Your job contains 1 sequence.
>006555
MFHSWVRAVLARKSSLGFGLFGRSISSSTNPVNLCKPFNFTLNNYSHIRASAAGAFFFSR
FLGSPFYDFMCFLLLFVNVSIMYWFSGSLYQVGSSLKCNLLPEVPRGFCGVVQNEALEDT
HVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREAL
VYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFA
IFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFG
DPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQL
AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK
EKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNSALYK
RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL
RKVMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG
GIPIRITQRSVPRKCGSSSSRQNTGQKVGRTFSDKRTVPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006555
(640 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5LR04 - symbol:der "GTPase Der" species:246200... 753 1.2e-74 1
TIGR_CMR|SPO_2328 - symbol:SPO_2328 "GTP-binding protein ... 753 1.2e-74 1
UNIPROTKB|Q2GGW4 - symbol:engA "GTPase Der" species:20592... 365 4.5e-57 2
TIGR_CMR|ECH_0504 - symbol:ECH_0504 "GTP-binding protein ... 365 4.5e-57 2
UNIPROTKB|Q2GKV6 - symbol:der "GTPase Der" species:212042... 348 1.5e-55 2
TIGR_CMR|APH_0390 - symbol:APH_0390 "putative GTP-binding... 348 1.5e-55 2
UNIPROTKB|Q3Z6P5 - symbol:der "GTPase Der" species:243164... 386 5.7e-53 2
TIGR_CMR|DET_1395 - symbol:DET_1395 "GTP-binding protein"... 386 5.7e-53 2
UNIPROTKB|Q74AX4 - symbol:der "GTPase Der" species:243231... 337 4.6e-51 2
TIGR_CMR|GSU_2225 - symbol:GSU_2225 "GTP-binding protein ... 337 4.6e-51 2
UNIPROTKB|P0A6P5 - symbol:der "50S ribosomal subunit stab... 509 8.5e-49 1
TIGR_CMR|CHY_1919 - symbol:CHY_1919 "GTP-binding protein"... 344 2.8e-48 2
UNIPROTKB|Q8EC36 - symbol:der "GTPase Der" species:211586... 492 5.4e-47 1
TIGR_CMR|SO_3308 - symbol:SO_3308 "GTP-binding protein En... 492 5.4e-47 1
UNIPROTKB|Q9KTW7 - symbol:der "GTPase Der" species:243277... 478 1.6e-45 1
TIGR_CMR|VC_0763 - symbol:VC_0763 "GTP-binding protein" s... 478 1.6e-45 1
UNIPROTKB|Q81SW9 - symbol:der "GTPase Der" species:1392 "... 316 1.6e-42 2
TIGR_CMR|BA_1525 - symbol:BA_1525 "GTPase family protein"... 316 1.6e-42 2
UNIPROTKB|Q47WC5 - symbol:der "GTPase Der" species:167879... 440 1.7e-41 1
TIGR_CMR|CPS_4247 - symbol:CPS_4247 "GTP-binding protein ... 440 1.7e-41 1
TAIR|locus:2099277 - symbol:emb2738 "embryo defective 273... 352 1.4e-40 2
UNIPROTKB|Q83C83 - symbol:der "GTPase Der" species:227377... 273 1.8e-39 2
TIGR_CMR|CBU_1245 - symbol:CBU_1245 "GTP-binding protein"... 273 1.8e-39 2
UNIPROTKB|P64057 - symbol:der "GTPase Der" species:1773 "... 288 2.0e-37 2
DICTYBASE|DDB_G0279259 - symbol:DDB_G0279259 "putative GT... 346 7.4e-34 2
TIGR_CMR|CJE_0435 - symbol:CJE_0435 "GTPase family protei... 365 6.1e-33 1
GENEDB_PFALCIPARUM|PFL0835w - symbol:PFL0835w "GTP-bindin... 246 9.5e-30 2
UNIPROTKB|Q8I5N5 - symbol:PFL0835w "GTP binding protein, ... 246 9.5e-30 2
UNIPROTKB|Q2GDM7 - symbol:NSE_0536 "GTPase Der" species:2... 251 8.6e-27 2
TIGR_CMR|NSE_0536 - symbol:NSE_0536 "putative GTP-binding... 251 8.6e-27 2
TIGR_CMR|BA_5734 - symbol:BA_5734 "tRNA modification GTPa... 190 1.2e-11 1
TAIR|locus:2029406 - symbol:AT1G78010 species:3702 "Arabi... 189 2.3e-11 1
TIGR_CMR|CJE_1036 - symbol:CJE_1036 "tRNA modification GT... 187 2.4e-11 1
TIGR_CMR|CHY_0006 - symbol:CHY_0006 "tRNA modification GT... 178 2.6e-10 1
UNIPROTKB|P75104 - symbol:mnmE "tRNA modification GTPase ... 161 1.7e-08 1
CGD|CAL0004408 - symbol:orf19.2042 species:5476 "Candida ... 161 2.4e-08 1
UNIPROTKB|Q8EH80 - symbol:era "GTPase Era" species:211586... 146 4.5e-07 1
TIGR_CMR|SO_1349 - symbol:SO_1349 "GTP-binding protein Er... 146 4.5e-07 1
ZFIN|ZDB-GENE-050522-335 - symbol:gtpbp3 "GTP binding pro... 149 4.6e-07 1
TIGR_CMR|GSU_3465 - symbol:GSU_3465 "tRNA modification GT... 148 5.0e-07 1
UNIPROTKB|P25522 - symbol:mnmE "GTP-binding protein with ... 145 1.1e-06 1
UNIPROTKB|Q9KVY5 - symbol:mnmE "tRNA modification GTPase ... 144 1.3e-06 1
TIGR_CMR|VC_0003 - symbol:VC_0003 "thiophene and furan ox... 144 1.3e-06 1
TIGR_CMR|SO_0003 - symbol:SO_0003 "tRNA modification GTPa... 141 2.9e-06 1
ASPGD|ASPL0000007078 - symbol:AN6522 species:162425 "Emer... 125 3.8e-06 2
SGD|S000004625 - symbol:MSS1 "Mitochondrial protein" spec... 140 4.7e-06 1
TIGR_CMR|CPS_5049 - symbol:CPS_5049 "tRNA modification GT... 139 5.1e-06 1
UNIPROTKB|E2RE04 - symbol:GTPBP3 "Uncharacterized protein... 137 6.3e-06 1
WB|WBGene00009557 - symbol:F39B2.7 species:6239 "Caenorha... 137 7.5e-06 1
MGI|MGI:1917609 - symbol:Gtpbp3 "GTP binding protein 3" s... 136 1.2e-05 1
TIGR_CMR|CBU_1922 - symbol:CBU_1922 "tRNA modification GT... 142 1.3e-05 2
UNIPROTKB|Q969Y2 - symbol:GTPBP3 "tRNA modification GTPas... 135 1.5e-05 1
TIGR_CMR|NSE_0717 - symbol:NSE_0717 "tRNA modification GT... 133 2.9e-05 1
TIGR_CMR|SPO_3895 - symbol:SPO_3895 "tRNA modification GT... 130 4.2e-05 1
TIGR_CMR|GSU_3268 - symbol:GSU_3268 "ferrous iron transpo... 133 4.5e-05 1
TIGR_CMR|ECH_0060 - symbol:ECH_0060 "tRNA modification GT... 127 9.3e-05 1
UNIPROTKB|P06616 - symbol:era "GTP-binding protein" speci... 124 9.7e-05 1
RGD|1305367 - symbol:Gtpbp3 "GTP binding protein 3" speci... 133 9.9e-05 2
TIGR_CMR|BA_4524 - symbol:BA_4524 "GTP-binding protein Er... 123 0.00013 1
UNIPROTKB|B5X2B8 - symbol:eral1 "GTPase Era, mitochondria... 126 0.00013 1
UNIPROTKB|Q484S4 - symbol:CPS_1703 "Ribosome biogenesis G... 123 0.00013 1
TIGR_CMR|CPS_1703 - symbol:CPS_1703 "GTP-binding protein"... 123 0.00013 1
ZFIN|ZDB-GENE-030131-5982 - symbol:gtpbp4 "GTP binding pr... 127 0.00016 1
FB|FBgn0039189 - symbol:CG18528 species:7227 "Drosophila ... 130 0.00021 2
TIGR_CMR|CPS_4121 - symbol:CPS_4121 "GTP-binding protein ... 121 0.00022 1
TIGR_CMR|CJE_0763 - symbol:CJE_0763 "GTP-binding protein ... 120 0.00025 1
UNIPROTKB|Q74AX3 - symbol:era "GTPase Era" species:243231... 120 0.00027 1
TIGR_CMR|GSU_2226 - symbol:GSU_2226 "GTP-binding protein ... 120 0.00027 1
UNIPROTKB|E1BH64 - symbol:E1BH64 "Uncharacterized protein... 129 0.00034 2
DICTYBASE|DDB_G0288609 - symbol:eral1 "GTP-binding protei... 121 0.00036 1
UNIPROTKB|Q8EAH6 - symbol:hydF "Fe hydrogenase maturation... 120 0.00046 1
TIGR_CMR|SO_3926 - symbol:SO_3926 "GTP-binding protein" s... 120 0.00046 1
DICTYBASE|DDB_G0268824 - symbol:DDB_G0268824 species:4468... 120 0.00053 1
TIGR_CMR|APH_1288 - symbol:APH_1288 "tRNA modification GT... 120 0.00056 1
TIGR_CMR|CBU_1502 - symbol:CBU_1502 "GTP-binding protein ... 117 0.00056 1
TIGR_CMR|CHY_0430 - symbol:CHY_0430 "GTP-binding protein ... 117 0.00058 1
>UNIPROTKB|Q5LR04 [details] [associations]
symbol:der "GTPase Der" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 183/474 (38%), Positives = 273/474 (57%)
Query: 155 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 214
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGQARLGDLRFTVIDTAGLE 61
Query: 215 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
T AT S+ R +T + +FMID R+G+ P D LR+ + + I+A
Sbjct: 62 T-ATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHV--ILAA 118
Query: 275 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 334
NK E G + AG E+ LG G+PI +SAE G G+ ELY L P + D M + +
Sbjct: 119 NKAE----GAAADAGVI-EAYGLGLGEPIRLSAEHGEGLNELYAVLMP-LADEMEQQAEE 172
Query: 335 SCTQNN-------SSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 387
+ + ++V +P + PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 173 QAPETDVDLDPEDEDGEEVAAPHAITREKPLQVAVVGRPNAGKSTLINRILGEDRLLTGP 232
Query: 388 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 446
EAG+TRD++ + ++ + + DTAG ++ K ++ LSV + + A VV ++L
Sbjct: 233 EAGITRDAISLQIDWNDTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLL 292
Query: 447 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 496
DA +++R A EGR +V+ VNK D+ +Q+ + +KE+ + ++PQ
Sbjct: 293 DAAIPFEQQDLRIADLAEREGRAVVIAVNKWDVEENKQDKL--RELKES----FERLLPQ 346
Query: 497 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQ 555
+ G P+V SA GRG + ++ ++ W R+PT+ LNRWL ++ +H Q +
Sbjct: 347 LRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIPTAALNRWLIGMLEQHPPPAPQGKR 406
Query: 556 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 609
K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+T R
Sbjct: 407 IKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYLVNGLRADFDMPGTPIRLTLR 460
>TIGR_CMR|SPO_2328 [details] [associations]
symbol:SPO_2328 "GTP-binding protein EngA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 183/474 (38%), Positives = 273/474 (57%)
Query: 155 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 214
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGQARLGDLRFTVIDTAGLE 61
Query: 215 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
T AT S+ R +T + +FMID R+G+ P D LR+ + + I+A
Sbjct: 62 T-ATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHV--ILAA 118
Query: 275 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 334
NK E G + AG E+ LG G+PI +SAE G G+ ELY L P + D M + +
Sbjct: 119 NKAE----GAAADAGVI-EAYGLGLGEPIRLSAEHGEGLNELYAVLMP-LADEMEQQAEE 172
Query: 335 SCTQNN-------SSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 387
+ + ++V +P + PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 173 QAPETDVDLDPEDEDGEEVAAPHAITREKPLQVAVVGRPNAGKSTLINRILGEDRLLTGP 232
Query: 388 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 446
EAG+TRD++ + ++ + + DTAG ++ K ++ LSV + + A VV ++L
Sbjct: 233 EAGITRDAISLQIDWNDTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLL 292
Query: 447 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 496
DA +++R A EGR +V+ VNK D+ +Q+ + +KE+ + ++PQ
Sbjct: 293 DAAIPFEQQDLRIADLAEREGRAVVIAVNKWDVEENKQDKL--RELKES----FERLLPQ 346
Query: 497 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQ 555
+ G P+V SA GRG + ++ ++ W R+PT+ LNRWL ++ +H Q +
Sbjct: 347 LRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIPTAALNRWLIGMLEQHPPPAPQGKR 406
Query: 556 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 609
K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+T R
Sbjct: 407 IKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYLVNGLRADFDMPGTPIRLTLR 460
>UNIPROTKB|Q2GGW4 [details] [associations]
symbol:engA "GTPase Der" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 365 (133.5 bits), Expect = 4.5e-57, Sum P(2) = 4.5e-57
Identities = 88/263 (33%), Positives = 151/263 (57%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
++L+IVGRPN GKST +N LL E+R++V PE G TRDS+ V + Y+G+ L+DTAG
Sbjct: 174 IKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAG--M 231
Query: 418 REKEKGPASLSVMQSRK---NLMRAHVVALVLDA------EEVR----AVEEGRGLVVIV 464
R+K K S+ V K ++ R+ +V L++D+ +++ A+++G+ +++ +
Sbjct: 232 RKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIAL 291
Query: 465 NKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 524
NK D+++ + S L K + + +PV+ SAL+ ++ I+ Y
Sbjct: 292 NKWDMIAKKDRSELLKDICNYNKLNFK--------VPVIEVSALKNINCNKIIETSIELY 343
Query: 525 QKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSD 583
+ +R+ TS LN+WL+ + H + + KIKY TQVK PPTF+A ++G ++
Sbjct: 344 KCLTMRISTSVLNKWLKLAVEYHKPPLCNGKVVKIKYITQVKVIPPTFIAVVNGSYSIDL 403
Query: 584 AELRFLTKSLKEDFDLGGIPIRI 606
++L SL++ F + GIPIR+
Sbjct: 404 TYRQYLMSSLRKHFSIDGIPIRL 426
Score = 251 (93.4 bits), Expect = 4.5e-57, Sum P(2) = 4.5e-57
Identities = 69/183 (37%), Positives = 106/183 (57%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE- 214
+ I+G PNVGKS +FNRL ++ A+V N P+ +TRD REG A L L+FK++D+ G++
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPN--LTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 215 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
T S +LD+ ++ + ++ F++D R ++E K+LRK KPI+ +
Sbjct: 62 TIKLSSLVLDQVK-LS---IEESDIIFFVVDARIEHDDKNIEFAKYLRKKVK--KPIILI 115
Query: 275 -NKCESLHNGTGSLAGAAAESLMLGFGD---PIAISAETGLGMTELYEALRPSVEDYMLR 330
NKCES S+ LG+ D P+ ISAE LG+ +LYEAL P +++Y L
Sbjct: 116 ANKCES-QKRCYSID-------YLGYFDFIGPVYISAEHNLGLVDLYEALLPFIKEYDLN 167
Query: 331 VLN 333
L+
Sbjct: 168 TLD 170
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 138 LYEKPVDFTK-IDINLLPT----VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD 192
LYE + F K D+N L + I+GRPN GKS NRL+ +V +P+ TRD
Sbjct: 153 LYEALLPFIKEYDLNTLDLHNIKLSIVGRPNAGKSTFINRLLAENRMIV--SPEPGTTRD 210
Query: 193 IREGLAKLGDLRFKVLDSAGLETEA-TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLH 251
+ +F ++D+AG+ +A + SI + T + ++ I MID G+
Sbjct: 211 SIDVEYTYRGQKFTLIDTAGMRKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIE 270
Query: 252 PLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGS-LAGAAAESLMLGFGDP-IAISAET 309
DL + + + I I+A+NK + + S L L F P I +SA
Sbjct: 271 QQDLSIAELAIQKGKAI--IIALNKWDMIAKKDRSELLKDICNYNKLNFKVPVIEVSALK 328
Query: 310 GLGMTELYEALRPSVEDY 327
+ ++ E S+E Y
Sbjct: 329 NINCNKIIET---SIELY 343
>TIGR_CMR|ECH_0504 [details] [associations]
symbol:ECH_0504 "GTP-binding protein EngA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 365 (133.5 bits), Expect = 4.5e-57, Sum P(2) = 4.5e-57
Identities = 88/263 (33%), Positives = 151/263 (57%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
++L+IVGRPN GKST +N LL E+R++V PE G TRDS+ V + Y+G+ L+DTAG
Sbjct: 174 IKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAG--M 231
Query: 418 REKEKGPASLSVMQSRK---NLMRAHVVALVLDA------EEVR----AVEEGRGLVVIV 464
R+K K S+ V K ++ R+ +V L++D+ +++ A+++G+ +++ +
Sbjct: 232 RKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIAL 291
Query: 465 NKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 524
NK D+++ + S L K + + +PV+ SAL+ ++ I+ Y
Sbjct: 292 NKWDMIAKKDRSELLKDICNYNKLNFK--------VPVIEVSALKNINCNKIIETSIELY 343
Query: 525 QKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSD 583
+ +R+ TS LN+WL+ + H + + KIKY TQVK PPTF+A ++G ++
Sbjct: 344 KCLTMRISTSVLNKWLKLAVEYHKPPLCNGKVVKIKYITQVKVIPPTFIAVVNGSYSIDL 403
Query: 584 AELRFLTKSLKEDFDLGGIPIRI 606
++L SL++ F + GIPIR+
Sbjct: 404 TYRQYLMSSLRKHFSIDGIPIRL 426
Score = 251 (93.4 bits), Expect = 4.5e-57, Sum P(2) = 4.5e-57
Identities = 69/183 (37%), Positives = 106/183 (57%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE- 214
+ I+G PNVGKS +FNRL ++ A+V N P+ +TRD REG A L L+FK++D+ G++
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPN--LTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 215 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
T S +LD+ ++ + ++ F++D R ++E K+LRK KPI+ +
Sbjct: 62 TIKLSSLVLDQVK-LS---IEESDIIFFVVDARIEHDDKNIEFAKYLRKKVK--KPIILI 115
Query: 275 -NKCESLHNGTGSLAGAAAESLMLGFGD---PIAISAETGLGMTELYEALRPSVEDYMLR 330
NKCES S+ LG+ D P+ ISAE LG+ +LYEAL P +++Y L
Sbjct: 116 ANKCES-QKRCYSID-------YLGYFDFIGPVYISAEHNLGLVDLYEALLPFIKEYDLN 167
Query: 331 VLN 333
L+
Sbjct: 168 TLD 170
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 138 LYEKPVDFTK-IDINLLPT----VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD 192
LYE + F K D+N L + I+GRPN GKS NRL+ +V +P+ TRD
Sbjct: 153 LYEALLPFIKEYDLNTLDLHNIKLSIVGRPNAGKSTFINRLLAENRMIV--SPEPGTTRD 210
Query: 193 IREGLAKLGDLRFKVLDSAGLETEA-TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLH 251
+ +F ++D+AG+ +A + SI + T + ++ I MID G+
Sbjct: 211 SIDVEYTYRGQKFTLIDTAGMRKKAKVTESIEVTSVHKTIESINRSDIVILMIDSVYGIE 270
Query: 252 PLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGS-LAGAAAESLMLGFGDP-IAISAET 309
DL + + + I I+A+NK + + S L L F P I +SA
Sbjct: 271 QQDLSIAELAIQKGKAI--IIALNKWDMIAKKDRSELLKDICNYNKLNFKVPVIEVSALK 328
Query: 310 GLGMTELYEALRPSVEDY 327
+ ++ E S+E Y
Sbjct: 329 NINCNKIIET---SIELY 343
>UNIPROTKB|Q2GKV6 [details] [associations]
symbol:der "GTPase Der" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 348 (127.6 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 86/270 (31%), Positives = 148/270 (54%)
Query: 349 PEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVY 408
P+ D+ + P+ ++I+G+PNVGKST +N++L E+RV+ AG TRDS+ + Y+G T+
Sbjct: 167 PKKDQDR-PIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLL 225
Query: 409 LVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE----------VRAVEEG 457
L DTAG +R K + LSV + L ++HVV L++D + A+++G
Sbjct: 226 LTDTAGIRKRTKVTENMEKLSVQSAIHALSKSHVVILIVDFTQGISQQDLSIASTAIKDG 285
Query: 458 RGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVM 517
+G+V+ +NK DL++ K ++A+ I+ +P++ SALE G V+
Sbjct: 286 KGIVLALNKADLVND-------KAAEDAILNAIRQYSRVDFDVPIMKMSALENIGCDKVL 338
Query: 518 HQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLS 576
+ + Y+ + TS+LN+WL + H Q+ + ++KY +QV PPTFV +
Sbjct: 339 SKAVKIYESASTHISTSKLNKWLGTAIDYHPPHLQNKKKVRLKYISQVSTLPPTFVIATN 398
Query: 577 GKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
+ S + +L S + F + G+PIR+
Sbjct: 399 STEVESTYQT-YLKNSFLKHFSMQGVPIRM 427
Score = 255 (94.8 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 68/172 (39%), Positives = 89/172 (51%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
V I+G PNVGKS LFNRL RR+ A+V + HVTRD +E L LRF +D+ G+
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIA--HVTRDRKEALVDFCGLRFIAIDTGGV-- 59
Query: 216 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 274
A G I L +F+ID + +GKWL K KPI+ +
