Your job contains 1 sequence.
>006556
MVIDGAGGKGTWGKLLDTDVESHIDRNDPNYDSGEEPYQLVGATISDPLDDYKKAVASII
EEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVIS
PDQIRDGFVILLESADDLAVDILDAVDILALFVARAVVDDILPPAFLTRAKKTLPAASKG
FQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCI
RELGVSFFHHEVVKRALVLAMEIRTAEPLILKLLKEAAEEGLISSSQMAKGFARLEESLD
DLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHE
YFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLSALHIEIFSTE
DIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEISSKLPPNCSGSE
TVRVARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDL
GMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALD
IPNAKEKFTFYVEYARKKGWLLPAFGSCVADASPLPAVAT
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006556
(640 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126788 - symbol:ECIP1 "AT4G24800" species:370... 2472 8.2e-257 1
TAIR|locus:2162007 - symbol:AT5G63190 "AT5G63190" species... 2414 1.2e-250 1
TAIR|locus:2101155 - symbol:AT3G48390 "AT3G48390" species... 2193 3.0e-227 1
TAIR|locus:2199695 - symbol:AT1G22730 "AT1G22730" species... 1429 2.8e-146 1
UNIPROTKB|F1S5L7 - symbol:PDCD4 "Uncharacterized protein"... 358 6.5e-34 2
ZFIN|ZDB-GENE-030131-9847 - symbol:pdcd4b "programmed cel... 363 8.7e-33 1
UNIPROTKB|Q98TX3 - symbol:PDCD4 "Programmed cell death pr... 357 4.1e-32 1
UNIPROTKB|F1NIY3 - symbol:PDCD4 "Programmed cell death pr... 356 5.2e-32 1
UNIPROTKB|E2R334 - symbol:PDCD4 "Uncharacterized protein"... 353 1.1e-31 1
FB|FBgn0030520 - symbol:Pdcd4 "Programmed cell death 4 or... 363 1.4e-31 1
UNIPROTKB|A4IFD1 - symbol:PDCD4 "Uncharacterized protein"... 352 1.4e-31 1
MGI|MGI:107490 - symbol:Pdcd4 "programmed cell death 4" s... 351 1.9e-31 1
RGD|620816 - symbol:Pdcd4 "programmed cell death 4" speci... 351 1.9e-31 1
UNIPROTKB|Q53EL6 - symbol:PDCD4 "Programmed cell death pr... 350 2.4e-31 1
ZFIN|ZDB-GENE-040426-1920 - symbol:pdcd4a "programmed cel... 320 1.6e-26 1
UNIPROTKB|Q5VZS7 - symbol:PDCD4 "Programmed cell death pr... 186 1.5e-13 1
UNIPROTKB|J9NX01 - symbol:PDCD4 "Uncharacterized protein"... 188 2.6e-12 1
GENEDB_PFALCIPARUM|PF14_0546 - symbol:PF14_0546 "hypothet... 164 7.6e-12 3
UNIPROTKB|Q8IKQ7 - symbol:PF14_0546 "Putative uncharacter... 164 7.6e-12 3
UNIPROTKB|E9PKF8 - symbol:EIF4G2 "Eukaryotic translation ... 165 2.8e-11 1
RGD|1305294 - symbol:Eif4g2 "eukaryotic translation initi... 151 9.7e-07 2
TAIR|locus:2174353 - symbol:eIFiso4G1 "AT5G57870" species... 144 2.0e-06 2
TAIR|locus:2131919 - symbol:AT4G30680 "AT4G30680" species... 136 2.8e-06 1
UNIPROTKB|H0Y3P2 - symbol:EIF4G2 "Eukaryotic translation ... 154 4.1e-06 3
UNIPROTKB|F2Z4C6 - symbol:EIF4G2 "Eukaryotic translation ... 154 4.9e-06 3
UNIPROTKB|Q95L46 - symbol:EIF4G2 "Eukaryotic translation ... 154 4.9e-06 3
UNIPROTKB|D3DQV9 - symbol:EIF4G2 "Eukaryotic translation ... 154 4.9e-06 3
UNIPROTKB|P78344 - symbol:EIF4G2 "Eukaryotic translation ... 154 4.9e-06 3
UNIPROTKB|P79398 - symbol:EIF4G2 "Eukaryotic translation ... 154 4.9e-06 3
UNIPROTKB|Q5R7J9 - symbol:EIF4G2 "Eukaryotic translation ... 154 4.9e-06 3
UNIPROTKB|F1S6V4 - symbol:EIF4G2 "Uncharacterized protein... 154 5.4e-06 3
UNIPROTKB|F1PAH7 - symbol:EIF4G2 "Uncharacterized protein... 153 6.9e-06 3
UNIPROTKB|F1LRX1 - symbol:Eif4g2 "Protein Eif4g2" species... 151 8.6e-06 3
UNIPROTKB|F1LN59 - symbol:Eif4g2 "Protein Eif4g2" species... 151 1.0e-05 3
UNIPROTKB|F1M6T9 - symbol:Eif4g2 "Protein Eif4g2" species... 151 1.0e-05 3
TAIR|locus:2061370 - symbol:eIFiso4G2 "AT2G24050" species... 137 1.6e-05 1
MGI|MGI:109207 - symbol:Eif4g2 "eukaryotic translation in... 148 2.1e-05 3
UNIPROTKB|F1NQU7 - symbol:EIF4G2 "Eukaryotic translation ... 145 3.5e-05 2
UNIPROTKB|F1P4A7 - symbol:EIF4G2 "Eukaryotic translation ... 145 3.9e-05 2
ZFIN|ZDB-GENE-030131-6550 - symbol:eif4g2b "eukaryotic tr... 128 0.00019 1
ZFIN|ZDB-GENE-030131-2173 - symbol:eif4g2a "eukaryotic tr... 136 0.00034 2
UNIPROTKB|E1BSG5 - symbol:Gga.53666 "Uncharacterized prot... 126 0.00054 1
