++..+.+. ++++++++.
T Consensus 49 ~~~~~~~~~~-----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~~~~~~~~---~~~~~~~~~---- 111 (166)
T cd04186 49 PEVRLIRNGE-----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVV-EPGALLELLDAAEQD---PDVGIVGPK---- 111 (166)
T ss_pred CCeEEEecCC-----CcChHHHhhHHHhh----CCCCEEEEECCCcEE-CccHHHHHHHHHHhC---CCceEEEcc----
Confidence 4577776643 46899999999997 589999999999999 799999999876642 367777543
Q ss_pred cCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhccc
Q 006553 257 IISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCS 336 (641)
Q Consensus 257 n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ 336 (641)
++|++.++||+++.+ +|
T Consensus 112 ------------------------------~~~~~~~~~~~~~~~-----------------------~~---------- 128 (166)
T cd04186 112 ------------------------------VSGAFLLVRREVFEE-----------------------VG---------- 128 (166)
T ss_pred ------------------------------CceeeEeeeHHHHHH-----------------------cC----------
Confidence 788999999999984 54
Q ss_pred cccCCCccccccccCCC--ccchHHHHHHHHHcCCeEEEeCC
Q 006553 337 YEKDTQWGREMGLVYGY--AVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 337 ye~~t~wG~~~G~~~~s--vtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||+... ..||.+.++++.++||++.+++.
T Consensus 129 -----------~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 129 -----------GFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred -----------CCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 555432 46999999999999999999875
No 47
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.57 E-value=1.7e-14 Score=145.12 Aligned_cols=191 Identities=15% Similarity=0.111 Sum_probs=122.2
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcCCC
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQL 176 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~~~ 176 (641)
+.||+|||+.+. ++++|+++.++ ..+|.|+||+++++.........
T Consensus 1 ~vI~~yn~~~~~--------l~~~l~sl~~q--------------------------~~~iivvDn~s~~~~~~~~~~~~ 46 (237)
T cd02526 1 AVVVTYNPDLSK--------LKELLAALAEQ--------------------------VDKVVVVDNSSGNDIELRLRLNS 46 (237)
T ss_pred CEEEEecCCHHH--------HHHHHHHHhcc--------------------------CCEEEEEeCCCCccHHHHhhccC
Confidence 479999999442 78888887641 12588899998877543322224
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHH---HHhhcccCCceEEEEecCc
Q 006553 177 PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREAL---CFFMDEKRGHEIAFVQHPQ 253 (641)
Q Consensus 177 p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v---~~f~d~~~~~~va~VQ~pq 253 (641)
+++.++..++ +.|+++|+|.|++.+.. .++|+++.+|+|.++ +|++|.+++ ..+. .+++++.+ +|+
T Consensus 47 ~~i~~i~~~~-----n~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~~---~~~~~~~~-~~~ 115 (237)
T cd02526 47 EKIELIHLGE-----NLGIAKALNIGIKAALE-NGADYVLLFDQDSVP-PPDMVEKLLAYKILSD---KNSNIGAV-GPR 115 (237)
T ss_pred CcEEEEECCC-----ceehHHhhhHHHHHHHh-CCCCEEEEECCCCCc-CHhHHHHHHHHHHhhc---cCCCeEEE-eee
Confidence 6788888765 35799999999997421 145999999999999 799999995 2222 23356655 444
Q ss_pred ccccCCcccccccchhhH-HH-HHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhh
Q 006553 254 CFDIISENDLYGHYNLVE-NQ-VELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKV 331 (641)
Q Consensus 254 ~f~n~~~~d~~~~~~~~~-~~-~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~ 331 (641)
......+..........+ .. ...............|+|+++||++++. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~-----------------------~g----- 167 (237)
T cd02526 116 IIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEK-----------------------VG----- 167 (237)
T ss_pred EEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHH-----------------------hC-----
Confidence 432221111111000000 00 0001111112334578899999999984 65
Q ss_pred hhccccccCCCccccccccCCCc--cchHHHHHHHHHcCCeEEEeCC
Q 006553 332 LASCSYEKDTQWGREMGLVYGYA--VEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 332 v~~c~ye~~t~wG~~~G~~~~sv--tED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||+.... .||++.++++..+||+..|++.
T Consensus 168 ----------------gfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 168 ----------------GFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred ----------------CCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 6765432 5899999999999999999975
No 48
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.56 E-value=1.2e-13 Score=137.61 Aligned_cols=191 Identities=14% Similarity=0.060 Sum_probs=123.9
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh---hc
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN---EG 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~---~~ 173 (641)
|+||+|||+.. ++++++++.++ .+ ++..+|+|+||+++|++.+. ..
T Consensus 1 ViIp~yn~~~~---------l~~~l~sl~~q-~~---------------------~~~~eiiiVDd~S~d~t~~~~~~~~ 49 (224)
T cd06442 1 IIIPTYNEREN---------IPELIERLDAA-LK---------------------GIDYEIIVVDDNSPDGTAEIVRELA 49 (224)
T ss_pred CeEeccchhhh---------HHHHHHHHHHh-hc---------------------CCCeEEEEEeCCCCCChHHHHHHHH
Confidence 68999998865 67778877652 22 11246999999998876432 23
Q ss_pred CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCc
Q 006553 174 CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQ 253 (641)
Q Consensus 174 ~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq 253 (641)
...+.+.++..++ +.||++|+|.|++. +.||+|+++|+|..+ +|+++.+++..+.++ +.++|.++.
T Consensus 50 ~~~~~i~~~~~~~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~g~~ 115 (224)
T cd06442 50 KEYPRVRLIVRPG-----KRGLGSAYIEGFKA----ARGDVIVVMDADLSH-PPEYIPELLEAQLEG----GADLVIGSR 115 (224)
T ss_pred HhCCceEEEecCC-----CCChHHHHHHHHHH----cCCCEEEEEECCCCC-CHHHHHHHHHHHhcC----CCCEEEEee
Confidence 3456777777665 47999999999997 688999999999999 799999999997665 234455443
Q ss_pred ccccCCcccccccchhhHH---HHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhh
Q 006553 254 CFDIISENDLYGHYNLVEN---QVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASK 330 (641)
Q Consensus 254 ~f~n~~~~d~~~~~~~~~~---~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~ 330 (641)
...... ...++....... .....-....+.....|++.++||+++++ +|+
T Consensus 116 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----------------------ig~--- 168 (224)
T cd06442 116 YVEGGG-VEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFRAYRREVLEK-----------------------LID--- 168 (224)
T ss_pred eecCCc-cCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCccchhhHHHHHH-----------------------Hhh---
Confidence 222111 011111111110 11111111223334567677899999984 641
Q ss_pred hhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCC
Q 006553 331 VLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 331 ~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
++......+|.++.+++...||++.+.+.
T Consensus 169 -----------------~~~~~~~~~~~~l~~~~~~~g~~i~~~p~ 197 (224)
T cd06442 169 -----------------SLVSKGYKFQLELLVRARRLGYRIVEVPI 197 (224)
T ss_pred -----------------hccCCCcEEeHHHHHHHHHcCCeEEEeCe
Confidence 22223346788899999999999999864
No 49
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.55 E-value=6e-14 Score=138.13 Aligned_cols=190 Identities=14% Similarity=0.061 Sum_probs=126.3
Q ss_pred EEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh---h
Q 006553 96 DILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN---E 172 (641)
Q Consensus 96 dV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~---~ 172 (641)
+|+||||||+.. +.++++++++ +++| ..+|+|+|||++|++.+. .
T Consensus 1 sIvIp~yn~~~~---------l~~~l~sl~~-q~~~----------------------~~eiiVvddgS~d~t~~~~~~~ 48 (214)
T cd04196 1 AVLMATYNGEKY---------LREQLDSILA-QTYK----------------------NDELIISDDGSTDGTVEIIKEY 48 (214)
T ss_pred CEEEEecCcHHH---------HHHHHHHHHh-CcCC----------------------CeEEEEEeCCCCCCcHHHHHHH
Confidence 589999999855 6788888875 3443 135999999999876432 3
Q ss_pred cCCCC-cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEec
Q 006553 173 GCQLP-TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQH 251 (641)
Q Consensus 173 ~~~~p-~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~ 251 (641)
+.+.| .+.++..++ .+|+++|+|.|++. ++||+|+++|+|.+. .|+.|.+++..+... ++.+++.+
T Consensus 49 ~~~~~~~~~~~~~~~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~-~~~~l~~~~~~~~~~---~~~~~~~~ 115 (214)
T cd04196 49 IDKDPFIIILIRNGK-----NLGVARNFESLLQA----ADGDYVFFCDQDDIW-LPDKLERLLKAFLKD---DKPLLVYS 115 (214)
T ss_pred HhcCCceEEEEeCCC-----CccHHHHHHHHHHh----CCCCEEEEECCCccc-ChhHHHHHHHHHhcC---CCceEEec
Confidence 33444 344444433 47999999999996 689999999999999 799999999985432 25677777
Q ss_pred CcccccCCcccccccchhhHHHH--HHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhh
Q 006553 252 PQCFDIISENDLYGHYNLVENQV--ELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKAS 329 (641)
Q Consensus 252 pq~f~n~~~~d~~~~~~~~~~~~--~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a 329 (641)
.....+.+... ........... ............+.|+++++||+++.+ +|
T Consensus 116 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-----------------------~~--- 168 (214)
T cd04196 116 DLELVDENGNP-IGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLEL-----------------------AL--- 168 (214)
T ss_pred CcEEECCCCCC-cccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHh-----------------------hc---
Confidence 65543322111 00000000000 000111122334678999999999984 54
Q ss_pred hhhhccccccCCCccccccccCC-CccchHHHHHHHHHcCCeEEEeCC
Q 006553 330 KVLASCSYEKDTQWGREMGLVYG-YAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 330 ~~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
++... ...||.+...++.. |++..|+++
T Consensus 169 ------------------~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 169 ------------------PFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred ------------------cccccccccchHHHHHHHHH-cCceEEcch
Confidence 56555 67899999998877 778888875
No 50
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.55 E-value=6.3e-14 Score=134.97 Aligned_cols=167 Identities=16% Similarity=0.131 Sum_probs=115.4
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh---c
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE---G 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~---~ 173 (641)
|+||+||++.. ++++|+++.+ ++++ +.+|.|+||+++|.+.+.. .
T Consensus 1 ivip~~n~~~~---------l~~~l~sl~~-q~~~----------------------~~eiivvdd~s~d~t~~~~~~~~ 48 (182)
T cd06420 1 LIITTYNRPEA---------LELVLKSVLN-QSIL----------------------PFEVIIADDGSTEETKELIEEFK 48 (182)
T ss_pred CEEeecCChHH---------HHHHHHHHHh-ccCC----------------------CCEEEEEeCCCchhHHHHHHHHH
Confidence 67999998755 7888888875 2232 1358899999998764332 1
Q ss_pred CCCC-cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecC
Q 006553 174 CQLP-TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 174 ~~~p-~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 252 (641)
...+ .++++.+++ +..+|++|+|.|++. ++||+|+++|+|..+ +|++|++++..+ ++ .++ |.++
T Consensus 49 ~~~~~~~~~~~~~~----~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~~~~~~-~~----~~~-v~g~ 113 (182)
T cd06420 49 SQFPIPIKHVWQED----EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIP-HPDFIADHIELA-EP----GVF-LSGS 113 (182)
T ss_pred hhcCCceEEEEcCC----cchhHHHHHHHHHHH----hcCCEEEEEcCCccc-CHHHHHHHHHHh-CC----CcE-Eecc
Confidence 1111 345555443 134799999999996 689999999999999 799999999887 43 344 4444
Q ss_pred cccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhh
Q 006553 253 QCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVL 332 (641)
Q Consensus 253 q~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v 332 (641)
+...+.+... ..+.|+++.++|+.+.+ +|
T Consensus 114 ~~~~~~~~~~----------------------~~~~~~~~~~~r~~~~~-----------------------~g------ 142 (182)
T cd06420 114 RVLLNEKLTE----------------------RGIRGCNMSFWKKDLLA-----------------------VN------ 142 (182)
T ss_pred eeecccccce----------------------eEeccceEEEEHHHHHH-----------------------hC------
Confidence 4332211110 34567788889988873 54
Q ss_pred hccccccCCCccccccccCCC---ccchHHHHHHHHHcCCeEEEeCC
Q 006553 333 ASCSYEKDTQWGREMGLVYGY---AVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 333 ~~c~ye~~t~wG~~~G~~~~s---vtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||+... -.||++.++|+.++|++..++.+
T Consensus 143 ---------------gf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 143 ---------------GFDEEFTGWGGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred ---------------CCCcccccCCcchHHHHHHHHHcCCcEEEecc
Confidence 665433 26999999999999977766643
No 51
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.53 E-value=1.7e-13 Score=134.66 Aligned_cols=162 Identities=15% Similarity=0.082 Sum_probs=117.6
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh---hc
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN---EG 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~---~~ 173 (641)
|+||||||+.. ++++|+++.+ +++| +.+|+|+||+++|++.+. .+
T Consensus 1 viI~~~n~~~~---------l~~~l~sl~~-q~~~----------------------~~eiiivD~~s~d~t~~~~~~~~ 48 (202)
T cd04185 1 AVVVTYNRLDL---------LKECLDALLA-QTRP----------------------PDHIIVIDNASTDGTAEWLTSLG 48 (202)
T ss_pred CEEEeeCCHHH---------HHHHHHHHHh-ccCC----------------------CceEEEEECCCCcchHHHHHHhc
Confidence 68999998854 7888888765 3443 125999999999887543 22
Q ss_pred CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCc
Q 006553 174 CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQ 253 (641)
Q Consensus 174 ~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq 253 (641)
... .+.+++.++ ..|++.++|.+++.+. ..++|+++++|+|.++ +|+++++++..+.++ +++++. |.
T Consensus 49 ~~~-~i~~~~~~~-----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~-~~~~l~~l~~~~~~~----~~~~~~-~~ 115 (202)
T cd04185 49 DLD-NIVYLRLPE-----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP-DPDALEKLLAYADKD----NPQFLA-PL 115 (202)
T ss_pred CCC-ceEEEECcc-----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCc-ChHHHHHHHHHHhcC----CceEec-ce
Confidence 222 367777654 3578999999998652 4579999999999999 799999999998755 566654 32
Q ss_pred ccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhh
Q 006553 254 CFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLA 333 (641)
Q Consensus 254 ~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~ 333 (641)
.+.. + + +++|.++||+++.. +|
T Consensus 116 ~~~~-~-----~----------------------~~~~~~~~~~~~~~-----------------------~g------- 137 (202)
T cd04185 116 VLDP-D-----G----------------------SFVGVLISRRVVEK-----------------------IG------- 137 (202)
T ss_pred eEcC-C-----C----------------------ceEEEEEeHHHHHH-----------------------hC-------
Confidence 2211 0 0 45678999999984 44
Q ss_pred ccccccCCCccccccccC--CCccchHHHHHHHHHcCCeEEEeCC
Q 006553 334 SCSYEKDTQWGREMGLVY--GYAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 334 ~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
|+.. ....||.+.+.++..+|++. |++.
T Consensus 138 --------------~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~ 167 (202)
T cd04185 138 --------------LPDKEFFIWGDDTEYTLRASKAGPGI-YVPD 167 (202)
T ss_pred --------------CCChhhhccchHHHHHHHHHHcCCcE-Eecc
Confidence 3322 13469999999999999999 8875
No 52
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.50 E-value=3.2e-13 Score=134.86 Aligned_cols=196 Identities=12% Similarity=0.014 Sum_probs=121.9
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh---c
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE---G 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~---~ 173 (641)
|+||+||++.. ++++++++.+ ++||. +.+|+|+||++.|.+.+.. .
T Consensus 1 ViIp~yn~~~~---------l~~~l~sl~~-q~~~~---------------------~~eiiVvDd~S~d~t~~i~~~~~ 49 (219)
T cd06913 1 IILPVHNGEQW---------LDECLESVLQ-QDFEG---------------------TLELSVFNDASTDKSAEIIEKWR 49 (219)
T ss_pred CEEeecCcHHH---------HHHHHHHHHh-CCCCC---------------------CEEEEEEeCCCCccHHHHHHHHH
Confidence 68999998754 7888888865 45541 1359999999998764321 1
Q ss_pred C--CCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEec
Q 006553 174 C--QLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQH 251 (641)
Q Consensus 174 ~--~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~ 251 (641)
. ..++++++..+++.+ .+.|.+.|+|.|++. ++||+++.+|+|..+ +|+.+.+.+..+.+.. . ++|-.
