Query 006553
Match_columns 641
No_of_seqs 318 out of 1900
Neff 6.7
Searched_HMMs 29240
Date Tue Mar 26 18:09:49 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006553.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2182-2186//hhsearch_pdb/006553hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 1.0 1 1 446.7 48.0 485 17-616 64-577 (802)
2 2z86_A Chondroitin synthase; G 1.0 1 1 154.1 16.3 213 90-391 90-337 (625)
3 2d7i_A Polypeptide N-acetylgal 1.0 1 1 151.4 13.5 240 88-415 107-379 (570)
4 1xhb_A Polypeptide N-acetylgal 1.0 1 1 150.2 16.3 240 87-415 23-301 (472)
5 2ffu_A Ppgalnact-2, polypeptid 1.0 1 1 147.5 16.4 255 87-429 60-353 (501)
6 2z86_A Chondroitin synthase; G 1.0 1 1 142.9 13.1 220 91-407 373-598 (625)
7 1qg8_A Protein (spore coat pol 1.0 1 1 137.4 12.2 225 93-403 1-236 (255)
8 3l7i_A Teichoic acid biosynthe 1.0 1 1 136.0 0.0 192 92-376 1-199 (729)
9 3bcv_A Putative glycosyltransf 1.0 1 1 134.7 13.2 191 91-376 3-219 (240)
10 4fix_A UDP-galactofuranosyl tr 1.0 1 1 129.7 11.5 226 90-400 177-439 (657)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=1.00 E-value=1 Score=446.75 Aligned_cols=485 Identities=20% Similarity=0.270 Sum_probs=371.4
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHC-CCCCC-CC-HHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHCCCCC
Q ss_conf 769999-9999999999998742-57888-86-15899999999999999999996765013367861555431104999
Q 006553 17 FHRVYA-ATVFVGICLILNYRLV-NFPRG-GG-RRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKL 92 (641)
Q Consensus 17 ~~R~~~-~~~~~~~~~~l~~R~~-~l~~~-~~-~~~~~~~~~~~E~~~~~~w~l~~~~~~~p~~r~~~~~~l~~~~~~~~ 92 (641)
..|++. .+..++.+.|++||++ +++.. ++ +.+++++++++|+++.+.+++..+..++|..|.+.++. .+++.
T Consensus 64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~----~~~~~ 139 (802)
T 4hg6_A 64 VPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL----QPEEL 139 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC----CTTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC----CCCCC
T ss_conf 15789999999999999999866006775305899999999999999999999999998365678888989----85679
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH-
Q ss_conf 9328998258999998025656999999999995078868887311586433443345788452798762899168863-
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN- 171 (641)
Q Consensus 93 P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~~~~~- 171 (641)
|.|+|+||||||+.+. ++++++++.+ ++||++ ..+|.|+|||++|++.+.
T Consensus 140 P~VSViIPtyNe~~~l--------L~~~L~Sl~~-q~yp~~--------------------~~eIiVVDDgStD~T~~~~ 190 (802)
T 4hg6_A 140 PTVDILVPSYNEPADM--------LSVTLAAAKN-MIYPAR--------------------LRTVVLCDDGGTDQRCMSP 190 (802)
T ss_dssp CCEEEEEECTTCCHHH--------HHHHHHHHHT-SSCCTT--------------------CCEEEEESTTCHHHHHTCS
T ss_pred CCEEEEEEECCCCHHH--------HHHHHHHHHH-CCCCCC--------------------CEEEEEEECCCCCCCCCCC
T ss_conf 8489999979998999--------9999999984-669998--------------------2899999899876422348
Q ss_pred --------------H--CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
Q ss_conf --------------0--588994899990579999999808999999986156789988999569988896689999999
Q 006553 172 --------------E--GCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALC 235 (641)
Q Consensus 172 --------------~--~~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~ 235 (641)
. -.+..+++|+.|+++ +++|++|+|.+++. +++|+|+++|||+++ +|+++++++.
T Consensus 191 d~~i~~~~~~~~~~l~~~~~~~~v~~i~~~~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~-~pd~L~~lv~ 261 (802)
T 4hg6_A 191 DPELAQKAQERRRELQQLCRELGVVYSTRERN----EHAKAGNMSAALER----LKGELVVVFDADHVP-SRDFLARTVG 261 (802)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCEEEECSSC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEE-CTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC----CCCCHHHHHHHHHH----CCCCEEEEECCCCCC-CHHHHHHHHH
T ss_conf 87899998866699999998569479992688----77636899999996----599999999999881-8589999999
Q ss_pred HHH-CCCCCCEEEEEECCCCCCCCCC---C----CCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEHHHHCCCCCCCC
Q ss_conf 865-3359962999916741123786---6----3222202467888988642059800003434485364217646653
Q 006553 236 FFM-DEKRGHEIAFVQHPQCFDIISE---N----DLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 236 ~f~-d~~~~~~va~VQ~pq~f~n~~~---~----d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
.|. || ++++||+++.+.|.+. + ..+.++...++...+.+.+.+++++++|+++++||+++++
T Consensus 262 ~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~------ 331 (802)
T 4hg6_A 262 YFVEDP----DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDE------ 331 (802)
T ss_dssp HHHHSS----SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHH------
T ss_pred HHHCCC----CEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHH------
T ss_conf 984099----8599965679767855765444776516789999888875476438845426640324999997------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
Q ss_conf 21100001223103689999611110244445787662013458875652999999998598599719997721245899
Q 006553 308 CRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPV 387 (641)
Q Consensus 308 ~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~ 387 (641)
+| ||+.++++||.+++++++++||++.|+++ +.+++.+|+
T Consensus 332 -----------------vG---------------------gf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~ 371 (802)
T 4hg6_A 332 -----------------AG---------------------GFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPE 371 (802)
T ss_dssp -----------------HT---------------------TCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCC
T ss_pred -----------------CC---------------------CCCCCCCCHHHHHHHHHHHCCCEEEEECC--CEEEECCCC
T ss_conf -----------------08---------------------86788803099999999976995999368--879966888
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 98999997754402005677620465403468878001355432232244479999999755588860774234553145
Q 006553 388 TLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLW 467 (641)
Q Consensus 388 ~l~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~~~~~~~~ 467 (641)
++.++++||.||++|.+|+++.+ +|++ .+++++.+|++|+...++++.+++.++++++|+++++++++++......+