UNIPROTKB|Q1MSJ2 - symbol:eif(iso)4g "Putative eukaryotic... 123 0.00056 1
UNIPROTKB|Q1MSJ0 - symbol:eif(iso)4g "Putative eukaryotic... 123 0.00056 1
UNIPROTKB|Q1MSJ1 - symbol:eif(iso)4g "Putative eukaryotic... 123 0.00056 1
UNIPROTKB|Q1MSJ3 - symbol:eif(iso)4g "Putative eukaryotic... 123 0.00056 1
UNIPROTKB|Q1MSJ4 - symbol:eif(iso)4g "Putative eukaryotic... 123 0.00056 1
>TAIR|locus:2126788 [details] [associations]
symbol:ECIP1 "AT4G24800" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009723
"response to ethylene stimulus" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR016021 InterPro:IPR016024
GO:GO:0005829 GO:GO:0005794 EMBL:CP002687 SUPFAM:SSF48371
GO:GO:0009723 GO:GO:0009651 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
ProtClustDB:CLSN2681851 EMBL:AY062102 EMBL:AY124878 IPI:IPI00533865
RefSeq:NP_001031708.1 RefSeq:NP_001190828.1 RefSeq:NP_567708.1
UniGene:At.21456 ProteinModelPortal:Q8W4Q4 SMR:Q8W4Q4 PRIDE:Q8W4Q4
EnsemblPlants:AT4G24800.1 EnsemblPlants:AT4G24800.2
EnsemblPlants:AT4G24800.3 GeneID:828582 KEGG:ath:AT4G24800
TAIR:At4g24800 InParanoid:Q8W4Q4 OMA:CKCIHEL PhylomeDB:Q8W4Q4
Genevestigator:Q8W4Q4 Uniprot:Q8W4Q4
Length = 702
Score = 2472 (875.2 bits), Expect = 8.2e-257, P = 8.2e-257
Identities = 487/632 (77%), Positives = 535/632 (84%)
Query: 4 DGAGGKGTWGKLLDTDVESHIDRNDPNYDSGEEPYQLVGATISDPLDDYKKAVASIIEEY 63
DG GGKG WGKL+DTD + HID NDPNYDSGEEP++LVGAT+SDPLDDYKKA ASII EY
Sbjct: 69 DGGGGKGNWGKLIDTDGDYHIDPNDPNYDSGEEPFELVGATLSDPLDDYKKAAASIINEY 128
Query: 64 FSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQ 123
FSTGDV+VAA+DL ELGSSEYHPYFIKRLVS+AMDRHDKEKEMASVLLSALYADVI+P+Q
Sbjct: 129 FSTGDVDVAAADLIELGSSEYHPYFIKRLVSVAMDRHDKEKEMASVLLSALYADVINPNQ 188
Query: 124 IRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGFQV 183
IRDGFV+LLES F+ARAVVDDILPPAFL RA K LP SKG+QV
Sbjct: 189 IRDGFVLLLESADDFVVDIPDAVNVLALFLARAVVDDILPPAFLPRAAKALPITSKGYQV 248
Query: 184 IQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIREL 243
+QTAEKSYLSA HHAELVERRWGG T TVEEVKKKIAD+L EYVE+G+ +EACRC+REL
Sbjct: 249 VQTAEKSYLSAAHHAELVERRWGGQTRTTVEEVKKKIADILNEYVETGETYEACRCVREL 308
Query: 244 GVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSSSQMAKGFARLEESLDDLA 303
GVSFFHHEVVKRALV A+E AE SSSQM KGF+RL ESLDDLA
Sbjct: 309 GVSFFHHEVVKRALVTALENHAAEAPVLKLLNEAASENLISSSQMVKGFSRLRESLDDLA 368
Query: 304 LDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHEYFL 363
LDIPSAR F IVP A+S GWLDASF GE GR Q EDEK+KR+KE++VTIIHEYF
Sbjct: 369 LDIPSARTKFGLIVPKAVSGGWLDASFGYPSGECGRQQNEDEKLKRFKEDIVTIIHEYFN 428
Query: 364 SDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLSALHIEIFSTEDIV 423
SDDIPELIRSLEDLGAPE+NPIFLKK+ITLA+DRKN EKEMASVLLS+LHIE+F+TED+
Sbjct: 429 SDDIPELIRSLEDLGAPEYNPIFLKKLITLALDRKNHEKEMASVLLSSLHIEMFTTEDVA 488
Query: 424 NGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEISSKLPPNCSGSETVR 483
+GFVMLLESAEDTALDILDASNELALFLARAVIDDVLAP NLEEISSKL PN SG+ETV+
Sbjct: 489 DGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPFNLEEISSKLRPNSSGTETVK 548
Query: 484 VARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMP 543
+ARSLI ARHAGERLLRCWGGG+GWAVEDAKDKI LLEEYES G+VSEAC+CI +LGMP
Sbjct: 549 MARSLIFARHAGERLLRCWGGGSGWAVEDAKDKISNLLEEYESSGLVSEACKCIHELGMP 608
Query: 544 FFNHEVVKKALVMAMEKKNDRM-LDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIP 602
FFNHEVVKKALVM MEKK D+M LDLLQE FSEGLITTNQMTKGFTR+KDGL+DLALDIP
Sbjct: 609 FFNHEVVKKALVMGMEKKKDKMMLDLLQESFSEGLITTNQMTKGFTRVKDGLEDLALDIP 668
Query: 603 NAKEKFTFYVEYARKKGWLLPAF-GSCVADAS 633
NAKEKF YVEY +K GW+ +F S DA+
Sbjct: 669 NAKEKFNDYVEYGKKNGWVSSSFLTSLTEDAN 700
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 123/310 (39%), Positives = 181/310 (58%)
Query: 31 YDSGEEPYQLVGATISDPLDDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIK 90
Y SGE Q + L +K+ + +II EYF++ D+ L +LG+ EY+P F+K
Sbjct: 397 YPSGECGRQ---QNEDEKLKRFKEDIVTIIHEYFNSDDIPELIRSLEDLGAPEYNPIFLK 453