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~-~~~~l~~~~~~~~~~~---~-~~v~~ 119 (219)
T cd06913 50 KKLEDSGVIVLVGSHNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVM-MPQRIRLQYEAALQHP---N-SIIGC 119 (219)
T ss_pred HhCcccCeEEEEecccCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccC-ChhHHHHHHHHHHhCC---C-cEEEE
Confidence 1 234677776654221 246899999999996 689999999999999 7999999887776431 1 23322
Q ss_pred CcccccCCcccccccchhhH-HHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhh
Q 006553 252 PQCFDIISENDLYGHYNLVE-NQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASK 330 (641)
Q Consensus 252 pq~f~n~~~~d~~~~~~~~~-~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~ 330 (641)
+......+....+....... ............++.....+.++||+++.+ +|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~-----------------------~g---- 172 (219)
T cd06913 120 QVRRIPEDSTERYTRWINTLTREQLLTQVYTSHGPTVIMPTWFCSREWFSH-----------------------VG---- 172 (219)
T ss_pred EEEecCcccchhhHHHHHhcCHHHHHHHHHhhcCCccccccceeehhHHhh-----------------------cC----
Confidence 11111101000111000000 000111111123333334456899999984 65
Q ss_pred hhhccccccCCCccccccccCC--CccchHHHHHHHHHcCCeEEEeCCC
Q 006553 331 VLASCSYEKDTQWGREMGLVYG--YAVEDVVTGLTIQCRGWKSMHYNPE 377 (641)
Q Consensus 331 ~v~~c~ye~~t~wG~~~G~~~~--svtED~~t~~~l~~~Gwrs~y~~~~ 377 (641)
||+.. ...||+++.+++.++|+++.|++++
T Consensus 173 -----------------~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~ 204 (219)
T cd06913 173 -----------------PFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRC 204 (219)
T ss_pred -----------------CccchhccchhHHHHHHHHHHcCCceEEEcce
Confidence 66543 3469999999999999999999863
No 53
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.49 E-value=1.1e-13 Score=129.29 Aligned_cols=162 Identities=14% Similarity=0.098 Sum_probs=108.0
Q ss_pred EEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh---
Q 006553 96 DILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE--- 172 (641)
Q Consensus 96 dV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~--- 172 (641)
+|+|||||+... ++++++++.++ .+ ++.+|+|+||+++|++.+..
T Consensus 1 Svvip~~n~~~~---------l~~~l~sl~~q-~~----------------------~~~eiivvdd~s~d~~~~~~~~~ 48 (169)
T PF00535_consen 1 SVVIPTYNEAEY---------LERTLESLLKQ-TD----------------------PDFEIIVVDDGSTDETEEILEEY 48 (169)
T ss_dssp EEEEEESS-TTT---------HHHHHHHHHHH-SG----------------------CEEEEEEEECS-SSSHHHHHHHH
T ss_pred CEEEEeeCCHHH---------HHHHHHHHhhc-cC----------------------CCEEEEEeccccccccccccccc
Confidence 689999999655 78889988762 11 22469999999988764332
Q ss_pred cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecC
Q 006553 173 GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 173 ~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 252 (641)
....++++|++++++ .++++|+|.|++. ++++|++++|+|.++ .|+++.+++..+.+.+ +++......
T Consensus 49 ~~~~~~i~~i~~~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~-~~~~l~~l~~~~~~~~--~~~~~~~~~ 116 (169)
T PF00535_consen 49 AESDPNIRYIRNPEN-----LGFSAARNRGIKH----AKGEYILFLDDDDII-SPDWLEELVEALEKNP--PDVVIGSVI 116 (169)
T ss_dssp HCCSTTEEEEEHCCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEE
T ss_pred ccccccccccccccc-----ccccccccccccc----cceeEEEEeCCCceE-cHHHHHHHHHHHHhCC--CcEEEEEEE
Confidence 223578999999863 5999999999997 689999999999999 7999999999998742 234333322
Q ss_pred cccccCCcccccc--cchhhHHHHHHHhhhhcCCceecccceeEehhhhcC
Q 006553 253 QCFDIISENDLYG--HYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 253 q~f~n~~~~d~~~--~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
....+........ ......+..............++|+++++||+++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 167 (169)
T PF00535_consen 117 YIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEE 167 (169)
T ss_dssp EEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHH
T ss_pred EecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHh
Confidence 2222111111000 011233333445555666788999999999999983
No 54
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.48 E-value=5.8e-12 Score=140.53 Aligned_cols=170 Identities=15% Similarity=0.057 Sum_probs=106.9
Q ss_pred CCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHH---HHHHHhhhhcCC-c-
Q 006553 211 NGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVEN---QVELAGLGGYDA-A- 285 (641)
Q Consensus 211 ~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~---~~~~~g~d~~~~-~- 285 (641)
..|||+.+|||+.+ +|+.+.+++.-+.+ +++++.|.+--+..|...+. ..--|...| +..+++.+..-| .
T Consensus 201 ~~~~il~~DaDt~~-~p~~~~~lv~~m~~---d~~i~gvCG~t~i~n~~~s~-~t~~Q~fEY~ish~l~Ka~Es~fG~Vt 275 (527)
T PF03142_consen 201 FYEYILMVDADTKF-DPDSVNRLVDAMER---DPKIGGVCGETRIDNKGQSW-WTMYQVFEYAISHHLQKAFESVFGSVT 275 (527)
T ss_pred ceEEEEEecCCceE-cHHHHHHHHHHHcC---CCCeEEEeceeEEcCCCCCH-hhheeccchhHHHHHHHHHHHHhCcee
Confidence 45899999999999 89999999998862 34788888755555543332 222233444 334566555433 3
Q ss_pred eecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHH
Q 006553 286 MYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQ 365 (641)
Q Consensus 286 ~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~ 365 (641)
++.|..+++|-+|+...+-. ..+.... .++.+ .|..+..-+- .-..-..+.||-.++-.|.
T Consensus 276 CLPGcfsmyR~~a~~~~~~~--~~p~l~~--------~~i~~--------~Y~~~~~dtl-h~~nl~~lGEDR~LttLlL 336 (527)
T PF03142_consen 276 CLPGCFSMYRISALMDGDGY--WVPLLIS--------PDIIE--------KYSENPVDTL-HQKNLLDLGEDRWLTTLLL 336 (527)
T ss_pred ecCCcceeeeeehhcccccc--ccccccc--------hHHHH--------HHhhccchHH-HHHhhhhcchhHHHHHHHH
Confidence 34688889999999851100 0000000 00100 0100000000 0001125789999997777
Q ss_pred Hc--CCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccchhhH
Q 006553 366 CR--GWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQI 406 (641)
Q Consensus 366 ~~--Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi 406 (641)
++ |||..|++. +.+++.+|+|++.+++||+||..|++--
T Consensus 337 k~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~N 377 (527)
T PF03142_consen 337 KQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHN 377 (527)
T ss_pred hhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhh
Confidence 76 899999985 5568999999999999999999999844
No 55
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.47 E-value=3.3e-13 Score=144.32 Aligned_cols=198 Identities=14% Similarity=0.098 Sum_probs=128.1
Q ss_pred CCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHh
Q 006553 91 KLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD 170 (641)
Q Consensus 91 ~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~ 170 (641)
..|.|+|+||+||++.. ++++++++++ ++|+ + .+|.|+|||++|++.+
T Consensus 4 ~~p~vSVIIP~yN~~~~---------L~~~l~Sl~~-Qt~~--------~--------------~EIIiVdDgStD~t~~ 51 (328)
T PRK10073 4 STPKLSIIIPLYNAGKD---------FRAFMESLIA-QTWT--------A--------------LEIIIVNDGSTDNSVE 51 (328)
T ss_pred CCCeEEEEEeccCCHHH---------HHHHHHHHHh-CCCC--------C--------------eEEEEEeCCCCccHHH
Confidence 35899999999998854 7888888875 4443 1 3599999999987643
Q ss_pred ---hhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEE
Q 006553 171 ---NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 171 ---~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
....+.|++++++.+ ++|.++|.|.|++. ++||||+.+|+|..+ +|+.+++++..+.++ +.+++
T Consensus 52 i~~~~~~~~~~i~vi~~~------n~G~~~arN~gl~~----a~g~yi~flD~DD~~-~p~~l~~l~~~~~~~--~~dvv 118 (328)
T PRK10073 52 IAKHYAENYPHVRLLHQA------NAGVSVARNTGLAV----ATGKYVAFPDADDVV-YPTMYETLMTMALED--DLDVA 118 (328)
T ss_pred HHHHHHhhCCCEEEEECC------CCChHHHHHHHHHh----CCCCEEEEECCCCcc-ChhHHHHHHHHHHhC--CCCEE
Confidence 233456889888642 36899999999997 699999999999999 799999999887654 23444
Q ss_pred EEecCcccccCCcc-cccccc----hhhH--HHHHHHhhhhcCCceecccceeEehhhhcCccccccccccccccccccc
Q 006553 248 FVQHPQCFDIISEN-DLYGHY----NLVE--NQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKR 320 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~-d~~~~~----~~~~--~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~ 320 (641)
....-..+.+.... ...... ...+ .+.+........- .....+.++||+.+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~l~Rr~~l~~------------------- 178 (328)
T PRK10073 119 QCNADWCFRDTGETWQSIPSDRLRSTGVLSGPDWLRMALSSRRW-THVVWLGVYRRDFIVK------------------- 178 (328)
T ss_pred EEccEEEEeCCCccccccccccccccceechHHHHHHHHhhCCC-CccHhHHHHHHHHHHH-------------------
Confidence 33221111111100 000000 0000 0011111111010 1122345889998873
Q ss_pred chHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCC
Q 006553 321 SVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPE 377 (641)
Q Consensus 321 ~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~ 377 (641)
.| ..|..+...||+..++++..++.++.|++++
T Consensus 179 ----~~--------------------~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ 211 (328)
T PRK10073 179 ----NN--------------------IKFEPGLHHQDIPWTTEVMFNALRVRYTEQS 211 (328)
T ss_pred ----cC--------------------CccCCCCEeccHHHHHHHHHHCCEEEEECCC
Confidence 22 2466666679999999999999999999864
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.46 E-value=1.1e-13 Score=129.50 Aligned_cols=159 Identities=21% Similarity=0.251 Sum_probs=101.4
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhc---
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEG--- 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~--- 173 (641)
|+||||||+.. +.++++++.+ +.++ +.+|+|+||+++|++.+...
T Consensus 1 Viip~~n~~~~---------l~~~l~sl~~-q~~~----------------------~~~iivvdd~s~d~t~~~~~~~~ 48 (180)
T cd06423 1 IIVPAYNEEAV---------IERTIESLLA-LDYP----------------------KLEVIVVDDGSTDDTLEILEELA 48 (180)
T ss_pred CeecccChHHH---------HHHHHHHHHh-CCCC----------------------ceEEEEEeCCCccchHHHHHHHh
Confidence 67999998844 7888888775 3332 13599999999987644322
Q ss_pred CCC-CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecC
Q 006553 174 CQL-PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 174 ~~~-p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 252 (641)
... +.+.++..++ ..||+.|+|.|++. +++|+|+++|+|..+ .|+++++++..+.. +++++.|...
T Consensus 49 ~~~~~~~~~~~~~~-----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~~~~~~~---~~~~~~v~~~ 115 (180)
T cd06423 49 ALYIRRVLVVRDKE-----NGGKAGALNAGLRH----AKGDIVVVLDADTIL-EPDALKRLVVPFFA---DPKVGAVQGR 115 (180)
T ss_pred ccccceEEEEEecc-----cCCchHHHHHHHHh----cCCCEEEEECCCCCc-ChHHHHHHHHHhcc---CCCeeeEeee
Confidence 111 3355565543 47899999999997 589999999999999 79999999555543 2367777665
Q ss_pred cccccCCcccccccchhhHH----HHHHHhhhhcCC-ceecccceeEehhhhcC
Q 006553 253 QCFDIISENDLYGHYNLVEN----QVELAGLGGYDA-AMYCGTACFHRRDSLSG 301 (641)
Q Consensus 253 q~f~n~~~~d~~~~~~~~~~----~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~ 301 (641)
....+.+.+ .........+ .....+...... ..+.|+++++||+++++
T Consensus 116 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 168 (180)
T cd06423 116 VRVRNGSEN-LLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALRE 168 (180)
T ss_pred EEEecCcCc-ceeccchheecceeeeeeehhheecceeecCchHHHHHHHHHHH
Confidence 544332211 1111111111 111111111222 45689999999999983
No 57
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.44 E-value=4.1e-12 Score=130.60 Aligned_cols=190 Identities=12% Similarity=0.020 Sum_probs=117.3
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE 172 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~ 172 (641)
|.|+|+|||||++.- ++++++++.+....+ + ...+|.|+|||++|.+.+..
T Consensus 1 ~~vSVIi~~yN~~~~---------l~~~l~sl~~~~~~~------~--------------~~~EiIVvDdgStD~t~~i~ 51 (248)
T PRK10063 1 MLLSVITVAFRNLEG---------IVKTHASLRHLAQDP------G--------------ISFEWIVVDGGSNDGTREFL 51 (248)
T ss_pred CeEEEEEEeCCCHHH---------HHHHHHHHHHHHhCC------C--------------CCEEEEEEECcCcccHHHHH
Confidence 679999999998754 678888875311000 0 11369999999999876543
Q ss_pred cC--CCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEe
Q 006553 173 GC--QLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQ 250 (641)
Q Consensus 173 ~~--~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ 250 (641)
.. ...++++++.+ .+|+++|+|.|++. ++||+|+.+|+|... +|+.++.......++ +...++
T Consensus 52 ~~~~~~~~i~~i~~~------~~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~-~~~~~~~~~~~~~~~---~~~~v~- 116 (248)
T PRK10063 52 ENLNGIFNLRFVSEP------DNGIYDAMNKGIAM----AQGRFALFLNSGDIF-HQDAANFVRQLKMQK---DNAMII- 116 (248)
T ss_pred HHhcccCCEEEEECC------CCCHHHHHHHHHHH----cCCCEEEEEeCCccc-CcCHHHHHHHHHhCC---CCeEEE-
Confidence 21 11357777532 25899999999996 689999999999999 788765433332222 233333
Q ss_pred cCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhh
Q 006553 251 HPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASK 330 (641)
Q Consensus 251 ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~ 330 (641)
+.......+.+. ...... +..........++.+.++||+.+..
T Consensus 117 g~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 159 (248)
T PRK10063 117 GDALLDFGDGHK-IKRSAK-------PGWYIYHSLPASHQAIFFPVSGLKK----------------------------- 159 (248)
T ss_pred eeeEEEcCCCcE-EEEccC-------ChhHHhcCCCCCCcEEEEEHHHHhc-----------------------------
Confidence 222211111111 111000 0000111122466778899988762
Q ss_pred hhhccccccCCCccccccccCC-CccchHHHHHHHHHcCCeEEEeCCCCC
Q 006553 331 VLASCSYEKDTQWGREMGLVYG-YAVEDVVTGLTIQCRGWKSMHYNPERP 379 (641)
Q Consensus 331 ~v~~c~ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~ 379 (641)
+||+.. ...||.+..+++..+|++..+++....
T Consensus 160 ----------------~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~ 193 (248)
T PRK10063 160 ----------------WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVS 193 (248)
T ss_pred ----------------CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeE
Confidence 145433 357999999999999999999986443
No 58
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.41 E-value=3.6e-12 Score=126.51 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=76.2
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh---hc
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN---EG 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~---~~ 173 (641)
|+||+|||+.. +.+.++++.+.. + ... ....+|+|+||+++|.+.+. ..