T Consensus 372 t~~~~~~Qr~RW~~G~~q~l~~~-~pl~--~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~ 448 (802)
T 4hg6_A 372 TFASFIQQRGRWATGMMQMLLLK-NPLF--RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEV 448 (802)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHS-CTTS--CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHH
T ss_pred CHHHHHHHHHHHHCCHHHHHHHH-CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 99999999999970089999885-9234--68998999999999999999999999999999999999678763389999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
Q ss_conf 89999999999999999999808750213323568887766779999999999994588888151878862145544442
Q 006553 468 FIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQ 547 (641)
Q Consensus 468 ~~~~~~~~~~~~~~~l~~~~~~G~s~~~ww~~qr~~~i~~~~~~~~a~~~~~l~~lg~~~~~F~VT~K~~~~~~~~~y~~ 547 (641)
+..+++.++.. .+......|.....||.. ++.+...++.+...+..++++++.+|+||+|+.+.+. .+
T Consensus 449 ~~~~lp~~l~~---~~~~~~~~~~~r~~~~~~-----l~~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~--~~-- 516 (802)
T 4hg6_A 449 LAYMPGYLAVS---FLVQNALFARQRWPLVSE-----VYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE--NY-- 516 (802)
T ss_dssp HHHHHHHHHHH---HHHHHHHHTTTSCTTHHH-----HHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS--CC--
T ss_pred HHHHHHHHHHH---HHHHHHHHCCCHHHHHHH-----HHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC--CC--
T ss_conf 99999999999---999999956747999999-----9999999999999999991888982027799765665--31--
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 221003230469999999999999999998887521432228999999999999999878787755202
Q 006553 548 EIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRR 616 (641)
Q Consensus 548 ~~~~f~~~~p~~~p~~~l~~l~l~a~~~gi~~~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~r~ 616 (641)
+ +++..|+..+++++++++++|+++.... .........+.+|+.++++.+.+.+.....|+
T Consensus 517 ----~---~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~ 577 (802)
T 4hg6_A 517 ----I---SPIYRPLLFTFLLCLSGVLATLVRWVAF-PGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQ 577 (802)
T ss_dssp ----B---CTTCHHHHHHHHHHHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCC
T ss_pred ----H---HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ----2---2689999999999999999999999606-77634200115999999999999999974588
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=154.12 Aligned_cols=213 Identities=13% Similarity=0.073 Sum_probs=142.4
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH
Q ss_conf 99993289982589999980256569999999999950788688873115864334433457884527987628991688
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAV 169 (641)
Q Consensus 90 ~~~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~~~ 169 (641)
...|.|+|+||||||+.. +..+++++.+ +.+|. +..|.|+||+++|++.
T Consensus 90 ~~~p~vsviIp~~n~~~~---------l~~~l~sl~~-q~~~~---------------------~~eiivvDd~s~d~t~ 138 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKI---------LAITLACLCN-QKTIY---------------------DYEVIVADDGSKENIE 138 (625)
T ss_dssp CCCCCEEEEEEESSCHHH---------HHHHHHHHHT-CCCSS---------------------CEEEEEEEESCSSCHH
T ss_pred CCCCCEEEEEECCCCHHH---------HHHHHHHHHH-HCCCC---------------------CEEEEEEECCCCHHHH
T ss_conf 469827999903885788---------9999999984-36579---------------------8699999679832079
Q ss_pred HHHC--CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 6305--88994899990579999999808999999986156789988999569988896689999999865335996299
Q 006553 170 DNEG--CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 170 ~~~~--~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
+... ...+++.|+.++++ .++|++|+|.+++. ++||+|+++|+|.++ .|++|.+++..|.+. +.++
T Consensus 139 ~~~~~~~~~~~i~~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~-~~~~l~~~~~~~~~~---~~~~ 206 (625)
T 2z86_A 139 EIVREFESLLNIKYVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAP-NPLWVQSYMELLAVD---DNVA 206 (625)
T ss_dssp HHHHTTTTTSCEEEEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEE-CTTHHHHHHHHHHHC---TTEE
T ss_pred HHHHHHHHCCCEEEEEECCC----CCCHHHHHHHHHHH----CCCCEEEEECCCCCC-CHHHHHHHHHHHHCC---CCEE
T ss_conf 99998563178299986787----74306899999986----884789997898777-979999999998559---8639
Q ss_pred EEECCCCCCCCCCCC-------CCCCC-HHH-----H-------------HHHHHH--HHHHCC--CCEECCCCEEEEHH
Q ss_conf 991674112378663-------22220-246-----7-------------888988--642059--80000343448536
Q 006553 248 FVQHPQCFDIISEND-------LYGHY-NLV-----E-------------NQVELA--GLGGYD--AAMYCGTACFHRRD 297 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d-------~~~~~-~~~-----~-------------~~~~~~--g~d~~~--~~~~~Gtg~~~RR~ 297 (641)
.++..+.+.+..... .+.+. ... + ...... ...... ..+++|+++++||+
T Consensus 207 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~ 286 (625)
T 2z86_A 207 LIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKK 286 (625)
T ss_dssp EECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETH
T ss_pred EEEEEEECCCCCCCHHHCCCCHHHHHHCCHHCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECEEEEEHH
T ss_conf 99855651674221222046467766340120577311333247764500343203431013677525885022555789
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHCCCEEEEE
Q ss_conf 421764665321100001223103689999611110244445787662013458875---65299999999859859971
Q 006553 298 SLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYA---VEDVVTGLTIQCRGWKSMHY 374 (641)
Q Consensus 298 aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~~~sv---tED~~t~~~l~~~Gwrs~y~ 374 (641)
++.+ +| ||+.... .||.++++|++.+||+..|+
T Consensus 287 ~l~~-----------------------iG---------------------gfde~~~~~g~ED~dl~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 287 WLFR-----------------------AG---------------------WFDEEFTHWGGEDNEFGYRLYREGCYFRSV 322 (625)
T ss_dssp HHHH-----------------------HC---------------------CCCTTCSSCCCHHHHHHHHHHHTTCEEEEC
T ss_pred HHHH-----------------------HC---------------------CCCCCCCCCCCCHHHHHHHHHHCCCEEEEC
T ss_conf 9997-----------------------07---------------------886303427842325654187579639974
Q ss_pred CCCCCCCCCCCCCCHHH
Q ss_conf 99977212458999899
Q 006553 375 NPERPAFLGLAPVTLDN 391 (641)
Q Consensus 375 ~~~~~a~~g~aP~~l~~ 391 (641)
+. +.++...|.+-..