Sbjct: 60 -ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITN--KPIILVA 116
Query: 275 NKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVE 325
NKCES N +++ LGF P+ ISAE LGM +LYEA+ P +E
Sbjct: 117 NKCESNKNNVH------VDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIE 162
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 39/115 (33%), Positives = 55/115 (47%)
Query: 359 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR 418
++AIVG PNVGKSTL N L + +V A +TRD ++ G +DT G
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 419 EKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV---RAVEEGRGLVVIVNKMDLL 470
+ + SL Q + L A VV V+DA+ + G+ L I NK +L
Sbjct: 63 GEIQ---SLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIIL 114
>TIGR_CMR|APH_0390 [details] [associations]
symbol:APH_0390 "putative GTP-binding protein EngA"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 348 (127.6 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 86/270 (31%), Positives = 148/270 (54%)
Query: 349 PEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVY 408
P+ D+ + P+ ++I+G+PNVGKST +N++L E+RV+ AG TRDS+ + Y+G T+
Sbjct: 167 PKKDQDR-PIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLL 225
Query: 409 LVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE----------VRAVEEG 457
L DTAG +R K + LSV + L ++HVV L++D + A+++G
Sbjct: 226 LTDTAGIRKRTKVTENMEKLSVQSAIHALSKSHVVILIVDFTQGISQQDLSIASTAIKDG 285
Query: 458 RGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVM 517
+G+V+ +NK DL++ K ++A+ I+ +P++ SALE G V+
Sbjct: 286 KGIVLALNKADLVND-------KAAEDAILNAIRQYSRVDFDVPIMKMSALENIGCDKVL 338
Query: 518 HQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLS 576
+ + Y+ + TS+LN+WL + H Q+ + ++KY +QV PPTFV +
Sbjct: 339 SKAVKIYESASTHISTSKLNKWLGTAIDYHPPHLQNKKKVRLKYISQVSTLPPTFVIATN 398
Query: 577 GKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
+ S + +L S + F + G+PIR+
Sbjct: 399 STEVESTYQT-YLKNSFLKHFSMQGVPIRM 427
Score = 255 (94.8 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 68/172 (39%), Positives = 89/172 (51%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
V I+G PNVGKS LFNRL RR+ A+V + HVTRD +E L LRF +D+ G+
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIA--HVTRDRKEALVDFCGLRFIAIDTGGV-- 59
Query: 216 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 274
A G I L +F+ID + +GKWL K KPI+ +
Sbjct: 60 -ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITN--KPIILVA 116
Query: 275 NKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVE 325
NKCES N +++ LGF P+ ISAE LGM +LYEA+ P +E
Sbjct: 117 NKCESNKNNVH------VDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIE 162
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 39/115 (33%), Positives = 55/115 (47%)
Query: 359 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR 418
++AIVG PNVGKSTL N L + +V A +TRD ++ G +DT G
Sbjct: 3 KVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADG 62
Query: 419 EKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV---RAVEEGRGLVVIVNKMDLL 470
+ + SL Q + L A VV V+DA+ + G+ L I NK +L
Sbjct: 63 GEIQ---SLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPIIL 114
>UNIPROTKB|Q3Z6P5 [details] [associations]
symbol:der "GTPase Der" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 386 (140.9 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 107/332 (32%), Positives = 167/332 (50%)
Query: 297 LGFGDPIAISAETGLGMTELYEALRPS-VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESK 355
L G A G G + A S + D M RVL + Q + +PE+D S
Sbjct: 127 LKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLEEL------PDQPIATPEEDNS- 179
Query: 356 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 415
++LA+VGR NVGKSTLLN + ++R +V G TRD++ + G V L+DTAG
Sbjct: 180 --VKLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 416 LQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIV 464
+R K E G SV+++ K + RA +V LV+D EE+ ++ +G+++I+
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIIL 297
Query: 465 NKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 524
NK DL G+ K V Q IQ+ + P++F S GRG ++ +
Sbjct: 298 NKWDLGKGQD--------KAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQ 349
Query: 525 QKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSD 583
++ R+PT+++N + + + H+ Q Q KI Y TQ PP+FV F++ K +
Sbjct: 350 EERNKRIPTAKVNSVVTEALSAHTPPHQGKTQLKIYYATQADTNPPSFVFFVNNPKLVHF 409
Query: 584 AELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 615
+ RF+ L+E F G PIR+T ++ KC
Sbjct: 410 SYERFIENRLRESFGFFGTPIRLTFKARGEKC 441
Score = 189 (71.6 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 55/178 (30%), Positives = 90/178 (50%)
Query: 151 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 210
N P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+
Sbjct: 3 NTTPIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPG--TTRDRLFTTVSWLDRRLIMVDT 60
Query: 211 AGLETEATSGSILDRTAGMTANVLAK-TQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 269
GL+ + S I+ + + ++ K + ++DV++GL D E+ +R+ K
Sbjct: 61 GGLDPDLES--IIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTG---K 115
Query: 270 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 326
P++ + NK ++L G AAE LGFG+P ISA G G+++L + + + D
Sbjct: 116 PVILVANKADNLKMGQ-----EAAEFYSLGFGEPSVISAFHGSGISDLMDRVLEELPD 168
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+AIVGR NVGKSTLLN L ++ + G TRD + + R + +VDT G L +
Sbjct: 8 IAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMVDTGG-LDPD 66
Query: 420 KEKGPASLSVMQSRKNLMRAHVVALVLDAE--------EVRAV--EEGRGLVVIVNKMDL 469
E +Q + A +V LV+D + E+ + G+ ++++ NK D
Sbjct: 67 LESIIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKPVILVANKADN 126
Query: 470 LSGRQNSA 477
L Q +A
Sbjct: 127 LKMGQEAA 134
>TIGR_CMR|DET_1395 [details] [associations]
symbol:DET_1395 "GTP-binding protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 386 (140.9 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 107/332 (32%), Positives = 167/332 (50%)
Query: 297 LGFGDPIAISAETGLGMTELYEALRPS-VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESK 355
L G A G G + A S + D M RVL + Q + +PE+D S
Sbjct: 127 LKMGQEAAEFYSLGFGEPSVISAFHGSGISDLMDRVLEEL------PDQPIATPEEDNS- 179
Query: 356 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 415
++LA+VGR NVGKSTLLN + ++R +V G TRD++ + G V L+DTAG
Sbjct: 180 --VKLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Query: 416 LQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIV 464
+R K E G SV+++ K + RA +V LV+D EE+ ++ +G+++I+
Sbjct: 238 RRRGKVESGVEKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIIL 297
Query: 465 NKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 524
NK DL G+ K V Q IQ+ + P++F S GRG ++ +
Sbjct: 298 NKWDLGKGQD--------KAEVTQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQ 349
Query: 525 QKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSD 583
++ R+PT+++N + + + H+ Q Q KI Y TQ PP+FV F++ K +
Sbjct: 350 EERNKRIPTAKVNSVVTEALSAHTPPHQGKTQLKIYYATQADTNPPSFVFFVNNPKLVHF 409
Query: 584 AELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 615
+ RF+ L+E F G PIR+T ++ KC
Sbjct: 410 SYERFIENRLRESFGFFGTPIRLTFKARGEKC 441
Score = 189 (71.6 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 55/178 (30%), Positives = 90/178 (50%)
Query: 151 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 210
N P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+
Sbjct: 3 NTTPIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPG--TTRDRLFTTVSWLDRRLIMVDT 60
Query: 211 AGLETEATSGSILDRTAGMTANVLAK-TQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 269
GL+ + S I+ + + ++ K + ++DV++GL D E+ +R+ K
Sbjct: 61 GGLDPDLES--IIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTG---K 115
Query: 270 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 326
P++ + NK ++L G AAE LGFG+P ISA G G+++L + + + D
Sbjct: 116 PVILVANKADNLKMGQ-----EAAEFYSLGFGEPSVISAFHGSGISDLMDRVLEELPD 168
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+AIVGR NVGKSTLLN L ++ + G TRD + + R + +VDT G L +
Sbjct: 8 IAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMVDTGG-LDPD 66
Query: 420 KEKGPASLSVMQSRKNLMRAHVVALVLDAE--------EVRAV--EEGRGLVVIVNKMDL 469
E +Q + A +V LV+D + E+ + G+ ++++ NK D
Sbjct: 67 LESIIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKPVILVANKADN 126
Query: 470 LSGRQNSA 477
L Q +A
Sbjct: 127 LKMGQEAA 134
>UNIPROTKB|Q74AX4 [details] [associations]
symbol:der "GTPase Der" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 337 (123.7 bits), Expect = 4.6e-51, Sum P(2) = 4.6e-51
Identities = 97/282 (34%), Positives = 145/282 (51%)
Query: 344 QDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQ 403
Q TSPE+ + ++A+VGRPNVGKS+L+N LL +RV+ P G TRDSV F
Sbjct: 166 QRTTSPEERNAT---KIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCN 222
Query: 404 GRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE-VR--------- 452
+ L+DTAG ++ K SV+ S +++ RA VV +VL+AEE V
Sbjct: 223 KKRYLLIDTAGIRRKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGY 282
Query: 453 AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRG 512
A E G+ + +VNK D + + NS++ + V +I+T + +P+VF SA G+
Sbjct: 283 AFEAGKACIFVVNKWDAIE-KDNSSVGRFV-----DKIRTEFKYLAFVPIVFVSAKTGQR 336
Query: 513 RIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTF 571
+M +V ++ R+ TS LNR + V H + K + TQV RPPTF
Sbjct: 337 LNRIMEEVEKVMAQYVKRVTTSELNRIFSAAVESHHHPLVMGRRVKFYFATQVGTRPPTF 396
Query: 572 VAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 613
V F + + + R+L +E FD G P+R+ R R
Sbjct: 397 VIFTNRPDGMHFSYERYLVNKFREAFDFTGTPLRLLFRGRER 438
Score = 224 (83.9 bits), Expect = 4.6e-51, Sum P(2) = 4.6e-51
Identities = 61/168 (36%), Positives = 95/168 (56%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
+LP V I+GRPNVGKS LFNRL+ RR+A+V + P VTRD D+ F ++D+
Sbjct: 2 ILPIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPG--VTRDRNYETVTRFDVPFILIDTG 59
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 271
G E E+ S +L + + + + +F++D R+GL+P D+EV + LR+ KP+
Sbjct: 60 GFEPES-SDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVD---KPV 115
Query: 272 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE 318
+NK + +L AA+E LG + + ISAE G+ +L +
Sbjct: 116 FFVVNKVDG-----ETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMD 158
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 40/181 (22%), Positives = 83/181 (45%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
+ ++GRPNVGKS+L NRL+ E +V N P TRD + R+ ++D+AG+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGY-ERVVAN-PTPGTTRDSVDTWFTCNKKRYLLIDTAGIRR 236
Query: 216 EATSGSILDRTAGMTA-NVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
+ + +++ + + + + + + +++ G+ D + + + I +
Sbjct: 237 KGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGKAC--IFVV 294
Query: 275 NKCESLHNGTGSLAGAA----AESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 330
NK +++ S+ E L F + +SA+TG + + E + + Y+ R
Sbjct: 295 NKWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKVMAQYVKR 354
Query: 331 V 331
V
Sbjct: 355 V 355
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 46/128 (35%), Positives = 64/128 (50%)
Query: 356 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGR---TVYLVDT 412
LP+ +AIVGRPNVGKSTL N L+ + +V G+TRD ++E R L+DT
Sbjct: 3 LPI-VAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDR---NYETVTRFDVPFILIDT 58
Query: 413 AGWLQREKEKGPASLSVM--QSRKNLMRAHVVALVLDAE------EVRAVEEGRGL---- 460
G+ E E L M QSR + A V+ ++D +V VE R +
Sbjct: 59 GGF---EPESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPV 115
Query: 461 VVIVNKMD 468
+VNK+D
Sbjct: 116 FFVVNKVD 123
>TIGR_CMR|GSU_2225 [details] [associations]
symbol:GSU_2225 "GTP-binding protein Era, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 337 (123.7 bits), Expect = 4.6e-51, Sum P(2) = 4.6e-51
Identities = 97/282 (34%), Positives = 145/282 (51%)
Query: 344 QDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQ 403
Q TSPE+ + ++A+VGRPNVGKS+L+N LL +RV+ P G TRDSV F
Sbjct: 166 QRTTSPEERNAT---KIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCN 222
Query: 404 GRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE-VR--------- 452
+ L+DTAG ++ K SV+ S +++ RA VV +VL+AEE V
Sbjct: 223 KKRYLLIDTAGIRRKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGY 282
Query: 453 AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRG 512
A E G+ + +VNK D + + NS++ + V +I+T + +P+VF SA G+
Sbjct: 283 AFEAGKACIFVVNKWDAIE-KDNSSVGRFV-----DKIRTEFKYLAFVPIVFVSAKTGQR 336
Query: 513 RIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTF 571
+M +V ++ R+ TS LNR + V H + K + TQV RPPTF
Sbjct: 337 LNRIMEEVEKVMAQYVKRVTTSELNRIFSAAVESHHHPLVMGRRVKFYFATQVGTRPPTF 396
Query: 572 VAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 613
V F + + + R+L +E FD G P+R+ R R
Sbjct: 397 VIFTNRPDGMHFSYERYLVNKFREAFDFTGTPLRLLFRGRER 438
Score = 224 (83.9 bits), Expect = 4.6e-51, Sum P(2) = 4.6e-51
Identities = 61/168 (36%), Positives = 95/168 (56%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
+LP V I+GRPNVGKS LFNRL+ RR+A+V + P VTRD D+ F ++D+
Sbjct: 2 ILPIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPG--VTRDRNYETVTRFDVPFILIDTG 59
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 271
G E E+ S +L + + + + +F++D R+GL+P D+EV + LR+ KP+
Sbjct: 60 GFEPES-SDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVD---KPV 115
Query: 272 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE 318
+NK + +L AA+E LG + + ISAE G+ +L +
Sbjct: 116 FFVVNKVDG-----ETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMD 158
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 40/181 (22%), Positives = 83/181 (45%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
+ ++GRPNVGKS+L NRL+ E +V N P TRD + R+ ++D+AG+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGY-ERVVAN-PTPGTTRDSVDTWFTCNKKRYLLIDTAGIRR 236
Query: 216 EATSGSILDRTAGMTA-NVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
+ + +++ + + + + + + +++ G+ D + + + I +
Sbjct: 237 KGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGKAC--IFVV 294
Query: 275 NKCESLHNGTGSLAGAA----AESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 330
NK +++ S+ E L F + +SA+TG + + E + + Y+ R
Sbjct: 295 NKWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKVMAQYVKR 354
Query: 331 V 331
V
Sbjct: 355 V 355
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 46/128 (35%), Positives = 64/128 (50%)
Query: 356 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGR---TVYLVDT 412
LP+ +AIVGRPNVGKSTL N L+ + +V G+TRD ++E R L+DT
Sbjct: 3 LPI-VAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDR---NYETVTRFDVPFILIDT 58
Query: 413 AGWLQREKEKGPASLSVM--QSRKNLMRAHVVALVLDAE------EVRAVEEGRGL---- 460
G+ E E L M QSR + A V+ ++D +V VE R +
Sbjct: 59 GGF---EPESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPV 115
Query: 461 VVIVNKMD 468
+VNK+D
Sbjct: 116 FFVVNKVD 123
>UNIPROTKB|P0A6P5 [details] [associations]
symbol:der "50S ribosomal subunit stability factor"
species:83333 "Escherichia coli K-12" [GO:0005829 "cytosol"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0043022 GO:GO:0000027
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 PIR:F65027 RefSeq:NP_417006.2
RefSeq:YP_490739.1 ProteinModelPortal:P0A6P5 SMR:P0A6P5
DIP:DIP-48272N IntAct:P0A6P5 PaxDb:P0A6P5 PRIDE:P0A6P5
EnsemblBacteria:EBESCT00000000698 EnsemblBacteria:EBESCT00000017218
GeneID:12934159 GeneID:946983 KEGG:ecj:Y75_p2464 KEGG:eco:b2511
PATRIC:32120415 EchoBASE:EB3959 EcoGene:EG14207
BioCyc:EcoCyc:G7319-MONOMER BioCyc:ECOL316407:JW5403-MONOMER
BioCyc:MetaCyc:G7319-MONOMER Genevestigator:P0A6P5 Uniprot:P0A6P5
Length = 490
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 161/475 (33%), Positives = 233/475 (49%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 270
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 271 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 329
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 330 R--VLNDS--CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 383
+ V D+ Q + EDD LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 384 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 442
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 443 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 492
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 493 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 551
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 552 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>TIGR_CMR|CHY_1919 [details] [associations]
symbol:CHY_1919 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0017111 eggNOG:COG1160 HOGENOM:HOG000242861
KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR RefSeq:YP_360738.1 ProteinModelPortal:Q3AAU6
STRING:Q3AAU6 GeneID:3728232 KEGG:chy:CHY_1919 PATRIC:21276929
BioCyc:CHYD246194:GJCN-1918-MONOMER Uniprot:Q3AAU6
Length = 440
Score = 344 (126.2 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 95/275 (34%), Positives = 154/275 (56%)
Query: 349 PEDDESKLPL-QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTV 407