T Consensus 1 iiip~yN~~~~---------l~~~l~~l~~~~-~-------~~~-----------~~~~eiivvdd~S~D~t~~~~~~~~ 52 (211)
T cd04188 1 VVIPAYNEEKR---------LPPTLEEAVEYL-E-------ERP-----------SFSYEIIVVDDGSKDGTAEVARKLA 52 (211)
T ss_pred CEEcccChHHH---------HHHHHHHHHHHH-h-------ccC-----------CCCEEEEEEeCCCCCchHHHHHHHH
Confidence 68999999865 566677765420 0 000 01136899999999886433 22
Q ss_pred CCCCcE-EEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 174 CQLPTL-VYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 174 ~~~p~v-~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
.+.|.. +++..++ ..||++|+|.|++. ++||+|+.+|+|... +|+.+.+++..+.++
T Consensus 53 ~~~~~~i~~i~~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~-~~~~l~~l~~~~~~~ 110 (211)
T cd04188 53 RKNPALIRVLTLPK-----NRGKGGAVRAGMLA----ARGDYILFADADLAT-PFEELEKLEEALKTS 110 (211)
T ss_pred HhCCCcEEEEEccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhcc
Confidence 234443 6666554 25899999999997 689999999999999 799999999987654
No 59
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.40 E-value=2.9e-12 Score=133.34 Aligned_cols=187 Identities=16% Similarity=0.102 Sum_probs=120.9
Q ss_pred cCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChh-HHhhhcCCCCcE
Q 006553 101 TADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTN-AVDNEGCQLPTL 179 (641)
Q Consensus 101 t~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~-~~~~~~~~~p~v 179 (641)
||||+++. +++.|+++.++ . ..|.|+||+++++ ..+......+++
T Consensus 2 tyn~~~~~--------l~~~l~sl~~q------------------------~--~~iiVVDN~S~~~~~~~~~~~~~~~i 47 (281)
T TIGR01556 2 TFNPDLEH--------LGELITSLPKQ------------------------V--DRIIAVDNSPHSDQPLKNARLRGQKI 47 (281)
T ss_pred ccCccHHH--------HHHHHHHHHhc------------------------C--CEEEEEECcCCCcHhHHHHhccCCCe
Confidence 89987653 77778776541 0 2499999997543 223322345789
Q ss_pred EEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccccCC
Q 006553 180 VYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIIS 259 (641)
Q Consensus 180 ~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~ 259 (641)
.|+..++ +.|.|+|+|.|++.+- ..++|+|+.+|.|.++ +|+++.+++..+.++ +.++++|+ |..+. .+
T Consensus 48 ~~i~~~~-----N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~--~~~~~~~~-~~~~~-~~ 116 (281)
T TIGR01556 48 ALIHLGD-----NQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRP-GNAFLAAQWKLLSAE--NGQACALG-PRFFD-RG 116 (281)
T ss_pred EEEECCC-----CcchHHHHHHHHHHHH-HCCCCEEEEECCCCCC-CHHHHHHHHHHHHhc--CCceEEEC-CeEEc-CC
Confidence 9998654 3699999999999741 2368999999999999 799999999988642 12577775 43332 21
Q ss_pred ccccccc--chhhHHHHH-HHhhhh-cCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhcc
Q 006553 260 ENDLYGH--YNLVENQVE-LAGLGG-YDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASC 335 (641)
Q Consensus 260 ~~d~~~~--~~~~~~~~~-~~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c 335 (641)
.+..++. ......... ....+. ....+..++|+++||+++++ +|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~-----------------------iG--------- 164 (281)
T TIGR01556 117 TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQR-----------------------LG--------- 164 (281)
T ss_pred CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHH-----------------------hC---------
Confidence 1111111 000000000 000011 12234578899999999984 65
Q ss_pred ccccCCCccccccccCCC--ccchHHHHHHHHHcCCeEEEeCC
Q 006553 336 SYEKDTQWGREMGLVYGY--AVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 336 ~ye~~t~wG~~~G~~~~s--vtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||+++- =.||++..+|+.++||++.+++.
T Consensus 165 ------------~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 165 ------------MMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred ------------CccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 454431 25899999999999999999975
No 60
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.35 E-value=8.9e-12 Score=130.34 Aligned_cols=107 Identities=16% Similarity=0.078 Sum_probs=83.3
Q ss_pred CCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChh--H
Q 006553 91 KLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTN--A 168 (641)
Q Consensus 91 ~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~--~ 168 (641)
..|.|+|+|||||++.. +.++|+++++ ++||+ .+|.|+|||+++. +
T Consensus 3 ~~p~VSVIip~yN~~~~---------l~~~l~Svl~-Qt~~~----------------------~EiIVVDDgS~~~~~~ 50 (279)
T PRK10018 3 DNPLISIYMPTWNRQQL---------AIRAIKSVLR-QDYSN----------------------WEMIIVDDCSTSWEQL 50 (279)
T ss_pred CCCEEEEEEEeCCCHHH---------HHHHHHHHHh-CCCCC----------------------eEEEEEECCCCCHHHH
Confidence 46899999999998865 6788888876 45541 2588999999852 2
Q ss_pred Hhhh-cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553 169 VDNE-GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD 239 (641)
Q Consensus 169 ~~~~-~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d 239 (641)
.+.. ....++++|+..++ +.|++.|+|.|++. ++||||+.+|+|... .|+.|.+.+.++.+
T Consensus 51 ~~~~~~~~~~ri~~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~-~p~~l~~~~~~~~~ 112 (279)
T PRK10018 51 QQYVTALNDPRITYIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEW-TPNRLSVFLAHKQQ 112 (279)
T ss_pred HHHHHHcCCCCEEEEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCC-CccHHHHHHHHHHh
Confidence 2211 11346899987654 47999999999996 699999999999999 79999999988753
No 61
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.34 E-value=9e-11 Score=125.86 Aligned_cols=128 Identities=14% Similarity=0.129 Sum_probs=86.6
Q ss_pred CCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV 169 (641)
Q Consensus 90 ~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~ 169 (641)
+..|.|+|+||+|||+.. +.++++++.+... . .... ....+.+|+|+|||++|++.
T Consensus 67 ~~~~~isVVIP~yNe~~~---------i~~~L~~l~~~~~-~-----~~~~---------~~~~~~EIIVVDDgStD~T~ 122 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEEDR---------LPKMLKETIKYLE-S-----RSRK---------DPKFKYEIIIVNDGSKDKTL 122 (333)
T ss_pred CCCeEEEEEEeeCCCHHH---------HHHHHHHHHHHHH-h-----hhcc---------CCCCCEEEEEEeCCCCCchH
Confidence 457899999999999876 4555555443100 0 0000 00112469999999999875
Q ss_pred hhh---cCC----CCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccC
Q 006553 170 DNE---GCQ----LPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKR 242 (641)
Q Consensus 170 ~~~---~~~----~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~ 242 (641)
+.. ..+ .++++++..++ +.||++|+|.|++. ++||+|+++|||... +|+.+.+++..+.+-.
T Consensus 123 ~i~~~~~~~~~~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~~~- 191 (333)
T PTZ00260 123 KVAKDFWRQNINPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGAT-DIDDFDKLEDIMLKIE- 191 (333)
T ss_pred HHHHHHHHhcCCCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCC-CHHHHHHHHHHHHHhh-
Confidence 432 111 13588887654 36999999999997 589999999999999 7999999988886410
Q ss_pred CceEEEEecC
Q 006553 243 GHEIAFVQHP 252 (641)
Q Consensus 243 ~~~va~VQ~p 252 (641)
++..++|.+-
T Consensus 192 ~~~~dvV~Gs 201 (333)
T PTZ00260 192 QNGLGIVFGS 201 (333)
T ss_pred ccCCceEEee
Confidence 1245566653
No 62
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.31 E-value=1.3e-11 Score=119.07 Aligned_cols=161 Identities=12% Similarity=0.090 Sum_probs=102.5
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh---hc
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN---EG 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~---~~ 173 (641)
|+||+|||+.. ++++++++.+ +.++ .++.+|+|+||+++|++.+. ..
T Consensus 1 iii~~~n~~~~---------l~~~l~sl~~-~~~~--------------------~~~~eiivvd~~s~d~~~~~~~~~~ 50 (185)
T cd04179 1 VVIPAYNEEEN---------IPELVERLLA-VLEE--------------------GYDYEIIVVDDGSTDGTAEIARELA 50 (185)
T ss_pred CeecccChHhh---------HHHHHHHHHH-Hhcc--------------------CCCEEEEEEcCCCCCChHHHHHHHH
Confidence 57999998865 6778888765 2221 12246999999998876432 23
Q ss_pred CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCc
Q 006553 174 CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQ 253 (641)
Q Consensus 174 ~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq 253 (641)
.+.+.++++..+++ .||++|+|.+++. +.||+++++|+|..+ +|++|++++..+.++ +.++|+.+.
T Consensus 51 ~~~~~~~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~g~~ 116 (185)
T cd04179 51 ARVPRVRVIRLSRN-----FGKGAAVRAGFKA----ARGDIVVTMDADLQH-PPEDIPKLLEKLLEG----GADVVIGSR 116 (185)
T ss_pred HhCCCeEEEEccCC-----CCccHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhcc----CCcEEEEEe
Confidence 34566777766653 5899999999997 688999999999999 799999999986653 355666665
Q ss_pred ccccCCc-ccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcC
Q 006553 254 CFDIISE-NDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 254 ~f~n~~~-~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
...+... ...+.......+................|...++||+++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (185)
T cd04179 117 FVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEA 165 (185)
T ss_pred ecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHH
Confidence 5443220 00111111111111111112222233456667899999984
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.23 E-value=1.3e-10 Score=112.34 Aligned_cols=128 Identities=16% Similarity=0.201 Sum_probs=81.0
Q ss_pred ceEEEEecCCChhHHhh---hcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHH
Q 006553 155 PIVQIIIDGRDTNAVDN---EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIR 231 (641)
Q Consensus 155 ~~I~VldD~~~~~~~~~---~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~ 231 (641)
.+|.|+||+++|++.+. ...+.|++.++..++ +.||++|+|.|++. +.+|+|+.+|+|..+ +|++|.
T Consensus 30 ~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~ 99 (181)
T cd04187 30 YEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQD-PPELIP 99 (181)
T ss_pred eEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCC-CHHHHH
Confidence 36899999999875432 233457788887654 36899999999997 588999999999999 799999
Q ss_pred HHHHHhhcccCCceEEEEecCcccccCCcccccccc-hhhHHHHHHHhhhhcCCceecccceeEehhhhcC
Q 006553 232 EALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHY-NLVENQVELAGLGGYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 232 ~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
+++..+ ++ +.++ |-+.....+ .+ ..... ...++.. .....+..-+...|+..++||+++++
T Consensus 100 ~l~~~~-~~--~~~~--v~g~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~ 161 (181)
T cd04187 100 EMLAKW-EE--GYDV--VYGVRKNRK--ES-WLKRLTSKLFYRL-INKLSGVDIPDNGGDFRLMDRKVVDA 161 (181)
T ss_pred HHHHHH-hC--CCcE--EEEEecCCc--ch-HHHHHHHHHHHHH-HHHHcCCCCCCCCCCEEEEcHHHHHH
Confidence 999885 33 1233 322222111 11 01000 1122111 11122223344567778999999984
No 64
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.21 E-value=3.6e-10 Score=118.27 Aligned_cols=204 Identities=15% Similarity=0.148 Sum_probs=121.3
Q ss_pred EEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh---h
Q 006553 96 DILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN---E 172 (641)
Q Consensus 96 dV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~---~ 172 (641)
+|+||.+|....+ .+.+++.+++.+.+. . ..+...+|.|+||++.++..+. .
T Consensus 1 SiIIPv~~~~~~~-------~i~~~l~~~l~~l~~--------~----------~~~~~~eiIvvd~~s~~~~~~~l~~~ 55 (281)
T PF10111_consen 1 SIIIPVRNRSERP-------DILERLRNCLESLSQ--------F----------QSDPDFEIIVVDDGSSDEFDEELKKL 55 (281)
T ss_pred CEEEEecCCccch-------HHHHHHHHHHHHHHh--------c----------CCCCCEEEEEEECCCchhHHHHHHHH
Confidence 5899999988653 244455554432111 0 0011246899999998764221 1
Q ss_pred cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecC
Q 006553 173 GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 173 ~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 252 (641)
..+....+|+.-+.. + ..-++|.|.|.|++. +++|+|+++|+|+++ .|+++.+++.+..+-..+ .-+++-.|
T Consensus 56 ~~~~~~~~~i~~~~~-~-~~f~~a~arN~g~~~----A~~d~l~flD~D~i~-~~~~i~~~~~~~~~l~~~-~~~~~~~p 127 (281)
T PF10111_consen 56 CEKNGFIRYIRHEDN-G-EPFSRAKARNIGAKY----ARGDYLIFLDADCIP-SPDFIEKLLNHVKKLDKN-PNAFLVYP 127 (281)
T ss_pred HhccCceEEEEcCCC-C-CCcCHHHHHHHHHHH----cCCCEEEEEcCCeee-CHHHHHHHHHHHHHHhcC-CCceEEEe
Confidence 112223347765431 1 123899999999997 699999999999999 799999999932211011 23445556
Q ss_pred cccccCCcccccccch-----hhHHHHHHH-hhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHH
Q 006553 253 QCFDIISENDLYGHYN-----LVENQVELA-GLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELE 326 (641)
Q Consensus 253 q~f~n~~~~d~~~~~~-----~~~~~~~~~-g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig 326 (641)
..+.+.+....+-+.. ....+.... ..+.++....+|++.+++|+.+. ++|
T Consensus 128 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~-----------------------~iG 184 (281)
T PF10111_consen 128 CLYLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFL-----------------------EIG 184 (281)
T ss_pred eeeccchhhHHHhhcchhcchHHHHHHHhhccccccccccccceEEEEEHHHHH-----------------------HhC
Confidence 5555433221111111 011111111 12233333346788889999998 476
Q ss_pred HhhhhhhccccccCCCccccccccCC---CccchHHHHHHHHHcCCeEEEeCC
Q 006553 327 KASKVLASCSYEKDTQWGREMGLVYG---YAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 327 ~~a~~v~~c~ye~~t~wG~~~G~~~~---svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
||+++ --.||++.+.||...|.+..+++.
T Consensus 185 ---------------------GfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 185 ---------------------GFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ---------------------CCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 44432 136999999999999999887754
No 65
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.20 E-value=4.5e-10 Score=119.10 Aligned_cols=121 Identities=16% Similarity=0.180 Sum_probs=84.6
Q ss_pred CCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV 169 (641)
Q Consensus 90 ~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~ 169 (641)
..-|.|+|+||||||+.. +.++|+++.+. .+. ....+|.|+|||++|.+.
T Consensus 28 ~~~~~vSVVIPayNee~~---------I~~~l~sl~~~-~~~--------------------~~~~EIIVVDDgStD~T~ 77 (306)
T PRK13915 28 KAGRTVSVVLPALNEEET---------VGKVVDSIRPL-LME--------------------PLVDELIVIDSGSTDATA 77 (306)
T ss_pred cCCCCEEEEEecCCcHHH---------HHHHHHHHHHH-hcc--------------------CCCcEEEEEeCCCccHHH
Confidence 356899999999999876 56777776541 110 011358999999999876
Q ss_pred hhhcCCCCcEEEEEccCC-CC-CCCCChHHHHHHHHHhcccCCCCCEEEEecCCCC-CCchHHHHHHHHHhh-cccCCce
Q 006553 170 DNEGCQLPTLVYMAREKR-PE-CPHNFKAGAMNALIRVSSEISNGPIILNLDCDMY-ANDADAIREALCFFM-DEKRGHE 245 (641)
Q Consensus 170 ~~~~~~~p~v~yv~R~kr-p~-~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~-~~~p~~L~~~v~~f~-d~~~~~~ 245 (641)
+..... +..++.+.+. +. ..+.||++|+|.+++. ++||+|+.+|||.. + +|+++.+++..+. |+ +
T Consensus 78 ~ia~~~--~~~v~~~~~~~~~~~~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~-~p~~l~~l~~~l~~~~----~ 146 (306)
T PRK13915 78 ERAAAA--GARVVSREEILPELPPRPGKGEALWRSLAA----TTGDIVVFVDADLINF-DPMFVPGLLGPLLTDP----G 146 (306)
T ss_pred HHHHHh--cchhhcchhhhhccccCCCHHHHHHHHHHh----cCCCEEEEEeCccccC-CHHHHHHHHHHHHhCC----C
Confidence 543321 1222222110 00 1246999999999996 68999999999997 7 7999999999886 54 5
Q ss_pred EEEEec
Q 006553 246 IAFVQH 251 (641)
Q Consensus 246 va~VQ~ 251 (641)
+++|.+
T Consensus 147 ~~~V~g 152 (306)
T PRK13915 147 VHLVKA 152 (306)
T ss_pred ceEEEE
Confidence 777765
No 66
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.13 E-value=4.4e-10 Score=118.93 Aligned_cols=197 Identities=17% Similarity=0.161 Sum_probs=130.5
Q ss_pred CCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh
Q 006553 92 LPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN 171 (641)
Q Consensus 92 ~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~ 171 (641)
-|.+.+.|+|||...+ +.+.++++.+ +.++. ..|.++|+++.|...+.