T Consensus 323 p~--~~v~H~~~~~~~~ 337 (625)
T 2z86_A 323 EG--AMAYHQEPPGKEN 337 (625)
T ss_dssp GG--GCEEEECCC----
T ss_pred CC--CHHHCCCCCCCCC
T ss_conf 40--0212057842122
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=1.00 E-value=1 Score=151.42 Aligned_cols=240 Identities=15% Similarity=0.094 Sum_probs=155.4
Q ss_pred CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHH
Q ss_conf 04999932899825899999802565699999999999507886888731158643344334578845279876289916
Q 006553 88 YEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTN 167 (641)
Q Consensus 88 ~~~~~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~ 167 (641)
+.+..|.|+|+||+|||..+ .+.++|+++++ +++|. ...+|.|+||+++|.
T Consensus 107 ~~~~~P~vSVIIp~yNe~~~--------~L~~~L~Sll~-qt~~~--------------------~~~EIIVVDDgS~D~ 157 (570)
T 2d7i_A 107 YLETLPNTSIIIPFHNEGWS--------SLLRTVHSVLN-RSPPE--------------------LVAEIVLVDDFSDRE 157 (570)
T ss_dssp EESSCCCEEEEEEESSCCHH--------HHHHHHHHHHH-HSCGG--------------------GEEEEEEEECSCCCG
T ss_pred CCCCCCCEEEEEEECCCCHH--------HHHHHHHHHHH-CCCCC--------------------CCEEEEEEECCCCCH
T ss_conf 68889975999997898789--------99999999983-58745--------------------767999998999837
Q ss_pred H-HH---HHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 8-86---3058899489999057999999980899999998615678998899956998889668999999986533599
Q 006553 168 A-VD---NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRG 243 (641)
Q Consensus 168 ~-~~---~~~~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~ 243 (641)
+ .+ ....+.|++++++.+++ .++++|.|.+++. +.||+|+.+|+|..+ +|++|.+++..+.+..
T Consensus 158 tl~~~l~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~fLD~D~~~-~p~~L~~ll~~l~~~~-- 225 (570)
T 2d7i_A 158 HLKKPLEDYMALFPSVRILRTKKR-----EGLIRTRMLGASV----ATGDVITFLDSHCEA-NVNWLPPLLDRIARNR-- 225 (570)
T ss_dssp GGTHHHHHHHTTSTTEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEECCSSEEE-CTTCSHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHHCCEEEEEECCCC-----CCHHHHHHHHHHH----CCCCEEEEECCCCCC-CCCHHHHHHHHHHHCC--
T ss_conf 889999999974780899989988-----7989999999986----678889997598522-4038999999998489--
Q ss_pred CEEEEEECCCCCCCCCC-------CCCC-CC-CHHHHHHHHHH----H----HHHCCCCEECCCCEEEEHHHHCCCCCCC
Q ss_conf 62999916741123786-------6322-22-02467888988----6----4205980000343448536421764665
Q 006553 244 HEIAFVQHPQCFDIISE-------NDLY-GH-YNLVENQVELA----G----LGGYDAAMYCGTACFHRRDSLSGAKYSY 306 (641)
Q Consensus 244 ~~va~VQ~pq~f~n~~~-------~d~~-~~-~~~~~~~~~~~----g----~d~~~~~~~~Gtg~~~RR~aL~~~~~~~ 306 (641)
+++ |.....+.+.+. .... +. .....+..... . ......+...|.+.++||+++.+
T Consensus 226 -~~v-v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~----- 298 (570)
T 2d7i_A 226 -KTI-VCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE----- 298 (570)
T ss_dssp -TEE-EEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH-----
T ss_pred -CEE-EEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCCCEEEEEEHHHHHH-----
T ss_conf -779-8600302278754221566776554145433102045654454037775265455353689999999986-----
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHCCCEEEEECCCCCC--C
Q ss_conf 321100001223103689999611110244445787662013458875---65299999999859859971999772--1
Q 006553 307 DCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYA---VEDVVTGLTIQCRGWKSMHYNPERPA--F 381 (641)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~a--~ 381 (641)
+| ||+.+.. .||+++++|+...||+.+|++..... +
T Consensus 299 ------------------iG---------------------gfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~ 339 (570)
T 2d7i_A 299 ------------------LG---------------------GYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIY 339 (570)
T ss_dssp ------------------TT---------------------SSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred ------------------CC---------------------CCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEEC
T ss_conf ------------------58---------------------988766556711389999998579849973672899973
Q ss_pred CCCCCC-------CHHHHHHHHHHHCCCHHHHHHHCCCCCC
Q ss_conf 245899-------9899999775440200567762046540
Q 006553 382 LGLAPV-------TLDNSLVQIKRWSEGLFQIFFSKYCPFI 415 (641)
Q Consensus 382 ~g~aP~-------~l~~~~~Qr~RWa~G~~qi~~~~~~p~~ 415 (641)
.+..|. ......+...||.....+.++.+ .|..
T Consensus 340 r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~-~p~~ 379 (570)
T 2d7i_A 340 RKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-RPEY 379 (570)
T ss_dssp CSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT-CGGG
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCC
T ss_conf 366898887401667778999999889999999751-9210
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=1.00 E-value=1 Score=150.18 Aligned_cols=240 Identities=14% Similarity=0.096 Sum_probs=155.4
Q ss_pred HCCCCCCCEEEEEECCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 1049999328998258999-998025656999999999995078868887311586433443345788452798762899
Q 006553 87 RYEEKLPGVDILVCTADPI-LEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRD 165 (641)
Q Consensus 87 ~~~~~~P~VdV~I~t~nE~-~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~ 165 (641)
.++++.|.|+|+||+|||+ .. +.++|+++.+ +++|.. +.+|.|+||+++
T Consensus 23 ~~~~~~p~vSVIIp~yN~~~~~---------l~~~l~Sl~~-q~~~~~--------------------~~EIIvVDd~S~ 72 (472)
T 1xhb_A 23 VYPDNLPTTSVVIVFHNEAWST---------LLRTVHSVIN-RSPRHM--------------------IEEIVLVDDASE 72 (472)
T ss_dssp CCCSCCCCEEEEEEESSCCHHH---------HHHHHHHHHH-SSCGGG--------------------EEEEEEEECSCC
T ss_pred CCCCCCCCEEEEEEECCCCHHH---------HHHHHHHHHH-CCCHHH--------------------CEEEEEEECCCC
T ss_conf 5786799759999967887899---------9999999986-595767--------------------607999977999
Q ss_pred HH-HHH---HHCCCCC-CEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 16-886---3058899-489999057999999980899999998615678998899956998889668999999986533
Q 006553 166 TN-AVD---NEGCQLP-TLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDE 240 (641)
Q Consensus 166 ~~-~~~---~~~~~~p-~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~ 240 (641)
|. +.+ ....+.| +++++..+++ .++++|+|.+++. +.||+|+.+|+|..+ +|++|.+++..+.+.