Query: 91 RLVSMAMDRHDKEKEMASVLLSALYADVISPDQIRDGFVILLESXXXXXXXXXXXXXXXX 150
+L+++A+DR + EKEMASVLLS+L+ ++ + + + DGFV+LLES
Sbjct: 454 KLITLALDRKNHEKEMASVLLSSLHIEMFTTEDVADGFVMLLESAEDTALDILDASNELA 513
Query: 151 XFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTH 210
F+ARAV+DD+L P L L S G + ++ A +S + A H E + R WGG +
Sbjct: 514 LFLARAVIDDVLAPFNLEEISSKLRPNSSGTETVKMA-RSLIFARHAGERLLRCWGGGSG 572
Query: 211 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPXX 270
VE+ K KI++LL EY SG EAC+CI ELG+ FF+HEVVK+ALV+ ME + +
Sbjct: 573 WAVEDAKDKISNLLEEYESSGLVSEACKCIHELGMPFFNHEVVKKALVMGME-KKKDKMM 631
Query: 271 XXXXXXXXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASF 330
+++QM KGF R+++ L+DLALDIP+A+ F V GW+ +SF
Sbjct: 632 LDLLQESFSEGLITTNQMTKGFTRVKDGLEDLALDIPNAKEKFNDYVEYGKKNGWVSSSF 691
Query: 331 MKSLGEDGRV 340
+ SL ED V
Sbjct: 692 LTSLTEDANV 701
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 38/144 (26%), Positives = 63/144 (43%)
Query: 494 AGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKA 553
+GE G ++D K ++ EY S G V A + +LG ++ +K+
Sbjct: 98 SGEEPFELVGATLSDPLDDYKKAAASIINEYFSTGDVDVAAADLIELGSSEYHPYFIKRL 157
Query: 554 LVMAMEK--KNDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFY 611
+ +AM++ K M +L +I NQ+ GF + + DD +DIP+A +
Sbjct: 158 VSVAMDRHDKEKEMASVLLSALYADVINPNQIRDGFVLLLESADDFVVDIPDAVNVLALF 217
Query: 612 VEYARKKGWLLPAFGSCVADASPL 635
+ A L PAF A A P+
Sbjct: 218 LARAVVDDILPPAFLPRAAKALPI 241
>TAIR|locus:2162007 [details] [associations]
symbol:AT5G63190 "AT5G63190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009734 "auxin mediated signaling pathway"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR016021 InterPro:IPR016024 EMBL:CP002688
SUPFAM:SSF48371 GO:GO:0016853 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
ProtClustDB:CLSN2681851 EMBL:AY039947 EMBL:AY142667 IPI:IPI00548777
RefSeq:NP_568968.1 RefSeq:NP_851255.1 UniGene:At.23418
ProteinModelPortal:Q94BR1 SMR:Q94BR1 IntAct:Q94BR1 STRING:Q94BR1
PRIDE:Q94BR1 EnsemblPlants:AT5G63190.1 EnsemblPlants:AT5G63190.2
GeneID:836440 KEGG:ath:AT5G63190 TAIR:At5g63190 InParanoid:Q94BR1
OMA:CNCIREL PhylomeDB:Q94BR1 ArrayExpress:Q94BR1
Genevestigator:Q94BR1 Uniprot:Q94BR1
Length = 702
Score = 2414 (854.8 bits), Expect = 1.2e-250, P = 1.2e-250
Identities = 468/625 (74%), Positives = 528/625 (84%)
Query: 4 DGAGGKGTWGKLLDTDV-ESHIDRNDPNYDSGEEPYQ-LVGATISDPLDDYKKAVASIIE 61
+GAGGKGTWGKLLDTD +S ID+NDPNYDSGE+ Y LV + +SDPL+DYKK+V SII+
Sbjct: 73 EGAGGKGTWGKLLDTDDGDSCIDKNDPNYDSGEDAYDGLVDSPVSDPLNDYKKSVVSIID 132
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYFSTGDV+VAASDLRELGSSEYHPYF KRLVSMAMDRHDKEKEMASVLLSALYADVI P
Sbjct: 133 EYFSTGDVKVAASDLRELGSSEYHPYFTKRLVSMAMDRHDKEKEMASVLLSALYADVILP 192
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
DQIRDGF+ LL S F+ARA+VD+ILPP FL R+KK LP + KGF
Sbjct: 193 DQIRDGFIRLLRSVDDLAVDILDAVNVLALFIARAIVDEILPPVFLVRSKKILPESCKGF 252
Query: 182 QVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIR 241
QVI TAEKSYLSAPHHAELVE++WGGSTH TVEE KKKI+++L+EYVE+GD +EACRCIR
Sbjct: 253 QVIVTAEKSYLSAPHHAELVEKKWGGSTHTTVEETKKKISEILKEYVENGDTYEACRCIR 312
Query: 242 ELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSSSQMAKGFARLEESLDD 301
ELGVSFFHHEVVKRALVLAM+ TAE SSSQM KGF R+ ESLDD
Sbjct: 313 ELGVSFFHHEVVKRALVLAMDSPTAESLVLKLLKETAEEGLISSSQMVKGFFRVAESLDD 372
Query: 302 LALDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHEY 361
LALDIPSA+ LF SIVP AIS GWLD SF + +DG +D K+++YK++ V II EY
Sbjct: 373 LALDIPSAKKLFDSIVPKAISGGWLDDSFKITSDQDGEKSSQDGKLRQYKKDTVNIIQEY 432
Query: 362 FLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLLSALHIEIFSTED 421
FLSDDIPELIRSL+DLGAPE+NP+FLK++ITLA+DRKNREKEMASVLLSALH+E+FSTED
Sbjct: 433 FLSDDIPELIRSLQDLGAPEYNPVFLKRLITLALDRKNREKEMASVLLSALHMELFSTED 492
Query: 422 IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEISSKLPPNCSGSET 481
+NGF+MLLESAEDTALDI+DASNELALFLARAVIDDVLAPLNLE+IS+KLPP +G+ET
Sbjct: 493 FINGFIMLLESAEDTALDIMDASNELALFLARAVIDDVLAPLNLEDISTKLPPKSTGTET 552