T Consensus 2 ~~~i~~iiv~yn~~~~---------l~~~l~~l~~-~~~~~----------------------~~iv~vDn~s~d~~~~~ 49 (305)
T COG1216 2 MPKISIIIVTYNRGED---------LVECLASLAA-QTYPD----------------------DVIVVVDNGSTDGSLEA 49 (305)
T ss_pred CcceEEEEEecCCHHH---------HHHHHHHHhc-CCCCC----------------------cEEEEccCCCCCCCHHH
Confidence 4789999999998876 5677776654 34431 12447898998886655
Q ss_pred hcCC-CCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCC-EEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEE
Q 006553 172 EGCQ-LPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGP-IILNLDCDMYANDADAIREALCFFMDEKRGHEIAFV 249 (641)
Q Consensus 172 ~~~~-~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~-~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~V 249 (641)
.... .|++.++.-.+| .|=||+-|.+++.+ .++++ ++++++-|+++ +|++|.+++..+.+. +..++|
T Consensus 50 ~~~~~~~~v~~i~~~~N-----lG~agg~n~g~~~a--~~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~~~---~~~~~~ 118 (305)
T COG1216 50 LKARFFPNVRLIENGEN-----LGFAGGFNRGIKYA--LAKGDDYVLLLNPDTVV-EPDLLEELLKAAEED---PAAGVV 118 (305)
T ss_pred HHhhcCCcEEEEEcCCC-----ccchhhhhHHHHHH--hcCCCcEEEEEcCCeee-ChhHHHHHHHHHHhC---CCCeEe
Confidence 5544 689999987653 67899999999975 24444 89999999999 899999999999753 356666
Q ss_pred ecCcccccCCc-ccccccchh---------hHHHHH--HHhhhhcCCceecccceeEehhhhcCcccccccccccccccc
Q 006553 250 QHPQCFDIISE-NDLYGHYNL---------VENQVE--LAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNK 317 (641)
Q Consensus 250 Q~pq~f~n~~~-~d~~~~~~~---------~~~~~~--~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~ 317 (641)
+.....++... -+..+.... ..++.. ....+...+ .++|.++++||++++.
T Consensus 119 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~li~~~~~~~---------------- 181 (305)
T COG1216 119 GPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVA-SLSGACLLIRREAFEK---------------- 181 (305)
T ss_pred eeeEecCCCCcchheeccccccccccceecccccccccccchhhhhh-hcceeeeEEcHHHHHH----------------
Confidence 65443322111 011110000 000000 000000001 4789999999999984
Q ss_pred cccchHHHHHhhhhhhccccccCCCccccccccC--CCccchHHHHHHHHHcCCeEEEeCC
Q 006553 318 DKRSVDELEKASKVLASCSYEKDTQWGREMGLVY--GYAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 318 ~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
+| ||++ -.-.||++.++|+...||++.|++.
T Consensus 182 -------vG---------------------~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~ 214 (305)
T COG1216 182 -------VG---------------------GFDERFFIYYEDVDLCLRARKAGYKIYYVPD 214 (305)
T ss_pred -------hC---------------------CCCcccceeehHHHHHHHHHHcCCeEEEeec
Confidence 65 3332 2347999999999999999999975
No 67
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.09 E-value=9.1e-09 Score=110.07 Aligned_cols=109 Identities=15% Similarity=0.139 Sum_probs=77.5
Q ss_pred CCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh
Q 006553 92 LPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN 171 (641)
Q Consensus 92 ~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~ 171 (641)
.|.++|+||+|||+..+ .+.++++.+.. +.. ....+|.|+|||++|.+.+.
T Consensus 5 ~~~vSVVIP~yNE~~~i---------~~~l~~l~~~~--------~~~------------~~~~EIIvVDDgS~D~T~~i 55 (325)
T PRK10714 5 IKKVSVVIPVYNEQESL---------PELIRRTTAAC--------ESL------------GKEYEILLIDDGSSDNSAEM 55 (325)
T ss_pred CCeEEEEEcccCchhhH---------HHHHHHHHHHH--------HhC------------CCCEEEEEEeCCCCCcHHHH
Confidence 46799999999999774 44444432210 000 01136999999999987554
Q ss_pred h---cCC-CCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553 172 E---GCQ-LPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD 239 (641)
Q Consensus 172 ~---~~~-~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d 239 (641)
. ..+ .++++.+..++ +.||++|+|+|+++ ++||+++++|||... +|+.+.+++..+.+
T Consensus 56 l~~~~~~~~~~v~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~-~p~~i~~l~~~~~~ 117 (325)
T PRK10714 56 LVEAAQAPDSHIVAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQN-PPEEIPRLVAKADE 117 (325)
T ss_pred HHHHHhhcCCcEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCC-CHHHHHHHHHHHHh
Confidence 2 111 24566665443 36999999999997 689999999999999 79999999998853
No 68
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.06 E-value=1.4e-09 Score=99.14 Aligned_cols=111 Identities=19% Similarity=0.203 Sum_probs=77.5
Q ss_pred EEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh---c
Q 006553 97 ILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE---G 173 (641)
Q Consensus 97 V~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~---~ 173 (641)
|+||++|+... ++.+++++.+. .++ +.+|+|+||+++++..+.. .
T Consensus 1 iii~~~~~~~~---------l~~~l~s~~~~-~~~----------------------~~~i~i~~~~~~~~~~~~~~~~~ 48 (156)
T cd00761 1 VIIPAYNEEPY---------LERCLESLLAQ-TYP----------------------NFEVIVVDDGSTDGTLEILEEYA 48 (156)
T ss_pred CEEeecCcHHH---------HHHHHHHHHhC-Ccc----------------------ceEEEEEeCCCCccHHHHHHHHH
Confidence 57999998543 78888887652 111 1358899999888753322 1
Q ss_pred CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecC
Q 006553 174 CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 174 ~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 252 (641)
.......++.+++ +.+|++++|.+++. .++|+++++|+|.++ +|+++...+..+... ++.++|+++
T Consensus 49 ~~~~~~~~~~~~~-----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~-~~~~~~~~~~~~~~~---~~~~~v~~~ 114 (156)
T cd00761 49 KKDPRVIRVINEE-----NQGLAAARNAGLKA----ARGEYILFLDADDLL-LPDWLERLVAELLAD---PEADAVGGP 114 (156)
T ss_pred hcCCCeEEEEecC-----CCChHHHHHHHHHH----hcCCEEEEECCCCcc-CccHHHHHHHHHhcC---CCceEEecc
Confidence 1113355555543 47999999999997 489999999999999 799999885544422 356777765
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.89 E-value=2.2e-08 Score=115.93 Aligned_cols=166 Identities=16% Similarity=0.136 Sum_probs=111.6
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHH-
Q 006553 195 KAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQ- 273 (641)
Q Consensus 195 KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~- 273 (641)
|--.+|.+.... +.+-+||+.+|+|+.+ +|+++.+++.-|. .+++||-+.+ +..|.-.. ...-.|...|-
T Consensus 426 ~r~~~y~~~~~L--~~~v~~il~vD~dT~~-~P~ai~~lv~~f~---~dp~VggaCG--~I~~~~~~-w~v~~Q~FEY~I 496 (862)
T KOG2571|consen 426 HRWVMYTAFKAL--MPSVDYILVVDADTRL-DPDALYHLVKVFD---EDPQVGGACG--RILNKGGS-WVVAYQNFEYAI 496 (862)
T ss_pred HHHHHHHHHHHh--cCcceEEEEecCCCcc-CcHHHHHHHHHhc---cCcccceecc--ccccCCCc-eEEeHHHHHHHH
Confidence 334455555543 4566799999999999 8999999999996 2347888876 33332222 12222444443
Q ss_pred --HHHHhhhhcCCceecccce--eEehhhhcCcccccccccccccccccccchHHHHHhhhhhhccccccCCCccccccc
Q 006553 274 --VELAGLGGYDAAMYCGTAC--FHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGL 349 (641)
Q Consensus 274 --~~~~g~d~~~~~~~~Gtg~--~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~ 349 (641)
..++.-+..=|.+.|=.|| ++|-+||.+-.. +. ...++.-|..-|.
T Consensus 497 sh~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~-----~~-------------------------~y~~~~~~~~~~~ 546 (862)
T KOG2571|consen 497 SHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV-----EY-------------------------FYGEKFSGPRHGI 546 (862)
T ss_pred HHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH-----Hh-------------------------hhchhhcCccccc
Confidence 3456666555555454454 799999985110 00 0111112222345
Q ss_pred cCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHhhhccc
Q 006553 350 VYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEG 402 (641)
Q Consensus 350 ~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 402 (641)
.+ +..||-.+..++..+||+..||.. +....++|+++.+++.||+||..|
T Consensus 547 ~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 547 QY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred cc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 45 489999999999999999999986 445899999999999999999999
No 70
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.73 E-value=6.3e-08 Score=97.96 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=77.7
Q ss_pred ceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhc
Q 006553 94 GVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEG 173 (641)
Q Consensus 94 ~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~ 173 (641)
.|+|+||||||+.. ++++|+++... ..+|+|+||+++|.+.+.+.
T Consensus 1 ~isvii~~~Ne~~~---------l~~~l~sl~~~--------------------------~~eiivvD~gStD~t~~i~~ 45 (229)
T cd02511 1 TLSVVIITKNEERN---------IERCLESVKWA--------------------------VDEIIVVDSGSTDRTVEIAK 45 (229)
T ss_pred CEEEEEEeCCcHHH---------HHHHHHHHhcc--------------------------cCEEEEEeCCCCccHHHHHH
Confidence 38999999998865 67777766420 01489999999998876544
Q ss_pred CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 174 CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 174 ~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
.++++++.. + ..+++.+.|.|+.. +.+|+|+++|||..+ +|+.++++...+.++
T Consensus 46 --~~~~~v~~~-~-----~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~-~~~~~~~l~~~~~~~ 99 (229)
T cd02511 46 --EYGAKVYQR-W-----WDGFGAQRNFALEL----ATNDWVLSLDADERL-TPELADEILALLATD 99 (229)
T ss_pred --HcCCEEEEC-C-----CCChHHHHHHHHHh----CCCCEEEEEeCCcCc-CHHHHHHHHHHHhCC
Confidence 245666665 2 36899999999996 689999999999999 799999999988754
No 71
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.55 E-value=1.1e-06 Score=84.67 Aligned_cols=161 Identities=14% Similarity=0.143 Sum_probs=100.9
Q ss_pred CceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHh--
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD-- 170 (641)
Q Consensus 93 P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~-- 170 (641)
+.-+|++|||||.+++|++ ..-|... .|+ ++ .+.+|.++||++-|.+.+
T Consensus 3 ~kYsvilPtYnEk~Nlpi~------~~li~~~-----~~e------~~------------~~~eiIivDD~SpDGt~~~a 53 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPII------TRLIAKY-----MSE------EG------------KKYEIIIVDDASPDGTQEVA 53 (238)
T ss_pred cceeEEeccccCCCCCeee------HHHHHhh-----hhh------hc------------CceEEEEEeCCCCCccHHHH
Confidence 4568999999999999875 1112211 111 11 123689999999876533
Q ss_pred -hhc--CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEE
Q 006553 171 -NEG--CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 171 -~~~--~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
.++ ...+++....|.+. -|=.-|--+|+++ +.|+|+++.|||--- +|.++-+.+..-.+. +.+
T Consensus 54 ~~L~k~yg~d~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDlsH-hPk~ipe~i~lq~~~----~~d 119 (238)
T KOG2978|consen 54 KALQKIYGEDNILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADLSH-HPKFIPEFIRLQKEG----NYD 119 (238)
T ss_pred HHHHHHhCCCcEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCccCC-CchhHHHHHHHhhcc----Ccc
Confidence 332 23578999988763 5777889999997 799999999999998 799998887665543 456
Q ss_pred EEecCcccccCCcccccccchhhHHHHHHHhhh-------hcCCceecccceeEehhhhcC
Q 006553 248 FVQHPQCFDIISENDLYGHYNLVENQVELAGLG-------GYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d-------~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
+|-+. +|.+. ...++ ..+.-.++-+|-+ +.+..=.+|+--.+|++.|+.
T Consensus 120 iv~GT-RYa~~--ggV~g--W~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~~ 175 (238)
T KOG2978|consen 120 IVLGT-RYAGG--GGVYG--WDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLEK 175 (238)
T ss_pred eeeee-eEcCC--Cceec--chhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHHh
Confidence 66543 22111 11111 1111122222222 123333578888899998873
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.47 E-value=1.1e-06 Score=92.42 Aligned_cols=222 Identities=23% Similarity=0.293 Sum_probs=141.9
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcce-EEEEecCCChh
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPI-VQIIIDGRDTN 167 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~-I~VldD~~~~~ 167 (641)
.+++|.|+|+-|--+-++. .|+.++.-+. .+|| +.+ ..+++|..|+.
T Consensus 81 ~~~LPgVSiikPl~G~d~n-----l~~Nlesfft-----s~Y~----------------------~~ElLfcv~s~eDpA 128 (431)
T KOG2547|consen 81 DPKLPGVSIIKPLKGVDPN-----LYHNLESFFT-----SQYH----------------------KYELLFCVESSEDPA 128 (431)
T ss_pred CCCCCCceEEeecccCCch-----hHHhHHHHHh-----hccC----------------------ceEEEEEEccCCCcH
Confidence 4479999999999988876 3444433222 2343 333 44555544443
Q ss_pred H--HhhhcCCCCcE---EEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccC
Q 006553 168 A--VDNEGCQLPTL---VYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKR 242 (641)
Q Consensus 168 ~--~~~~~~~~p~v---~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~ 242 (641)
. ++.+-+++|+| .++.-++ -+ -+-|-.|+=-|.+. ++.|+|++.|.|-.. .||.+.++.--|+.++
T Consensus 129 i~vv~~Ll~kyp~VdAklf~gG~~-vg--~npKInN~mpgy~~----a~ydlvlisDsgI~m-~pdtildm~t~M~she- 199 (431)
T KOG2547|consen 129 IEVVERLLKKYPNVDAKLFFGGEK-VG--LNPKINNMMPGYRA----AKYDLVLISDSGIFM-KPDTILDMATTMMSHE- 199 (431)
T ss_pred HHHHHHHHhhCCCcceEEEEcccc-cc--cChhhhccCHHHHH----hcCCEEEEecCCeee-cCchHHHHHHhhhccc-
Confidence 2 33333456654 3455544 22 46788888889996 689999999999999 8999999999998664
Q ss_pred CceEEEE-ecCcccccCCcccccccchhhHHHHHHH----hhhhcCCceecccceeEehhhhcCcccccccccccccccc
Q 006553 243 GHEIAFV-QHPQCFDIISENDLYGHYNLVENQVELA----GLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNK 317 (641)
Q Consensus 243 ~~~va~V-Q~pq~f~n~~~~d~~~~~~~~~~~~~~~----g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~ 317 (641)
++|+| |+|-.+ +....|. .-+ .++|...++ .-+-.+-.+.+|-.|+.|+++|++
T Consensus 200 --kmalvtq~py~~-dr~Gf~a-tle-~~~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~ld~---------------- 258 (431)
T KOG2547|consen 200 --KMALVTQTPYCK-DRQGFDA-TLE-QVYFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEALDE---------------- 258 (431)
T ss_pred --ceeeecCCceee-ccccchh-hhh-heeeccCCceEEEccccccccccccHHHHHHHHHHHH----------------
Confidence 89998 555443 2222111 111 123321111 012222233467777999999985
Q ss_pred cccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHHHh
Q 006553 318 DKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIK 397 (641)
Q Consensus 318 ~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~ 397 (641)
-|+.. ..| +.+.||+..+-.+..+||++.+... ++-...+-.+...+..|-.
T Consensus 259 -------~ggi~----------------~f~---~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri~ 310 (431)
T KOG2547|consen 259 -------CGGIS----------------AFG---GYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRII 310 (431)
T ss_pred -------hccHH----------------HHH---HHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHH
Confidence 33221 012 2589999999999999999999874 3334556678888888888
Q ss_pred hhc
Q 006553 398 RWS 400 (641)
Q Consensus 398 RWa 400 (641)
||.
T Consensus 311 rwv 313 (431)
T KOG2547|consen 311 RWV 313 (431)
T ss_pred Hhh
Confidence 887
No 73
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.43 E-value=1.4e-06 Score=81.77 Aligned_cols=98 Identities=18% Similarity=0.219 Sum_probs=70.0
Q ss_pred CCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhh
Q 006553 92 LPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN 171 (641)
Q Consensus 92 ~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~ 171 (641)
.|.++|+|||||++.. +.+.|+++.+ +.++ + .+|.|+|||++|++.+.