T Consensus 73 d~~t~~~l~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~D~~~-~p~~L~~ll~~~~~~ 142 (472)
T 1xhb_A 73 RDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAHCEC-TAGWLEPLLARIKHD 142 (472)
T ss_dssp CGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESSEEE-CTTCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCC-----CCHHHHHHHHHHH----CCCCEEEEECCCEEE-CCCHHHHHHHHHHHC
T ss_conf 678999999999877985799988987-----8769999999986----158769998898576-734799999999839
Q ss_pred CCCCEEEEEECCCCCCCCCCC------CC-CCCC-HHHH-------HHHHH-HHHH---HCCCCEECCCCEEEEHHHHCC
Q ss_conf 599629999167411237866------32-2220-2467-------88898-8642---059800003434485364217
Q 006553 241 KRGHEIAFVQHPQCFDIISEN------DL-YGHY-NLVE-------NQVEL-AGLG---GYDAAMYCGTACFHRRDSLSG 301 (641)
Q Consensus 241 ~~~~~va~VQ~pq~f~n~~~~------d~-~~~~-~~~~-------~~~~~-~g~d---~~~~~~~~Gtg~~~RR~aL~~ 301 (641)
+.++.+... ...+.+.. .. .+.. .... ..... ...+ ....+...|.+.++||+++.+
T Consensus 143 ---~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~ 218 (472)
T 1xhb_A 143 ---RRTVVCPII-DVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQE 218 (472)
T ss_dssp ---TTEEEEEEE-EEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHH
T ss_pred ---CCEEEEEEE-EEECCCCCEECCCCCCCCCEEECCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHH
T ss_conf ---977999225-3176877432157875032330255133155897887303488777646851054457789999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 64665321100001223103689999611110244445787662013458875---652999999998598599719997
Q 006553 302 AKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYA---VEDVVTGLTIQCRGWKSMHYNPER 378 (641)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~ 378 (641)
+| ||+.+.. .||+++++|+...|++..+++...
T Consensus 219 -----------------------iG---------------------gfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~ 254 (472)
T 1xhb_A 219 -----------------------IG---------------------TYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSH 254 (472)
T ss_dssp -----------------------TT---------------------SCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEE
T ss_pred -----------------------CC---------------------CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCE
T ss_conf -----------------------28---------------------9997664668505889899985697599835738
Q ss_pred CC--CCCCCCC----C-----HHHHHHHHHHHCCCHHHHHHHCCCCCC
Q ss_conf 72--1245899----9-----899999775440200567762046540
Q 006553 379 PA--FLGLAPV----T-----LDNSLVQIKRWSEGLFQIFFSKYCPFI 415 (641)
Q Consensus 379 ~a--~~g~aP~----~-----l~~~~~Qr~RWa~G~~qi~~~~~~p~~ 415 (641)
.. .....|. . .....++..+|..+..+.++.+ .|..
T Consensus 255 v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~-~p~~ 301 (472)
T 1xhb_A 255 VGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII-SPGV 301 (472)
T ss_dssp EEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHT-STTG
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
T ss_conf 9998158688878853235788888999999889999988750-9443
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=1.00 E-value=1 Score=147.53 Aligned_cols=255 Identities=10% Similarity=0.075 Sum_probs=156.5
Q ss_pred HCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCH
Q ss_conf 10499993289982589999980256569999999999950788688873115864334433457884527987628991
Q 006553 87 RYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDT 166 (641)
Q Consensus 87 ~~~~~~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~ 166 (641)
.+..+.|.|+|+||+|||+... +.++|+++++ +++|. ...+|.|+||+++|
T Consensus 60 ~~~~~~p~vSVIIp~yN~~~~~--------L~~~l~Sl~~-q~~~~--------------------~~~EIIvVDDgS~D 110 (501)
T 2ffu_A 60 QWRVDLPATSVVITFHNEARSA--------LLRTVVSVLK-KSPPH--------------------LIKEIILVDDYSND 110 (501)
T ss_dssp CCCSSCCCEEEEEEESSCCHHH--------HHHHHHHHHH-HSCGG--------------------GEEEEEEEECSCSC
T ss_pred CCCCCCCCEEEEEEECCCCHHH--------HHHHHHHHHH-HCCHH--------------------HCEEEEEEECCCCC
T ss_conf 6786799779999969686899--------9999999985-08663--------------------35149999789995
Q ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 68863058899489999057999999980899999998615678998899956998889668999999986533599629
Q 006553 167 NAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEI 246 (641)
Q Consensus 167 ~~~~~~~~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~~~v 246 (641)
++.+....+.|++++++.+++ .++++|+|.+++. +.||+|+.+|+|..+ +|+.|.+++..+.+.. .