PED E + P+ ++A+VGRPNVGKS+L+NALL E+RV+V G TRD++ YQG+
Sbjct: 167 PEDYEDENPVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPY 226
Query: 408 YLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE--------VRAV--EE 456
L+DTAG ++ + E+ SV +S K + RA V LV+ AEE + + E
Sbjct: 227 LLIDTAGMRRKSRIEEDLERYSVNRSIKAIRRADVALLVISAEEGVTEQDKKIAGLIHEY 286
Query: 457 GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAV 516
GRG++++VNK DL+ +A R KE + E+ + PV+F SA G+ R+
Sbjct: 287 GRGVIIVVNKWDLIEKDAKTA--DRYKEHIYFELGFL----KYAPVIFVSAKTGQ-RLNK 339
Query: 517 MHQVIDTYQ-KWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAF 574
+ +++D + R+ TS LN+ LR+ + + +P KI Y TQ++ +PPTF F
Sbjct: 340 LMELVDRVSFEHQKRVATSILNQVLREAVVLNPPPADRGRPLKIYYATQIETKPPTFALF 399
Query: 575 LSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 609
++ + + + LR+L +++F G ++ R
Sbjct: 400 VNDAELMHFSYLRYLENVFRQNFGFEGTTLKFVLR 434
Score = 190 (71.9 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 58/178 (32%), Positives = 86/178 (48%)
Query: 154 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 213
P V I+GRPNVGKS LFNR+I R A+V +TP VTRD A+ F ++D+ GL
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIIGERIAIVEDTPG--VTRDRLYSEAEWQGKVFDLIDTGGL 61
Query: 214 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 273
E + I + + + +F+ D R G+ D V K LRK KP++
Sbjct: 62 EF--SEDLITTKVREQIEKAINEADLILFVCDSREGITSTDEAVAKNLRKSD---KPVIL 116
Query: 274 M-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV---EDY 327
+ NK + N + + LG G+P +SA G + +L + + + EDY
Sbjct: 117 VANKVDDYLNPPANFY----DLYRLGLGEPFPVSAANGTNVGDLLDLVISKLNFPEDY 170
Score = 140 (54.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 355 KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 414
K P+ +AIVGRPNVGKSTL N ++ E +V G+TRD + E+QG+ L+DT G
Sbjct: 2 KKPV-VAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGG 60
Query: 415 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE-VRAVEEG---------RGLVVIV 464
L+ ++ + Q K + A ++ V D+ E + + +E + ++++
Sbjct: 61 -LEFSEDLITTKVRE-QIEKAINEADLILFVCDSREGITSTDEAVAKNLRKSDKPVILVA 118
Query: 465 NKMD 468
NK+D
Sbjct: 119 NKVD 122
Score = 139 (54.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 65/277 (23%), Positives = 120/277 (43%)
Query: 142 PVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLG 201
P D+ D N + + ++GRPNVGKS+L N L+ +V + P TRD +
Sbjct: 167 PEDYE--DENPVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPG--TTRDAIDTPMWYQ 222
Query: 202 DLRFKVLDSAGLETEATSGSILDR-TAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKW 260
+ ++D+AG+ ++ L+R + + + + A+ +I G+ D ++
Sbjct: 223 GKPYLLIDTAGMRRKSRIEEDLERYSVNRSIKAIRRADVALLVISAEEGVTEQDKKIAGL 282
Query: 261 LRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLM--LGF---GDPIAISAETGLGMTE 315
+ ++ + I+ +NK + + + A E + LGF I +SA+TG + +
Sbjct: 283 IHEYGRGV--IIVVNKWDLIEKDAKT-ADRYKEHIYFELGFLKYAPVIFVSAKTGQRLNK 339
Query: 316 LYEAL-RPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLL 374
L E + R S E + RV Q + P D + PL++ + T
Sbjct: 340 LMELVDRVSFE-HQKRVATSILNQVLREAVVLNPPPADRGR-PLKIYYATQIETKPPTF- 396
Query: 375 NALLQEDRVLVGPEAGLTRDSV-RVHFEYQGRTVYLV 410
AL D L+ ++V R +F ++G T+ V
Sbjct: 397 -ALFVNDAELMHFSYLRYLENVFRQNFGFEGTTLKFV 432
>UNIPROTKB|Q8EC36 [details] [associations]
symbol:der "GTPase Der" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_718862.1 ProteinModelPortal:Q8EC36
GeneID:1170993 KEGG:son:SO_3308 PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 148/470 (31%), Positives = 228/470 (48%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A L F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAFLSGYEFIVVDTG 58
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 271
G++ T I + A + + + +FM D R+GL DL + + LR Q
Sbjct: 59 GID--GTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR--QKTTF 114
Query: 272 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML- 329
V NK + + + A AE LG G+ ++A G G+T + E AL P E +
Sbjct: 115 VVANKIDGIDADS-----ACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIE 169
Query: 330 RVLNDSCTQNNSSTQDVTSPEDDESK-LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 388
R + T++ E + LP++LAI+G+PNVGKSTL N +L E+RV+V E
Sbjct: 170 RQGEEEEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDE 229
Query: 389 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 447
G TRDS+ + E GR ++DTAG +R K + SV+++ K + A+VV L++D
Sbjct: 230 PGTTRDSIYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIID 289
Query: 448 AEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 497
A E A ++ GR LV+ VNK D + + +K+ V E+ + +
Sbjct: 290 AREGVAEQDLGLLGFALNAGRALVIAVNKWD--------GIDQGIKDRVKSELDRRLGFI 341
Query: 498 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQP 556
+ F SAL G G + + + Y R+ TS L R ++ H +
Sbjct: 342 DFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRV 401
Query: 557 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
K+KY PP V + L D+ R++ + + G PI++
Sbjct: 402 KLKYAHAGGYNPPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQL 451
>TIGR_CMR|SO_3308 [details] [associations]
symbol:SO_3308 "GTP-binding protein EngA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 RefSeq:NP_718862.1
ProteinModelPortal:Q8EC36 GeneID:1170993 KEGG:son:SO_3308
PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 148/470 (31%), Positives = 228/470 (48%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A L F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAFLSGYEFIVVDTG 58
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 271
G++ T I + A + + + +FM D R+GL DL + + LR Q
Sbjct: 59 GID--GTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR--QKTTF 114
Query: 272 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML- 329
V NK + + + A AE LG G+ ++A G G+T + E AL P E +
Sbjct: 115 VVANKIDGIDADS-----ACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIE 169
Query: 330 RVLNDSCTQNNSSTQDVTSPEDDESK-LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 388
R + T++ E + LP++LAI+G+PNVGKSTL N +L E+RV+V E
Sbjct: 170 RQGEEEEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDE 229
Query: 389 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 447
G TRDS+ + E GR ++DTAG +R K + SV+++ K + A+VV L++D
Sbjct: 230 PGTTRDSIYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIID 289
Query: 448 AEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 497
A E A ++ GR LV+ VNK D + + +K+ V E+ + +
Sbjct: 290 AREGVAEQDLGLLGFALNAGRALVIAVNKWD--------GIDQGIKDRVKSELDRRLGFI 341
Query: 498 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQP 556
+ F SAL G G + + + Y R+ TS L R ++ H +
Sbjct: 342 DFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRV 401
Query: 557 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
K+KY PP V + L D+ R++ + + G PI++
Sbjct: 402 KLKYAHAGGYNPPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQL 451
>UNIPROTKB|Q9KTW7 [details] [associations]
symbol:der "GTPase Der" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 154/478 (32%), Positives = 239/478 (50%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 270
G++ + + + A + + + +FM+D R+GL D + + LR+ KP
Sbjct: 59 GID--GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIE---KPA 113
Query: 271 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 329
I+ +NK + + A+AE LG I+A G G+ L + L P E
Sbjct: 114 ILVVNKVDGI-----DADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMES 168
Query: 330 RV--LNDSCTQNNSSTQDVT-SPEDDESK------LPLQLAIVGRPNVGKSTLLNALLQE 380
L D + + + + S E+ E++ LP++LAI+GRPNVGKSTL N +L E
Sbjct: 169 EQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGE 228
Query: 381 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 439
+RV+V G TRDS+ + + R L+DTAG +R++ + SV+++ + + A
Sbjct: 229 ERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDA 288
Query: 440 HVVALVLDAEE-VR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 489
+VV LV+DA E + A+ GR +V+ VNK D LS VKE V +E
Sbjct: 289 NVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFD--------VKEHVKKE 340
Query: 490 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 549
+ + V + F SAL G G + V + Y+ R+ TS L R ++ H
Sbjct: 341 LDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQP 400
Query: 550 KD-QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
+ + K+KY PP V + L D+ R+L ++ ++ G PIRI
Sbjct: 401 PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRI 458
>TIGR_CMR|VC_0763 [details] [associations]
symbol:VC_0763 "GTP-binding protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 154/478 (32%), Positives = 239/478 (50%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 270
G++ + + + A + + + +FM+D R+GL D + + LR+ KP
Sbjct: 59 GID--GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIE---KPA 113
Query: 271 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 329
I+ +NK + + A+AE LG I+A G G+ L + L P E
Sbjct: 114 ILVVNKVDGI-----DADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMES 168
Query: 330 RV--LNDSCTQNNSSTQDVT-SPEDDESK------LPLQLAIVGRPNVGKSTLLNALLQE 380
L D + + + + S E+ E++ LP++LAI+GRPNVGKSTL N +L E
Sbjct: 169 EQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGE 228
Query: 381 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 439
+RV+V G TRDS+ + + R L+DTAG +R++ + SV+++ + + A
Sbjct: 229 ERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDA 288
Query: 440 HVVALVLDAEE-VR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 489
+VV LV+DA E + A+ GR +V+ VNK D LS VKE V +E
Sbjct: 289 NVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFD--------VKEHVKKE 340
Query: 490 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 549
+ + V + F SAL G G + V + Y+ R+ TS L R ++ H
Sbjct: 341 LDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQP 400
Query: 550 KD-QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
+ + K+KY PP V + L D+ R+L ++ ++ G PIRI
Sbjct: 401 PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRI 458
>UNIPROTKB|Q81SW9 [details] [associations]
symbol:der "GTPase Der" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042254 RefSeq:NP_843976.1
RefSeq:YP_018148.1 RefSeq:YP_027683.1 ProteinModelPortal:Q81SW9
SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 316 (116.3 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 89/274 (32%), Positives = 147/274 (53%)
Query: 350 EDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYL 409
ED + ++ +++GRPNVGKS+L+NALL ++RV+V AG TRD+V + G+ +
Sbjct: 168 EDGYDEDTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVI 227
Query: 410 VDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE--VR--------AVEEGR 458
+DTAG ++ K + SV+++ + + R+ VV +VLD EE + A + GR
Sbjct: 228 IDTAGMRKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGR 287
Query: 459 GLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMH 518
+V++VNK D + +++ K +E + Q + P+VF SA + R R +
Sbjct: 288 AVVIVVNKWDAV--KKDEKTMKAFEENIRAHFQFL----EYAPIVFLSA-KTRKRTQTLI 340
Query: 519 QVIDTY-QKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKYFTQVKARPPTFVAFLS 576
VID + +R+ T+ LN + + + + ++ KI Y TQV +PPTFV F++
Sbjct: 341 PVIDEVNESHSIRIQTNVLNDVIMDAVAMNPTPTHNGSRLKIFYATQVAVKPPTFVVFVN 400
Query: 577 GKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 610
+ L + RFL L+E F G PI I R+
Sbjct: 401 DPELLHFSYERFLKNRLRESFGFVGTPIHIIARA 434
Score = 181 (68.8 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 55/177 (31%), Positives = 88/177 (49%)
Query: 154 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 213
P + I+GRPNVGKS +FNR++ R ++V + P VTRD + + F ++D+ G+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPG--VTRDRIYSAGEWLNHEFNIIDTGGI 61
Query: 214 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 272
+ L + + + IFM + R G+ D EV K L + KP+V
Sbjct: 62 DIG--DEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSN---KPVVL 116
Query: 273 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALR--PSVED 326
A+NK ++ + + LGFG+P IS GLG+ +L EA + P +E+
Sbjct: 117 AVNKVDN-----PEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDEAAQHFPKIEE 168
>TIGR_CMR|BA_1525 [details] [associations]
symbol:BA_1525 "GTPase family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0042254
RefSeq:NP_843976.1 RefSeq:YP_018148.1 RefSeq:YP_027683.1
ProteinModelPortal:Q81SW9 SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 316 (116.3 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 89/274 (32%), Positives = 147/274 (53%)
Query: 350 EDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYL 409
ED + ++ +++GRPNVGKS+L+NALL ++RV+V AG TRD+V + G+ +
Sbjct: 168 EDGYDEDTIRFSLIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVI 227
Query: 410 VDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE--VR--------AVEEGR 458
+DTAG ++ K + SV+++ + + R+ VV +VLD EE + A + GR
Sbjct: 228 IDTAGMRKKGKVYESTEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGR 287
Query: 459 GLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMH 518
+V++VNK D + +++ K +E + Q + P+VF SA + R R +
Sbjct: 288 AVVIVVNKWDAV--KKDEKTMKAFEENIRAHFQFL----EYAPIVFLSA-KTRKRTQTLI 340
Query: 519 QVIDTY-QKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKYFTQVKARPPTFVAFLS 576
VID + +R+ T+ LN + + + + ++ KI Y TQV +PPTFV F++
Sbjct: 341 PVIDEVNESHSIRIQTNVLNDVIMDAVAMNPTPTHNGSRLKIFYATQVAVKPPTFVVFVN 400
Query: 577 GKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 610
+ L + RFL L+E F G PI I R+
Sbjct: 401 DPELLHFSYERFLKNRLRESFGFVGTPIHIIARA 434
Score = 181 (68.8 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 55/177 (31%), Positives = 88/177 (49%)
Query: 154 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 213
P + I+GRPNVGKS +FNR++ R ++V + P VTRD + + F ++D+ G+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPG--VTRDRIYSAGEWLNHEFNIIDTGGI 61
Query: 214 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 272
+ L + + + IFM + R G+ D EV K L + KP+V
Sbjct: 62 DIG--DEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSN---KPVVL 116
Query: 273 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALR--PSVED 326
A+NK ++ + + LGFG+P IS GLG+ +L EA + P +E+
Sbjct: 117 AVNKVDN-----PEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDEAAQHFPKIEE 168
>UNIPROTKB|Q47WC5 [details] [associations]
symbol:der "GTPase Der" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 155/505 (30%), Positives = 239/505 (47%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
+LP V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ + F V+D+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPG--LTRDRQYGQAEVEEHPFIVIDTG 58
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 271
G+ + + + A + + + +F++D R GL D + LRK +I
Sbjct: 59 GINGDEQGIDV--KMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKI--F 114
Query: 272 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY-ML 329
V NK + +H G A A SL LG I+A G G+T+L AL P +E+
Sbjct: 115 VVANKIDGIH---GDSAVAEFYSLGLG-EHVHQIAAAHGRGVTQLLTIALTPHIEELGKP 170
Query: 330 RVLNDSCTQNNS-----STQDVTSPEDDESKL----P-----LQLAIVGRPNVGKSTLLN 375
+V ++ S +DV E++ +K P ++LAI+GRPNVGKSTL N
Sbjct: 171 KVEEGEASEGEFDDAFFSDKDVELTEEELAKKLEDEPQENDKIKLAIIGRPNVGKSTLTN 230
Query: 376 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPA--SLSVMQSR 433
+L E+RV+V G TRDSV + E GR L+DTAG ++R K SV+++
Sbjct: 231 RILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAG-IRRRKNVTDVVEKYSVIKTL 289
Query: 434 KNLMRAHVVALVLDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVK 483
+ + A+V L++DA+E + +E GR LV+ VNK D L + K
Sbjct: 290 RAIEDANVCLLIIDAQEGISDQDLSLLGFILEAGRSLVLAVNKWDGLEDHE--------K 341
Query: 484 EAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKV 543
+ + E+ + + V F SAL G G + V + + R+ T+ + + L
Sbjct: 342 DRIKTELDRRLGFIDFARVHFISALHGTGVGHLYESVEEAFVSATKRISTAMVTKILDMA 401
Query: 544 MGRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 602
+ H Q + K+KY PP + + K L + R+L ++ + G
Sbjct: 402 VFDHQPPLHQGRRIKLKYAHAGGYNPPIIIIHGNSAKKLPMSYKRYLMNYYRKSLKMMGT 461
Query: 603 PIRITQRSVPRKCGSSSSRQNTGQK 627
PIRI + T QK
Sbjct: 462 PIRIQFKDTLNPFAGKKKLNYTEQK 486
>TIGR_CMR|CPS_4247 [details] [associations]
symbol:CPS_4247 "GTP-binding protein EngA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 155/505 (30%), Positives = 239/505 (47%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
+LP V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ + F V+D+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPG--LTRDRQYGQAEVEEHPFIVIDTG 58
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 271
G+ + + + A + + + +F++D R GL D + LRK +I
Sbjct: 59 GINGDEQGIDV--KMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKI--F 114
Query: 272 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY-ML 329
V NK + +H G A A SL LG I+A G G+T+L AL P +E+
Sbjct: 115 VVANKIDGIH---GDSAVAEFYSLGLG-EHVHQIAAAHGRGVTQLLTIALTPHIEELGKP 170
Query: 330 RVLNDSCTQNNS-----STQDVTSPEDDESKL----P-----LQLAIVGRPNVGKSTLLN 375
+V ++ S +DV E++ +K P ++LAI+GRPNVGKSTL N
Sbjct: 171 KVEEGEASEGEFDDAFFSDKDVELTEEELAKKLEDEPQENDKIKLAIIGRPNVGKSTLTN 230
Query: 376 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPA--SLSVMQSR 433
+L E+RV+V G TRDSV + E GR L+DTAG ++R K SV+++