T Consensus 2 ~~~~siiip~~n~~~~---------l~~~l~s~~~-q~~~--------------------~--~eiivvddgs~d~t~~~ 49 (291)
T COG0463 2 MPKVSVVIPTYNEEEY---------LPEALESLLN-QTYK--------------------D--FEIIVVDDGSTDGTTEI 49 (291)
T ss_pred CccEEEEEeccchhhh---------HHHHHHHHHh-hhhc--------------------c--eEEEEEeCCCCCChHHH
Confidence 5889999999999955 6888888875 2332 1 24999999999986443
Q ss_pred h---cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHH
Q 006553 172 E---GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIR 231 (641)
Q Consensus 172 ~---~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~ 231 (641)
. ....+.+.+...+ ...|++.|+|.++.. ..+|+++.+|+|.+ ..+....
T Consensus 50 ~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~----~~~~~~~~~d~d~~-~~~~~~~ 102 (291)
T COG0463 50 AIEYGAKDVRVIRLINE-----RNGGLGAARNAGLEY----ARGDYIVFLDADDQ-HPPELIP 102 (291)
T ss_pred HHHHhhhcceEEEeecc-----cCCChHHHHHhhHHh----ccCCEEEEEccCCC-CCHHHHH
Confidence 2 2111234443332 247999999999997 57799999999999 6555444
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=97.96 E-value=5e-05 Score=77.83 Aligned_cols=112 Identities=18% Similarity=0.129 Sum_probs=79.3
Q ss_pred ceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhh-
Q 006553 94 GVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE- 172 (641)
Q Consensus 94 ~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~- 172 (641)
..+|+||+|||+.-+|.| +.+++..+-+ +|-. + . +...+|.|+|||+.|++.+.+
T Consensus 68 ~lsVIVpaynE~~ri~~m-----ldeav~~le~--ry~~----~-~------------~F~~eiiVvddgs~d~T~~~a~ 123 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAM-----LDEAVDYLEK--RYLS----D-K------------SFTYEIIVVDDGSTDSTVEVAL 123 (323)
T ss_pred eeEEEEecCCcccchHHH-----HHHHHHHHHH--Hhcc----C-C------------CCceeEEEeCCCCchhHHHHHH
Confidence 789999999999999888 6666655432 2321 1 1 122469999999999875431
Q ss_pred --c--CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCC--CCchHHHHHHHHHhh
Q 006553 173 --G--CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMY--ANDADAIREALCFFM 238 (641)
Q Consensus 173 --~--~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~--~~~p~~L~~~v~~f~ 238 (641)
. ...-+++++.-.+ +.||.||..-++-+ +.|+++++.|||.- .++-+.|.+++.--.
T Consensus 124 k~s~K~~~d~irV~~l~~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 124 KFSRKLGDDNIRVIKLKK-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred HHHHHcCcceEEEeehhc-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 1 1234677777655 36999999999987 69999999999963 336677887775443
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.48 E-value=0.00097 Score=71.50 Aligned_cols=155 Identities=10% Similarity=0.055 Sum_probs=93.3
Q ss_pred eEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHHhhhcC
Q 006553 95 VDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGC 174 (641)
Q Consensus 95 VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~~~ 174 (641)
+-|+|.|||-+.. ++++++++++. + | .. .+..|+|.+||+++++.+....
T Consensus 2 ~PVlv~ayNRp~~---------l~r~LesLl~~-~-p--------~~-----------~~~~liIs~DG~~~~~~~~v~~ 51 (334)
T cd02514 2 IPVLVIACNRPDY---------LRRMLDSLLSY-R-P--------SA-----------EKFPIIVSQDGGYEEVADVAKS 51 (334)
T ss_pred cCEEEEecCCHHH---------HHHHHHHHHhc-c-c--------cC-----------CCceEEEEeCCCchHHHHHHHh
Confidence 3588999996533 79999998762 1 2 10 1235999999998876554322
Q ss_pred CCCcEEEEEccCCCCCCCC----C-----hHH----HHHHHHHhcccCCCCCEEEEecCCCCCCchHHH---HHHHHHhh
Q 006553 175 QLPTLVYMAREKRPECPHN----F-----KAG----AMNALIRVSSEISNGPIILNLDCDMYANDADAI---REALCFFM 238 (641)
Q Consensus 175 ~~p~v~yv~R~krp~~~~~----~-----KAG----aLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L---~~~v~~f~ 238 (641)
....+.++.-++....+.+ . =|. |+|.++.. .++++++++|.|.++ .|||+ ++++..+.
T Consensus 52 ~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~aln~vF~~----~~~~~vIILEDDl~~-sPdFf~yf~~~l~~y~ 126 (334)
T cd02514 52 FGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWALTQTFNL----FGYSFVIILEDDLDI-APDFFSYFQATLPLLE 126 (334)
T ss_pred hccccEEEEcccccccccCcccccchhhHHHHHHHHHHHHHHHh----cCCCEEEEECCCCcc-CHhHHHHHHHHHHHHh
Confidence 1123556643221100101 0 033 88888875 479999999999999 79955 77887776
Q ss_pred cccCCceEEEEecCcccccCCcccccccc-hhhHHHHHHHhhhhcCCceecccceeEehhhhcC
Q 006553 239 DEKRGHEIAFVQHPQCFDIISENDLYGHY-NLVENQVELAGLGGYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 239 d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
+ +++|..|.+- |.+........ ...+| ...+++|.|-+.+|++..+
T Consensus 127 ~---D~~v~~ISa~----NdnG~~~~~~~~~~~ly----------rs~ff~glGWml~r~~W~e 173 (334)
T cd02514 127 E---DPSLWCISAW----NDNGKEHFVDDTPSLLY----------RTDFFPGLGWMLTRKLWKE 173 (334)
T ss_pred c---CCCEEEEEee----ccCCcccccCCCcceEE----------EecCCCchHHHHHHHHHHH
Confidence 4 3489988762 21111000000 11111 2346788888888888874
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.93 E-value=0.0013 Score=70.15 Aligned_cols=202 Identities=17% Similarity=0.156 Sum_probs=121.0
Q ss_pred ccCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChh
Q 006553 88 YEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTN 167 (641)
Q Consensus 88 ~~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~ 167 (641)
+++++|+++|.|.-+||.=.+ +.+|+.+.+. +-|... ..+|.++||-++.+
T Consensus 150 Ype~Lpt~SVviVFHNEGws~--------LmRTVHSVi~--RsP~~~-------------------l~eivlvDDfSdKe 200 (603)
T KOG3737|consen 150 YPENLPTSSVVIVFHNEGWST--------LMRTVHSVIK--RSPRKY-------------------LAEIVLVDDFSDKE 200 (603)
T ss_pred CcccCCcceEEEEEecCccHH--------HHHHHHHHHh--cCcHHh-------------------hheEEEeccCCccH
Confidence 478899999999999999876 7789999875 344321 13466667766644
Q ss_pred -HHhhh---cCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCC
Q 006553 168 -AVDNE---GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRG 243 (641)
Q Consensus 168 -~~~~~---~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~ 243 (641)
..+.+ -...-+++-|-|.++. .|--.|-.-+.. .+.|+.++.+||-+-+ +-++|--++..... +
T Consensus 201 hLkekLDeYv~~fnGlVkV~Rne~R----EGLI~aRSiGA~----~atGeV~ifLDAHCEV-ntNWlpPLlAPI~r---d 268 (603)
T KOG3737|consen 201 HLKEKLDEYVKLFNGLVKVFRNERR----EGLIQARSIGAQ----KATGEVLIFLDAHCEV-NTNWLPPLLAPISR---D 268 (603)
T ss_pred HHHHHHHHHHHHhcCEEEEEecchh----hhhhhhhccchh----hccccEEEEEecceee-eccccccccccccc---C
Confidence 43322 1234567777776541 122112112222 3689999999999999 57777665544431 2
Q ss_pred ceEEEEecCcccccCCccc-----ccccchh---hHHHH------------HHHhhh----hcCCceecccceeEehhhh
Q 006553 244 HEIAFVQHPQCFDIISEND-----LYGHYNL---VENQV------------ELAGLG----GYDAAMYCGTACFHRRDSL 299 (641)
Q Consensus 244 ~~va~VQ~pq~f~n~~~~d-----~~~~~~~---~~~~~------------~~~g~d----~~~~~~~~Gtg~~~RR~aL 299 (641)
..|.-| ...++++.|. .|+..+. -.|+. .++-+. -..+|-..|.-|++.|+-+
T Consensus 269 RtvmTV---P~IDgId~n~~EyrpvyG~dn~h~rGifeWgmLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F 345 (603)
T KOG3737|consen 269 RTVMTV---PLIDGIDGNTYEYRPVYGGDNDHARGIFEWGMLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFF 345 (603)
T ss_pred ceEEEE---eeeeeecCCceEEeeccCCcchhhcchhhhhheeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHH
Confidence 344433 2334444432 2333332 12221 112221 1235667888889999988
Q ss_pred cCcccccccccccccccccccchHHHHHhhhhhhccccccC-CCccccccccCCCccchHHHHHHHHHcCCeEEEeC
Q 006553 300 SGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKD-TQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYN 375 (641)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~-t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 375 (641)
.+ +| -|..+ -.|| .|.+++++++-.-|-++.|++
T Consensus 346 ~E-----------------------LG---------~YDpgLqiWG----------GEnfElSfKIWQCGG~i~fVP 380 (603)
T KOG3737|consen 346 FE-----------------------LG---------LYDPGLQIWG----------GENFELSFKIWQCGGKILFVP 380 (603)
T ss_pred HH-----------------------hc---------cCCCcceeec----------CcceeEEEEEEeeCCEEEEEE
Confidence 74 55 34333 2465 478889999988888888886
No 77
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.16 E-value=0.0054 Score=69.75 Aligned_cols=216 Identities=16% Similarity=0.178 Sum_probs=131.2
Q ss_pred cCCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhH
Q 006553 89 EEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNA 168 (641)
Q Consensus 89 ~~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~ 168 (641)
.+.+|+++|+|+-+||...+ +.++|-+..+ .-|.. ...+|.++||.++.+-
T Consensus 138 ~~~Lp~~Svii~f~nE~~s~--------llRtv~Svi~--rtp~~-------------------lLkEIiLVdD~S~~~~ 188 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHNEAWST--------LLRTVHSVIN--RTPPY-------------------LLKEIILVDDFSDRDH 188 (578)
T ss_pred ccccCCCceEEEEecCCCcc--------hhheEEeehc--cCChh-------------------HeEEEEEeecCcchhh
Confidence 45699999999999999886 5666665553 22321 1246888999987542
Q ss_pred -H---hhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCc
Q 006553 169 -V---DNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGH 244 (641)
Q Consensus 169 -~---~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~ 244 (641)
. |+.-++...+++++.++| .|+-.|.+.|-+. +.||+++.+||-.-+ +..+|+-++.-.....
T Consensus 189 l~~~Ld~y~k~~~~v~i~r~~~R-----~GLIrARl~GA~~----A~geVL~FLDsHcE~-n~gWLePLL~~I~~~r--- 255 (578)
T KOG3736|consen 189 LKDKLEEYVKRFSKVRILRTKKR-----EGLIRARLLGASM----ATGEVLTFLDSHCEV-NVGWLEPLLARIAEDR--- 255 (578)
T ss_pred hhhhhHHHHhhhcceeEEeecch-----hhhHHHHhhhhhh----hhchheeeeecceeE-ecCcchHHHHHhhhcC---
Confidence 1 222223445777777665 5888888888885 799999999999999 5889998887765321
Q ss_pred eEEEEecCcccccCCccc-cccc---------chhhHHH--------HHHHhh--hhcCCceecccceeEehhhhcCccc
Q 006553 245 EIAFVQHPQCFDIISEND-LYGH---------YNLVENQ--------VELAGL--GGYDAAMYCGTACFHRRDSLSGAKY 304 (641)
Q Consensus 245 ~va~VQ~pq~f~n~~~~d-~~~~---------~~~~~~~--------~~~~g~--d~~~~~~~~Gtg~~~RR~aL~~~~~ 304 (641)
-. |-+|- ...++.+. .|.. .....|. ..++.. +-...|...|.-+++.|+-+.
T Consensus 256 -~t-vv~Pv-ID~Id~~tf~y~~~~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~---- 328 (578)
T KOG3736|consen 256 -KT-VVCPV-IDVIDDNTFEYEKQSELMRGGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFG---- 328 (578)
T ss_pred -ce-eecce-EEeecCcCceecccCccceeeeecceeEEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHh----
Confidence 11 11221 12222111 0100 0111111 111122 234567788999999999887
Q ss_pred ccccccccccccccccchHHHHHhhhhhhccccccC-CCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCC--Ccc
Q 006553 305 SYDCRNINEARNKDKRSVDELEKASKVLASCSYEKD-TQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPER--PAF 381 (641)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~-t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~--~a~ 381 (641)
|+| +|..+ -.|| .|-+++|+|+=.=|-+..-+|-.+ -.|
T Consensus 329 -------------------eiG---------~yD~gMdiwG----------GENlElSfrvWqCGG~lei~PCSrVGHif 370 (578)
T KOG3736|consen 329 -------------------ELG---------SYDEGMDIWG----------GENLELSFRVWQCGGRLEIVPCSRVGHIF 370 (578)
T ss_pred -------------------hcc---------CccccccccC----------hhhceeeEEEeccCCeEEecCccceeeee
Confidence 477 34433 2344 378888988888777766554322 234
Q ss_pred cccCCCCHHH
Q 006553 382 LGLAPVTLDN 391 (641)
Q Consensus 382 ~g~aP~tl~~ 391 (641)
....|-+..+
T Consensus 371 Rk~~pY~~p~ 380 (578)
T KOG3736|consen 371 RKRKPYTFPD 380 (578)
T ss_pred ecCCCccCCC
Confidence 4556665544
No 78
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=94.15 E-value=0.51 Score=47.76 Aligned_cols=141 Identities=14% Similarity=0.116 Sum_probs=81.4
Q ss_pred ChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCcccccCCcccccccchhhHHH
Q 006553 194 FKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQ 273 (641)
Q Consensus 194 ~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~ 273 (641)
-||-.||.|...+....+.++++.-|.|.+| ..+..... | + +.|..+.-.- +.+ .....|
T Consensus 49 NR~~llNvG~~~a~k~~~~dc~i~hDVDllP-~~~~~~y~-~---~----------~~p~H~s~~~--~~~--~~~lpy- 108 (219)
T cd00899 49 NRAKLLNVGFLEALKDGDWDCFIFHDVDLLP-ENDRNLYG-C---E----------EGPRHLSVPL--DKF--HYKLPY- 108 (219)
T ss_pred hhhhhhhHHHHHHhhcCCccEEEEecccccc-cCcccccc-C---C----------CCCeEEEEee--ccc--ccccCc-
Confidence 4788999977765323457999999999999 55543311 1 1 2222221000 000 001111
Q ss_pred HHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhccccccCCCccccccccCCC
Q 006553 274 VELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGY 353 (641)
Q Consensus 274 ~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~s 353 (641)
.-+.|.+..++|+.+.. |+ ||.+ ..| ||-
T Consensus 109 -----------~~~~Gg~~~~~k~~f~~-----------------------VN---------Gf~n-~f~----GWG--- 137 (219)
T cd00899 109 -----------KTYFGGVLALTREQFRK-----------------------VN---------GFSN-AYW----GWG--- 137 (219)
T ss_pred -----------ccccccceeeEHHHHHH-----------------------hC---------CcCC-cCc----cCC---
Confidence 12466688899998884 65 3332 223 442
Q ss_pred ccchHHHHHHHHHcCCeEEEeCCCCC----c------ccccCCCCHHHHHHHHhhhccchhhH
Q 006553 354 AVEDVVTGLTIQCRGWKSMHYNPERP----A------FLGLAPVTLDNSLVQIKRWSEGLFQI 406 (641)
Q Consensus 354 vtED~~t~~~l~~~Gwrs~y~~~~~~----a------~~g~aP~tl~~~~~Qr~RWa~G~lqi 406 (641)
.||-+.+.||...|.+......... . -....|.-+.....+++||+...+.-
T Consensus 138 -gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLns 199 (219)
T cd00899 138 -GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNS 199 (219)
T ss_pred -cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccc
Confidence 5999999999999988765542111 0 01234455666677888887766654
No 79
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=93.71 E-value=2.2 Score=50.75 Aligned_cols=188 Identities=17% Similarity=0.146 Sum_probs=107.3
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecC--CCCCCchH-HHHHHHHHhhcccC--------------CceEEEEecCccc
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDC--DMYANDAD-AIREALCFFMDEKR--------------GHEIAFVQHPQCF 255 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDA--D~~~~~p~-~L~~~v~~f~d~~~--------------~~~va~VQ~pq~f 255 (641)
.||..|-|+|+=- +.||++-.+|+ |++. +.. =+|.++.-|.+... .+.+++|-++-+.