Query: 482 VRVARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLG 541
VR ARSLI+ARHAGERLLR WGGGTGW VEDAKDKI KLLEEYE+GGV SEACQCIRDLG
Sbjct: 553 VRSARSLISARHAGERLLRSWGGGTGWIVEDAKDKISKLLEEYETGGVTSEACQCIRDLG 612
Query: 542 MPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDI 601
MPFFNHEVVKKALVMAMEK+NDR+L+LL+ECF EGLITTNQMTKGF R+ D LDDL+LDI
Sbjct: 613 MPFFNHEVVKKALVMAMEKQNDRLLNLLEECFGEGLITTNQMTKGFGRVNDSLDDLSLDI 672
Query: 602 PNAKEKFTFYVEYARKKGWLLPAFG 626
PNAKEKF Y +A GW+LP FG
Sbjct: 673 PNAKEKFELYASHAMDNGWILPEFG 697
>TAIR|locus:2101155 [details] [associations]
symbol:AT3G48390 "AT3G48390" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR016021 InterPro:IPR016024 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0016070
EMBL:AL049659 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 HOGENOM:HOG000239865
ProtClustDB:CLSN2681851 EMBL:AY074567 EMBL:BT002208 IPI:IPI00535103
PIR:T06703 RefSeq:NP_190411.1 UniGene:At.35725
ProteinModelPortal:Q9STL9 SMR:Q9STL9 PRIDE:Q9STL9 DNASU:823997
EnsemblPlants:AT3G48390.1 GeneID:823997 KEGG:ath:AT3G48390
TAIR:At3g48390 eggNOG:NOG267708 InParanoid:Q9STL9 OMA:HITVEET
PhylomeDB:Q9STL9 Genevestigator:Q9STL9 Uniprot:Q9STL9
Length = 633
Score = 2193 (777.0 bits), Expect = 3.0e-227, P = 3.0e-227
Identities = 432/609 (70%), Positives = 498/609 (81%)
Query: 25 DRNDPNYDSGEEPYQLVGATISDPLDDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEY 84
D D D+GEEPY LVG+ + +PL+DYK+ V SII+EYFS+GDVEVAASDL +LG SEY
Sbjct: 30 DDKDHTCDTGEEPYALVGSPVFNPLEDYKREVVSIIDEYFSSGDVEVAASDLMDLGLSEY 89
Query: 85 HPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQIRDGFVILLESXXXXXXXXXX 144
HPYF+KRLVSMAMDR +KEKE ASVLLS LYA V+SPDQIR GF+ LLES
Sbjct: 90 HPYFVKRLVSMAMDRGNKEKEKASVLLSRLYALVVSPDQIRVGFIRLLESVGDLALDIPD 149
Query: 145 XXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERR 204
F+ARA+VD+ILPP FL RAKKTLP +S+GFQVI +E SYLSAPHHAELVE +
Sbjct: 150 AVNVLALFIARAIVDEILPPVFLARAKKTLPHSSQGFQVILVSENSYLSAPHHAELVETK 209
Query: 205 WGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIR 264
WGGSTHITVEE K+KI++ L EYVE+GD EACRCIRELGVSFFHHE+VK LVL ME R
Sbjct: 210 WGGSTHITVEETKRKISEFLNEYVENGDTREACRCIRELGVSFFHHEIVKSGLVLVMESR 269
Query: 265 TAEPXXXXXXXXXXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEG 324
T+EP SSSQMAKGF+R+ +SLDDL+LDIPSA+ LF+SIVP AI G
Sbjct: 270 TSEPLILKLLKEATEEGLISSSQMAKGFSRVADSLDDLSLDIPSAKTLFESIVPKAIIGG 329
Query: 325 WLDA-SFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFN 383
WLD SF + ++G E ++R+K++ TII EYFLSDDIPELIRSLEDLG PE+N
Sbjct: 330 WLDEDSFKERSDQNGG----SENLRRFKKDAETIIQEYFLSDDIPELIRSLEDLGLPEYN 385
Query: 384 PIFLKKVITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDA 443
P+FLKK+ITLAMDRKN+EKEMASV L++LH+E+FSTED +NGF+MLLESAEDTALDIL A
Sbjct: 386 PVFLKKLITLAMDRKNKEKEMASVFLASLHMEMFSTEDFINGFIMLLESAEDTALDILAA 445
Query: 444 SNELALFLARAVIDDVLAPLNLEEISSKLPPNCSGSETVRVARSLIAARHAGERLLRCWG 503
S+ELALFLARAVIDDVLAPLNLEEIS+ LPP +GSET+R ARSLI+ARHAGERLLR WG
Sbjct: 446 SDELALFLARAVIDDVLAPLNLEEISNSLPPKSTGSETIRSARSLISARHAGERLLRSWG 505
Query: 504 GGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKND 563
GGTGWAVEDAKDKI KLLEEYE GGV+SEAC+CIRDLGMPFFNHEVVKKALVMAMEKKND
Sbjct: 506 GGTGWAVEDAKDKIWKLLEEYEVGGVISEACRCIRDLGMPFFNHEVVKKALVMAMEKKND 565
Query: 564 RMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKGWLLP 623
RML+LLQECF+EG+ITTNQMTKGF R+KD LDDL+LDIPNA+EKF YV +A + GWL
Sbjct: 566 RMLNLLQECFAEGIITTNQMTKGFGRVKDSLDDLSLDIPNAEEKFNSYVAHAEENGWLHR 625
Query: 624 AFGSCVADA 632
FG C D+
Sbjct: 626 DFG-CSTDS 633
>TAIR|locus:2199695 [details] [associations]
symbol:AT1G22730 "AT1G22730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016021 InterPro:IPR016024 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 GO:GO:0016853
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 EMBL:AC003979 EMBL:AY034972
EMBL:AY133820 IPI:IPI00518794 PIR:T00771 RefSeq:NP_173687.1
UniGene:At.17031 ProteinModelPortal:O80548 SMR:O80548 PRIDE:O80548