Sbjct: 231 RILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAG-IRRRKNVTDVVEKYSVIKTL 289
Query: 434 KNLMRAHVVALVLDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVK 483
+ + A+V L++DA+E + +E GR LV+ VNK D L + K
Sbjct: 290 RAIEDANVCLLIIDAQEGISDQDLSLLGFILEAGRSLVLAVNKWDGLEDHE--------K 341
Query: 484 EAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKV 543
+ + E+ + + V F SAL G G + V + + R+ T+ + + L
Sbjct: 342 DRIKTELDRRLGFIDFARVHFISALHGTGVGHLYESVEEAFVSATKRISTAMVTKILDMA 401
Query: 544 MGRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 602
+ H Q + K+KY PP + + K L + R+L ++ + G
Sbjct: 402 VFDHQPPLHQGRRIKLKYAHAGGYNPPIIIIHGNSAKKLPMSYKRYLMNYYRKSLKMMGT 461
Query: 603 PIRITQRSVPRKCGSSSSRQNTGQK 627
PIRI + T QK
Sbjct: 462 PIRIQFKDTLNPFAGKKKLNYTEQK 486
>TAIR|locus:2099277 [details] [associations]
symbol:emb2738 "embryo defective 2738" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG1160 HOGENOM:HOG000242861 OMA:IEWISSS Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
EMBL:BT046184 IPI:IPI00529367 RefSeq:NP_187815.2 UniGene:At.21430
ProteinModelPortal:B5X565 SMR:B5X565 STRING:B5X565 PaxDb:B5X565
PRIDE:B5X565 EnsemblPlants:AT3G12080.1 GeneID:820382
KEGG:ath:AT3G12080 TAIR:At3g12080 PhylomeDB:B5X565
ProtClustDB:CLSN2918072 Genevestigator:B5X565 Uniprot:B5X565
Length = 663
Score = 352 (129.0 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 110/367 (29%), Positives = 186/367 (50%)
Query: 291 AAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPE 350
A+E LGF PI ISA +G G EL + + + L ++ + E
Sbjct: 318 ASEFWSLGF-TPIPISALSGTGTGELLDLVCSGL--IKLEIMEN------------IEEE 362
Query: 351 DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYL 409
++E+ +P +AI+GRPNVGKS++LNAL++EDR +V P +G TRD++ F G L
Sbjct: 363 EEENYIPA-IAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRL 421
Query: 410 VDTAGWLQREKEKGPAS----LSVMQSRKNLMRAHVVALVLDA------EEVRAVE---- 455
+DTAG ++ S +SV ++ + + R+ VVALV++A ++++ E
Sbjct: 422 IDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIER 481
Query: 456 EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIA 515
EG+G +V+VNK D + + N ++ V ++++++ P+V+++A+ G
Sbjct: 482 EGKGCLVVVNKWDTIPNK-NQETAAHYEDDVREKLRSL----KWAPIVYSTAITGHSVDN 536
Query: 516 VMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYFTQVKARPPTFVA 573
++ ++ RL T+ LN+ +R+ + S + ++ Y TQ RPPTFV
Sbjct: 537 IVVAAATVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAIRPPTFVF 596
Query: 574 FLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC---GSSSSRQNTGQKVGR 630
F++ K SD R++ K L+ D G PIR+ RS R G + + G R
Sbjct: 597 FVNDAKLFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGTMRMAGLTRQR 656
Query: 631 TFSDKRT 637
+ KRT
Sbjct: 657 NLATKRT 663
Score = 151 (58.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 42/101 (41%), Positives = 58/101 (57%)
Query: 147 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 206
+I +LL V I+GRPNVGKSALFNRL+ A+V + P VTRD G + GD F
Sbjct: 152 QIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPG--VTRDRLYGRSYWGDQEFV 209
Query: 207 VLDSAGLETEATSGS-ILDR-----TAGMTANVLAKTQFAI 241
V+D+ G+ T + S S +++ T GM L+ + AI
Sbjct: 210 VVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAAI 250
Score = 140 (54.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 37/138 (26%), Positives = 72/138 (52%)
Query: 151 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDI--REGLAKLGDLRFKVL 208
N +P + IIGRPNVGKS++ N L+R +V +P TRD E G+ +F+++
Sbjct: 366 NYIPAIAIIGRPNVGKSSILNALVREDRTIV--SPVSGTTRDAIDAEFTGPDGE-KFRLI 422
Query: 209 DSAGLETEATSGSILDRTAGMTAN----VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 264
D+AG+ +++ S T M+ N + ++ +I+ + + DL++ + + +
Sbjct: 423 DTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIERE 482
Query: 265 APQIKPIVAMNKCESLHN 282
+V +NK +++ N
Sbjct: 483 GKGC--LVVVNKWDTIPN 498
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 299 FGDPIAISAETGLGMTELYEALRPSVEDYMLRV-----LNDSCTQNNSSTQDVTSPEDDE 353
F D + + + ++ L + R V DY + + D + + + +
Sbjct: 91 FADDYSDDEDDSIDISVLEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNT 150
Query: 354 SKLP---LQ-LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYL 409
++P LQ +AIVGRPNVGKS L N L+ E+R +V E G+TRD + + + +
Sbjct: 151 QQIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVV 210
Query: 410 VDTAG 414
VDT G
Sbjct: 211 VDTGG 215
Score = 122 (48.0 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 37/98 (37%), Positives = 55/98 (56%)
Query: 221 SILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESL 280
S++++ A TA V ++ IF++D ++G D+E+ WLRK+ I+A+NKCES
Sbjct: 255 SMIEKQA--TAAV-DESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESP 311
Query: 281 HNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE 318
G A+E LGF PI ISA +G G EL +
Sbjct: 312 RKGLMQ----ASEFWSLGF-TPIPISALSGTGTGELLD 344
>UNIPROTKB|Q83C83 [details] [associations]
symbol:der "GTPase Der" species:227377 "Coxiella burnetii
RSA 493" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 273 (101.2 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 84/273 (30%), Positives = 137/273 (50%)
Query: 353 ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDT 412
E ++ +++A++GRPNVGKSTL+N LL E+RV+V + G TRDS+ + F L+DT
Sbjct: 171 EKEVGIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDT 230
Query: 413 AGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLV 461
AG +R K + S+++S + + A VV +LDA + R VE G L+
Sbjct: 231 AGIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLI 290
Query: 462 VIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVI 521
+ VNK D L+ + V+ A+ + + P V F SAL G G + +
Sbjct: 291 IAVNKWDGLNIEERD----NVRNAIDRRM----PFVDFARRYFISALHGTGVGKLFRAIQ 342
Query: 522 DTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKYFTQVKARPP-TFVAFLSGKK 579
++YQ L T +L R L K + H + + +++Y + AR P T V K
Sbjct: 343 ESYQSIQQELTTGQLTRALEKAVAEHEPPLVKGRRIRLRY-AHLGARHPLTIVVHGKQTK 401
Query: 580 TLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 612
+L + R+L ++ F+ G+P+ I ++ P
Sbjct: 402 SLPQSYSRYLANYFRKTFNFIGVPVHIKLKTDP 434
Score = 216 (81.1 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 57/166 (34%), Positives = 90/166 (54%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
+LP + I+GRPNVGKS LFN L + R ALV + P VTRD + G + R ++D+
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPG--VTRDRQYGETTIDSQRLLLVDTG 58
Query: 212 GL-ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 270
GL +TE + L T + ++ +F++D ++GL P D + + LRK +I
Sbjct: 59 GLVDTENKEVAPLAET--QVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKI-- 114
Query: 271 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTEL 316
+A+NK + A ++ LGFG+P I+A +G G+ +L
Sbjct: 115 FLAVNKADRAR-----AAVVQSDFYKLGFGEPYVIAAASGRGVKDL 155
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 130 VEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHV 189
V+D + L P + I+ + + +IGRPNVGKS L NRL+ +VY+ P
Sbjct: 152 VKDLMTQVLENLPEEKEVIEKEVGIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPG--T 209
Query: 190 TRD-IREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTA-NVLAKTQFAIFMIDVR 247
TRD I A+ D + ++D+AG+ A +++ + + + + IF++D R
Sbjct: 210 TRDSIYIPFAR-NDENYTLIDTAGIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDAR 268
Query: 248 SGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLM--LGFGDPIAI 305
G+ DL + + + + I+A+NK + L+ A + M + F I
Sbjct: 269 QGVTEQDLRLLNRIVEAGVSL--IIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFI 326
Query: 306 SAETGLGMTELYEALRPSVEDYMLRVLNDSCTQ 338
SA G G+ +L+ A++ S + + T+
Sbjct: 327 SALHGTGVGKLFRAIQESYQSIQQELTTGQLTR 359
Score = 137 (53.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/122 (36%), Positives = 62/122 (50%)
Query: 356 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 415
LP+ +AIVGRPNVGKSTL N L + LV G+TRD + + LVDT G
Sbjct: 2 LPV-IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 416 LQRE-KEKGP-ASLSVMQSRKN----LMRAHVVALVLDAEEV---RAVEEGRGLVVIVNK 466
+ E KE P A V Q+ L A ++ A+E+ R ++G+ + + VNK
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120
Query: 467 MD 468
D
Sbjct: 121 AD 122
Score = 40 (19.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 471 SGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 502
SGR L +V E +P+E + VI + GI +
Sbjct: 148 SGRGVKDLMTQVLENLPEE-KEVIEKEVGIKI 178
>TIGR_CMR|CBU_1245 [details] [associations]
symbol:CBU_1245 "GTP-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 273 (101.2 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 84/273 (30%), Positives = 137/273 (50%)
Query: 353 ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDT 412
E ++ +++A++GRPNVGKSTL+N LL E+RV+V + G TRDS+ + F L+DT
Sbjct: 171 EKEVGIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDT 230
Query: 413 AGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLV 461
AG +R K + S+++S + + A VV +LDA + R VE G L+
Sbjct: 231 AGIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLI 290
Query: 462 VIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVI 521
+ VNK D L+ + V+ A+ + + P V F SAL G G + +
Sbjct: 291 IAVNKWDGLNIEERD----NVRNAIDRRM----PFVDFARRYFISALHGTGVGKLFRAIQ 342
Query: 522 DTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKYFTQVKARPP-TFVAFLSGKK 579
++YQ L T +L R L K + H + + +++Y + AR P T V K
Sbjct: 343 ESYQSIQQELTTGQLTRALEKAVAEHEPPLVKGRRIRLRY-AHLGARHPLTIVVHGKQTK 401
Query: 580 TLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 612
+L + R+L ++ F+ G+P+ I ++ P
Sbjct: 402 SLPQSYSRYLANYFRKTFNFIGVPVHIKLKTDP 434
Score = 216 (81.1 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 57/166 (34%), Positives = 90/166 (54%)
Query: 152 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 211
+LP + I+GRPNVGKS LFN L + R ALV + P VTRD + G + R ++D+
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPG--VTRDRQYGETTIDSQRLLLVDTG 58
Query: 212 GL-ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 270
GL +TE + L T + ++ +F++D ++GL P D + + LRK +I
Sbjct: 59 GLVDTENKEVAPLAET--QVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKI-- 114
Query: 271 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTEL 316
+A+NK + A ++ LGFG+P I+A +G G+ +L
Sbjct: 115 FLAVNKADRAR-----AAVVQSDFYKLGFGEPYVIAAASGRGVKDL 155
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 130 VEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHV 189
V+D + L P + I+ + + +IGRPNVGKS L NRL+ +VY+ P
Sbjct: 152 VKDLMTQVLENLPEEKEVIEKEVGIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPG--T 209
Query: 190 TRD-IREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTA-NVLAKTQFAIFMIDVR 247
TRD I A+ D + ++D+AG+ A +++ + + + + IF++D R
Sbjct: 210 TRDSIYIPFAR-NDENYTLIDTAGIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDAR 268
Query: 248 SGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLM--LGFGDPIAI 305
G+ DL + + + + I+A+NK + L+ A + M + F I
Sbjct: 269 QGVTEQDLRLLNRIVEAGVSL--IIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFI 326
Query: 306 SAETGLGMTELYEALRPSVEDYMLRVLNDSCTQ 338
SA G G+ +L+ A++ S + + T+
Sbjct: 327 SALHGTGVGKLFRAIQESYQSIQQELTTGQLTR 359
Score = 137 (53.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/122 (36%), Positives = 62/122 (50%)
Query: 356 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 415
LP+ +AIVGRPNVGKSTL N L + LV G+TRD + + LVDT G
Sbjct: 2 LPV-IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 416 LQRE-KEKGP-ASLSVMQSRKN----LMRAHVVALVLDAEEV---RAVEEGRGLVVIVNK 466
+ E KE P A V Q+ L A ++ A+E+ R ++G+ + + VNK
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120
Query: 467 MD 468
D
Sbjct: 121 AD 122
Score = 40 (19.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 471 SGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 502
SGR L +V E +P+E + VI + GI +
Sbjct: 148 SGRGVKDLMTQVLENLPEE-KEVIEKEVGIKI 178
>UNIPROTKB|P64057 [details] [associations]
symbol:der "GTPase Der" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0042254 EMBL:BX842577 GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:H70504 RefSeq:NP_216229.1 RefSeq:NP_336210.1
RefSeq:YP_006515108.1 ProteinModelPortal:P64057 SMR:P64057
PRIDE:P64057 EnsemblBacteria:EBMYCT00000000320
EnsemblBacteria:EBMYCT00000071863 GeneID:13316498 GeneID:885086
GeneID:923951 KEGG:mtc:MT1753 KEGG:mtu:Rv1713 KEGG:mtv:RVBD_1713
PATRIC:18125608 TubercuList:Rv1713 OMA:NCFLVIN ProtClustDB:PRK03003
Uniprot:P64057
Length = 463
Score = 288 (106.4 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 91/273 (33%), Positives = 134/273 (49%)
Query: 357 PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWL 416
P ++A+VG+PNVGKS+LLN L + R +V AG T D V E G VDTAG L
Sbjct: 199 PRRVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIELGGDVWRFVDTAG-L 257
Query: 417 QRE--KEKGPASLSVMQSRKNLMRAHVVALVLDA------EEVRAV----EEGRGLVVIV 464
+R+ + G + +++ + A V +++DA +++R + E GR LV+
Sbjct: 258 RRKVGQASGHEFYASVRTHAAIDSAEVAIVLIDASQPLTEQDLRVISMVIEAGRALVLAY 317
Query: 465 NKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 524
NK DL+ + +E + +EI + QV V SA GR ++ + D
Sbjct: 318 NKWDLVDEDR--------RELLQREIDRELVQVRWAQRVNISAKTGRAVHKLVPAMEDAL 369
Query: 525 QKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKYFTQVKARPPTFVAFLSGKKTLSD 583
W R+ T LN WL +V + QP+I + TQ ARPPTFV F +G L
Sbjct: 370 ASWDTRIATGPLNTWLTEVTAATPPPVRGGKQPRILFATQATARPPTFVLFTTG--FLEA 427
Query: 584 AELRFLTKSLKEDFDLGGIPIRITQRSVPRKCG 616
RFL + L+E F G PIR+ R ++ G
Sbjct: 428 GYRRFLERRLRETFGFDGSPIRVNVRVREKRAG 460
Score = 181 (68.8 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 62/169 (36%), Positives = 84/169 (49%)
Query: 154 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 213
P V ++GRPNVGKS L NR++ RREA+V + P VTRD A RF V D+ G
Sbjct: 27 PVVAVVGRPNVGKSTLVNRILGRREAVVQDIPG--VTRDRVCYDALWTGRRFVVQDTGGW 84
Query: 214 ETEATSGSILDRTAGMTANVLAKTQFAIFMI-DVRSGLHPLDLEVGKWLRKHAPQIKPI- 271
E A L R A+V +T A+ ++ D G D + L + KP+
Sbjct: 85 EPNAKG---LQRLVAEQASVAMRTADAVILVVDAGVGATAADEAAARILLRSG---KPVF 138
Query: 272 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 320
+A NK +S G AA SL G G+P AISA G G+ +L + +
Sbjct: 139 LAANKVDS---EKGESDAAALWSL--GLGEPHAISAMHGRGVADLLDGV 182
Score = 150 (57.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 48/148 (32%), Positives = 69/148 (46%)
Query: 340 NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH 399
+ S + E ES +A+VGRPNVGKSTL+N +L +V G+TRD V
Sbjct: 9 DESDWQLDDSEIAESGAAPVVAVVGRPNVGKSTLVNRILGRREAVVQDIPGVTRDRVCYD 68
Query: 400 FEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDA-------EEVR 452
+ GR + DT GW KG L Q+ + A V LV+DA +E
Sbjct: 69 ALWTGRRFVVQDTGGW--EPNAKGLQRLVAEQASVAMRTADAVILVVDAGVGATAADEAA 126
Query: 453 A---VEEGRGLVVIVNKMDLLSGRQNSA 477
A + G+ + + NK+D G ++A
Sbjct: 127 ARILLRSGKPVFLAANKVDSEKGESDAA 154
Score = 128 (50.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 49/195 (25%), Positives = 92/195 (47%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
V ++G+PNVGKS+L N+L + ++V+ T D + L +LG ++ +D+AGL
Sbjct: 202 VALVGKPNVGKSSLLNKLAGDQRSVVHEAAG--TTVDPVDSLIELGGDVWRFVDTAGLRR 259
Query: 216 EATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
+ S + A + T + + AI +ID L DL V + + + ++A
Sbjct: 260 KVGQASGHEFYASVRTHAAIDSAEVAIVLIDASQPLTEQDLRVISMVIEAGRAL--VLAY 317
Query: 275 NKCESLHNGTGSLAGAAA--ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV- 331
NK + + L E + + + + ISA+TG + +L A+ ++ + R+
Sbjct: 318 NKWDLVDEDRRELLQREIDRELVQVRWAQRVNISAKTGRAVHKLVPAMEDALASWDTRIA 377
Query: 332 ---LNDSCTQNNSST 343
LN T+ ++T
Sbjct: 378 TGPLNTWLTEVTAAT 392
>DICTYBASE|DDB_G0279259 [details] [associations]
symbol:DDB_G0279259 "putative GTP-binding protein"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0279259 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AAFI02000030 eggNOG:COG1160 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
RefSeq:XP_641756.1 ProteinModelPortal:Q54X21 STRING:Q54X21
EnsemblProtists:DDB0205682 GeneID:8621954 KEGG:ddi:DDB_G0279259
InParanoid:Q54X21 Uniprot:Q54X21
Length = 841
Score = 346 (126.9 bits), Expect = 7.4e-34, Sum P(2) = 7.4e-34
Identities = 112/361 (31%), Positives = 188/361 (52%)
Query: 129 VVEDHKVKPLYEKPVDFTKID-INLLPTVMIIGRPNVGKSALFNRLIR-RREALVYNTPD 186
+ E +K + ++P + I+ P + IIG+PNVGKS +FNR+I +R ALV P
Sbjct: 127 IEETNKQQQQQQQPYQRVLMKPISNKPVIAIIGKPNVGKSTIFNRIIEGQRRALVEEIPG 186
Query: 187 DHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMT---ANVLAKTQFAI-F 242
TRD G L F ++D+ GL E+ D+ G+ A + + AI F
Sbjct: 187 --TTRDRYYGEGFLYGREFILVDTGGLIGESKEDK--DQFQGVIQDQAEIAMEEADAILF 242
Query: 243 MIDVRSGLHPLDLEVGKWLRKHAPQI-KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFG 300
++D +SGL +D E+ + LR ++ KPI + +NK +++ + LGFG
Sbjct: 243 VLDYKSGLTSIDKELARMLRSKRQKLGKPIYIGVNKADNVSMRGEDFEEMKTQITRLGFG 302
Query: 301 DPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQL 360
+PI SA G + ++E + S +M + S + + E+D P+++
Sbjct: 303 EPIPFSAHHGDNVHSMFELIL-SQFPHM-----------DLSLEKL---EEDLKPGPIRI 347
Query: 361 AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQG-RTVYLVDTAGWLQRE 419
+IVG+PN GKS+LLN +++E+R +V G T D V +F ++ + L+DTAG +R
Sbjct: 348 SIVGQPNAGKSSLLNKIIEEERSIVSDIPGTTHDPVDCNFLWRDTHELSLIDTAGIRRRS 407