T Consensus 274 eGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYl-eE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~I 348 (817)
T PF02364_consen 274 EGKPENQNHAIIF----TRGEYLQTIDMNQDNYL-EEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHI 348 (817)
T ss_pred CCCccccceeEEE----EccccccccccchhhhH-HHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceE
Confidence 7899999999974 89999999998 4444 111 12344445543211 3457777776654
Q ss_pred ccCCcc---cccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhh
Q 006553 256 DIISEN---DLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVL 332 (641)
Q Consensus 256 ~n~~~~---d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v 332 (641)
...+-. |..+.+...|--..|+-+...++-+.-|.==++.|--... =||.++
T Consensus 349 Fs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~T-----------------------RGGvSK-- 403 (817)
T PF02364_consen 349 FSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMTT-----------------------RGGVSK-- 403 (817)
T ss_pred ecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhheec-----------------------cCccch--
Confidence 332221 2223333344344555555444445555555554443332 111110
Q ss_pred hccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCC-CCHHHHHHHHhhhccchhhHHhhcc
Q 006553 333 ASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAP-VTLDNSLVQIKRWSEGLFQIFFSKY 411 (641)
Q Consensus 333 ~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP-~tl~~~~~Qr~RWa~G~lqi~~~~~ 411 (641)
|+ -|- +++||+..|+...+||-++.+|.--. .|-.- -.+.+-..=-.+=+.|+-|..+||.
T Consensus 404 As------------k~l---hLsEDIfaG~n~~lRGG~i~h~ey~q---cGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe 465 (817)
T PF02364_consen 404 AS------------KGL---HLSEDIFAGMNATLRGGRIKHCEYIQ---CGKGRDVGFNSILNFETKIASGMGEQMLSRE 465 (817)
T ss_pred Hh------------hcc---cccHHHHHHHHHHhcCCceeehhhhh---cccccccCchhhhhhHhHhcCCccchhhhHH
Confidence 00 022 78999999999999999999997422 34332 3344445555677888888888863
Q ss_pred cccccccCCCCcchhhhhh
Q 006553 412 CPFIYGYGKIKLGARMGYC 430 (641)
Q Consensus 412 ~p~~~~~~~l~~~qrl~y~ 430 (641)
---+ ..++.+.+-+.+.
T Consensus 466 ~yrL--g~~ld~~R~LSfy 482 (817)
T PF02364_consen 466 YYRL--GTRLDFFRFLSFY 482 (817)
T ss_pred HHHh--hccCCHHHHHHHH
Confidence 2122 2456666655444
No 80
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=93.45 E-value=0.19 Score=43.56 Aligned_cols=65 Identities=22% Similarity=0.178 Sum_probs=43.5
Q ss_pred eEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCC
Q 006553 156 IVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYAN 225 (641)
Q Consensus 156 ~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~ 225 (641)
.++|+||+++|.+.+.+. +++++..+.... |-.....+...+|...+. ..+++.++.+|||-+..
T Consensus 21 ~i~i~d~~s~D~t~~~l~-~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~---~~~~dWvl~~D~DEfl~ 85 (97)
T PF13704_consen 21 HIYIYDDGSTDGTREILR-ALPGVGIIRWVD-PYRDERRQRAWRNALIER---AFDADWVLFLDADEFLV 85 (97)
T ss_pred EEEEEECCCCccHHHHHH-hCCCcEEEEeCC-CccchHHHHHHHHHHHHh---CCCCCEEEEEeeeEEEe
Confidence 489999999998876654 357777776654 221122344455555553 25789999999998873
No 81
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=93.27 E-value=0.22 Score=53.75 Aligned_cols=109 Identities=10% Similarity=0.067 Sum_probs=75.5
Q ss_pred CCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChh-H
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTN-A 168 (641)
Q Consensus 90 ~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~-~ 168 (641)
.++|.-+|+|+-+||...- +-+||.++++ +-|++. ..+|+++||++.|- .
T Consensus 121 ~dlp~TsviITfHNEARS~--------LLRTv~Svln--rsP~~l-------------------i~EiILVDD~S~Dped 171 (559)
T KOG3738|consen 121 VDLPPTSVIITFHNEARST--------LLRTVVSVLN--RSPEHL-------------------IHEIILVDDFSQDPED 171 (559)
T ss_pred cCCCCceEEEEeccHHHHH--------HHHHHHHHHc--CChHHh-------------------hheeEEecCCCCChHH
Confidence 4789999999999998774 7889999885 456432 13578889988764 2
Q ss_pred HhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006553 169 VDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM 238 (641)
Q Consensus 169 ~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~ 238 (641)
.+.+. +.|+++.++-.+| .|---.-|.|.. .+.+.++..+|+-.-+ +.++|+-++.-..
T Consensus 172 ~~~L~-ri~kvr~LRN~~R-----eGLirSRvrGAd----vA~a~vltFLDSHcEv-N~~WLePLL~Rva 230 (559)
T KOG3738|consen 172 GKLLK-RIPKVRVLRNNER-----EGLIRSRVRGAD----VAQATVLTFLDSHCEV-NEGWLEPLLERVA 230 (559)
T ss_pred HHHHh-hhheeeeecccch-----hhhhhhhccccc----cccceEEEEEecceee-cchhhHHHHHHHh
Confidence 33333 5777777543332 222222233333 3689999999999999 5889998887665
No 82
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=85.33 E-value=1.5 Score=44.34 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=38.7
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHh-hcccCCceEEEE
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFF-MDEKRGHEIAFV 249 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f-~d~~~~~~va~V 249 (641)
..-|-+.|.|++. ++++|++.+.-|..+.+++++.+++..| .|| ++|++
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 4677799999996 7999999999999998899999999999 665 56655
No 83
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=81.17 E-value=9.4 Score=41.32 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=59.6
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEecCccccc-----CC---cccc
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDI-----IS---ENDL 263 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n-----~~---~~d~ 263 (641)
++||+-.|=-|+-.+. ....+||-.+|||.++ |.+..+-+.-|.- ..++-|+|...-- .+ .+..
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yAA-----Gf~ma~spytMVRi~W~~KPKv~~~~l 213 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYAA-----GFLMAESPYTMVRIHWRYKPKVTEDRL 213 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHHh-----hhcccCCCCceEEEEecCCCceecCeE
Confidence 5788888876665432 3577999999999999 6788777665542 2334444432111 11 1222
Q ss_pred c----ccchhh---HHHHHHHhhhhcCCce-ecccce--eEehhhhcCcccc
Q 006553 264 Y----GHYNLV---ENQVELAGLGGYDAAM-YCGTAC--FHRRDSLSGAKYS 305 (641)
Q Consensus 264 ~----~~~~~~---~~~~~~~g~d~~~~~~-~~Gtg~--~~RR~aL~~~~~~ 305 (641)
| |.-.++ +.+...+...+...++ -+|++. +.+|+.++..+++
T Consensus 214 yF~k~GRvSel~nr~LN~l~~~~~gf~t~li~TGNAGEhAmt~~La~~l~f~ 265 (393)
T PRK14503 214 YFRKWGRVSEITNRYLNQLISEYTGFETDIIKTGNAGEHAMTMKLAEIMPFS 265 (393)
T ss_pred EEecCcchhHHHHHHHHHHHhhhccccccceecCCchhhHhhHHHHHhCCCC
Confidence 2 221222 2223345555555554 366555 6788888765543
No 84
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=80.38 E-value=10 Score=40.76 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=32.9
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM 238 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~ 238 (641)
++||+-.|=-|+-.+. ....+||-.+|||.++ |.+..+-+.-|.
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yA 184 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYA 184 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHH
Confidence 5789888876665432 3577999999999999 577777666554
No 85
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=78.27 E-value=10 Score=41.08 Aligned_cols=44 Identities=20% Similarity=0.151 Sum_probs=29.2
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM 238 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~ 238 (641)
++||+-.|=-|+-.+. ....+||-.+|||.+. |.+..+-+.-|.
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~yA 184 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDYA 184 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHHH
Confidence 5789988887766532 3677999999999999 778777665443
No 86
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=77.45 E-value=31 Score=38.62 Aligned_cols=160 Identities=13% Similarity=0.123 Sum_probs=75.5
Q ss_pred CCCCceEEEEecCCCCCCChhhhhhHHHHHHHHHHHhcCCCcHHHHhhccCccccccccccCCCcceEEEEecCCChhHH
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV 169 (641)
Q Consensus 90 ~~~P~VdV~Ipt~nE~~e~p~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~~~~w~~~~~~~~h~~~I~VldD~~~~~~~ 169 (641)
...|.+-|+|-+||-+.. ++++++++++.. |. ... ..|.|-.||..+++.
T Consensus 90 ~~~~~~pVlV~AcNRp~y---------l~r~L~sLl~~r--p~-----------------~~~--fpIiVSQDg~~~~~~ 139 (434)
T PF03071_consen 90 NKEPVIPVLVFACNRPDY---------LRRTLDSLLKYR--PS-----------------AEK--FPIIVSQDGDDEEVA 139 (434)
T ss_dssp -------EEEEESS-TT----------HHHHHHHHHHH---S------------------TTT--S-EEEEE-TT-HHHH
T ss_pred cCCCcceEEEEecCCcHH---------HHHHHHHHHHcC--CC-----------------CCC--ccEEEEecCCcHHHH
Confidence 356788899999997765 799999998621 21 001 238899999988765
Q ss_pred hhhcCCCCcEEEEEccCC-C--CCCCCCh-------HH----HHHHHHHhcccCCCCCEEEEecCCCCCCchHHHH---H
Q 006553 170 DNEGCQLPTLVYMAREKR-P--ECPHNFK-------AG----AMNALIRVSSEISNGPIILNLDCDMYANDADAIR---E 232 (641)
Q Consensus 170 ~~~~~~~p~v~yv~R~kr-p--~~~~~~K-------AG----aLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~---~ 232 (641)
+....-...+.|+..... + ..+.+.| |. |||..+.. -+.+.++|+.-|..+ .|||+. +
T Consensus 140 ~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~y~~IA~HYk~aL~~vF~~----~~~~~vIIlEDDL~i-sPDFf~Yf~~ 214 (434)
T PF03071_consen 140 EVIKSYGDQVTYIQHPDFSPITIPPKEKKFKGYYKIARHYKWALSQVFNK----FKYSSVIILEDDLEI-SPDFFEYFSA 214 (434)
T ss_dssp HHHHGGGGGSEEEE-S--S-----TT-GGGHHHHHHHHHHHHHHHHHHHT----S--SEEEEEETTEEE--TTHHHHHHH
T ss_pred HHHHHhhhhheeeecCCcCCceeCcccccccchHHHHHHHHHHHHHHHHh----cCCceEEEEecCccc-CccHHHHHHH
Confidence 442210124666654311 0 0011111 11 24444432 367899999999999 799976 3
Q ss_pred HHHHhhcccCCceEEEEecCcccccCCcccccccc--hhhHHHHHHHhhhhcCCceecccceeEehhhhcC
Q 006553 233 ALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHY--NLVENQVELAGLGGYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 233 ~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~--~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
+.+.+. .++.+-.|-+ .|.+....+... ....| ..-++.|=|=+.+|+.-++
T Consensus 215 ~~~ll~---~D~sl~ciSa----wNdnG~~~~~~~~~~~~ly----------RsdffpglGWml~r~~w~e 268 (434)
T PF03071_consen 215 TLPLLE---NDPSLWCISA----WNDNGKEHFVDDSRPSLLY----------RSDFFPGLGWMLTRELWDE 268 (434)
T ss_dssp HHHHHH---H-TTEEEEES------TT-BGGGS-TT-TT-EE----------EESS---SSEEEEHHHHHH
T ss_pred HHHHHh---cCCCeEEEEc----cccCCccccccCCCccceE----------ecccCCchHHHhhHHHHHh
Confidence 444443 2347887764 232221111111 11222 2345788899999998873
No 87
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=74.09 E-value=40 Score=35.20 Aligned_cols=83 Identities=18% Similarity=0.166 Sum_probs=46.5
Q ss_pred CCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceE-EEEecC
Q 006553 174 CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEI-AFVQHP 252 (641)
Q Consensus 174 ~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~v-a~VQ~p 252 (641)
..+|++.|+.-....... .-+---|+|...|-...++.+|+.+|+|.+. ..|-..+++..-.--+....+ |..--|
T Consensus 59 ~~~~~~~yl~~~s~~~F~--s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~-S~dnF~k~l~~~~ikk~~tnI~a~~vlP 135 (346)
T COG4092 59 DPMPRVLYLDFGSPEPFA--SETICANNGADYSHEKCESNLVLFLDVDCFG-SSDNFAKMLSIATIKKMRTNIDAPLVLP 135 (346)
T ss_pred ccccceEEEecCCCcccc--chhhhhhccchhhhccccccEEEEEeccccc-cHHHHHHHHHHHHHHHHHhccCcceeee
Confidence 357899999865421111 1133445666665445678999999999999 545445544322211111133 444456
Q ss_pred cccccCC
Q 006553 253 QCFDIIS 259 (641)
Q Consensus 253 q~f~n~~ 259 (641)
..+-|..
T Consensus 136 V~~LNk~ 142 (346)
T COG4092 136 VYHLNKA 142 (346)
T ss_pred eeecchh
Confidence 6665543
No 88
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=72.10 E-value=3.5 Score=34.80 Aligned_cols=22 Identities=18% Similarity=-0.099 Sum_probs=15.4
Q ss_pred cchHHHHHHHHHcCCeEEEeCC
Q 006553 355 VEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 355 tED~~t~~~l~~~Gwrs~y~~~ 376 (641)
-||.+...|+...|.++...+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 4999999999999998776543
No 89
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=69.86 E-value=82 Score=31.11 Aligned_cols=55 Identities=13% Similarity=0.141 Sum_probs=40.8
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006553 177 PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMD 239 (641)
Q Consensus 177 p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d 239 (641)
.++.++.++. ..+.++++-+++.... .+.+.+++++||+ .. +++.+.+++..+.+
T Consensus 62 ~~~~~~~~~~-----~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~-~~~~i~~l~~~~~~ 117 (229)
T cd02540 62 PNVEFVLQEE-----QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLI-TPETLQRLLEAHRE 117 (229)
T ss_pred CCcEEEECCC-----CCCCHHHHHHHHHhhc--cCCCeEEEEeCCcccc-CHHHHHHHHHHHHh
Confidence 3577776543 3578999999998631 1268899999999 45 57889998887764
No 90
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=68.95 E-value=31 Score=38.01 Aligned_cols=41 Identities=7% Similarity=0.036 Sum_probs=31.7
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553 195 KAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD 239 (641)
Q Consensus 195 KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d 239 (641)
....+-+|++.. +.|++++.|||+=.-+++.+++++..+.+
T Consensus 83 r~~SV~~gL~~l----~~d~VLVhdadrPfv~~e~I~~li~~~~~ 123 (378)
T PRK09382 83 RQESVRNALEAL----DSEYVLIHDAARPFVPKELIDRLIEALDK 123 (378)
T ss_pred HHHHHHHHHHhc----CCCeEEEeeccccCCCHHHHHHHHHHhhc
Confidence 566788888863 34999999999754479999999887754
No 91
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=68.57 E-value=40 Score=38.52 Aligned_cols=49 Identities=10% Similarity=0.184 Sum_probs=39.4
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHH
Q 006553 177 PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREA 233 (641)
Q Consensus 177 p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~ 233 (641)
.++.+++..+. .-.++.+|+.|.+.. .+.++++.+|-|+.. .++||.++
T Consensus 314 ~~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f-~~~fL~rc 362 (499)
T PF05679_consen 314 SRIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVF-TSDFLNRC 362 (499)
T ss_pred cceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCccc-CHHHHHHH
Confidence 36788877521 357899999999963 567899999999999 69999987
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=67.61 E-value=29 Score=40.95 Aligned_cols=44 Identities=25% Similarity=0.170 Sum_probs=33.5
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM 238 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~ 238 (641)
+.||+-.|=-|+-.+. ....+||-.+|||.++ |.+..+-+..|.