EnsemblPlants:AT1G22730.1 GeneID:838879 KEGG:ath:AT1G22730
TAIR:At1g22730 HOGENOM:HOG000239865 InParanoid:O80548 OMA:EACRCIK
PhylomeDB:O80548 ProtClustDB:CLSN2681851 ArrayExpress:O80548
Genevestigator:O80548 Uniprot:O80548
Length = 693
Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
Identities = 309/636 (48%), Positives = 419/636 (65%)
Query: 7 GGKGTWGKLLDTDVESHIDRNDPNYDSGEEPYQLVGATISDP-LDDYKKAVASIIEEYFS 65
G + TWG VE D DP +D+ E + D L +YKK I+EEYF
Sbjct: 51 GSEETWG------VEDDDDLTDPIFDTIEGNGHSDPTSCFDADLSEYKKKATVIVEEYFG 104
Query: 66 TGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPDQIR 125
T DV ++L+ELG +EY YF+K+LVSMAMDRHDKEKEMA+ LLS LYADVI P ++
Sbjct: 105 TNDVVSVVNELKELGMAEYRYYFVKKLVSMAMDRHDKEKEMAAFLLSTLYADVIDPPEVY 164
Query: 126 DGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGFQVIQ 185
GF L+ S FVARA+VDDILPPAFL + K LP SKG +V++
Sbjct: 165 RGFNKLVASADDLSVDIPDAVDVLAVFVARAIVDDILPPAFLKKQMKLLPDNSKGVEVLR 224
Query: 186 TAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGV 245
AEKSYL+ P HAE+VE+RWGG+ + T E+VK +I DLL+EYV SGD EA RCI+ L V
Sbjct: 225 KAEKSYLATPLHAEVVEKRWGGTDNWTAEDVKARINDLLKEYVMSGDKKEAFRCIKGLKV 284
Query: 246 SFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSSSQMAKGFARLEESLDDLALD 305
FFHHE+VKRAL++AME R A+ +S+Q+ KGF+R+ +S++DL+LD
Sbjct: 285 PFFHHEIVKRALIMAMERRKAQVRLLDLLKETIEVGLINSTQVTKGFSRIIDSIEDLSLD 344
Query: 306 IPSARNLFQSIVPVAISEGWLDASFMKSLGED-GRVQQEDEKVKRYKEEVVTIIHEYFLS 364
IP AR + QS + A SEGWL AS +KSL D G E+ +K++ +II EYFLS
Sbjct: 345 IPDARRILQSFISKAASEGWLCASSLKSLSADAGEKLLENSSANVFKDKAKSIIREYFLS 404
Query: 365 DDIPELIRSLE-DLGAP--EFNPIFLKKVITLAMDRKNREKEMASVLLSALHIEIFSTED 421
D E++ L+ +L A + IF+K +ITLAMDRK REKEMA VL+S L F +D
Sbjct: 405 GDTSEVVHCLDTELNASSSQLRAIFVKYLITLAMDRKKREKEMACVLVSTLG---FPPKD 461
Query: 422 IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEISSKLPPNCS--GS 479
+ + F ML+ESA+DTALD +LA+FLARAV+D+VLAP +LEE+ ++ P S G
Sbjct: 462 VRSAFSMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPRDLEEVLNQTPEAGSSVGE 521
Query: 480 ETVRVARSLIAARHAGERLLRCWGGG------TGWAVEDAKDKIMKLLEEYESGGVVSEA 533
+ +++A++L+ AR +GER+LRCWGGG G V++ K+KI LLEEY SGG + EA
Sbjct: 522 KVIQMAKTLLKARLSGERILRCWGGGGIETNSPGSTVKEVKEKIQILLEEYVSGGDLREA 581
Query: 534 CQCIRDLGMPFFNHEVVKKALVMAMEKKN--DRMLDLLQECFSEGLITTNQMTKGFTRIK 591
+C+++LGMPFF+HEVVKK++V +E+K +R+ LL+ CF GL+T QMTKGF R+
Sbjct: 582 SRCVKELGMPFFHHEVVKKSVVRIIEEKENEERLWKLLKVCFDSGLVTIYQMTKGFKRVD 641
Query: 592 DGLDDLALDIPNAKEKFTFYVEYARKKGWLLPAFGS 627
+ L+DL+LD+P+A +KF+ VE + +G+L +F S
Sbjct: 642 ESLEDLSLDVPDAAKKFSSCVERGKLEGFLDESFAS 677
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 347 VKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMAS 406
VK KE++ ++ EY D+ E R +++LG P F+ +KK + ++ K E+ +
Sbjct: 558 VKEVKEKIQILLEEYVSGGDLREASRCVKELGMPFFHHEVVKKSVVRIIEEKENEERLWK 617
Query: 407 VLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLE 466
+L + + + GF + ES ED +LD+ DA+ + + + R ++ L
Sbjct: 618 LLKVCFDSGLVTIYQMTKGFKRVDESLEDLSLDVPDAAKKFSSCVERGKLEGFLDESFAS 677
Query: 467 EISSKLPPNCSGSET 481
E S N S S +
Sbjct: 678 EDSQSKKQNGSSSSS 692
>UNIPROTKB|F1S5L7 [details] [associations]
symbol:PDCD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007569 "cell aging" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] InterPro:IPR016021 InterPro:IPR016024 GO:GO:0005829
SUPFAM:SSF48371 GO:GO:0016070 GO:GO:0007569 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
OMA:LSMSKGG GeneTree:ENSGT00390000015948 EMBL:CT737336
Ensembl:ENSSSCT00000011623 Uniprot:F1S5L7
Length = 470
Score = 358 (131.1 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 103/327 (31%), Positives = 149/327 (45%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 117 GAGGKGVWGTPGQVYDVEE-VDVKDPNYDDDQE--NCVYETVVLPLDEMAFEKTLTPIIQ 173
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 174 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 233
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
+ + F LL+ F+ARAV D IL ++ K T+