Query: 420 KEK-GPASLSVMQSRKNLMRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMD 468
K G SV+ + K + ++HVV +V+DA ++++ VE + +++IVNK D
Sbjct: 408 THKIGLEKSSVLWALKAIEKSHVVFIVIDATIGITEQDLKIASFVVENRKSMIIIVNKWD 467
Query: 469 L 469
L
Sbjct: 468 L 468
Score = 128 (50.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 38/122 (31%), Positives = 54/122 (44%)
Query: 333 NDSCTQNNSSTQDVTSPEDDESKLPLQ----LAIVGRPNVGKSTLLNALLQ-EDRVLVGP 387
N + + N Q P P+ +AI+G+PNVGKST+ N +++ + R LV
Sbjct: 124 NKNIEETNKQQQQQQQPYQRVLMKPISNKPVIAIIGKPNVGKSTIFNRIIEGQRRALVEE 183
Query: 388 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLM--RAHVVALV 445
G TRD GR LVDT G + KE V+Q + + A + V
Sbjct: 184 IPGTTRDRYYGEGFLYGREFILVDTGGLIGESKEDKDQFQGVIQDQAEIAMEEADAILFV 243
Query: 446 LD 447
LD
Sbjct: 244 LD 245
Score = 99 (39.9 bits), Expect = 7.4e-34, Sum P(2) = 7.4e-34
Identities = 32/141 (22%), Positives = 67/141 (47%)
Query: 489 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 548
E+++ + + P++FTSA G + I + + +L + L ++ V +H
Sbjct: 696 ELRSKLSFLDFAPILFTSAKTGFCVPTAVDLSIKIFFEREKKLRVAELIEIIKLVSFKHK 755
Query: 549 WKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI--- 604
+ K+K+ Q + PPTFV +++ + + +RFL +S+++ + G PI
Sbjct: 756 FPKMGRNTLKLKFAQQARGYPPTFVFWVNHPDNVEPSVVRFLLRSIRDYYPFVGTPIYVQ 815
Query: 605 ----RITQRSVPRKCGSSSSR 621
R ++ +K SSS++
Sbjct: 816 FRKNRANKKKFYKKVSSSSNK 836
>TIGR_CMR|CJE_0435 [details] [associations]
symbol:CJE_0435 "GTPase family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0042254 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_178454.1 HSSP:Q9X1F8
ProteinModelPortal:Q5HW81 STRING:Q5HW81 GeneID:3231197
KEGG:cjr:CJE0435 PATRIC:20042570 OMA:YLENTYR
BioCyc:CJEJ195099:GJC0-440-MONOMER Uniprot:Q5HW81
Length = 460
Score = 365 (133.5 bits), Expect = 6.1e-33, P = 6.1e-33
Identities = 123/474 (25%), Positives = 226/474 (47%)
Query: 153 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPD-DHVTRDIREGLAKLGDLRFKVLDSA 211
+ ++++IG+PNVGKS+LFNR+ R+R A+ T D TRD + + + ++DS
Sbjct: 1 MQSIILIGKPNVGKSSLFNRMARQRIAI---TSDISGTTRDTNKTQIHIHSKKAMLIDSG 57
Query: 212 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 271
GL+ S + T V ++ ++++D + D + L+K KPI
Sbjct: 58 GLDE---SDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFYSLKKLG---KPI 111
Query: 272 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYML 329
+ +NK ++ + A E G + +S +G+ ELYE L + E++++
Sbjct: 112 ALVINKVDNKKDEE-----RAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFLHEEFLI 166
Query: 330 RVLNDSCT---QNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 386
++ + ++ E D++ + ++ IVGR NVGKS+LLNAL++++R +V
Sbjct: 167 PDEEENLEDFLEYYEEGKEFQFKEVDQNHI--RVGIVGRVNVGKSSLLNALVKQERSVVS 224
Query: 387 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVL 446
AG T D V ++ + + VDTAG +R K +G ++ ++ K L + + LVL
Sbjct: 225 SIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSHSQIALLVL 284
Query: 447 DAEE-VRAVEE---GR------GLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 496
DA E ++E G G+++++NK D + K VKE + +
Sbjct: 285 DAHEGFNELDERIAGLVAKHYLGVIIVLNKWD----KSEMDFDKTVKELRLDRFKFL--- 337
Query: 497 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQ 555
PV+ SAL G+ ++ +++ ++ + ++ TS+LN + H D
Sbjct: 338 -AYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRAHPLPHDYGKL 396
Query: 556 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 609
KI Y Q PP ++ K L + R+L ++++F+ G+P+ I R
Sbjct: 397 VKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR 450
>GENEDB_PFALCIPARUM|PFL0835w [details] [associations]
symbol:PFL0835w "GTP-binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 246 (91.7 bits), Expect = 9.5e-30, Sum P(2) = 9.5e-30
Identities = 81/330 (24%), Positives = 158/330 (47%)
Query: 291 AAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPE 350
A E LGFG+P S G G++E+ + ++ + +D + N+
Sbjct: 522 AQEFWSLGFGNPFPCSGIHGNGLSEILDECIKHIDKIKINEEHDDINEQNT--------- 572
Query: 351 DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVY- 408
+ ++ +G+PN GKS++LN +L +R +V P AG T DS+ V + Q +Y
Sbjct: 573 -------INISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYR 625
Query: 409 LVDTAGWLQREKEKGPAS-------LSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLV 461
L+DTAG +Q+ K+ P + L ++ K + R+ V LV+D+ + ++
Sbjct: 626 LIDTAG-IQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIAR 684
Query: 462 VIV--NKMDLLSGRQNSALYKR--VKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVM 517
IV NK ++ + +Y + + + ++ + ++F SA + + +
Sbjct: 685 KIVQENKSCIICCNKWDLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIF 744
Query: 518 HQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLS 576
H +TY+ + R+ T+ LN +++ ++ R ++ I Y Q +PP+FV F +
Sbjct: 745 HLAEETYKNYTKRVNTNTLNDIIKEALLLRPPIPIKNKSLNIYYAFQSHIKPPSFVFFCN 804
Query: 577 GKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
+K++ ++L ++E FD+ G PI+I
Sbjct: 805 SEKSVYANYTKYLENKIREAFDIKGTPIKI 834
Score = 168 (64.2 bits), Expect = 9.5e-30, Sum P(2) = 9.5e-30
Identities = 55/159 (34%), Positives = 89/159 (55%)
Query: 111 VVQNEA-LEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSAL 169
++QN + ED ++ D E++K K +K V+ I NL P + IIGRPNVGKS +
Sbjct: 271 IIQNNSNQEDIQID---DVQTEENK-KNKKKKDVELNIIR-NL-PLISIIGRPNVGKSTI 324
Query: 170 FNRLIRRRE--ALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL--ETEATSGSILDR 225
FNRL R+ + ++V + TRD G + +F+++D+ GL E E S I D+
Sbjct: 325 FNRLTRKYQDGSIVLDVSS---TRDKLYGEVEWEGYKFELVDTGGLVFEQEKFSKEIKDQ 381
Query: 226 TAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 264
+ A L ++ IF++D G+ P D+E+ ++LRK+
Sbjct: 382 I--LMA--LKESSVVIFVVDGIHGVDPRDIEICRFLRKY 416
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 54/222 (24%), Positives = 100/222 (45%)
Query: 132 DHKVKPLYEKPVDFTKIDINLLPTVMI--IGRPNVGKSALFNRLIRRREALVYNTPDDHV 189
D +K + + ++ DIN T+ I IG+PN GKS++ N+++ +V +P
Sbjct: 549 DECIKHIDKIKINEEHDDINEQNTINISFIGKPNTGKSSILNKILNCNRFIV--SPLAGT 606
Query: 190 TRDIREGLAKL--GDLRFKVLDSAGLETEATSGSILDRTA------GMTANVLAKTQFAI 241
T D + L KL D ++++D+AG++ + ++T T + ++ I
Sbjct: 607 TVDSIDVLVKLKQSDRIYRLIDTAGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCI 666
Query: 242 FMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLML--- 297
+ID +G+ D+ + RK + K I+ NK + ++N L L
Sbjct: 667 LVIDSFNGISTQDINIA---RKIVQENKSCIICCNKWDLIYNKNDIFNDTKNYVLNLLKP 723
Query: 298 -GFGDPIAISAETGLGMTELYEALRPSVEDYMLRV----LND 334
F + I ISA+T + ++ + ++Y RV LND
Sbjct: 724 IDFSNIIFISAKTSQRLLNIFHLAEETYKNYTKRVNTNTLND 765
Score = 123 (48.4 bits), Expect = 0.00067, P = 0.00067
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 305 ISAETGLGMTELYEALRPSVEDYMLR-VLNDSCTQNNSSTQDVTSPEDDESK-------- 355
IS + +Y+ + S + Y+ ++ ++ Q + DV + E+ ++K
Sbjct: 244 ISNSQEINHNYIYDKEKRSSKTYIPNNIIQNNSNQEDIQIDDVQTEENKKNKKKKDVELN 303
Query: 356 ----LPLQLAIVGRPNVGKSTLLNALLQ--EDRVLVGPEAGLTRDSVRVHFEYQGRTVYL 409
LPL ++I+GRPNVGKST+ N L + +D +V + TRD + E++G L
Sbjct: 304 IIRNLPL-ISIIGRPNVGKSTIFNRLTRKYQDGSIV-LDVSSTRDKLYGEVEWEGYKFEL 361
Query: 410 VDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVV--IVNKM 467
VDT G L E+EK + Q L + VV V+D + V+ R + + + K
Sbjct: 362 VDTGG-LVFEQEKFSKEIKD-QILMALKESSVVIFVVDG--IHGVDP-RDIEICRFLRKY 416
Query: 468 DLLSGRQNSALYKRVKE 484
LL Q + K+ ++
Sbjct: 417 ILLKHPQGKYINKKEQQ 433
>UNIPROTKB|Q8I5N5 [details] [associations]
symbol:PFL0835w "GTP binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 246 (91.7 bits), Expect = 9.5e-30, Sum P(2) = 9.5e-30
Identities = 81/330 (24%), Positives = 158/330 (47%)
Query: 291 AAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPE 350
A E LGFG+P S G G++E+ + ++ + +D + N+
Sbjct: 522 AQEFWSLGFGNPFPCSGIHGNGLSEILDECIKHIDKIKINEEHDDINEQNT--------- 572
Query: 351 DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVY- 408
+ ++ +G+PN GKS++LN +L +R +V P AG T DS+ V + Q +Y
Sbjct: 573 -------INISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYR 625
Query: 409 LVDTAGWLQREKEKGPAS-------LSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLV 461
L+DTAG +Q+ K+ P + L ++ K + R+ V LV+D+ + ++
Sbjct: 626 LIDTAG-IQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIAR 684
Query: 462 VIV--NKMDLLSGRQNSALYKR--VKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVM 517
IV NK ++ + +Y + + + ++ + ++F SA + + +
Sbjct: 685 KIVQENKSCIICCNKWDLIYNKNDIFNDTKNYVLNLLKPIDFSNIIFISAKTSQRLLNIF 744
Query: 518 HQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLS 576
H +TY+ + R+ T+ LN +++ ++ R ++ I Y Q +PP+FV F +
Sbjct: 745 HLAEETYKNYTKRVNTNTLNDIIKEALLLRPPIPIKNKSLNIYYAFQSHIKPPSFVFFCN 804
Query: 577 GKKTLSDAELRFLTKSLKEDFDLGGIPIRI 606
+K++ ++L ++E FD+ G PI+I
Sbjct: 805 SEKSVYANYTKYLENKIREAFDIKGTPIKI 834
Score = 168 (64.2 bits), Expect = 9.5e-30, Sum P(2) = 9.5e-30
Identities = 55/159 (34%), Positives = 89/159 (55%)
Query: 111 VVQNEA-LEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSAL 169
++QN + ED ++ D E++K K +K V+ I NL P + IIGRPNVGKS +
Sbjct: 271 IIQNNSNQEDIQID---DVQTEENK-KNKKKKDVELNIIR-NL-PLISIIGRPNVGKSTI 324
Query: 170 FNRLIRRRE--ALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL--ETEATSGSILDR 225
FNRL R+ + ++V + TRD G + +F+++D+ GL E E S I D+
Sbjct: 325 FNRLTRKYQDGSIVLDVSS---TRDKLYGEVEWEGYKFELVDTGGLVFEQEKFSKEIKDQ 381
Query: 226 TAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 264
+ A L ++ IF++D G+ P D+E+ ++LRK+
Sbjct: 382 I--LMA--LKESSVVIFVVDGIHGVDPRDIEICRFLRKY 416
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 54/222 (24%), Positives = 100/222 (45%)
Query: 132 DHKVKPLYEKPVDFTKIDINLLPTVMI--IGRPNVGKSALFNRLIRRREALVYNTPDDHV 189
D +K + + ++ DIN T+ I IG+PN GKS++ N+++ +V +P
Sbjct: 549 DECIKHIDKIKINEEHDDINEQNTINISFIGKPNTGKSSILNKILNCNRFIV--SPLAGT 606
Query: 190 TRDIREGLAKL--GDLRFKVLDSAGLETEATSGSILDRTA------GMTANVLAKTQFAI 241
T D + L KL D ++++D+AG++ + ++T T + ++ I
Sbjct: 607 TVDSIDVLVKLKQSDRIYRLIDTAGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCI 666
Query: 242 FMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLML--- 297
+ID +G+ D+ + RK + K I+ NK + ++N L L
Sbjct: 667 LVIDSFNGISTQDINIA---RKIVQENKSCIICCNKWDLIYNKNDIFNDTKNYVLNLLKP 723
Query: 298 -GFGDPIAISAETGLGMTELYEALRPSVEDYMLRV----LND 334
F + I ISA+T + ++ + ++Y RV LND
Sbjct: 724 IDFSNIIFISAKTSQRLLNIFHLAEETYKNYTKRVNTNTLND 765
Score = 123 (48.4 bits), Expect = 0.00067, P = 0.00067
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 305 ISAETGLGMTELYEALRPSVEDYMLR-VLNDSCTQNNSSTQDVTSPEDDESK-------- 355
IS + +Y+ + S + Y+ ++ ++ Q + DV + E+ ++K
Sbjct: 244 ISNSQEINHNYIYDKEKRSSKTYIPNNIIQNNSNQEDIQIDDVQTEENKKNKKKKDVELN 303
Query: 356 ----LPLQLAIVGRPNVGKSTLLNALLQ--EDRVLVGPEAGLTRDSVRVHFEYQGRTVYL 409
LPL ++I+GRPNVGKST+ N L + +D +V + TRD + E++G L
Sbjct: 304 IIRNLPL-ISIIGRPNVGKSTIFNRLTRKYQDGSIV-LDVSSTRDKLYGEVEWEGYKFEL 361
Query: 410 VDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVV--IVNKM 467
VDT G L E+EK + Q L + VV V+D + V+ R + + + K
Sbjct: 362 VDTGG-LVFEQEKFSKEIKD-QILMALKESSVVIFVVDG--IHGVDP-RDIEICRFLRKY 416
Query: 468 DLLSGRQNSALYKRVKE 484
LL Q + K+ ++
Sbjct: 417 ILLKHPQGKYINKKEQQ 433
>UNIPROTKB|Q2GDM7 [details] [associations]
symbol:NSE_0536 "GTPase Der" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 251 (93.4 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 74/280 (26%), Positives = 149/280 (53%)
Query: 344 QDVTSPED-DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY 402
+ + +P++ E + +++AI+G+PNVGKS+L+N + +DRVLV P AG TRD + ++
Sbjct: 159 EQLDTPKNGSEEQRRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQW 218
Query: 403 QGRTVYLVDTAGWLQREK-----EKGPASLSVMQSRKN---LMRAHVVALVLDAEEV--- 451
+ T LVDTAG ++++ EK S ++ S ++ + + L+ ++
Sbjct: 219 KCTTFELVDTAGLRKKQRVTDGLEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLM 278
Query: 452 -RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEG 510
R +E+G+ ++++ NK D + + + +K+ + + Q +I + IP+ F S L
Sbjct: 279 NRILEQGKPMILVGNKKDAVDAIE----LENIKDFISLQAQKLI--ASQIPIFFISCLHE 332
Query: 511 RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPP 569
++ + + + T RLN WL++++ RH +++ K+KY ++ +
Sbjct: 333 GDFSYILDECRRLHDDSKRNISTHRLNMWLQEIVRRHPHPMVNSKAVKLKYIKKLLNK-- 390
Query: 570 TFVAFLSGKKT--LSDAELRFLTKSLKEDFDLGGIPIRIT 607
FV LS + ++++ L ++ SL DF + GIP+ +T
Sbjct: 391 -FVFVLSANRPELVAESYLNYVRNSLIRDFRICGIPVTLT 429
Score = 123 (48.4 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 37/135 (27%), Positives = 64/135 (47%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDSAGLE 214
V I+G+ NVGKS LFN++ + + ++ + VTRD+ L D + +LD+AG
Sbjct: 7 VSIVGKANVGKSTLFNKMAKEKRSITMDRKG--VTRDVVVRRISLSDGKSLLLLDTAGFN 64
Query: 215 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
+ T T + ++ +F+ID + + D+ WLR++A K ++
Sbjct: 65 PQHPE------TVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVC 116
Query: 275 NKCESLHNGTGSLAG 289
NK + SL G
Sbjct: 117 NKSDRKDRDDCSLFG 131
Score = 79 (32.9 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 40/168 (23%), Positives = 67/168 (39%)
Query: 189 VTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRS 248
VTRD+ L D + +L L+T + + T T + ++ +F+ID +
Sbjct: 38 VTRDVVVRRISLSDGKSLLL----LDTAGFNPQHPE-TVERTEYAIKESDMVLFVIDNK- 91
Query: 249 GLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAE 308
+ D+ WLR++A K ++ NK + SL GF + ISAE
Sbjct: 92 -IDSEDMLFANWLRRNAGNSKIVLVCNKSDRKDRDDCSL---------FGFQNVFLISAE 141
Query: 309 TGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKL 356
LG+ EL + + + + N S Q + P +S L
Sbjct: 142 HSLGLRELISYIESFIPEQLDTPKNGSEEQRRIKVAILGQPNVGKSSL 189
>TIGR_CMR|NSE_0536 [details] [associations]
symbol:NSE_0536 "putative GTP-binding protein EngA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0005525
"GTP binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 251 (93.4 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 74/280 (26%), Positives = 149/280 (53%)
Query: 344 QDVTSPED-DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY 402
+ + +P++ E + +++AI+G+PNVGKS+L+N + +DRVLV P AG TRD + ++
Sbjct: 159 EQLDTPKNGSEEQRRIKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQW 218
Query: 403 QGRTVYLVDTAGWLQREK-----EKGPASLSVMQSRKN---LMRAHVVALVLDAEEV--- 451
+ T LVDTAG ++++ EK S ++ S ++ + + L+ ++
Sbjct: 219 KCTTFELVDTAGLRKKQRVTDGLEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLM 278
Query: 452 -RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEG 510
R +E+G+ ++++ NK D + + + +K+ + + Q +I + IP+ F S L
Sbjct: 279 NRILEQGKPMILVGNKKDAVDAIE----LENIKDFISLQAQKLI--ASQIPIFFISCLHE 332
Query: 511 RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPP 569
++ + + + T RLN WL++++ RH +++ K+KY ++ +
Sbjct: 333 GDFSYILDECRRLHDDSKRNISTHRLNMWLQEIVRRHPHPMVNSKAVKLKYIKKLLNK-- 390
Query: 570 TFVAFLSGKKT--LSDAELRFLTKSLKEDFDLGGIPIRIT 607
FV LS + ++++ L ++ SL DF + GIP+ +T
Sbjct: 391 -FVFVLSANRPELVAESYLNYVRNSLIRDFRICGIPVTLT 429
Score = 123 (48.4 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 37/135 (27%), Positives = 64/135 (47%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDSAGLE 214
V I+G+ NVGKS LFN++ + + ++ + VTRD+ L D + +LD+AG
Sbjct: 7 VSIVGKANVGKSTLFNKMAKEKRSITMDRKG--VTRDVVVRRISLSDGKSLLLLDTAGFN 64
Query: 215 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
+ T T + ++ +F+ID + + D+ WLR++A K ++
Sbjct: 65 PQHPE------TVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVC 116
Query: 275 NKCESLHNGTGSLAG 289
NK + SL G
Sbjct: 117 NKSDRKDRDDCSLFG 131
Score = 79 (32.9 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 40/168 (23%), Positives = 67/168 (39%)
Query: 189 VTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRS 248
VTRD+ L D + +L L+T + + T T + ++ +F+ID +
Sbjct: 38 VTRDVVVRRISLSDGKSLLL----LDTAGFNPQHPE-TVERTEYAIKESDMVLFVIDNK- 91
Query: 249 GLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAE 308
+ D+ WLR++A K ++ NK + SL GF + ISAE
Sbjct: 92 -IDSEDMLFANWLRRNAGNSKIVLVCNKSDRKDRDDCSL---------FGFQNVFLISAE 141
Query: 309 TGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKL 356
LG+ EL + + + + N S Q + P +S L
Sbjct: 142 HSLGLRELISYIESFIPEQLDTPKNGSEEQRRIKVAILGQPNVGKSSL 189
>TIGR_CMR|BA_5734 [details] [associations]
symbol:BA_5734 "tRNA modification GTPase TrmE"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291
RefSeq:NP_847879.1 RefSeq:YP_031574.1 RefSeq:YP_052661.1
ProteinModelPortal:Q81JD9 DNASU:1085503
EnsemblBacteria:EBBACT00000010687 EnsemblBacteria:EBBACT00000014942
EnsemblBacteria:EBBACT00000021840 GeneID:1085503 GeneID:2820766
GeneID:2848296 KEGG:ban:BA_5734 KEGG:bar:GBAA_5734 KEGG:bat:BAS5337
HOGENOM:HOG000200713 OMA:IDFPEEV
BioCyc:BANT260799:GJAJ-5414-MONOMER
BioCyc:BANT261594:GJ7F-5590-MONOMER Uniprot:Q81JD9
Length = 458
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/157 (35%), Positives = 86/157 (54%)
Query: 324 VEDYMLRVLNDSCTQNNSSTQDV--TSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 381
VE+ +L + T + + TS + + + AI+GRPNVGKS+LLN+L+QE
Sbjct: 185 VEEMTHNILIEKATHVRAEIAKILETSKQGKILREGIATAIIGRPNVGKSSLLNSLVQEK 244
Query: 382 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHV 441
+ +V AG TRD + + +G + L+DTAG RE E + V +S++ + +A +
Sbjct: 245 KAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGI--RETEDVVERIGVERSKEMMSQADL 302
Query: 442 VALVL---------DAEEVRAVEEGRGLVVIVNKMDL 469