T Consensus 111 ~t~~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~flD~D~~~-~p~~L~~ll~~~~~~~---~- 176 (501)
T 2ffu_A 111 PEDGALLGKIEKVRVLRNDRR-----EGLMRSRVRGADA----AQAKVLTFLDSHCEC-NEHWLEPLLERVAEDR---T- 176 (501)
T ss_dssp THHHHGGGGBTTEEEEECSSC-----CHHHHHHHHHHHH----CCSSEEEECCSSEEE-CTTCHHHHHHHHHHCT---T-
T ss_pred HHHHHHHHCCCCEEEEECCCC-----CCHHHHHHHHHHH----CCCCEEEEECCCCCC-CCCHHHHHHHHHHHCC---C-
T ss_conf 678999841898799989988-----6889999998986----689889997798306-7207999999998399---7-
Q ss_pred EEEECCCCCCCCCC------C-CCCCCC-HHH-------HHHHHHHHH-H---HCCCCEECCCCEEEEHHHHCCCCCCCC
Q ss_conf 99916741123786------6-322220-246-------788898864-2---059800003434485364217646653
Q 006553 247 AFVQHPQCFDIISE------N-DLYGHY-NLV-------ENQVELAGL-G---GYDAAMYCGTACFHRRDSLSGAKYSYD 307 (641)
Q Consensus 247 a~VQ~pq~f~n~~~------~-d~~~~~-~~~-------~~~~~~~g~-d---~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 307 (641)
+.|.......+.+. . ...+.. ... ......... + ....+...|.+.++||+++..
T Consensus 177 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~------ 250 (501)
T 2ffu_A 177 RVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEE------ 250 (501)
T ss_dssp EEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHH------
T ss_pred EEEEEEECCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHH------
T ss_conf 69994053385887346057766332762067774453898898510379777644753121489998999997------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHCCCEEEEECCCCCC--CC
Q ss_conf 21100001223103689999611110244445787662013458875---65299999999859859971999772--12
Q 006553 308 CRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYA---VEDVVTGLTIQCRGWKSMHYNPERPA--FL 382 (641)
Q Consensus 308 ~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~a--~~ 382 (641)
+| ||+.+.. .||+++++++...|++..+++..... +.
T Consensus 251 -----------------iG---------------------gfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r 292 (501)
T 2ffu_A 251 -----------------LG---------------------KYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFR 292 (501)
T ss_dssp -----------------TT---------------------CCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred -----------------HC---------------------CCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEECC
T ss_conf -----------------48---------------------8885454667532899999986497499803758999825
Q ss_pred C----CCCCC-----HHHHHHHHHHHCCCHHHHHHHCCCCCCCC------CCCCCCCHHHHH
Q ss_conf 4----58999-----89999977544020056776204654034------688780013554
Q 006553 383 G----LAPVT-----LDNSLVQIKRWSEGLFQIFFSKYCPFIYG------YGKIKLGARMGY 429 (641)
Q Consensus 383 g----~aP~~-----l~~~~~Qr~RWa~G~~qi~~~~~~p~~~~------~~~l~~~qrl~y 429 (641)
. ..|.. .....+...+|..+..+.++++ .|.... ..++.+++++..
T Consensus 293 ~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~-~p~~~~~~~g~~~~r~~lr~~l~c 353 (501)
T 2ffu_A 293 KQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAA-VPSARNVPYGNIQSRLELRKKLSC 353 (501)
T ss_dssp SSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHH-CGGGGGCCCCCCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 7677768765206788888999999889999877634-853346874466889999985689
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=142.92 Aligned_cols=220 Identities=19% Similarity=0.124 Sum_probs=150.3
Q ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
Q ss_conf 99932899825899999802565699999999999507886888731158643344334578845279876289916886
Q 006553 91 KLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD 170 (641)
Q Consensus 91 ~~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~~~~ 170 (641)
..|.|+|+|||||++.. ++++|+++.+ ++|+. ..|.|+||++.|.+.+
T Consensus 373 ~~~~vsiii~~yn~~~~---------l~~~l~s~~~-q~~~~----------------------~eiivvdd~S~d~t~~ 420 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKY---------IVRCVESALN-QTITD----------------------LEVCICDDGSTDDTLR 420 (625)
T ss_dssp SSCSEEEEEEESSCTTT---------HHHHHHHHHS-SSCCS----------------------EEEEEEEESCSSSHHH
T ss_pred CCCEEEEEEECCCCHHH---------HHHHHHHHHH-CCCCC----------------------EEEEEEECCCCHHHHH
T ss_conf 59717999957898899---------9999999981-76998----------------------2899998969864999
Q ss_pred H---HCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 3---0588994899990579999999808999999986156789988999569988896689999999865335996299
Q 006553 171 N---EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 171 ~---~~~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
. .....|++.+++. + ..++++|+|.+++. ++||||+.+|+|.++ .|++|.+++..|.+. ++++
T Consensus 421 ~~~~~~~~~~~i~~~~~-~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~-~~~~l~~~~~~~~~~---~~~~ 486 (625)
T 2z86_A 421 ILQEHYANHPRVRFISQ-K-----NKGIGSASNTAVRL----CRGFYIGQLDSDDFL-EPDAVELCLDEFRKD---LSLA 486 (625)
T ss_dssp HHHHHHTTCTTEEEEEE-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCEE-CTTHHHHHHHHHHHC---TTCS
T ss_pred HHHHHHHHCCCEEEEEC-C-----CCCHHHHHHHHHHH----CCCCEEEEECCCCCC-CHHHHHHHHHHHHHC---CCEE
T ss_conf 99998854993899917-9-----88989999999985----677879998897662-835999999999847---9813
Q ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99167411237866322220246788898864205980000343448536421764665321100001223103689999
Q 006553 248 FVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEK 327 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ig~ 327 (641)
+|.+.....+.+............+ ..+.+....++|++.++||+++.. +|
T Consensus 487 ~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~r~~~~~-----------------------~g- 537 (625)
T 2z86_A 487 CVYTTNRNIDREGNLISNGYNWPIY-----SREKLTSAMICHHFRMFTARAWNL-----------------------TE- 537 (625)
T ss_dssp EEEEEEEEECTTSCEEEECCCCSSC-----CHHHHTTSCCCCSCEEEEHHHHTT-----------------------TT-
T ss_pred EEEEEEEEECCCCCEECCCCCCCCC-----CHHHHHHCCCCCCEEEEEHHHHHH-----------------------HC-
T ss_conf 9982048987999874167666657-----888985354677468988999997-----------------------28-
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCCEEEEECCCCCCCC--CCCCCCHHHHHHHHHHHCCCHH
Q ss_conf 6111102444457876620134588-756529999999985985997199977212--4589998999997754402005
Q 006553 328 ASKVLASCSYEKDTQWGREMGLVYG-YAVEDVVTGLTIQCRGWKSMHYNPERPAFL--GLAPVTLDNSLVQIKRWSEGLF 404 (641)
Q Consensus 328 ~a~~v~~c~Ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~a~~--g~aP~~l~~~~~Qr~RWa~G~~ 404 (641)
||+.. ...||+++.+++...| +..|++... ..+ .....+......|+.+|.+...