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~ya 189 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHFA 189 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHHH
Confidence 5789988877665432 4677999999999999 577777766554
No 93
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=59.76 E-value=48 Score=32.14 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=30.6
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFF 237 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f 237 (641)
.+|=..-...++.-+..-+.++++.+||.+.| .++.|-++...|
T Consensus 120 ~kKinSHrWfFnaf~~~l~P~vcvllDvGT~P-~~~siy~Lwkaf 163 (163)
T PF01644_consen 120 AKKINSHRWFFNAFCRQLQPNVCVLLDVGTKP-GKDSIYHLWKAF 163 (163)
T ss_pred ccccchhhHHHHHHHhhcCCcEEEEEecCCCc-CchHHHHHHhhC
Confidence 35544433444443445789999999999999 799998876543
No 94
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=59.36 E-value=13 Score=39.98 Aligned_cols=40 Identities=20% Similarity=0.221 Sum_probs=29.5
Q ss_pred CCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEE
Q 006553 209 ISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFV 249 (641)
Q Consensus 209 ~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~V 249 (641)
.+..++++++|+|++| .+++-++...+........+.++|
T Consensus 125 ~a~T~~v~~~DvD~~p-s~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 125 GARTDYVFLLDVDFLP-SPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred hcCcceEEEecceeee-CcchHHHHHHHhhhhccCCceEEE
Confidence 3689999999999999 688877776665533334466666
No 95
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=58.49 E-value=1.3e+02 Score=30.24 Aligned_cols=60 Identities=8% Similarity=-0.057 Sum_probs=43.6
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcccCCceEEEEec
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQH 251 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~ 251 (641)
.-+...++.++++......+.|+|++++||+=.-+++.+++++..|.+.+.+.-++.+..
T Consensus 75 ~~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 75 FTGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 456777888888753111346899999999988889999999999976434444555553
No 96
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=54.86 E-value=27 Score=36.11 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=21.9
Q ss_pred CCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006553 210 SNGPIILNLDCDMYANDADAIREALCFF 237 (641)
Q Consensus 210 t~g~~ililDAD~~~~~p~~L~~~v~~f 237 (641)
++.+.++.+|-|+++ ..+-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhC
Confidence 477999999999999 688888887766
No 97
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=54.65 E-value=68 Score=30.60 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=38.9
Q ss_pred cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006553 178 TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMD 239 (641)
Q Consensus 178 ~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d 239 (641)
++.++..++ + ..+-++++..|++. ..+.+.+++++||+ .. +++.+++++..+.+
T Consensus 63 ~v~~v~~~~-~---~~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 117 (188)
T TIGR03310 63 NITLVHNPQ-Y---AEGQSSSIKLGLEL---PVQSDGYLFLLGDQPFV-TPDIIQLLLEAFAL 117 (188)
T ss_pred CeEEEECcC-h---hcCHHHHHHHHhcC---CCCCCEEEEEeCCcCCC-CHHHHHHHHHHHHh
Confidence 577776543 1 24567778888872 24578999999999 45 68999999887753
No 98
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=50.78 E-value=1.5e+02 Score=32.84 Aligned_cols=72 Identities=8% Similarity=0.056 Sum_probs=45.9
Q ss_pred EEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHH
Q 006553 157 VQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALC 235 (641)
Q Consensus 157 I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~ 235 (641)
|.|+-....+...+..+. . ++.++.+++ ..+-++++-.++... .+.|.+++++||+ +. +++.+++++.
T Consensus 46 iiiv~~~~~~~i~~~~~~-~-~i~~~~~~~-----~~G~~~ai~~a~~~l---~~~~~~lv~~~D~p~i-~~~~~~~l~~ 114 (451)
T TIGR01173 46 IHVVYGHGAEQVRKALAN-R-DVNWVLQAE-----QLGTGHAVLQALPFL---PDDGDVLVLYGDVPLI-SAETLERLLE 114 (451)
T ss_pred EEEEECCCHHHHHHHhcC-C-CcEEEEcCC-----CCchHHHHHHHHHhc---CCCCcEEEEECCcCCc-CHHHHHHHHH
Confidence 444433333444444332 2 466665432 246788898888863 3457899999999 56 6888999888
Q ss_pred Hhhc
Q 006553 236 FFMD 239 (641)
Q Consensus 236 ~f~d 239 (641)
.+.+
T Consensus 115 ~~~~ 118 (451)
T TIGR01173 115 AHRQ 118 (451)
T ss_pred HHhh
Confidence 7754
No 99
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=49.27 E-value=98 Score=29.20 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=35.4
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMD 239 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d 239 (641)
..+-+.++..|++... .+.|.+++++||+ .. +++.+++++..+.+
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 118 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLV-TAETLRALIDAFRE 118 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCC-CHHHHHHHHHHHHh
Confidence 3577888999999742 1478999999999 56 68999999887753
No 100
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=48.58 E-value=54 Score=32.08 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=27.2
Q ss_pred HHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006553 197 GAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFF 237 (641)
Q Consensus 197 GaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f 237 (641)
.+++.+.++. .+.+|++-.|-|+++ +++-|.+.+.-.
T Consensus 69 ~~~~w~~~~c---~~~~~v~k~DDD~~v-n~~~l~~~L~~~ 105 (195)
T PF01762_consen 69 AGLKWASKHC---PNAKYVLKVDDDVFV-NPDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHhhC---CchhheeecCcEEEE-ehHHhhhhhhhc
Confidence 4677777763 568999999999999 577666554433
No 101
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=45.78 E-value=1.4e+02 Score=29.04 Aligned_cols=42 Identities=24% Similarity=0.244 Sum_probs=32.1
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
.+-++++-.++... +.+.+++++||++. +.+ +.+++.++.+.
T Consensus 81 ~g~~~al~~~~~~~----~~~~~lv~~~D~~~-~~~-~~~~~~~~~~~ 122 (217)
T cd04181 81 LGTAGAVRNAEDFL----GDDDFLVVNGDVLT-DLD-LSELLRFHREK 122 (217)
T ss_pred CccHHHHHHhhhhc----CCCCEEEEECCeec-CcC-HHHHHHHHHhc
Confidence 57789999998862 56789999999998 566 55566666554
No 102
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=42.40 E-value=1.6e+02 Score=28.56 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=31.5
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
..+.++++-.+++.. +.+.+++++||++. +++ +.+++..+.++
T Consensus 80 ~~G~~~~l~~a~~~~----~~~~~lv~~~D~~~-~~~-~~~~l~~~~~~ 122 (223)
T cd06915 80 PLGTGGAIKNALPKL----PEDQFLVLNGDTYF-DVD-LLALLAALRAS 122 (223)
T ss_pred CCcchHHHHHHHhhc----CCCCEEEEECCccc-CCC-HHHHHHHHHhC
Confidence 357888898888862 45678999999987 565 56677777543
No 103
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=41.22 E-value=1.8e+02 Score=30.28 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=34.1
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHH
Q 006553 177 PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALC 235 (641)
Q Consensus 177 p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~ 235 (641)
+++.++.-+. ..+-|+|+-.+........+.+.++++-+||+..+.+-+.+++.
T Consensus 73 ~~~~ii~ep~-----~~gTa~ai~~a~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l~ 126 (274)
T cd02509 73 PEENIILEPE-----GRNTAPAIALAALYLAKRDPDAVLLVLPSDHLIEDVEAFLKAVK 126 (274)
T ss_pred CCceEEECCC-----CCCcHHHHHHHHHHHHhcCCCCeEEEecchhcccCHHHHHHHHH
Confidence 5566665322 35678888877775421223579999999999954444444443
No 104
>PLN03153 hypothetical protein; Provisional
Probab=38.84 E-value=2.1e+02 Score=32.82 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=24.1
Q ss_pred CCCCCEEEEecCCCCCCchHHHHHHHHHhhcc
Q 006553 209 ISNGPIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 209 ~t~g~~ililDAD~~~~~p~~L~~~v~~f~d~ 240 (641)
..+.+-++++|.|++. .++-|.+.+.-+ |+
T Consensus 208 ~pd~kWfVf~DDDTyf-~~~NLv~~Ls~Y-Dp 237 (537)
T PLN03153 208 LPDVRWFVLGDDDTIF-NADNLVAVLSKY-DP 237 (537)
T ss_pred CCCCCEEEEecCCccc-cHHHHHHHHhhc-CC
Confidence 3688999999999999 477777777666 54
No 105
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=37.20 E-value=59 Score=33.43 Aligned_cols=79 Identities=10% Similarity=0.150 Sum_probs=43.7
Q ss_pred eEEEEecCCChhHHhhhcCCCC-cEEEEEccCCCCCCCCChHHH----HHHHHHhcccCCCCCEEEEecCCCCCCchHHH
Q 006553 156 IVQIIIDGRDTNAVDNEGCQLP-TLVYMAREKRPECPHNFKAGA----MNALIRVSSEISNGPIILNLDCDMYANDADAI 230 (641)
Q Consensus 156 ~I~VldD~~~~~~~~~~~~~~p-~v~yv~R~krp~~~~~~KAGa----LN~~l~~s~~~t~g~~ililDAD~~~~~p~~L 230 (641)
++.|+-.|...+..++.-.++| ....+.-+ +++-+| |=.|.++ -++. ++++|+|++- +|+++
T Consensus 48 e~vvV~~g~~~~lve~~l~~~~~~~~iv~N~-------~y~ktN~~~Sl~~akd~----~~~~-fii~~sD~vy-e~~~~ 114 (239)
T COG1213 48 EFVVVTNGYRADLVEEFLKKYPFNAKIVINS-------DYEKTNTGYSLLLAKDY----MDGR-FILVMSDHVY-EPSIL 114 (239)
T ss_pred eEEEEeccchHHHHHHHHhcCCcceEEEeCC-------CcccCCceeEEeeehhh----hcCc-EEEEeCCEee-cHHHH
Confidence 3555555566555544333455 55555322 222222 3334443 2344 7789999999 89999
Q ss_pred HHHHHHhhcccCCceEEEEecC
Q 006553 231 REALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 231 ~~~v~~f~d~~~~~~va~VQ~p 252 (641)
++++.-= ++.++.+-.|
T Consensus 115 e~l~~a~-----~~~li~d~~~ 131 (239)
T COG1213 115 ERLLEAP-----GEGLIVDRRP 131 (239)
T ss_pred HHHHhCc-----CCcEEEeccc
Confidence 9886421 3355555444
No 106
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=34.25 E-value=2.1e+02 Score=28.01 Aligned_cols=45 Identities=9% Similarity=0.034 Sum_probs=34.7
Q ss_pred ChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553 194 FKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD 239 (641)
Q Consensus 194 ~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d 239 (641)
+...++..|++... ..+.+.++++|||+=.-+++.+++++..+.+
T Consensus 79 ~~~~si~~al~~~~-~~~~~~vlv~~~D~P~i~~~~i~~li~~~~~ 123 (218)
T cd02516 79 TRQDSVLNGLKALP-DADPDIVLIHDAARPFVSPELIDRLIDALKE 123 (218)
T ss_pred HHHHHHHHHHHhcc-cCCCCEEEEccCcCCCCCHHHHHHHHHHHhh
Confidence 46778888888631 0257899999999875589999999998753
No 107
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=33.02 E-value=1.7e+02 Score=30.31 Aligned_cols=42 Identities=10% Similarity=-0.031 Sum_probs=30.1
Q ss_pred hHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006553 195 KAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM 238 (641)
Q Consensus 195 KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~ 238 (641)
..+.+-+|++.. ..+.++|++.|+|+=.-.++.+++++....
T Consensus 103 r~~SV~~gl~~l--~~~~~~VlihDaarP~vs~~~i~~li~~~~ 144 (252)
T PLN02728 103 RQDSVFNGLQEV--DANSELVCIHDSARPLVTSADIEKVLKDAA 144 (252)
T ss_pred hHHHHHHHHHhc--cCCCCEEEEecCcCCCCCHHHHHHHHHHHh
Confidence 355677777753 135689999999765547888888887654
No 108
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=31.64 E-value=2.4e+02 Score=31.06 Aligned_cols=69 Identities=14% Similarity=0.243 Sum_probs=39.7
Q ss_pred EEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHH
Q 006553 157 VQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREAL 234 (641)
Q Consensus 157 I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v 234 (641)
|.|+-....++..+..+...+++.|+..++ + ...+.+|++..+ + ...|.++++++|+..-+++.+++..
T Consensus 47 i~Ivv~~~~~~i~~~~~~~~~~v~~~~~~~-~--~~~gt~~al~~~-~-----~~~d~vlv~~gD~p~~~~~~l~~l~ 115 (430)
T PRK14359 47 VHVVLHHQKERIKEAVLEYFPGVIFHTQDL-E--NYPGTGGALMGI-E-----PKHERVLILNGDMPLVEKDELEKLL 115 (430)
T ss_pred EEEEECCCHHHHHHHHHhcCCceEEEEecC-c--cCCCcHHHHhhc-c-----cCCCeEEEEECCccCCCHHHHHHHH
Confidence 344333333444444433345677776432 2 134678888652 2 2467899999999432677777644
No 109
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=30.76 E-value=1.9e+02 Score=27.58 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=35.1
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMD 239 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d 239 (641)
..+-.+++-.|++.. +.+.+++++||+ .+ +++.+++++..+.+
T Consensus 72 ~~g~~~si~~al~~~----~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 115 (186)
T TIGR02665 72 FPGPLAGILAGLRWA----GTDWVLTVPCDTPFL-PEDLVARLAAALEA 115 (186)
T ss_pred CCCCHHHHHHHHHhc----CCCeEEEEecCCCcC-CHHHHHHHHHHhhc
Confidence 357788898899863 568999999999 66 79999999888753
No 110
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=29.74 E-value=1.3e+02 Score=30.02 Aligned_cols=78 Identities=15% Similarity=0.239 Sum_probs=49.3
Q ss_pred EEEEecCCChhHHhhhcCCC---CcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHH
Q 006553 157 VQIIIDGRDTNAVDNEGCQL---PTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREA 233 (641)
Q Consensus 157 I~VldD~~~~~~~~~~~~~~---p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~ 233 (641)
|.|+-....+...+..+... ..+.|+.-+. ..+-|+|+-.+........+.+.++++.+|++. +. -+.++
T Consensus 50 i~V~~~~~~~~i~~~~~~~~~~~~~i~~i~~~~-----~~Gta~al~~a~~~i~~~~~~~~~lv~~gD~i~-~~-~~~~~ 122 (248)
T PF00483_consen 50 IVVVNGYKEEQIEEHLGSGYKFGVKIEYIVQPE-----PLGTAGALLQALDFIEEEDDDEDFLVLNGDIIF-DD-DLQDM 122 (248)
T ss_dssp EEEEETTTHHHHHHHHTTSGGGTEEEEEEEESS-----SSCHHHHHHHTHHHHTTSEE-SEEEEETTEEEE-ST-THHHH
T ss_pred EEEEeecccccccccccccccccccceeeeccc-----ccchhHHHHHHHHHhhhccccceEEEEeccccc-cc-hhhhH
Confidence 56665444444433333221 1477776543 248999999999874211113469999999999 55 56888
Q ss_pred HHHhhccc
Q 006553 234 LCFFMDEK 241 (641)
Q Consensus 234 v~~f~d~~ 241 (641)
+.++.+..
T Consensus 123 l~~~~~~~ 130 (248)
T PF00483_consen 123 LEFHRESN 130 (248)
T ss_dssp HHHHHHHS
T ss_pred HHhhhccc
Confidence 88887653
No 111
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=29.67 E-value=1.8e+02 Score=28.07 Aligned_cols=43 Identities=12% Similarity=-0.001 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD 239 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d 239 (641)
.+-.+++..+++. .+.+.+++++||+-.-+++.+++++..+.+
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 116 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAGK 116 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhhc
Confidence 4556788888885 467999999999943379999999887653
No 112
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=28.48 E-value=4.7e+02 Score=24.02 Aligned_cols=65 Identities=14% Similarity=0.192 Sum_probs=45.8
Q ss_pred cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhcccCCceEEEEecC
Q 006553 178 TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMDEKRGHEIAFVQHP 252 (641)
Q Consensus 178 ~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 252 (641)
++.++.-+. ...+=+.++-.|++.. .+.+.++++-||+ .+ +++.+++++..+.+. +.+++++.++
T Consensus 59 ~~~~v~~~~----~~~G~~~sl~~a~~~~---~~~~~vlv~~~D~p~~-~~~~l~~l~~~~~~~--~~~i~~~~~~ 124 (160)
T PF12804_consen 59 GIKVVVDPE----PGQGPLASLLAALSQL---PSSEPVLVLPCDQPFL-SPELLRRLLEALEKS--PADIVVPVFR 124 (160)
T ss_dssp TSEEEE-ST----SSCSHHHHHHHHHHTS---TTSSEEEEEETTETTS--HHHHHHHHHHHHHT--TTSEEEEEET
T ss_pred CceEEEecc----ccCChHHHHHHHHHhc---ccCCCcEEEeCCcccc-CHHHHHHHHHHHhcc--CCcEEEEEEC
Confidence 466665432 1367888888888862 2789999999999 46 799999999988632 3467766654
No 113
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=28.37 E-value=2e+02 Score=29.14 Aligned_cols=73 Identities=8% Similarity=-0.003 Sum_probs=42.8
Q ss_pred eEEEEecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHH
Q 006553 156 IVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALC 235 (641)
Q Consensus 156 ~I~VldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~ 235 (641)
+|.|+.++..+.+.+.... ..+.++.-. .-.....-+||+... .+.++|++-||=-=.-.++.+.+++.