V +V+ D E RAV+ G+ +VIVNK DL
Sbjct: 303 VLVVVNYSETLTNEDEELFRAVQ-GKDFIVIVNKTDL 338
>TAIR|locus:2029406 [details] [associations]
symbol:AT1G78010 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006897 "endocytosis" evidence=RCA]
HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0007264 GO:GO:0003924 GO:GO:0005622
GO:GO:0006400 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HOGENOM:HOG000200713 OMA:IDFPEEV EMBL:BT015351 EMBL:BT015722
IPI:IPI00546429 RefSeq:NP_177924.3 UniGene:At.21626
ProteinModelPortal:Q66GQ1 SMR:Q66GQ1 STRING:Q66GQ1 PaxDb:Q66GQ1
PRIDE:Q66GQ1 EnsemblPlants:AT1G78010.1 GeneID:844136
KEGG:ath:AT1G78010 TAIR:At1g78010 InParanoid:Q66GQ1
PhylomeDB:Q66GQ1 ProtClustDB:CLSN2680810 Genevestigator:Q66GQ1
Uniprot:Q66GQ1
Length = 560
Score = 189 (71.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 72/220 (32%), Positives = 111/220 (50%)
Query: 284 TGSLAGAAAESLMLGFGDPI-AISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQN-NS 341
+ + A AA E + GF + ++ A+ +TE+ EA R ED M + +S S
Sbjct: 239 SSAAADAALEGIQGGFSSLVKSLRAQCIELLTEI-EA-RLDFEDEMPPLDIESVINKITS 296
Query: 342 STQDVTSPEDDES--KL---PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSV 396
+QDV S D + KL LQ+AIVGRPNVGKS+LLNA + +R +V AG TRD V
Sbjct: 297 MSQDVESALDTANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVV 356
Query: 397 RVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVL---------D 447
+ +G + L+DTAG RE + V +S A V+ + + D
Sbjct: 357 EANVTVRGVPITLLDTAGI--RETNDIVEKIGVERSETAAKVADVIIMAVSAVEGWTEED 414
Query: 448 AEEVRAVEEGRGLVVIVNKMDLLS-GRQNSALYKRVKEAV 486
E +R ++ + +++++NK+D G + +R KE V
Sbjct: 415 TELLRKIQSDKPMILVMNKIDCAPPGSCDQLEDQRKKEEV 454
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 46/167 (27%), Positives = 76/167 (45%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
+ I+GRPNVGKS+L N + A+V T TRD+ E + + +LD+AG+
Sbjct: 320 IAIVGRPNVGKSSLLNAWSKSERAIV--TEVAGTTRDVVEANVTVRGVPITLLDTAGIRE 377
Query: 216 EATSGSILDRTAGMTANVLAKTQFAIFM-IDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 274
+ I+++ + AK I M + G D E+ + ++ P I + M
Sbjct: 378 ---TNDIVEKIGVERSETAAKVADVIIMAVSAVEGWTEEDTELLRKIQSDKPMI---LVM 431
Query: 275 NKCESLHNGT-GSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 320
NK + G+ L + + F + SA TG G+ EL +A+
Sbjct: 432 NKIDCAPPGSCDQLEDQRKKEEV--FHKSVFTSAVTGQGIEELEDAI 476
>TIGR_CMR|CJE_1036 [details] [associations]
symbol:CJE_1036 "tRNA modification GTPase TrmE"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:YP_179032.1 ProteinModelPortal:Q5HUK3
STRING:Q5HUK3 GeneID:3231546 KEGG:cjr:CJE1036 PATRIC:20043873
BioCyc:CJEJ195099:GJC0-1063-MONOMER Uniprot:Q5HUK3
Length = 442
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/140 (32%), Positives = 78/140 (55%)
Query: 328 MLRVLNDSCTQNNSSTQDVTSPEDDESKL--PLQLAIVGRPNVGKSTLLNALLQEDRVLV 385
+L ++ C +N+ +++ + + L ++AIVG+PNVGKS+LLNALL +R +V
Sbjct: 183 LLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERAIV 242
Query: 386 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALV 445
AG TRD++ F+ + ++DTAG RE + + V S+K+L A ++ V
Sbjct: 243 SDIAGTTRDTIEESFKLGTHLLRIIDTAGI--RESKDVIEQIGVALSKKSLEDADIILAV 300
Query: 446 LDAEEVRAVEEGRGLVVIVN 465
DA V+ E+ + ++ N
Sbjct: 301 FDASRVQDKEDEKIFDLLAN 320
>TIGR_CMR|CHY_0006 [details] [associations]
symbol:CHY_0006 "tRNA modification GTPase TrmE"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
OMA:PGEFSEQ HOGENOM:HOG000200713 RefSeq:YP_358878.1
ProteinModelPortal:Q3AG56 STRING:Q3AG56 GeneID:3727714
KEGG:chy:CHY_0006 PATRIC:21273213 BioCyc:CHYD246194:GJCN-6-MONOMER
Uniprot:Q3AG56
Length = 461
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 52/134 (38%), Positives = 76/134 (56%)
Query: 362 IVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE 421
I G+PNVGKS+LLNALL++ R +V G TRD + + +G V +VDTAG RE E
Sbjct: 227 IAGKPNVGKSSLLNALLRKKRAIVTDIPGTTRDVIEDYLNLKGIPVKIVDTAGI--RETE 284
Query: 422 KGPASLSVMQSRKNLMRAHVVALVLDA--------EEVRA-VEEGRGLVVIVNKMDLLSG 472
L V ++R+ L +A V V+D E++ + + + + L+VI NK+DLL G
Sbjct: 285 DLVEKLGVEKTREYLNQADVTLFVVDVSIGIDEDDEKILSLINKDKSLLVI-NKIDLLQG 343
Query: 473 RQNSALYKRVKEAV 486
+ N Y VK +
Sbjct: 344 KVNFEQYA-VKTGI 356
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 53/175 (30%), Positives = 89/175 (50%)
Query: 155 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL- 213
T +I G+PNVGKS+L N L+R++ A+V + P TRD+ E L + K++D+AG+
Sbjct: 224 TAVIAGKPNVGKSSLLNALLRKKRAIVTDIPG--TTRDVIEDYLNLKGIPVKIVDTAGIR 281
Query: 214 ETEATSGSILDRTA-GMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 272
ETE ++++ T L + +F++DV G+ D ++ + K K ++
Sbjct: 282 ETE----DLVEKLGVEKTREYLNQADVTLFVVDVSIGIDEDDEKILSLINKD----KSLL 333
Query: 273 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTE--LYEALRPSVE 325
+NK + L G + A ++ + F P + GL + E LYE L P E
Sbjct: 334 VINKIDLLQ-GKVNFEQYAVKTGIKNFV-PFSARNFEGLEILENKLYEILIPEQE 386
>UNIPROTKB|P75104 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:272634
"Mycoplasma pneumoniae M129" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0046872 GO:GO:0003924 GO:GO:0006400 EMBL:U00089
GenomeReviews:U00089_GR eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 OMA:IDFPEEV PIR:S73472 RefSeq:NP_109696.1
ProteinModelPortal:P75104 IntAct:P75104 GeneID:877349
KEGG:mpn:MPN008 PATRIC:20021289 BioCyc:MPNE272634:GJ6Z-8-MONOMER
Uniprot:P75104
Length = 442
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 325 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKL--PLQLAIVGRPNVGKSTLLNALLQEDR 382
E L +N + Q + +D +L P ++AI+G NVGKS+LLNALL +D+
Sbjct: 183 EQRELVTMNQAVVQITQILNQIVVGQDQLQRLKDPFKIAIIGNTNVGKSSLLNALLDQDK 242
Query: 383 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVV 442
+V G TRD V F G V ++DTAG Q + A + ++ + A++V
Sbjct: 243 AIVSAIKGSTRDIVEGDFALNGHFVKILDTAGIRQHQSALEKAG--IQKTFGAIKTANLV 300
Query: 443 ALVLDAEE 450
+LDA +
Sbjct: 301 IYLLDARQ 308
>CGD|CAL0004408 [details] [associations]
symbol:orf19.2042 species:5476 "Candida albicans" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:1900524 "positive
regulation of flocculation via cell wall protein-carbohydrate
interaction by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070899 "mitochondrial
tRNA wobble uridine modification" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 CGD:CAL0004408 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0005622 GO:GO:0006400 EMBL:AACQ01000031
EMBL:AACQ01000030 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:XP_719491.1 RefSeq:XP_719616.1 ProteinModelPortal:Q5AD25
STRING:Q5AD25 GeneID:3638773 GeneID:3638809 KEGG:cal:CaO19.2042
KEGG:cal:CaO19.9590 Uniprot:Q5AD25
Length = 529
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 326 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKL--PLQLAIVGRPNVGKSTLLNALLQEDRV 383
D M+R + ++ + S + S L +QLA++G PN GKS++LN L +D
Sbjct: 246 DRMIRDVKENIAKIESEIKAYLSKVKSSQILLNGIQLALLGPPNAGKSSILNILANKDAA 305
Query: 384 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVA 443
+V AG TRD + + E G V + DTAG E+ + ++++ M A V
Sbjct: 306 IVSEIAGTTRDILDIPLEIGGYKVVVGDTAGIRSFEEADSIEQEGIKRAKQRSMLADFVI 365
Query: 444 LVLDAEEVRA------------VEEGRGLVVIVNKMDLLSGRQNSAL--YKRVKEAVPQE 489
+VLD V V+ + +++++NK DL + R + Y R+ + +P+
Sbjct: 366 VVLDPMSVEKEPLELKEHLKTLVKANKQMLIVLNKQDLFASRSEEMISNYSRLLD-LPKN 424
Query: 490 IQTVIPQVTG 499
V+ TG
Sbjct: 425 YFHVVSCSTG 434
>UNIPROTKB|Q8EH80 [details] [associations]
symbol:era "GTPase Era" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
HSSP:Q9X1F8 SUPFAM:SSF54814 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ HOGENOM:HOG000245597
RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80 GeneID:1169170
KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 146 (56.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 47/180 (26%), Positives = 84/180 (46%)
Query: 149 DINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVL 208
D+ V IIGRPNVGKS L NRL+ ++ ++ P TR G+ G + +
Sbjct: 41 DVTYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQ--TTRHRIMGIHTDGPRQIVFI 98
Query: 209 DSAGL--ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAP 266
D+ GL E + +++R A A+ LA IF++D + ++ + K LR+
Sbjct: 99 DTPGLHIEEQRAINRLMNRAA---ASSLADVSMVIFVVDGMTWTADDEMVLSK-LRRGGE 154
Query: 267 QIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 326
+ K ++A+NK +++ + + F + + ISA G + + E S+ +
Sbjct: 155 ERKTVLAINKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPE 214
>TIGR_CMR|SO_1349 [details] [associations]
symbol:SO_1349 "GTP-binding protein Era" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80
GeneID:1169170 KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 146 (56.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 47/180 (26%), Positives = 84/180 (46%)
Query: 149 DINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVL 208
D+ V IIGRPNVGKS L NRL+ ++ ++ P TR G+ G + +
Sbjct: 41 DVTYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQ--TTRHRIMGIHTDGPRQIVFI 98
Query: 209 DSAGL--ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAP 266
D+ GL E + +++R A A+ LA IF++D + ++ + K LR+
Sbjct: 99 DTPGLHIEEQRAINRLMNRAA---ASSLADVSMVIFVVDGMTWTADDEMVLSK-LRRGGE 154
Query: 267 QIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 326
+ K ++A+NK +++ + + F + + ISA G + + E S+ +
Sbjct: 155 ERKTVLAINKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPE 214
>ZFIN|ZDB-GENE-050522-335 [details] [associations]
symbol:gtpbp3 "GTP binding protein 3" species:7955
"Danio rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 ZFIN:ZDB-GENE-050522-335 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
EMBL:BC095801 IPI:IPI00500987 RefSeq:NP_001018605.1
UniGene:Dr.41738 HSSP:P25522 ProteinModelPortal:Q501Z5 SMR:Q501Z5
STRING:Q501Z5 GeneID:553807 KEGG:dre:553807 CTD:84705
eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
InParanoid:Q501Z5 KO:K03650 OrthoDB:EOG4WH8KW NextBio:20880525
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 Uniprot:Q501Z5
Length = 500
Score = 149 (57.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 58/215 (26%), Positives = 99/215 (46%)
Query: 324 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQED 381
+ED +L ++ + Q + ++ S E +L + + I G N GKS+LLN L Q
Sbjct: 213 IEDGVLNDVDRAVQQLQTDMENHLSDERRGERLRSGVHVVIAGSTNAGKSSLLNLLTQRP 272
Query: 382 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHV 441
+V P AG TRD + V + G V L DTAG R+ V ++R+ + +A +
Sbjct: 273 AAIVSPTAGTTRDVLEVPLDIGGYPVLLSDTAGL--RDTSDSVEQEGVRRARQRVEQADL 330
Query: 442 VALVLDAEEVRAVEEGRGLVVIV-----NKMDLLSGRQNSALYKRVKEAVPQE----IQT 492
+V+D ++ + E R + V + N ++ S +Q L + V E IQT
Sbjct: 331 SLVVVDLTQLPS--ERRHVPVFLRGHLKNILERSSQQQQHILILNESDLVSAEQQRSIQT 388
Query: 493 VIPQVTGIP-VVFTSALEGRGR---IAVMHQVIDT 523
+ +++G P F S G + ++H + T
Sbjct: 389 SLQELSGAPSACFLSCHSRDGLEELLTLLHNTLKT 423
>TIGR_CMR|GSU_3465 [details] [associations]
symbol:GSU_3465 "tRNA modification GTPase TrmE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:NP_954505.1 ProteinModelPortal:Q746Q3
GeneID:2686588 KEGG:gsu:GSU3465 PATRIC:22029787
BioCyc:GSUL243231:GH27-3432-MONOMER Uniprot:Q746Q3
Length = 456
Score = 148 (57.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 42/116 (36%), Positives = 62/116 (53%)
Query: 362 IVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE 421
I G+PNVGKS+LLN LLQE R +V G TRD + +G + ++DTAG R+ E
Sbjct: 225 IAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGI--RDTE 282
Query: 422 KGPASLSVMQSRKNLMRAHVVALVLDA-----EEVRAVEE---GRGLVVIVNKMDL 469
V + + + A +V LV+D E+ R + G+ L+++ NK DL
Sbjct: 283 DIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKRLILVENKCDL 338
Score = 138 (53.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
V+I G+PNVGKS+L N L++ + A+V + P TRDI E + + L +++D+AG+
Sbjct: 223 VLIAGKPNVGKSSLLNTLLQEKRAIVTSVPG--TTRDIIEEVVNIRGLPLRMIDTAGIRD 280
Query: 216 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 275
T + +T + + + +ID G PLD E + + + I+ N
Sbjct: 281 --TEDIVEKEGVRLTLEKIPEADLVLLVID---GSRPLD-EDDRMILSALAGKRLILVEN 334
Query: 276 KCE 278
KC+
Sbjct: 335 KCD 337
>UNIPROTKB|P25522 [details] [associations]
symbol:mnmE "GTP-binding protein with a role in
modification of tRNA" species:83333 "Escherichia coli K-12"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009268 "response to pH" evidence=IMP] [GO:0030488 "tRNA
methylation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IEA;IDA] [GO:0005525 "GTP binding" evidence=IEA;IDA]
[GO:0006805 "xenobiotic metabolic process" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0003924 GO:GO:0009268
GO:GO:0006805 EMBL:L10328 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
EMBL:S57109 PIR:A38160 PIR:C65173 RefSeq:NP_418162.1
RefSeq:YP_491728.1 PDB:1RFL PDB:2GJ8 PDB:2GJ9 PDB:2GJA PDBsum:1RFL
PDBsum:2GJ8 PDBsum:2GJ9 PDBsum:2GJA ProteinModelPortal:P25522
SMR:P25522 DIP:DIP-11033N IntAct:P25522 PRIDE:P25522
EnsemblBacteria:EBESCT00000002643 EnsemblBacteria:EBESCT00000017912
GeneID:12932528 GeneID:948222 KEGG:ecj:Y75_p3466 KEGG:eco:b3706
PATRIC:32122909 EchoBASE:EB0990 EcoGene:EG10997
BioCyc:EcoCyc:EG10997-MONOMER BioCyc:ECOL316407:JW3684-MONOMER
EvolutionaryTrace:P25522 Genevestigator:P25522 GO:GO:0030488
Uniprot:P25522
Length = 454
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+++ I GRPN GKS+LLNAL + +V AG TRD +R H G ++++DTAG
Sbjct: 217 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL-- 274
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVE 455
RE + + ++ + + +A V ++D AV+
Sbjct: 275 REASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVD 312
>UNIPROTKB|Q9KVY5 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/98 (31%), Positives = 54/98 (55%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+++ I GRPN GKS+LLNAL ++ +V AG TRD +R H G ++++DTAG
Sbjct: 216 MKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL-- 273
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVE 455
R+ + + ++ + + +A V ++D A +
Sbjct: 274 RDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATD 311
>TIGR_CMR|VC_0003 [details] [associations]
symbol:VC_0003 "thiophene and furan oxidation protein ThdF"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/98 (31%), Positives = 54/98 (55%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+++ I GRPN GKS+LLNAL ++ +V AG TRD +R H G ++++DTAG
Sbjct: 216 MKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGL-- 273
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVE 455
R+ + + ++ + + +A V ++D A +
Sbjct: 274 RDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATD 311
>TIGR_CMR|SO_0003 [details] [associations]
symbol:SO_0003 "tRNA modification GTPase TrmE"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0008175 "tRNA methyltransferase
activity" evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 RefSeq:NP_715645.2 ProteinModelPortal:Q8CX52
GeneID:1167901 KEGG:son:SO_0003 PATRIC:23519697 Uniprot:Q8CX52
Length = 453
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+++ I GRPN GKS+LLNAL ++ +V AG TRD +R H G ++++DTAG
Sbjct: 216 MKVVIAGRPNAGKSSLLNALAGKESAIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGL-- 273
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVE 455
R+ + + ++ + A V ++D AV+
Sbjct: 274 RDTTDTVEQIGIERAWNEINSADRVLFMVDGTTTTAVD 311
>ASPGD|ASPL0000007078 [details] [associations]
symbol:AN6522 species:162425 "Emericella nidulans"
[GO:0070899 "mitochondrial tRNA wobble uridine modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0046872
GO:GO:0003924 GO:GO:0005622 EMBL:BN001301 EMBL:AACD01000109
GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OrthoDB:EOG4B2X62 RefSeq:XP_664126.1 ProteinModelPortal:Q5AYV8
STRING:Q5AYV8 EnsemblFungi:CADANIAT00007294 GeneID:2870683
KEGG:ani:AN6522.2 OMA:FSEDQHF Uniprot:Q5AYV8
Length = 614
Score = 125 (49.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+++A++G PN GKS+LLN ++ + +V E G TRD V V + G L D AG
Sbjct: 291 IKVALLGAPNAGKSSLLNRIVGREAAIVSTEEGTTRDIVDVGIDLGGWYCKLGDMAGIRS 350
Query: 418 REKEKGPASLSVM---QSRKNLMRAHVVALVLDAEEVR-AVEEG 457
P S++ ++ + RA A+ D V +VEEG
Sbjct: 351 EPSSNSPGGASLVIGSVEKEGIRRARARAMASDVVVVVISVEEG 394
Score = 110 (43.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
V ++G PN GKS+L NR++ R A+V + ++ TRDI + LG K+ D AG+ +
Sbjct: 293 VALLGAPNAGKSSLLNRIVGREAAIV--STEEGTTRDIVDVGIDLGGWYCKLGDMAGIRS 350
Query: 216 EATSGS 221
E +S S
Sbjct: 351 EPSSNS 356
Score = 64 (27.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 445 VLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVF 504
V+DA V G+ ++V +NK D L S +V + Q++ + P+V V
Sbjct: 409 VVDAAN-ECVRAGKQIIVAINKCDRLPPLDQSEA-SQVPHEIAQKVNQIFPEVPKKRVFG 466
Query: 505 TSALE 509
S LE
Sbjct: 467 ISCLE 471
>SGD|S000004625 [details] [associations]
symbol:MSS1 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0070899
"mitochondrial tRNA wobble uridine modification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
SGD:S000004625 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005743 GO:GO:0003924 EMBL:BK006946 EMBL:Z49211
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH GeneTree:ENSGT00390000016851 OrthoDB:EOG4B2X62