Sbjct: 234 NDVEKSFDKLLKELPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCVQASR 293
Query: 182 QVIQTAEKSYLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCI 240
+ A LS + WG G +V + K+I LL+EY+ SGD EA C+
Sbjct: 294 AALDKATV-LLSMSKGGRRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGDISEAEHCL 352
Query: 241 RELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSS---SQMAKGFARLEE 297
+EL V FHHE+V A+++ +E T E S+ QM +G+ R+
Sbjct: 353 KELEVPHFHHELVYEAIIMVLE-STGESTFKMILDLLKSLWKSSTITLDQMKRGYERIYN 411
Query: 298 SLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 412 EIPDINLDVPHSYSMLERFVEECFQAG 438
Score = 322 (118.4 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 84/275 (30%), Positives = 137/275 (49%)
Query: 350 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 409
+++ + II EYF D E+ L DL E ++LA++ K +EM S LL
Sbjct: 164 FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 223
Query: 410 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 469
S L + ST D+ F LL+ + ALD A + F+ARAV D +L ++
Sbjct: 224 SDLCGTVMSTNDVEKSFDKLLKELPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYK 283
Query: 470 SKLPPNCSGSETVRVARSLIAARHAGERLLRCWGGGTGW-AVEDAKDKIMKLLEEYESGG 528
+ + + A L++ G R WG G G +V +I LL+EY G
Sbjct: 284 GTVDCVQASRAALDKATVLLSMSKGGRRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSG 343
Query: 529 VVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQMT 584
+SEA C+++L +P F+HE+V +A++M +E + +LDLL+ + IT +QM
Sbjct: 344 DISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITLDQMK 403
Query: 585 KGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
+G+ RI + + D+ LD+P++ +VE + G
Sbjct: 404 RGYERIYNEIPDINLDVPHSYSMLERFVEECFQAG 438
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 217 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXX 276
+K + +++EY E GD E +R+L + V A+ LA+E + +
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 277 XXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKS 333
S++ + K F +L + L +LALD P A L + A+ +G L +++ S
Sbjct: 225 DLCGTVMSTNDVEKSFDKLLKELPELALDTPRAPQLVGQFIARAVGDGILCNTYIDS 281
Score = 82 (33.9 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 31/143 (21%), Positives = 60/143 (41%)
Query: 319 VAISEGWLD-ASFMKSLGEDGRVQQE-------DEKVKRYKEEVVTIIHEYFLSDDIPEL 370
V S LD A+ + S+ + GR + + V +E+ ++ EY LS DI E
Sbjct: 289 VQASRAALDKATVLLSMSKGGRRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGDISEA 348
Query: 371 IRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--KEMASVLLSALHIEIFSTEDIVNGFVM 428
L++L P F+ + + I + ++ K + +L S + + + G+
Sbjct: 349 EHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITLDQMKRGYER 408
Query: 429 LLESAEDTALDILDASNELALFL 451
+ D LD+ + + L F+
Sbjct: 409 IYNEIPDINLDVPHSYSMLERFV 431
Score = 37 (18.1 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 565 MLD-LLQECFSEGLIT 579
ML+ ++ECF G+I+
Sbjct: 426 MLERFVEECFQAGIIS 441
>ZFIN|ZDB-GENE-030131-9847 [details] [associations]
symbol:pdcd4b "programmed cell death 4b"
species:7955 "Danio rerio" [GO:0016070 "RNA metabolic process"
evidence=IEA] InterPro:IPR016021 InterPro:IPR016024
ZFIN:ZDB-GENE-030131-9847 SUPFAM:SSF48371 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 HOVERGEN:HBG052841 EMBL:BC045513 EMBL:BC065341
IPI:IPI00613770 RefSeq:NP_945329.1 UniGene:Dr.77195 SMR:Q7ZVK1
STRING:Q7ZVK1 GeneID:321061 KEGG:dre:321061 CTD:321061
InParanoid:Q7ZVK1 NextBio:20807215 Uniprot:Q7ZVK1
Length = 470
Score = 363 (132.8 bits), Expect = 8.7e-33, P = 8.7e-33
Identities = 103/341 (30%), Positives = 155/341 (45%)
Query: 5 GAGGKGTWGKLLDTDVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIEE 62
GAGGKG WG + E +D DPNYD+ +E V T+ PLD+ ++K V I++E
Sbjct: 117 GAGGKGVWGTPGEVYGEDEVDYKDPNYDAEQE--NCVYETVVLPLDEEAFEKTVTPIVQE 174
Query: 63 YFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPD 122
YF GD A L EL VS+A++ +E+ S LLS L V++
Sbjct: 175 YFEHGDANEVAELLAELNLGSMRGDVPMLAVSLALEAKASHRELTSRLLSELCGRVLTAG 234
Query: 123 QIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGFQ 182