T Consensus 538 --------------------gfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~-~~~r~h~~~~s~~~~~~~~~~~~~~~~ 595 (625)
T 2z86_A 538 --------------------GFNESISNAVDYDMYLKLSEVG-PFKHINKIC-YNRVLHGENTSIKKLDIQKENHFKVVN 595 (625)
T ss_dssp --------------------CCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEE-EEEECC----CCSSHHHHHHHHHHHHH
T ss_pred --------------------CCCCCCCCHHHHHHHHHHHHHC-CEEEECCCE-EEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf --------------------9997368727999999999749-999828768-999988986521148999999999999
Q ss_pred HHH
Q ss_conf 677
Q 006553 405 QIF 407 (641)
Q Consensus 405 qi~ 407 (641)
+.+
T Consensus 596 ~~l 598 (625)
T 2z86_A 596 ESL 598 (625)
T ss_dssp HHT
T ss_pred HHH
T ss_conf 999
No 7
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=1.00 E-value=1 Score=137.44 Aligned_cols=225 Identities=12% Similarity=0.044 Sum_probs=145.1
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH
Q ss_conf 93289982589999980256569999999999950788688873115864334433457884527987628991688630
Q 006553 93 PGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNE 172 (641)
Q Consensus 93 P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~~~~~~ 172 (641)
|.|+|+|||||++.. ++++++++.+ +++| +..|.|+||+++|++.+..
T Consensus 1 p~vSViIp~yn~~~~---------l~~~l~Sl~~-q~~~----------------------~~eiivvDd~S~d~t~~~~ 48 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDY---------VAKSISSILS-QTFS----------------------DFELFIMDDNSNEETLNVI 48 (255)
T ss_dssp CCEEEEEEESSCTTT---------HHHHHHHHHT-CSCC----------------------CEEEEEEECSCCHHHHHHH
T ss_pred CEEEEEEECCCCHHH---------HHHHHHHHHH-CCCC----------------------CEEEEEEECCCCCHHHHHH
T ss_conf 959999971797789---------9999999985-6278----------------------6499999789971089999
Q ss_pred CC--CCCCEEEEECCCCCCC----CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 58--8994899990579999----99980899999998615678998899956998889668999999986533599629
Q 006553 173 GC--QLPTLVYMAREKRPEC----PHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEI 246 (641)
Q Consensus 173 ~~--~~p~l~Yi~R~~rp~~----~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~~~v 246 (641)
.. ..+++.|+..+.. +. ...++++|+|.+++. ++||||+.+|+|.++ .|+++.+++..+.+. +++
T Consensus 49 ~~~~~~~~i~~i~~~~~-~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~-~~~~l~~~~~~~~~~---~~~ 119 (255)
T 1qg8_A 49 RPFLNDNRVRFYQSDIS-GVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIY-MPDRLLKMVRELDTH---PEK 119 (255)
T ss_dssp GGGGGSTTEEEEECCCC-SHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEE-CTTHHHHHHHHHHHC---TTC
T ss_pred HHHHHCCCEEEEECCCC-CCCCCCCCCCHHHHHHHHHHH----CCCCEEEEECCCCCC-CHHHHHHHHHHHHHC---CCC
T ss_conf 99860698899964653-332221466789999999987----588889996898762-827999999999858---990
Q ss_pred EEEECCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 9991674112--37866322220246788898864205980000343448536421764665321100001223103689
Q 006553 247 AFVQHPQCFD--IISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDE 324 (641)
Q Consensus 247 a~VQ~pq~f~--n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (641)
++|.+..... +.+... ......... ...........|+++++||+++..
T Consensus 120 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~rr~~~~~----------------------- 170 (255)
T 1qg8_A 120 AVIYSASKTYHLNENRDI-VKETVRPAA-----QVTWNAPCAIDHCSVMHRYSVLEK----------------------- 170 (255)
T ss_dssp CEEEEEEEEEEEC---CE-EEEEEECCC-----SCBSCCTTTSCGGGEEEETHHHHH-----------------------
T ss_pred EEEEECEEEEEECCCCCC-HHHCCCCHH-----HHHHHHCCCCCCCEEEEEHHHHHH-----------------------
T ss_conf 599843289985788765-122058647-----788751587765327788999975-----------------------
Q ss_pred HH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHH--HHHHHHCC
Q ss_conf 99-9611110244445787662013458875652999999998598599719997721245899989999--97754402
Q 006553 325 LE-KASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSL--VQIKRWSE 401 (641)
Q Consensus 325 ig-~~a~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~~l~~~~--~Qr~RWa~ 401 (641)
+| +.. ..|... ......||.+..+++...| +..|++.. ...+...+.+..... .|+.+|.+
T Consensus 171 ~g~~f~-----------~~~~~~---~~~~~~eD~~~~~r~~~~g-~~~~~~~~-~~~~r~~~~s~s~~~~~~~~~~~~~ 234 (255)
T 1qg8_A 171 VKEKFG-----------SYWDES---PAFYRIGDARFFWRVNHFY-PFYPLDEE-LDLNYITDQSIHFQLFELEKNEFVR 234 (255)
T ss_dssp HHHHHS-----------SSSCCC---GGGSTTHHHHHHHHHTTTC-CBEEEEEE-EEEEEEC--------------CTGG
T ss_pred HCCCCC-----------CCCCCC---CCCCHHHHHHHHHHHHHHC-CEEEECCC-EEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 331022-----------223578---5412477999999999759-88980685-8999976986416578998999998
Q ss_pred CH
Q ss_conf 00
Q 006553 402 GL 403 (641)
Q Consensus 402 G~ 403 (641)
..
T Consensus 235 ~~ 236 (255)
T 1qg8_A 235 NL 236 (255)
T ss_dssp GS
T ss_pred HC
T ss_conf 46
No 8
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=1.00 E-value=1 Score=136.01 Aligned_cols=192 Identities=13% Similarity=0.045 Sum_probs=126.4
Q ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH
Q ss_conf 99328998258999998025656999999999995078868887311586433443345788452798762899168863
Q 006553 92 LPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN 171 (641)
Q Consensus 92 ~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~~~~~ 171 (641)
.|.|+|+|||||++.. ++++|+++++ ++++. .+|.|+||++.|++.+.