EMBL:X69481 EMBL:DQ834923 PIR:S54025 RefSeq:NP_013736.1
ProteinModelPortal:P32559 SMR:P32559 DIP:DIP-5882N IntAct:P32559
MINT:MINT-2788166 STRING:P32559 PaxDb:P32559 EnsemblFungi:YMR023C
GeneID:855037 KEGG:sce:YMR023C CYGD:YMR023c NextBio:978251
Genevestigator:P32559 GermOnline:YMR023C GO:GO:0070899
Uniprot:P32559
Length = 526
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 35/139 (25%), Positives = 75/139 (53%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
++L ++G PNVGKS+L+N+L +D +V G TRDS+ G V + DTAG +
Sbjct: 275 IKLVLLGAPNVGKSSLVNSLTNDDISIVSDIPGTTRDSIDAMINVNGYKVIICDTAGIRE 334
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAV--EE-----------GRGLVVIV 464
+ +K L + +++K +++ + ++D ++ + E+ + ++++V
Sbjct: 335 KSSDK-IEMLGIDRAKKKSVQSDLCLFIVDPTDLSKLLPEDILAHLSSKTFGNKRIIIVV 393
Query: 465 NKMDLLSGRQNSALYKRVK 483
NK DL+S + + + +++
Sbjct: 394 NKSDLVSDDEMTKVLNKLQ 412
>TIGR_CMR|CPS_5049 [details] [associations]
symbol:CPS_5049 "tRNA modification GTPase TrmE"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HSSP:Q9WYA4 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_271687.1
ProteinModelPortal:Q47U36 SMR:Q47U36 STRING:Q47U36 GeneID:3518638
KEGG:cps:CPS_5049 PATRIC:21472877
BioCyc:CPSY167879:GI48-5049-MONOMER Uniprot:Q47U36
Length = 471
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 32/99 (32%), Positives = 56/99 (56%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+++ I GRPN GKS+LLNAL + +V AG TRD + G ++++DTAG
Sbjct: 224 MRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGL-- 281
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEE 456
R+ + + + ++ + + +A V L++DA E ++ E
Sbjct: 282 RDSDDVVEKIGIERAWQEINQADRVLLMVDASEDHSILE 320
>UNIPROTKB|E2RE04 [details] [associations]
symbol:GTPBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 InterPro:IPR025867 Pfam:PF12631 OMA:IRISGTH
GeneTree:ENSGT00390000016851 EMBL:AAEX03012297
Ensembl:ENSCAFT00000024419 Uniprot:E2RE04
Length = 399
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 47/157 (29%), Positives = 73/157 (46%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+ + G PN GKS+L+N L ++ +V PE G TRD + + G L DTAG RE
Sbjct: 159 IVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGL--RE 216
Query: 420 KEKGPASLS-VMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNSA- 477
GP V ++R+ L +A ++ VLDA ++ + L +V S +NS
Sbjct: 217 GA-GPVEQEGVRRARQRLEQADLILAVLDATDLASPSSRSFLDTVVVPAGAGSPSENSQR 275
Query: 478 --LYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRG 512
L + +P+ + P + P + S L G G
Sbjct: 276 LLLVLNKSDLLPRGGPDLSPHLP--PHLLLSCLTGEG 310
>WB|WBGene00009557 [details] [associations]
symbol:F39B2.7 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] [GO:0015093 "ferrous iron transmembrane
transporter activity" evidence=IEA] [GO:0015684 "ferrous iron
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0005622 GO:GO:0006400
HSSP:P25522 eggNOG:COG0486 HOGENOM:HOG000200714 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:Z92834 PIR:T21994
RefSeq:NP_493573.1 ProteinModelPortal:Q9XTZ1 SMR:Q9XTZ1
IntAct:Q9XTZ1 STRING:Q9XTZ1 PaxDb:Q9XTZ1 EnsemblMetazoa:F39B2.7.1
EnsemblMetazoa:F39B2.7.2 GeneID:3564835 KEGG:cel:CELE_F39B2.7
UCSC:F39B2.7 CTD:3564835 WormBase:F39B2.7 InParanoid:Q9XTZ1
NextBio:954161 Uniprot:Q9XTZ1
Length = 439
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
L + + GRPN GKS++LN L +D +V G TRDS+ + G L DTAG Q
Sbjct: 211 LDIVLYGRPNSGKSSILNQLAHDDVAIVSSIPGTTRDSLETIIQINGVRCRLTDTAGVRQ 270
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAE 449
+ + A + +++K + A ++ +V+D +
Sbjct: 271 KTNDVIEAE-GIRRAQKRIQSADIICVVVDPQ 301
>MGI|MGI:1917609 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 MGI:MGI:1917609 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
CTD:84705 eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
EMBL:AF361482 EMBL:AY029613 EMBL:BC092042 IPI:IPI00338388
IPI:IPI00556865 RefSeq:NP_115933.2 RefSeq:XP_003689533.1
UniGene:Mm.142112 ProteinModelPortal:Q923K4 SMR:Q923K4
STRING:Q923K4 PhosphoSite:Q923K4 PaxDb:Q923K4 PRIDE:Q923K4
Ensembl:ENSMUST00000007754 Ensembl:ENSMUST00000095259
Ensembl:ENSMUST00000150969 GeneID:100862531 GeneID:70359
KEGG:mmu:100862531 KEGG:mmu:70359 GeneTree:ENSGT00390000016851
InParanoid:Q923K4 NextBio:331446 Bgee:Q923K4 CleanEx:MM_GTPBP3
Genevestigator:Q923K4 Uniprot:Q923K4
Length = 492
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/117 (34%), Positives = 59/117 (50%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+ + G PN GKS+L+N L Q+ +V PE G TRD + + G V L DTAG RE
Sbjct: 252 VVVTGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL--RE 309
Query: 420 KEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNS 476
V ++R L +A ++ VLDA ++ + L +V LL+ Q+S
Sbjct: 310 GVGAVEQEGVRRARHRLEQADIILGVLDASDLASSSSCSFLDTVVTP--LLAQSQDS 364
>TIGR_CMR|CBU_1922 [details] [associations]
symbol:CBU_1922 "tRNA modification GTPase TrmE"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0003924
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ ProtClustDB:PRK05291 EMBL:Y10436 RefSeq:NP_820899.1
ProteinModelPortal:P94612 GeneID:1209835 KEGG:cbu:CBU_1922
PATRIC:17932577 BioCyc:CBUR227377:GJ7S-1896-MONOMER Uniprot:P94612
Length = 452
Score = 142 (55.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 43/143 (30%), Positives = 76/143 (53%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+ + I G PNVGKS+LLN L ++ +V AG TRD +R G +++VDTAG
Sbjct: 217 ITVVIAGEPNVGKSSLLNLLSGQETAIVTDIAGTTRDIIRESIHIDGLPIHVVDTAGL-- 274
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDA----EEVRAV------EEGRGL--VVIVN 465
R E V +++K + +A ++ L++DA E+ + + E + +++ N
Sbjct: 275 RLTEDVVEKEGVRRTQKAVQQADLLLLMIDASKPTEDFKKIIAQWFSENDNKIPTLIVEN 334
Query: 466 KMDLL--SGRQNSALYKRVKEAV 486
K+DL+ + R+ + Y +K +V
Sbjct: 335 KIDLIGEAPRKENKEYPHIKLSV 357
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 120 THVEPEPDGVVEDHKVKPLYEKPVDFTKIDI 150
T V+ G V D + + KP FT D+
Sbjct: 49 TFVKFRDSGSVIDEGIALYFPKPNSFTGEDV 79
>UNIPROTKB|Q969Y2 [details] [associations]
symbol:GTPBP3 "tRNA modification GTPase GTPBP3,
mitochondrial" species:9606 "Homo sapiens" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
EMBL:CH471106 EMBL:AC010463 CTD:84705 eggNOG:COG0486
HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 EMBL:AF360742
EMBL:AF361481 EMBL:AF360743 EMBL:AF360744 EMBL:AY078987
EMBL:AY078988 EMBL:AK027606 EMBL:AK291929 EMBL:AK297953
EMBL:BC017207 EMBL:BC019261 IPI:IPI00464994 IPI:IPI00644024
IPI:IPI00783945 IPI:IPI00982192 RefSeq:NP_001122327.1
RefSeq:NP_001182351.1 RefSeq:NP_116009.2 RefSeq:NP_598399.2
UniGene:Hs.334885 HSSP:Q9WYA4 ProteinModelPortal:Q969Y2 SMR:Q969Y2
IntAct:Q969Y2 MINT:MINT-2877402 STRING:Q969Y2 PhosphoSite:Q969Y2
DMDM:74731069 PaxDb:Q969Y2 PRIDE:Q969Y2 DNASU:84705
Ensembl:ENST00000324894 Ensembl:ENST00000358792
Ensembl:ENST00000361619 GeneID:84705 KEGG:hsa:84705 UCSC:uc002ngg.4
UCSC:uc002ngh.4 UCSC:uc010eas.3 GeneCards:GC19P017448
H-InvDB:HIX0014890 HGNC:HGNC:14880 HPA:HPA042158 MIM:580000
MIM:608536 neXtProt:NX_Q969Y2 PharmGKB:PA134883205 OMA:PGEFSEQ
GenomeRNAi:84705 NextBio:74792 ArrayExpress:Q969Y2 Bgee:Q969Y2
CleanEx:HS_GTPBP3 Genevestigator:Q969Y2 Uniprot:Q969Y2
Length = 492
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
+ + + G PN GKS+L+N L ++ +V PE G TRD + + G V L DTAG
Sbjct: 250 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL-- 307
Query: 418 REKEKGPASLS-VMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNS 476
RE GP V ++R+ L +A ++ +LDA ++ + L +V + S +S
Sbjct: 308 REGV-GPVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSS 366
>TIGR_CMR|NSE_0717 [details] [associations]
symbol:NSE_0717 "tRNA modification GTPase TrmE"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 SMART:SM00382
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872
GO:GO:0003924 GO:GO:0006400 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:YP_506593.1 ProteinModelPortal:Q2GD53 STRING:Q2GD53
GeneID:3931628 KEGG:nse:NSE_0717 PATRIC:22681449 OMA:IEAHIIT
ProtClustDB:CLSK2528116 BioCyc:NSEN222891:GHFU-729-MONOMER
Uniprot:Q2GD53
Length = 550
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/125 (35%), Positives = 60/125 (48%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+ IVG+PNVGKSTL N L + D +V G TRD + V + G V L DTAG +Q E
Sbjct: 215 VVIVGKPNVGKSTLFNYLAKRDLAIVTDIPGTTRDILEVRLDCHGYPVILSDTAG-IQ-E 272
Query: 420 KEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLV---VIVNKMDLLSGRQNS 476
+ + ++ K A V+ + D E+ R V VI +D RQ +
Sbjct: 273 TCDAIEKMGITRALKKATEADVIVFLRDITELHLTNVRREDVANSVIERHLD----RQVA 328
Query: 477 ALYKR 481
AL R
Sbjct: 329 ALGSR 333
>TIGR_CMR|SPO_3895 [details] [associations]
symbol:SPO_3895 "tRNA modification GTPase TrmE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0003924
GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_169083.1
ProteinModelPortal:Q5LLM7 GeneID:3196284 KEGG:sil:SPO3895
PATRIC:23381297 Uniprot:Q5LLM7
Length = 428
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 359 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR 418
++AI+G PN GKSTLLN L + L AG TRD + V + G V L+DTAG R
Sbjct: 215 EVAIIGPPNAGKSTLLNMLAGREAALTSEVAGTTRDVIEVRMDLGGLPVTLLDTAGL--R 272
Query: 419 EKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNSAL 478
E + + +R+ +A + + + + VE + ++ K D N A+
Sbjct: 273 ETGDLVEGMGIALARRRADQADLRVFLTEDVDAMGVELQPDDLHVLPKADQRPDTAN-AI 331
Query: 479 YKRVKEAVPQEIQTV 493
+ V Q +Q +
Sbjct: 332 SGVTGQGVDQLVQRI 346
>TIGR_CMR|GSU_3268 [details] [associations]
symbol:GSU_3268 "ferrous iron transport protein B"
species:243231 "Geobacter sulfurreducens PCA" [GO:0015639 "ferrous
iron uptake transmembrane transporter activity" evidence=ISS]
[GO:0015684 "ferrous iron transport" evidence=ISS]
InterPro:IPR003373 InterPro:IPR005225 InterPro:IPR011619
InterPro:IPR011640 InterPro:IPR011642 Pfam:PF02421 Pfam:PF07664
Pfam:PF07670 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0016021
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0015093
HOGENOM:HOG000054023 KO:K04759 TIGRFAMs:TIGR00437
RefSeq:NP_954309.1 ProteinModelPortal:Q747J7 GeneID:2685722
KEGG:gsu:GSU3268 PATRIC:22029377 OMA:HAHITEC ProtClustDB:CLSK924673
BioCyc:GSUL243231:GH27-3244-MONOMER Uniprot:Q747J7
Length = 747
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 58/188 (30%), Positives = 87/188 (46%)
Query: 354 SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTA 413
+K + +A+ G PN GKSTL+NA+ R+ VG AG+T + FE+QGR + LVD
Sbjct: 28 TKRAITVAVAGNPNSGKSTLINAIAGT-RLQVGNWAGVTVEKKEASFEFQGRKIRLVDLP 86
Query: 414 GWLQREKEKGPASLSVMQSRKNLM--RAHVVALVLDAEEVRAVEEGRGLVVIVNKMDL-L 470
G P + + +R L+ R ++ V+DA + R L + V ++L +
Sbjct: 87 GTYSLS----PYTQEEIIARDYLVHERPDLIINVVDATNLE-----RNLYLTVQLLELGI 137
Query: 471 SGRQNSALYKRVKEAVPQEIQTV-IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCL 529
+Y EA I I Q+ GI VV TSA G ++ V T +
Sbjct: 138 PLVMALNIYDEA-EAKGYAIDVKGIEQMLGITVVPTSATRRSGLDELLAGVDRTADDPAV 196
Query: 530 RLPTSRLN 537
P +RLN
Sbjct: 197 HTP-ARLN 203
>TIGR_CMR|ECH_0060 [details] [associations]
symbol:ECH_0060 "tRNA modification GTPase TrmE"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291 OMA:IDFPEEV
RefSeq:YP_506891.1 ProteinModelPortal:Q2GI42 STRING:Q2GI42
GeneID:3927317 KEGG:ech:ECH_0060 PATRIC:20575687
BioCyc:ECHA205920:GJNR-60-MONOMER Uniprot:Q2GI42
Length = 439
Score = 127 (49.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 326 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 385
DY+L L S S D + + + + I+G PN GKSTL N L + D +V
Sbjct: 185 DYLLNNLQKSL---ESHLND--DRRGERLRQGIYVTILGEPNSGKSTLFNHLAKRDIAIV 239
Query: 386 GPEAGLTRDSVRVHFEYQGRTVYLVDTAG 414
AG TRD + H + G + ++DTAG
Sbjct: 240 SEYAGTTRDPLEAHIDVAGYPIIIIDTAG 268
>UNIPROTKB|P06616 [details] [associations]
symbol:era "GTP-binding protein" species:83333 "Escherichia
coli K-12" [GO:0005829 "cytosol" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IDA] [GO:0070181 "SSU rRNA binding"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0005525 "GTP binding" evidence=IEA;IDA] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0006468 EMBL:D64044
EMBL:U36841 GO:GO:0042274 GO:GO:0070181 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:M14658 EMBL:X02673 PIR:S44713 RefSeq:NP_417061.1
RefSeq:YP_490794.1 PDB:1EGA PDB:3IEU PDBsum:1EGA PDBsum:3IEU
ProteinModelPortal:P06616 SMR:P06616 DIP:DIP-9521N IntAct:P06616
MINT:MINT-1248282 PhosSite:P010424 PRIDE:P06616
EnsemblBacteria:EBESCT00000004013 EnsemblBacteria:EBESCT00000004014
EnsemblBacteria:EBESCT00000015240 GeneID:12934226 GeneID:947036
KEGG:ecj:Y75_p2519 KEGG:eco:b2566 PATRIC:32120531 EchoBASE:EB0266
EcoGene:EG10270 HOGENOM:HOG000245597 BioCyc:EcoCyc:EG10270-MONOMER
BioCyc:ECOL316407:JW2550-MONOMER EvolutionaryTrace:P06616
Genevestigator:P06616 Uniprot:P06616
Length = 301
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 43/119 (36%), Positives = 63/119 (52%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS-VRVHFEYQGRTVYLVDTAGWLQR 418
+AIVGRPNVGKSTLLN LL + + +A TR V +H E + +Y VDT G L
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIY-VDTPG-LHM 68
Query: 419 EKEKGPASLSVMQSRKNLMRAHVVALVL-------DAEEV-RAVEEGRGLVVI-VNKMD 468
E+++ L + ++ +V V+ D E V + EG+ V++ VNK+D
Sbjct: 69 EEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVD 127
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 44/175 (25%), Positives = 79/175 (45%)
Query: 148 IDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKV 207
ID + + I+GRPNVGKS L N+L+ ++ ++ TR G+ G +
Sbjct: 3 IDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQ--TTRHRIVGIHTEGAYQAIY 60
Query: 208 LDSAGLETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAP 266
+D+ GL E ++R A+ + + IF+++ ++ + K AP
Sbjct: 61 VDTPGLHMEEKRA--INRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAP 118
Query: 267 QIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALR 321
I +A+NK +++ L + + F D + ISAETGL + + +R
Sbjct: 119 VI---LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVR 170
>RGD|1305367 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006400 "tRNA modification" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 RGD:1305367 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006400 CTD:84705 eggNOG:COG0486
HOGENOM:HOG000200714 HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 HSSP:Q9WYA4 GeneTree:ENSGT00390000016851
EMBL:BC087083 IPI:IPI00358231 RefSeq:NP_001011919.1
UniGene:Rn.109111 ProteinModelPortal:Q5PQQ1 STRING:Q5PQQ1
PhosphoSite:Q5PQQ1 PRIDE:Q5PQQ1 Ensembl:ENSRNOT00000060355
GeneID:290633 KEGG:rno:290633 UCSC:RGD:1305367 NextBio:631337
Genevestigator:Q5PQQ1 Uniprot:Q5PQQ1
Length = 492
Score = 133 (51.9 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+ + G PN GKS+L+N L Q+ +V PE G TRD + + G V L DTAG RE
Sbjct: 252 VVVAGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDILETPVDLAGFPVLLSDTAGL--RE 309
Query: 420 KEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 451
V ++R+ L +A ++ +LDA ++
Sbjct: 310 GAGAVEQEGVRRARQRLEQADIILGMLDASDL 341
Score = 39 (18.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 455 EEGRG-LVVIVNKMDLLS 471
+ GR L++++NK DLLS
Sbjct: 363 DSGRQRLLLLLNKSDLLS 380
>TIGR_CMR|BA_4524 [details] [associations]
symbol:BA_4524 "GTP-binding protein Era" species:198094
"Bacillus anthracis str. Ames" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814 HOGENOM:HOG000245596
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
RefSeq:NP_846747.1 RefSeq:YP_021170.1 RefSeq:YP_030447.1
ProteinModelPortal:Q81LT7 DNASU:1088253
EnsemblBacteria:EBBACT00000009432 EnsemblBacteria:EBBACT00000018443
EnsemblBacteria:EBBACT00000022023 GeneID:1088253 GeneID:2819016
GeneID:2848213 KEGG:ban:BA_4524 KEGG:bar:GBAA_4524 KEGG:bat:BAS4199
BioCyc:BANT260799:GJAJ-4255-MONOMER
BioCyc:BANT261594:GJ7F-4400-MONOMER Uniprot:Q81LT7
Length = 301
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/164 (26%), Positives = 82/164 (50%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVR-VHFEYQGRTVYLVDTAGWLQR 418
++I+GRPNVGKST LN ++ + ++ + TR+ ++ V+ E + ++ +DT G + +
Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIF-IDTPG-IHK 68
Query: 419 EKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNSAL 478
K K V ++ L +V +++A E GRG I+ K L +Q L
Sbjct: 69 PKHK-LGDFMVKMAQTTLKEVDIVLFMVNAVE----GFGRGEEFIIEK--LKETKQPVFL 121
Query: 479 Y-KRVKEAVPQEIQTVIPQVTGI----PVVFTSALEGRGRIAVM 517
++ + P+++ +I Q + +V SAL+G A++
Sbjct: 122 VINKIDQVHPEQLLELIDQYRKLHDFAEIVPISALDGNNAEALI 165
>UNIPROTKB|B5X2B8 [details] [associations]
symbol:eral1 "GTPase Era, mitochondrial" species:8030
"Salmo salar" [GO:0000028 "ribosomal small subunit assembly"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=ISS] [GO:0043024 "ribosomal
small subunit binding" evidence=ISS] InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0005759
GO:GO:0019843 GO:GO:0000028 GO:GO:0043024 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 HOVERGEN:HBG051495 EMBL:BT045187
EMBL:BT059676 RefSeq:NP_001133545.1 UniGene:Ssa.32452
ProteinModelPortal:B5X2B8 GeneID:100195044 CTD:100195044