++ F LL+ F+ARAV D ILP FL K +
Sbjct: 235 DVQASFHKLLKELPDLVLDTPGAPQMLGQFIARAVADSILPKTFLDGYKGRVDCEYARAA 294
Query: 183 VIQTAEKSYLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCIR 241
+ + A +S ++ WG G V ++ K++ LL+EY+ SGD EA RC+R
Sbjct: 295 LDRAAVLLRMSRWTGLR-IDSLWGSGGGQRPVTQLIKEVNLLLKEYLLSGDTVEAERCLR 353
Query: 242 ELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXX---XXXXXSSSQMAKGFARLEES 298
EL V FHHE V A+++ +E T E + QM +GF R+
Sbjct: 354 ELEVPHFHHEFVYEAVIMVLE-STGERTLQMLLQLLKCLCSSTIITVDQMRRGFERVYLD 412
Query: 299 LDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGR 339
+ D+++D+P A ++ + V + + G +D GR
Sbjct: 413 MPDISIDVPCAYSILEQFVEQSFNAGVIDRKLRDLCPSRGR 453
Score = 309 (113.8 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 87/281 (30%), Positives = 138/281 (49%)
Query: 344 DEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE 403
DE+ +++ V I+ EYF D E+ L +L ++LA++ K +E
Sbjct: 160 DEEA--FEKTVTPIVQEYFEHGDANEVAELLAELNLGSMRGDVPMLAVSLALEAKASHRE 217
Query: 404 MASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPL 463
+ S LLS L + + D+ F LL+ D LD A L F+ARAV D +L
Sbjct: 218 LTSRLLSELCGRVLTAGDVQASFHKLLKELPDLVLDTPGAPQMLGQFIARAVADSILPKT 277
Query: 464 NLEEISSKLPPNCSGSETVRVARSLIAARHAGERLLRCWGGGTGWA-VEDAKDKIMKLLE 522
L+ ++ + + R A L +R G R+ WG G G V ++ LL+
Sbjct: 278 FLDGYKGRVDCEYARAALDRAAVLLRMSRWTGLRIDSLWGSGGGQRPVTQLIKEVNLLLK 337
Query: 523 EYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLD-LLQ--ECF-SEGLI 578
EY G EA +C+R+L +P F+HE V +A++M +E +R L LLQ +C S +I
Sbjct: 338 EYLLSGDTVEAERCLRELEVPHFHHEFVYEAVIMVLESTGERTLQMLLQLLKCLCSSTII 397
Query: 579 TTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
T +QM +GF R+ + D+++D+P A +VE + G
Sbjct: 398 TVDQMRRGFERVYLDMPDISIDVPCAYSILEQFVEQSFNAG 438
>UNIPROTKB|Q98TX3 [details] [associations]
symbol:PDCD4 "Programmed cell death protein 4" species:9031
"Gallus gallus" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS;IMP] [GO:0005829 "cytosol" evidence=ISS] [GO:0007569
"cell aging" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0043508 "negative regulation of JUN
kinase activity" evidence=IDA] InterPro:IPR016021
InterPro:IPR016024 GO:GO:0005829 GO:GO:0005634 GO:GO:0045892
SUPFAM:SSF48371 GO:GO:0003723 GO:GO:0043508 GO:GO:0016070
GO:GO:0007569 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 EMBL:AF321288 IPI:IPI00576056
RefSeq:NP_989635.1 UniGene:Gga.4916 ProteinModelPortal:Q98TX3
SMR:Q98TX3 STRING:Q98TX3 PRIDE:Q98TX3 GeneID:374191 KEGG:gga:374191
CTD:27250 eggNOG:NOG249108 HOGENOM:HOG000261612 HOVERGEN:HBG052841
InParanoid:Q98TX3 OrthoDB:EOG4GMTX3 NextBio:20813695 Uniprot:Q98TX3
Length = 467
Score = 357 (130.7 bits), Expect = 4.1e-32, P = 4.1e-32
Identities = 104/328 (31%), Positives = 156/328 (47%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 115 GAGGKGVWGTPGQVYDVEE-VDIKDPNYDDDQE--NCVYETVVLPLDERAFEKTLTPIIQ 171
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRL-VSMAMDRHDKEKEMASVLLSALYADVIS 120
EYF GD + L++L E Y + L VS+A++ +EM S L+S L V+S
Sbjct: 172 EYFEHGDTNEVSEMLKDLNLGEMK-YSVPVLAVSLALEGKASHREMTSKLISDLCGTVVS 230
Query: 121 PDQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKG 180
+ F LL+ F+ARAV D IL ++ K T+ + +
Sbjct: 231 KTDVEKSFDKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSSTYIDGYKGTVDSI-QA 289
Query: 181 FQVIQTAEKSYLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRC 239
+ A LS + ++ WG G +V+ + K+I LL+EY+ SGD EA RC
Sbjct: 290 RAALDRATV-LLSVTKGGKRIDNVWGSGGGQQSVKHLVKEIDMLLKEYLLSGDLLEAERC 348
Query: 240 IRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXS---SSQMAKGFARLE 296
++EL V FHHE+V A+V+ +E T E S QM +G+ R+
Sbjct: 349 LQELEVPHFHHELVYEAIVMVLE-STGEKTFKMMLDLLKSLSRSSVITMDQMKRGYERVY 407
Query: 297 ESLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 408 CEIPDINLDVPHSYSVLERFVEECFQAG 435
Score = 311 (114.5 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 84/281 (29%), Positives = 143/281 (50%)