T Consensus 1 Mp~vSVIIp~yN~~~~---------L~~~L~Sll~-Qt~~~----------------------~EIIVVDDgStD~t~~i 48 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEY---------ITGCLESIKQ-QRTQD----------------------FNLIIVNDGSTDQSKKL 48 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEEECCCCHHH---------HHHHHHHHHH-CCCCC----------------------EEEEEEECCCCCCHHHH
T ss_conf 9669999976787899---------9999999982-77898----------------------69999978998757999
Q ss_pred HC---CC-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 05---88-994899990579999999808999999986156789988999569988896689999999865335996299
Q 006553 172 EG---CQ-LPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 172 ~~---~~-~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
.. .+ -+++.++..++ +.|+++|.|.|++. ++||+|+.+|+|.++ .|++|.+++..+.++ ++.
T Consensus 49 l~~~~~~~~~~i~~i~~~~-----n~G~~~arN~gi~~----A~gdyI~flD~Dd~~-~p~~l~~l~~~l~~~----d~v 114 (729)
T 3l7i_A 49 MDEAIKDYDKNIRFIDLDE-----NSGHAHARNIALEE----VETPYFMFLDADDEL-ASYAITFYLEKFNNT----DGL 114 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHCCCCEEEEECCC-----CCCHHHHHHHHHHH----CCCCEEEEECCCCCC-CHHHHHHHHHHHCCC----CEE
T ss_conf 9999974799889998888-----77879999999986----669989998898777-846999999982379----989
Q ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--CEECCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 9916741123786632222024678889886420598--00003434485364217646653211000012231036899
Q 006553 248 FVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDA--AMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDEL 325 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~i 325 (641)
.... ..+. ..... +.......... ..+...... ....+.++++||+++.. +
T Consensus 115 ~~~~-~~~~-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rr~~l~~-----------------------~ 167 (729)
T 3l7i_A 115 IAPI-HSFT-TQRPQ-FVDLDRVRVEY-FNAKENINSFLRKQSACNIIFRTAIVRA-----------------------H 167 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEE-EEEE-CCCCC-CCCCCCEEEEE-ECCHHHHHHHHHCCCHHHEEEEHHHHHH-----------------------C
T ss_conf 9866-8862-47874-02356503465-2431448887532563124663999997-----------------------3
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCCEEEEECC
Q ss_conf 996111102444457876620134588-756529999999985985997199
Q 006553 326 EKASKVLASCSYEKDTQWGREMGLVYG-YAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 326 g~~a~~v~~c~Ye~~t~wG~~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
| .||+.+ ...||.+..+++..+|++..|+++
T Consensus 168 g--------------------l~fde~~~~~ED~d~~~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 168 H--------------------IRFNENLNTYVDWSFVLEYMKYVNKFVRIFN 199 (729)
T ss_dssp ----------------------------------------------------
T ss_pred C--------------------CCCCCCCCCCCCHHHHHHHHHHCCCEEEECC
T ss_conf 9--------------------9869987800479999999985697899659
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=1.00 E-value=1 Score=134.75 Aligned_cols=191 Identities=13% Similarity=0.077 Sum_probs=129.0
Q ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
Q ss_conf 99932899825899999802565699999999999507886888731158643344334578845279876289916886
Q 006553 91 KLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD 170 (641)
Q Consensus 91 ~~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~~~~ 170 (641)
..|.|+|+|||||++.. ++++++++.+ +++| +.+|.|+||++.|++.+
T Consensus 3 ~~p~vsViIp~yn~~~~---------l~~~l~Sl~~-q~~~----------------------~~eiIvvDd~S~d~t~~ 50 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKY---------LDQCVQALLA-QTLS----------------------DIEIILIDDESPDNCPK 50 (240)
T ss_dssp CCCSEEEEEEESSCTTT---------HHHHHHHHHT-CSSS----------------------SEEEEEEECCCSSSHHH
T ss_pred CCCCEEEEEECCCCHHH---------HHHHHHHHHH-CCCC----------------------CEEEEEEECCCCCCHHH
T ss_conf 99848999966897789---------9999999995-7689----------------------86999998999867899
Q ss_pred H---HCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 3---0588994899990579999999808999999986156789988999569988896689999999865335996299
Q 006553 171 N---EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIA 247 (641)
Q Consensus 171 ~---~~~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~~~va 247 (641)
. ...+.|++.+++.+ +.++++|.|.+++. ++||||+.+|+|.++ +|++|.+++..+.++ +.++.
T Consensus 51 ~~~~~~~~~~~i~~i~~~------n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~-~~~~l~~l~~~~~~~--~~~~v 117 (240)
T 3bcv_A 51 ICDDYAAQYPNIKVIHKK------NAGLGMACNSGLDV----ATGEYVAFCDSDDYV-DSDMYMTMYNVAQKY--TCDAV 117 (240)
T ss_dssp HHHHHHHHCSSEEEEECC------CCCHHHHHHHHHHH----CCSSEEEECCTTCCC-CTTHHHHHHHHHHHH--TCSEE
T ss_pred HHHHHHHHCCCEEEEECC------CCCHHHHHHHHHHH----CCCCEEEEECCCCCC-CHHHHHHHHHHHHHC--CCCEE
T ss_conf 999999658978999889------99949999999997----689999998798758-889999999999846--99989
Q ss_pred EEECCCCCCCCCCC------------CCCCCCHHHHHHHHHHHHHHCCC---------CEECCCCEEEEHHHHCCCCCCC
Q ss_conf 99167411237866------------32222024678889886420598---------0000343448536421764665
Q 006553 248 FVQHPQCFDIISEN------------DLYGHYNLVENQVELAGLGGYDA---------AMYCGTACFHRRDSLSGAKYSY 306 (641)
Q Consensus 248 ~VQ~pq~f~n~~~~------------d~~~~~~~~~~~~~~~g~d~~~~---------~~~~Gtg~~~RR~aL~~~~~~~ 306 (641)
.+.....+.+.. ..+.. .. .... . .+..+. ...+|.++++||+++.+
T Consensus 118 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~----- 185 (240)
T 3bcv_A 118 --FTGLKRITMAGIPTGTVTHQKEFKLYKNK-NE-IHTL-L--KDLIASDPYAREERAIQVSAKVVLYRRNLIEK----- 185 (240)
T ss_dssp --EC--------------------CEEECSH-HH-HHHH-H--GGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHH-----
T ss_pred --EEEEEEECCCCCCCCCCCCCCCCCCCCCH-HH-HHHH-H--HHHHHCCHHHCCCCCCCCCHHHEEEEHHHHHH-----
T ss_conf --97668873688644332234442002477-78-8889-9--99850333330255302334212555999997-----
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHCCCEEEEECC
Q ss_conf 3211000012231036899996111102444457876620134588--756529999999985985997199
Q 006553 307 DCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYG--YAVEDVVTGLTIQCRGWKSMHYNP 376 (641)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~~~--svtED~~t~~~l~~~Gwrs~y~~~ 376 (641)
+| .||+.+ ...||++..+++..+|++..|++.