Uniprot:B5X2B8
Length = 457
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 50/168 (29%), Positives = 78/168 (46%)
Query: 118 EDTHVEPEPDGVVEDHKVK-PLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRR 176
+DTH P V+ D + L K D + + +L V IIG PN GKS L N+L+ R
Sbjct: 75 DDTHYH-HPASVLPDSAEQLSLLVKDPDQPE-NSKVL-RVAIIGAPNAGKSTLSNQLLGR 131
Query: 177 REALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA-TSGSILDRTAGMTA-NVL 234
+ V + H TR G+ D + +LD+ GL T L+++ N +
Sbjct: 132 KVFAV--SKKVHTTRARALGVLTEDDTQIILLDTPGLTTPTKVKRHQLEKSLLEDPWNTV 189
Query: 235 AKTQFAIFMIDVRS--GLHPLDLEVGKWLRKHAPQIKPIVAMNKCESL 280
+ + M+DV + LD EV K L +H P + ++ +NK + L
Sbjct: 190 KEAGLVVVMVDVSDKWACNKLDFEVLKCLTQH-PDVPAVLVLNKVDLL 236
>UNIPROTKB|Q484S4 [details] [associations]
symbol:CPS_1703 "Ribosome biogenesis GTPase A"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 GO:GO:0005737 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG1161 Gene3D:1.10.1580.10 InterPro:IPR023179
InterPro:IPR016478 PIRSF:PIRSF006230 InterPro:IPR019991
TIGRFAMs:TIGR03596 HOGENOM:HOG000003788 KO:K14540 OMA:GMLWPRI
ProtClustDB:PRK09563 RefSeq:YP_268441.1 ProteinModelPortal:Q484S4
STRING:Q484S4 GeneID:3521267 KEGG:cps:CPS_1703 PATRIC:21466577
BioCyc:CPSY167879:GI48-1780-MONOMER Uniprot:Q484S4
Length = 310
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 349 PEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVY 408
P DE + I+G PNVGKSTLLN L+ + + VG E +T+ R+ E +G +Y
Sbjct: 106 PNKDEEGKQINAMIMGIPNVGKSTLLNTLVGKAKAKVGNEPAVTKGQQRIRLE-EG--LY 162
Query: 409 LVDTAG--WLQREKEKGPASLSVMQSRKNLMRAH 440
L DT G W + E L+V + K+ H
Sbjct: 163 LFDTPGMLWPKIANENSGYRLAVSGAVKDTAFDH 196
>TIGR_CMR|CPS_1703 [details] [associations]
symbol:CPS_1703 "GTP-binding protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG1161
Gene3D:1.10.1580.10 InterPro:IPR023179 InterPro:IPR016478
PIRSF:PIRSF006230 InterPro:IPR019991 TIGRFAMs:TIGR03596
HOGENOM:HOG000003788 KO:K14540 OMA:GMLWPRI ProtClustDB:PRK09563
RefSeq:YP_268441.1 ProteinModelPortal:Q484S4 STRING:Q484S4
GeneID:3521267 KEGG:cps:CPS_1703 PATRIC:21466577
BioCyc:CPSY167879:GI48-1780-MONOMER Uniprot:Q484S4
Length = 310
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 349 PEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVY 408
P DE + I+G PNVGKSTLLN L+ + + VG E +T+ R+ E +G +Y
Sbjct: 106 PNKDEEGKQINAMIMGIPNVGKSTLLNTLVGKAKAKVGNEPAVTKGQQRIRLE-EG--LY 162
Query: 409 LVDTAG--WLQREKEKGPASLSVMQSRKNLMRAH 440
L DT G W + E L+V + K+ H
Sbjct: 163 LFDTPGMLWPKIANENSGYRLAVSGAVKDTAFDH 196
>ZFIN|ZDB-GENE-030131-5982 [details] [associations]
symbol:gtpbp4 "GTP binding protein 4" species:7955
"Danio rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR010674 InterPro:IPR024926
Pfam:PF06858 PIRSF:PIRSF038919 PRINTS:PR00326
ZFIN:ZDB-GENE-030131-5982 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005730 GO:GO:0042254 KO:K06943 InterPro:IPR012973
Pfam:PF08155 CTD:23560 HOVERGEN:HBG052642 EMBL:BC045447
IPI:IPI00501825 RefSeq:NP_956145.1 UniGene:Dr.77165
ProteinModelPortal:Q7ZVR0 STRING:Q7ZVR0 GeneID:334050
KEGG:dre:334050 InParanoid:Q7ZVR0 NextBio:20810244
ArrayExpress:Q7ZVR0 Uniprot:Q7ZVR0
Length = 631
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 68/252 (26%), Positives = 110/252 (43%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
L + G PNVGKS+ +N + + D V V P A T+ H EY+ +VDT G L
Sbjct: 171 LLLCGYPNVGKSSFINKVTRAD-VEVQPYAFTTKSLFVGHMEYKYLRWQVVDTPGILDHP 229
Query: 420 -KEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQ---- 474
+E+ + + + +L A V V+D E + L + N L + +
Sbjct: 230 LEERNTIEMQAITALAHLRAA--VLYVMDVSEQCGHTLSQQLELFNNIRPLFANKPLIVM 287
Query: 475 -NSALYKRVKEAVPQEIQTVIPQVT--GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRL 531
N +++ E + +E Q + +T G+ V+ TS+L G + V + D R+
Sbjct: 288 ANKCDVRKISE-LSEENQKIFADLTAEGVDVIETSSLTEEGVMQVKTEACDRLLTH--RV 344
Query: 532 PTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTFV---AFLSGKKTLSDAELRF 588
T ++ + V+ R A P + KARPP F+ A L K +DA R
Sbjct: 345 DTKMKSKKVHDVLNRL----HLAIPTKR---DEKARPP-FIPEGALLRKKAMETDAPKRK 396
Query: 589 LTKSLKEDFDLG 600
L + L + +LG
Sbjct: 397 LERDL--EVELG 406
>FB|FBgn0039189 [details] [associations]
symbol:CG18528 species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0046872 GO:GO:0003924
GO:GO:0005622 GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 GeneTree:ENSGT00390000016851 EMBL:AY071544
EMBL:AY071692 RefSeq:NP_651251.3 UniGene:Dm.5798 SMR:Q9VC87
IntAct:Q9VC87 MINT:MINT-821147 STRING:Q9VC87
EnsemblMetazoa:FBtr0084628 GeneID:42906 KEGG:dme:Dmel_CG18528
UCSC:CG18528-RA FlyBase:FBgn0039189 InParanoid:Q9VC87 OMA:LTQTRHR
OrthoDB:EOG4HQC0H GenomeRNAi:42906 NextBio:831200 Uniprot:Q9VC87
Length = 493
Score = 130 (50.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 358 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 417
++ I+G PNVGKS+LLN L Q +V +AG TRD + + G V DTAG L+
Sbjct: 240 VRTVIIGAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDIIETMHNFGGYPVVFSDTAG-LR 298
Query: 418 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 451
R + +++ L+++ ++ L+ +A+ +
Sbjct: 299 RYTTDSIEQEGMQRAKNCLVQSDLILLLAEAKNI 332
Score = 39 (18.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 457 GRGLVVIVNKMDLLSGRQNSALYK 480
G+ L ++ NK D L+ ++ L K
Sbjct: 361 GKRLQLVANKTDTLTDEEHQQLDK 384
>TIGR_CMR|CPS_4121 [details] [associations]
symbol:CPS_4121 "GTP-binding protein Era" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_270776.1
ProteinModelPortal:Q47WP6 SMR:Q47WP6 STRING:Q47WP6 GeneID:3521211
KEGG:cps:CPS_4121 PATRIC:21471105
BioCyc:CPSY167879:GI48-4134-MONOMER Uniprot:Q47WP6
Length = 305
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 38/145 (26%), Positives = 69/145 (47%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+AIVGRPNVGKSTLLNALL + + + TR + + R LVDT G L E
Sbjct: 13 IAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPG-LHTE 71
Query: 420 KEKGPASLSVMQSRKNLMRAHVVALVLDA------EEV---RAVEEGRGLVVIVNKMDLL 470
+++ L + ++ ++ +++ +E+ + + G +++VNK D +
Sbjct: 72 EKRAINRLMNRAASSSIAEVELIMFLVEGTHWTKDDELVLSKVKQSGTPCILVVNKTDNI 131
Query: 471 SGRQNSALYKRVKEAVPQEIQTVIP 495
+ + L K + + ++P
Sbjct: 132 PDK-DELLPHLQKLGAMHDFRDIVP 155
>TIGR_CMR|CJE_0763 [details] [associations]
symbol:CJE_0763 "GTP-binding protein Era" species:195099
"Campylobacter jejuni RM1221" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0042254
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
eggNOG:COG1159 RefSeq:YP_178772.1 ProteinModelPortal:Q5HVB3
STRING:Q5HVB3 GeneID:3230715 KEGG:cjr:CJE0763 PATRIC:20043259
HOGENOM:HOG000245596 KO:K03595 OMA:ATRRKIN ProtClustDB:PRK00089
BioCyc:CJEJ195099:GJC0-779-MONOMER TIGRFAMs:TIGR00436
Uniprot:Q5HVB3
Length = 291
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 39/145 (26%), Positives = 67/145 (46%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
++I+GR N GKSTL+N+LL+E LV + TR ++ ++ + +DT G E
Sbjct: 6 VSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKAIVMHEKNQIIFIDTPGL--HE 63
Query: 420 KEKGPASLSVMQSRKNLMRAHVVALVLDA-EEVRAVEEGRGL------VVIVNKMDLLSG 472
L V + K++ V+ V + + E L ++ +NK+DL
Sbjct: 64 SGATLNQLLVQSAIKSMGDCDVILFVASVFDSTKDYENFLSLNPQVPHIIALNKVDLTD- 122
Query: 473 RQNSALYKRVKEAVP--QEIQTVIP 495
N+ L K++ E Q + +IP
Sbjct: 123 --NATLLKKLSEYAKFSQHFKAIIP 145
>UNIPROTKB|Q74AX3 [details] [associations]
symbol:era "GTPase Era" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 354 SKLPLQ---LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLV 410
SK P + ++I+GRPNVGKSTLLN +L E V+ + TR+ ++ G + +
Sbjct: 3 SKTPFRSGFVSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFI 62
Query: 411 DTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGR--GLV------- 461
DT G + + + V ++ ++ +V L+++A +E GL+
Sbjct: 63 DTPG-IHHARSR-LNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPV 120
Query: 462 -VIVNKMDLL 470
++VNK+DL+
Sbjct: 121 FLVVNKIDLI 130
>TIGR_CMR|GSU_2226 [details] [associations]
symbol:GSU_2226 "GTP-binding protein Era" species:243231
"Geobacter sulfurreducens PCA" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 354 SKLPLQ---LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLV 410
SK P + ++I+GRPNVGKSTLLN +L E V+ + TR+ ++ G + +
Sbjct: 3 SKTPFRSGFVSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFI 62
Query: 411 DTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGR--GLV------- 461
DT G + + + V ++ ++ +V L+++A +E GL+
Sbjct: 63 DTPG-IHHARSR-LNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPV 120
Query: 462 -VIVNKMDLL 470
++VNK+DL+
Sbjct: 121 FLVVNKIDLI 130
>UNIPROTKB|E1BH64 [details] [associations]
symbol:E1BH64 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:DAAA02019078
IPI:IPI00710937 ProteinModelPortal:E1BH64
Ensembl:ENSBTAT00000005506 Uniprot:E1BH64
Length = 493
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 360 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE 419
+ + G PN GKS+L+N L ++ +V PE G TRD + + G L DTAG RE
Sbjct: 254 VVVAGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGL--RE 311
Query: 420 KEKGPASLS-VMQSRKNLMRAHVVALVLDAEEV 451
GP V +++K L +A ++ VLDA ++
Sbjct: 312 GV-GPVEQEGVRRAQKRLEQADLILAVLDASDL 343
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 460 LVVIVNKMDLL-SGRQN 475
L++++NK DLL +GR +
Sbjct: 371 LLLVLNKSDLLPAGRSD 387
>DICTYBASE|DDB_G0288609 [details] [associations]
symbol:eral1 "GTP-binding protein era homolog"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0288609 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 EMBL:AAFI02000118 RefSeq:XP_636640.1
ProteinModelPortal:Q54IP6 STRING:Q54IP6 EnsemblProtists:DDB0219361
GeneID:8626714 KEGG:ddi:DDB_G0288609 InParanoid:Q54IP6 OMA:DAVKRPT
Uniprot:Q54IP6
Length = 398
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 52/221 (23%), Positives = 93/221 (42%)
Query: 318 EALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNAL 377
E +P ++R N + + + +P +E+ L +AI+G PN GKSTL+N++
Sbjct: 75 ERAQPIKRKRVVRSYNITPPDITEQSMQLETPIHNENAKTLNVAIIGAPNAGKSTLVNSI 134
Query: 378 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLM 437
+ E V P TRD+V + + DT G ++ V + +
Sbjct: 135 VGEKICAVSPTEHTTRDAVLGIYSKDDTQILFHDTPGIIKNFNRMAHVREFVNLAWGVVK 194
Query: 438 RAHVVALVLDAEEVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVK-EAVPQEIQTVIPQ 496
A +V LV+DA + + IV K++ Q L KR++ E +
Sbjct: 195 EADIVLLVVDATNNNSSDTE----FIVGKLE----EQMLNLIKRMRMEQTNAKANAATAS 246
Query: 497 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLN 537
+ + +L+ + I V+++V +K L S+LN
Sbjct: 247 NEELGAIVNDSLDEKEFILVVNKVDLVKKKETLVQMISQLN 287
>UNIPROTKB|Q8EAH6 [details] [associations]
symbol:hydF "Fe hydrogenase maturation GTPase HydF"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P25522
HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 47/168 (27%), Positives = 83/168 (49%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYN---TPDDHVTRDIREGLAKLGDLRFKVLDSAG 212
+ ++GR N GKS+L N L ++ ++V + T D V + L LG + F D+AG
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYE--LQPLGPVTF--YDTAG 60
Query: 213 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 272
++ E T G++ R + T VL ++ A+ ++D GL P D+ + +R+ Q+ ++
Sbjct: 61 IDDEGTLGAM--RVSA-TRRVLFRSDMALLVVD-EQGLCPSDMALIDEIRQL--QMPILM 114
Query: 273 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 320
NK + +A +SL I +SA TGL +L + +
Sbjct: 115 VFNKADICTPKAEDIAFCQNQSLPF-----IVVSAATGLAGKQLKQLM 157
>TIGR_CMR|SO_3926 [details] [associations]
symbol:SO_3926 "GTP-binding protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P25522 HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 47/168 (27%), Positives = 83/168 (49%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYN---TPDDHVTRDIREGLAKLGDLRFKVLDSAG 212
+ ++GR N GKS+L N L ++ ++V + T D V + L LG + F D+AG
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYE--LQPLGPVTF--YDTAG 60
Query: 213 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 272
++ E T G++ R + T VL ++ A+ ++D GL P D+ + +R+ Q+ ++
Sbjct: 61 IDDEGTLGAM--RVSA-TRRVLFRSDMALLVVD-EQGLCPSDMALIDEIRQL--QMPILM 114
Query: 273 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 320
NK + +A +SL I +SA TGL +L + +
Sbjct: 115 VFNKADICTPKAEDIAFCQNQSLPF-----IVVSAATGLAGKQLKQLM 157
>DICTYBASE|DDB_G0268824 [details] [associations]
symbol:DDB_G0268824 species:44689 "Dictyostelium
discoideum" [GO:0005525 "GTP binding" evidence=IEA] [GO:0000917
"barrier septum assembly" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00321 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR019987 Pfam:PF01926
dictyBase:DDB_G0268824 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AAFI02000004 GO:GO:0000917 eggNOG:COG0218 KO:K03978
TIGRFAMs:TIGR03598 RefSeq:XP_646993.1 ProteinModelPortal:Q55EM7
STRING:Q55EM7 EnsemblProtists:DDB0190064 GeneID:8616686
KEGG:ddi:DDB_G0268824 InParanoid:Q55EM7 OMA:IHKNDIE Uniprot:Q55EM7
Length = 432
Score = 120 (47.3 bits), Expect = 0.00053, P = 0.00053
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 343 TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY 402
T + S + + P Q+A +G+ NVGKSTLLN++L+ D V AG T+ ++F
Sbjct: 218 TMAIKSVDFPKKHFP-QVAFLGKSNVGKSTLLNSVLRRDLAYVSKSAGCTKT---INFYQ 273
Query: 403 QGRTVYLVDTAGW--LQREKEK----GPASLSVMQSRKNLMRAHVVALVL------DAEE 450
+YLVD G+ + K+K G A + + NL + ++ D E
Sbjct: 274 IWEKLYLVDLPGYGFAKVSKKKSTVWGNAISEFLLTSPNLFKVFLLIDSRNKIHKNDIEA 333
Query: 451 VRAVEEGR-GLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALE 509
+ +++ + +++ K+D + +LY +KE + Q+ +P + + TS+++
Sbjct: 334 MSLLDQHKVSFQIVLTKIDKTTPSMLRSLYGSLKEEI-QKTTCCLPTI-----IQTSSVD 387
Query: 510 GRG 512
+G
Sbjct: 388 SKG 390
>TIGR_CMR|APH_1288 [details] [associations]
symbol:APH_1288 "tRNA modification GTPase TrmE"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ RefSeq:YP_505803.1 ProteinModelPortal:Q2GIJ8
STRING:Q2GIJ8 GeneID:3930863 KEGG:aph:APH_1288 PATRIC:20951370
ProtClustDB:PRK05291 BioCyc:APHA212042:GHPM-1290-MONOMER
Uniprot:Q2GIJ8
Length = 445
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 37/106 (34%), Positives = 56/106 (52%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 215
V+I+G PN GKS LFN + RR A+V P TRD+ E +G + VLD+AG+
Sbjct: 220 VVILGPPNAGKSTLFNSIARRNAAIVSEHPG--TTRDVLEVAIDIGGYPYIVLDTAGIR- 276
Query: 216 EATSGSILD--RTAGMTANVLAKTQFAIFMIDVRS--GLHPL-DLE 256
E+ G + + A M A A + ++ + S G+ P+ DL+
Sbjct: 277 ESCDGIEQEGIKRAKMAAEE-ADIKIVMYPYETTSMQGIDPICDLQ 321
>TIGR_CMR|CBU_1502 [details] [associations]
symbol:CBU_1502 "GTP-binding protein Era" species:227377
"Coxiella burnetii RSA 493" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016049 "cell growth" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0019843 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 eggNOG:COG1159
HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 EMBL:L27436 PIR:S60768 RefSeq:NP_820485.1
ProteinModelPortal:P51836 SMR:P51836 GeneID:1209412
KEGG:cbu:CBU_1502 PATRIC:17931769 OMA:KVAKDWQ
BioCyc:CBUR227377:GJ7S-1487-MONOMER Uniprot:P51836
Length = 295
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 46/167 (27%), Positives = 77/167 (46%)
Query: 158 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE--T 215
IIGRPNVGKS L N+L+ ++ ++ P TR G+ D++ +D+ GL T
Sbjct: 11 IIGRPNVGKSTLLNQLLEQKISITSRKPQ--TTRYQILGVKTFKDIQVIYVDTPGLHAGT 68
Query: 216 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK-PI-VA 273
E T ++RTA L +F+I+ P W+ + +I+ P+ +
Sbjct: 69 ERTINRYMNRTA---RGALRDVDAIVFVIE------PHWESQDAWVLDNLKEIETPVFLV 119
Query: 274 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 320
+NK + + N L S + F +SA+TG + L +A+
Sbjct: 120 INKVDKIKNRAELLPLIEKVSSLYAFQKITPLSAKTGDQVGTLEQAV 166
>TIGR_CMR|CHY_0430 [details] [associations]
symbol:CHY_0430 "GTP-binding protein Era" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
OMA:ITREQLF SUPFAM:SSF54814 eggNOG:COG1159 HOGENOM:HOG000245596
KO:K03595 TIGRFAMs:TIGR00436 RefSeq:YP_359291.1
ProteinModelPortal:Q3AEZ3 STRING:Q3AEZ3 GeneID:3728261
KEGG:chy:CHY_0430 PATRIC:21274021
BioCyc:CHYD246194:GJCN-431-MONOMER Uniprot:Q3AEZ3
Length = 298
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 156 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGL-AKLGDLRFKVLDSAGL 213
V I+GRPNVGKS L N+++ + A++ + P TR+ IR L ++ G + F +D+ G+
Sbjct: 8 VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQ--TTRNKIRAVLTSEKGQIIF--IDTPGV 63
Query: 214 ETEATS-GSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK-PI 271
+ G + + A +T+ L + +++++ S + P + +L K ++K PI
Sbjct: 64 QKPRNKLGEFMLKQA-LTS--LDEVDVLLYVVEANSPIGPQE----NYLLKTLAEVKTPI 116
Query: 272 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 320
+ +NK + + ES L ISA G G++EL E +
Sbjct: 117 ILVVNKIDVVKMIEAQTLARQIES-RLKVAKTYYISALNGTGVSELVEGI 165
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 640 627 0.00091 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 617 (66 KB)
Total size of DFA: 321 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.53u 0.13s 53.66t Elapsed: 00:00:02
Total cpu time: 53.55u 0.13s 53.68t Elapsed: 00:00:02
Start: Thu May 9 13:47:59 2013 End: Thu May 9 13:48:01 2013