T Consensus 47 Ivvv~~~~~~~~~~~~~~~--~~v~iv~GG-------~tR~~SV~ngL~~l~--~~~d~VlIHDaaRPfv~~~~i~~~i~ 115 (221)
T PF01128_consen 47 IVVVVPPEDIDYVEELLSK--KKVKIVEGG-------ATRQESVYNGLKALA--EDCDIVLIHDAARPFVSPELIDRVIE 115 (221)
T ss_dssp EEEEESGGGHHHHHHHHHH--TTEEEEE---------SSHHHHHHHHHHCHH--CTSSEEEEEETTSTT--HHHHHHHHH
T ss_pred EEEEecchhHHHHHHhhcC--CCEEEecCC-------hhHHHHHHHHHHHHH--cCCCEEEEEccccCCCCHHHHHHHHH
Confidence 5666655544544433332 456766432 134455666776532 34499999998653336889999998
Q ss_pred Hhhc
Q 006553 236 FFMD 239 (641)
Q Consensus 236 ~f~d 239 (641)
...+
T Consensus 116 ~~~~ 119 (221)
T PF01128_consen 116 AARE 119 (221)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 114
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=28.03 E-value=3.6e+02 Score=29.83 Aligned_cols=53 Identities=13% Similarity=0.062 Sum_probs=38.4
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhcc
Q 006553 179 LVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMDE 240 (641)
Q Consensus 179 v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d~ 240 (641)
+.++.+++ ..+-++++.+++... .+.+.++++++|+ .. +++.+++++..+.+.
T Consensus 64 ~~~~~~~~-----~~g~~~ai~~a~~~l---~~~~~vlv~~gD~p~i-~~~~i~~l~~~~~~~ 117 (448)
T PRK14357 64 VKIFLQEE-----QLGTAHAVMCARDFI---EPGDDLLILYGDVPLI-SENTLKRLIEEHNRK 117 (448)
T ss_pred cEEEecCC-----CCChHHHHHHHHHhc---CcCCeEEEEeCCcccC-CHHHHHHHHHHHHhc
Confidence 55655432 347799999998863 2357899999998 45 577788898887643
No 115
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=27.90 E-value=3e+02 Score=26.99 Aligned_cols=40 Identities=15% Similarity=0.164 Sum_probs=29.5
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFM 238 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~ 238 (641)
.+-++++..++... +.+.++++.||++. +.++.+ ++..+.
T Consensus 82 ~g~~~~l~~~~~~~----~~~~~lv~~~D~i~-~~~~~~-~~~~~~ 121 (221)
T cd06422 82 LETGGGIKKALPLL----GDEPFLVVNGDILW-DGDLAP-LLLLHA 121 (221)
T ss_pred cccHHHHHHHHHhc----CCCCEEEEeCCeee-CCCHHH-HHHHHH
Confidence 46789999999873 33778899999998 677554 555554
No 116
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=27.83 E-value=3e+02 Score=26.96 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=38.6
Q ss_pred cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553 178 TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD 239 (641)
Q Consensus 178 ~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d 239 (641)
++..+..+. + ..|-.+++-.|++. .+.+.+++++||+-.-+++.+++++....+
T Consensus 67 ~~~~i~~~~-~---~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 120 (200)
T PRK02726 67 GCHWLREPP-P---SQGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLEN 120 (200)
T ss_pred CCeEecCCC-C---CCChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhhc
Confidence 455554432 2 24556778888885 356899999999987689999998887643
No 117
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=25.28 E-value=7.9e+02 Score=27.61 Aligned_cols=45 Identities=7% Similarity=0.067 Sum_probs=33.0
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMD 239 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d 239 (641)
.+-++++-.+++... ....+.+++++||+ .. +++.+++++..+..
T Consensus 81 ~Gt~~si~~al~~l~-~~~~~~vlV~~gD~P~~-~~~~l~~li~~~~~ 126 (482)
T PRK14352 81 PGTGHAVQCALEALP-ADFDGTVVVTAGDVPLL-DGETLADLVATHTA 126 (482)
T ss_pred CCcHHHHHHHHHHhc-cCCCCeEEEEeCCeecc-CHHHHHHHHHHHHh
Confidence 466888888888631 11246789999999 56 68889999887764
No 118
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=25.03 E-value=79 Score=40.07 Aligned_cols=199 Identities=17% Similarity=0.072 Sum_probs=101.5
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecC--CCCCCchHH-HHHHHHHhhccc-CCceEEEEecCcccccCCc---ccccc
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDC--DMYANDADA-IREALCFFMDEK-RGHEIAFVQHPQCFDIISE---NDLYG 265 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDA--D~~~~~p~~-L~~~v~~f~d~~-~~~~va~VQ~pq~f~n~~~---~d~~~ 265 (641)
.||..|-|+|+-- ++||++=.+|+ |++. +..+ +|.++.-|.... ....++++-...+....+- .+..+
T Consensus 1050 eGKpeNQNhaiiF----tRGE~iQtIDmNQDnYl-EE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms 1124 (1679)
T KOG0916|consen 1050 EGKPENQNHAIIF----TRGEAIQTIDMNQDNYL-EEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMS 1124 (1679)
T ss_pred CCCCcccCceeee----ecchhhheecccchHHH-HHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHc
Confidence 7899999999985 89999999997 4444 2211 334445554322 2234555555443222211 12223
Q ss_pred cchhhHHHHHHHhhhhcCC-ceecccceeEehhhhcCcccccccccccccccccccchHHHHHhhhhhhccccccCCCcc
Q 006553 266 HYNLVENQVELAGLGGYDA-AMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWG 344 (641)
Q Consensus 266 ~~~~~~~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG 344 (641)
++...|--.-|+-+...++ -+.-|.=-++.|-..-- =||..+ |+
T Consensus 1125 ~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~T-----------------------RGGvSK--As---------- 1169 (1679)
T KOG0916|consen 1125 GQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHIT-----------------------RGGVSK--AS---------- 1169 (1679)
T ss_pred cCccchhhHHHHHhccccceeeecCCCcHhhhhhhhc-----------------------cccchH--hh----------
Confidence 3333333334444444444 34555555555522210 011000 00
Q ss_pred ccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCC-CCHHHHHHHHhhhccchhhHHhhcccccccccCCCCc
Q 006553 345 REMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAP-VTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKL 423 (641)
Q Consensus 345 ~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP-~tl~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~ 423 (641)
-|. .++||+..|+....||-++.+|..-+ .|-.- -.+.+-..=-.+=+.|+=|-.+||.-=-+ | .++.+
T Consensus 1170 --k~i---nlsEDIfAG~n~tlRgG~itH~EYiQ---vGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL-G-~~ldf 1239 (1679)
T KOG0916|consen 1170 --KGI---NLSEDIFAGFNATLRGGNITHHEYIQ---VGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL-G-TQLDF 1239 (1679)
T ss_pred --ccc---ccchHhhhhhhHHhhCCCcccceeee---cccccccCcchhhhhhhhhcCCCcchhhhHHHHHh-c-ccccH
Confidence 122 68999999999999999998886311 12211 12222222334557787777777631111 2 34555
Q ss_pred chhh-hhhhhhhhhhhHHH
Q 006553 424 GARM-GYCNYLLWAPLSLP 441 (641)
Q Consensus 424 ~qrl-~y~~~~~~~~~~~~ 441 (641)
..-| +|..+.-++++++.
T Consensus 1240 fRmLSfyftt~GF~~n~m~ 1258 (1679)
T KOG0916|consen 1240 FRMLSFYFTTVGFYFNNMF 1258 (1679)
T ss_pred HHHHHHHhccccHHHHhHH
Confidence 5444 33333334455444
No 119
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=24.45 E-value=1.4e+02 Score=32.57 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=25.1
Q ss_pred HHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHH
Q 006553 197 GAMNALIRVSSEISNGPIILNLDCDMYANDADAIREA 233 (641)
Q Consensus 197 GaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~ 233 (641)
.+|+..++..+ ...+|+|++-|.|.+| +|+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEIP-~p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEIP-SPETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCccccc-CHHHHHHH
Confidence 44554444432 5678999999999999 68877644
No 120
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=24.44 E-value=5.3e+02 Score=28.73 Aligned_cols=54 Identities=13% Similarity=0.091 Sum_probs=39.1
Q ss_pred cEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006553 178 TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMD 239 (641)
Q Consensus 178 ~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d 239 (641)
.+.|+.+++ ..+-++++..+++... .+.|.++++++|+ .. .++.+++++..+..
T Consensus 69 ~i~~~~~~~-----~~Gt~~al~~a~~~l~--~~~~~vlv~~gD~p~~-~~~~i~~l~~~~~~ 123 (459)
T PRK14355 69 DVSFALQEE-----QLGTGHAVACAAPALD--GFSGTVLILCGDVPLL-RAETLQGMLAAHRA 123 (459)
T ss_pred ceEEEecCC-----CCCHHHHHHHHHHHhh--ccCCcEEEEECCccCc-CHHHHHHHHHHHHh
Confidence 566765432 2477899999988631 1247899999999 56 57888999988764
No 121
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=23.00 E-value=4.2e+02 Score=29.31 Aligned_cols=43 Identities=16% Similarity=-0.067 Sum_probs=31.8
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhh
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFM 238 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~ 238 (641)
.+-++++-.+++... .+.|.+++++||+ +. +++.+++++.++.
T Consensus 82 ~G~~~sl~~a~~~l~--~~~~~~lv~~~D~P~i-~~~~l~~l~~~~~ 125 (446)
T PRK14353 82 LGTAHAVLAAREALA--GGYGDVLVLYGDTPLI-TAETLARLRERLA 125 (446)
T ss_pred CCcHHHHHHHHHHHh--ccCCCEEEEeCCcccC-CHHHHHHHHHhHh
Confidence 467888888887531 1346688899999 67 6889999887654
No 122
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=22.45 E-value=1.1e+03 Score=26.19 Aligned_cols=162 Identities=15% Similarity=0.159 Sum_probs=84.1
Q ss_pred EEEEecCCChhHHh-----hhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHH
Q 006553 157 VQIIIDGRDTNAVD-----NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIR 231 (641)
Q Consensus 157 I~VldD~~~~~~~~-----~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~ 231 (641)
+.|+-..+.++++. ..+...+.+..+.-. ..-..|-||-.|-+.. .+.-++..+|-|.+. .-+||.
T Consensus 262 ~vv~f~~se~e~ak~e~~tslra~f~~~q~l~ln-----geFSRa~aL~vGAe~~---~~nvLLFfcDVDi~F-T~efL~ 332 (494)
T KOG3588|consen 262 SVVYFGYSEDEMAKRETITSLRASFIPVQFLGLN-----GEFSRAKALMVGAETL---NANVLLFFCDVDIYF-TTEFLN 332 (494)
T ss_pred EEEEecCCChHHHhhhHHHHHhhcCCceEEeccc-----chhhhhHHHHhhHHHh---ccceeEEEeccceee-hHHHHH
Confidence 33444445565433 233345666555432 2345777888888863 233467788999999 589998
Q ss_pred HHHHHhhcccCCceEEEEecCcccccCCcccccccchh--hHHHHHHHhhhhcCCceecccceeEehhhhcCcccccccc
Q 006553 232 EALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNL--VENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCR 309 (641)
Q Consensus 232 ~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~--~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~ 309 (641)
++- . +-..+++|- +|-.|.-.++.-.|+++.. .+.+....+..|.=--+=-|--|.+|-+.+.
T Consensus 333 rcr--~-Nt~~gkqiy---fPivFS~ynp~ivy~~~~~~p~e~~~~~~~~tGfwRdfGfGmtc~yrsd~~~--------- 397 (494)
T KOG3588|consen 333 RCR--L-NTILGKQIY---FPIVFSQYNPEIVYEQDKPLPAEQQLVIKKDTGFWRDFGFGMTCQYRSDFLT--------- 397 (494)
T ss_pred HHh--h-ccCCCceEE---EEEEEeecCcceeecCCCCCchhHheeeccccccccccCCceeEEeecccee---------
Confidence 762 2 222344443 3444433333333332211 1111111121221112224556777777665
Q ss_pred cccccccccccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeC
Q 006553 310 NINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYN 375 (641)
Q Consensus 310 ~~~~~~~~~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~ 375 (641)
|||. .. +-.||- .||+++--+-...|-+++=.+
T Consensus 398 ---------------vgGF---------D~-----~I~GWG----~EDV~Ly~K~v~~~l~viR~p 430 (494)
T KOG3588|consen 398 ---------------VGGF---------DM-----EIKGWG----GEDVDLYRKYVHSGLKVIRTP 430 (494)
T ss_pred ---------------ecCc---------ce-----eeeccC----cchHHHHHHHHhcCcEEEecC
Confidence 4421 00 002452 599999988888898876554
No 123
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=22.22 E-value=3.5e+02 Score=25.55 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006553 192 HNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFF 237 (641)
Q Consensus 192 ~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f 237 (641)
..+-.+++..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45778999999996 3578999999999433799999988777
No 124
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=21.16 E-value=6.6e+02 Score=27.79 Aligned_cols=44 Identities=11% Similarity=0.053 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHhcccCCCCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006553 193 NFKAGAMNALIRVSSEISNGPIILNLDCDM-YANDADAIREALCFFMD 239 (641)
Q Consensus 193 ~~KAGaLN~~l~~s~~~t~g~~ililDAD~-~~~~p~~L~~~v~~f~d 239 (641)
.+-++++-.++.... ...+.+++++||+ +. +++.+++++.++.+
T Consensus 76 ~g~~~al~~a~~~l~--~~~d~vlv~~~D~p~i-~~~~l~~li~~~~~ 120 (458)
T PRK14354 76 LGTGHAVMQAEEFLA--DKEGTTLVICGDTPLI-TAETLKNLIDFHEE 120 (458)
T ss_pred CCHHHHHHHHHHHhc--ccCCeEEEEECCcccc-CHHHHHHHHHHHHh
Confidence 467899998888631 1247899999998 56 68889999888754
No 125
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=20.78 E-value=9.1e+02 Score=24.68 Aligned_cols=75 Identities=15% Similarity=0.090 Sum_probs=47.1
Q ss_pred EEEEecCCChhH-H---hhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEe--cCCCCCCchHHH
Q 006553 157 VQIIIDGRDTNA-V---DNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNL--DCDMYANDADAI 230 (641)
Q Consensus 157 I~VldD~~~~~~-~---~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ilil--DAD~~~~~p~~L 230 (641)
..|+-|..-++. . +.+...+|+++.+.++. +....++..+++... ...+++++.+ |.|--+ +.||+
T Consensus 61 ~lv~~~~~~P~~~~~rL~~l~~~~p~~~i~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl-~~dFV 132 (234)
T PF11316_consen 61 WLVLFDDDLPEPYRERLRDLLADYPQFRIVFRPP------GPHRDAMRRAINAAR-RDGADPVLQFRLDDDDAL-HRDFV 132 (234)
T ss_pred EEEEECCCCCHHHHHHHHHHhccCCCcEEEecCC------chHHHHHHHHHhhhc-cCCCCEEEEEEECCcchh-hHHHH
Confidence 444444444442 2 22334578888887753 235567777774321 2345655555 999999 79999
Q ss_pred HHHHHHhhc
Q 006553 231 REALCFFMD 239 (641)
Q Consensus 231 ~~~v~~f~d 239 (641)
+++-.+..+
T Consensus 133 ~rlr~~a~~ 141 (234)
T PF11316_consen 133 ARLRRAAAD 141 (234)
T ss_pred HHHHHHHHh
Confidence 999888753
Done!