T Consensus 186 ------------------~g--------------------~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~ 219 (240)
T 3bcv_A 186 ------------------KH--------------------LRFVSERILPSEDLIFNVDVLANSNIVCVLPQ 219 (240)
T ss_dssp ------------------TT--------------------CCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-
T ss_pred ------------------CC--------------------CCCCCCCCCCCCCHHHHHHHHHHCCEEEEECC
T ss_conf ------------------39--------------------82578887617778999999985998999878
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=1.00 E-value=1 Score=129.71 Aligned_cols=226 Identities=11% Similarity=-0.003 Sum_probs=136.5
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHH--
Q ss_conf 999932899825899999802565699999999999507886888731158643344334578845279876289916--
Q 006553 90 EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTN-- 167 (641)
Q Consensus 90 ~~~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~-- 167 (641)
..-|.|+|.|||||++.. +.+.|+++.+ ++++. +....|.|+||+++|.
T Consensus 177 ~~~pkVSVVIptYN~~~~---------L~~~L~SL~~-qt~~~-------------------~~~~EIIVVDNgStD~s~ 227 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPAD---------CVNALRELTA-DPLVD-------------------QVIGAVIVPDQGERKVRD 227 (657)
T ss_dssp CSCCCEEEECCBSSCHHH---------HHHHHHHHTT-SHHHH-------------------TTEEEEEEEECSSSCGGG
T ss_pred CCCCEEEEEEEECCCHHH---------HHHHHHHHHC-CCCCC-------------------CCCCEEEEEECCCCCCCC
T ss_conf 899869999985599999---------9999999971-74446-------------------887789999895998635
Q ss_pred ---HHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf ---88630588994899990579999999808999999986156789988999569988896689999999865335996
Q 006553 168 ---AVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGH 244 (641)
Q Consensus 168 ---~~~~~~~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~~~ 244 (641)
..+......+++.++..+ + .|.|++.|.+++.....+++|||+.+|+|.++ +|++|.+++..+.+. +
T Consensus 228 ~~~~~e~~~~~~~~I~vI~~~-N-----~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~-~pd~L~~ll~~l~~~---~ 297 (657)
T 4fix_A 228 HPDFPAAAARLGSRLSIHDQP-N-----LGGSGGYSRVMYEALKNTDCQQILFMDDDIRL-EPDSILRVLAMHRFA---K 297 (657)
T ss_dssp STTHHHHHHHHGGGEEEEECC-C-----CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEE-CTHHHHHHHHHHHHB---S
T ss_pred HHHHHHHHHHCCCCEEEEECC-C-----CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC-CHHHHHHHHHHHHHC---C
T ss_conf 579999998519978999889-8-----87799999999998736899889998998851-860999999999858---9
Q ss_pred EEEEEECCCCCCCCC-C-----------CCCCCCCHHH-----H----HH---HHHHHHHH-CCCCEECCCCEEEEHHHH
Q ss_conf 299991674112378-6-----------6322220246-----7----88---89886420-598000034344853642
Q 006553 245 EIAFVQHPQCFDIIS-E-----------NDLYGHYNLV-----E----NQ---VELAGLGG-YDAAMYCGTACFHRRDSL 299 (641)
Q Consensus 245 ~va~VQ~pq~f~n~~-~-----------~d~~~~~~~~-----~----~~---~~~~g~d~-~~~~~~~Gtg~~~RR~aL 299 (641)
+++.|+......+.. . ...+...... + .. ......+. .......|.++++||+++
T Consensus 298 ~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~ 377 (657)
T 4fix_A 298 APMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVA 377 (657)
T ss_dssp SCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHH
T ss_pred CCEEEEEEEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHH
T ss_conf 92899867944789851453251761454411245542122211224543200133212453103424402767039999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 176466532110000122310368999961111024444578766201345-8875652999999998598599719997
Q 006553 300 SGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLV-YGYAVEDVVTGLTIQCRGWKSMHYNPER 378 (641)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~-~~svtED~~t~~~l~~~Gwrs~y~~~~~ 378 (641)
.. +| |++ +..-.||++.++|+..+||+++|++.
T Consensus 378 ~~-----------------------vG---------------------gfd~~F~~~ED~Dl~lR~~~~G~ki~~~p~-- 411 (657)
T 4fix_A 378 EE-----------------------LG---------------------QPLPLFIKWDDADYGLRAAEHGYPTVTLPG-- 411 (657)
T ss_dssp HH-----------------------HC---------------------SCCSCSSSSHHHHHHHHHHHTTCCEEEEEE--
T ss_pred HH-----------------------HC---------------------CCHHHHCCCCHHHHHHHHHHCCCEEEEECC--
T ss_conf 98-----------------------49---------------------983672657689999999984992999898--
Q ss_pred CCCCC----CCC--CCHHHHHHHHHHHC
Q ss_conf 72124----589--99899999775440
Q 006553 379 PAFLG----LAP--VTLDNSLVQIKRWS 400 (641)
Q Consensus 379 ~a~~g----~aP--~~l~~~~~Qr~RWa 400 (641)
+.++- ..+ .....++..|.|+.
T Consensus 412 a~V~H~~~~~~~~~s~~r~Yy~~RN~l~ 439 (657)
T 4fix_A 412 AAIWHMAWSDKDDAIDWQAYFHLRNRLV 439 (657)
T ss_dssp EEEEECCSSSSCCTTSTHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8999757676666557999999999999
Done!