Query: 344 DEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE 403
DE+ +++ + II EYF D E+ L+DL E ++LA++ K +E
Sbjct: 158 DERA--FEKTLTPIIQEYFEHGDTNEVSEMLKDLNLGEMKYSVPVLAVSLALEGKASHRE 215
Query: 404 MASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPL 463
M S L+S L + S D+ F LL+ D LD A + F+ARAV D +L+
Sbjct: 216 MTSKLISDLCGTVVSKTDVEKSFDKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSST 275
Query: 464 NLEEISSKLPPNCSGSETVRVARSLIAARHAGERLLRCWGGGTGW-AVEDAKDKIMKLLE 522
++ + + + A L++ G+R+ WG G G +V+ +I LL+
Sbjct: 276 YIDGYKGTVD-SIQARAALDRATVLLSVTKGGKRIDNVWGSGGGQQSVKHLVKEIDMLLK 334
Query: 523 EYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLI 578
EY G + EA +C+++L +P F+HE+V +A+VM +E ++ MLDLL+ +I
Sbjct: 335 EYLLSGDLLEAERCLQELEVPHFHHELVYEAIVMVLESTGEKTFKMMLDLLKSLSRSSVI 394
Query: 579 TTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
T +QM +G+ R+ + D+ LD+P++ +VE + G
Sbjct: 395 TMDQMKRGYERVYCEIPDINLDVPHSYSVLERFVEECFQAG 435
Score = 120 (47.3 bits), Expect = 0.00058, P = 0.00058
Identities = 54/235 (22%), Positives = 96/235 (40%)
Query: 217 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXX 276
+K + +++EY E GD E +++L + + V A+ LA+E + +
Sbjct: 163 EKTLTPIIQEYFEHGDTNEVSEMLKDLNLGEMKYSVPVLAVSLALEGKASHREMTSKLIS 222
Query: 277 XXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGE 336
S + + K F +L + L DL LD P A L + A+ +G L ++++ G
Sbjct: 223 DLCGTVVSKTDVEKSFDKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSSTYID--GY 280
Query: 337 DGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMD 396
G V D R + T++ + I ++ G + + L K I + +
Sbjct: 281 KGTV---DSIQARAALDRATVLLSVTKGG---KRIDNVWGSGGGQQSVKHLVKEIDMLLK 334
Query: 397 RKNREKEM--ASVLLSALHIEIFSTEDIVNGFVMLLESA-EDTALDILDASNELA 448
++ A L L + F E + VM+LES E T +LD L+
Sbjct: 335 EYLLSGDLLEAERCLQELEVPHFHHELVYEAIVMVLESTGEKTFKMMLDLLKSLS 389
>UNIPROTKB|F1NIY3 [details] [associations]
symbol:PDCD4 "Programmed cell death protein 4" species:9031
"Gallus gallus" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007569 "cell aging"
evidence=IEA] InterPro:IPR016021 InterPro:IPR016024 GO:GO:0005829
SUPFAM:SSF48371 GO:GO:0016070 GO:GO:0007569 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
IPI:IPI00576056 OMA:LSMSKGG GeneTree:ENSGT00390000015948
EMBL:AADN02030890 EMBL:AADN02030891 Ensembl:ENSGALT00000014159
Uniprot:F1NIY3
Length = 467
Score = 356 (130.4 bits), Expect = 5.2e-32, P = 5.2e-32
Identities = 104/328 (31%), Positives = 155/328 (47%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 115 GAGGKGVWGTPGQVYDVEE-VDIKDPNYDDDQE--NCVYETVVLPLDERAFEKTLTPIIQ 171
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRL-VSMAMDRHDKEKEMASVLLSALYADVIS 120
EYF GD + L++L E Y + L VS+A++ +EM S L+S L V+S
Sbjct: 172 EYFEHGDTNEVSEMLKDLNLGEMK-YSVPVLAVSLALEGKASHREMTSKLISDLCGTVVS 230
Query: 121 PDQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKG 180
+ F LL+ F+ARAV D IL ++ K T+ +
Sbjct: 231 KTDVEKSFDKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSSTYIDGYKGTVDCI-QA 289
Query: 181 FQVIQTAEKSYLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRC 239
+ A LS + ++ WG G +V+ + K+I LL+EY+ SGD EA RC
Sbjct: 290 RAALDRATV-LLSVTKGGKRIDNVWGSGGGQQSVKHLVKEIDMLLKEYLLSGDLLEAERC 348
Query: 240 IRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXS---SSQMAKGFARLE 296
++EL V FHHE+V A+V+ +E T E S QM +G+ R+
Sbjct: 349 LQELEVPHFHHELVYEAIVMVLE-STGEKTFKMMLDLLKSLSRSSVITMDQMKRGYERVY 407
Query: 297 ESLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 408 CEIPDINLDVPHSYSVLERFVEECFQAG 435
Score = 311 (114.5 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 85/282 (30%), Positives = 144/282 (51%)
Query: 344 DEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE 403
DE+ +++ + II EYF D E+ L+DL E ++LA++ K +E
Sbjct: 158 DERA--FEKTLTPIIQEYFEHGDTNEVSEMLKDLNLGEMKYSVPVLAVSLALEGKASHRE 215
Query: 404 MASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPL 463
M S L+S L + S D+ F LL+ D LD A + F+ARAV D +L+
Sbjct: 216 MTSKLISDLCGTVVSKTDVEKSFDKLLKDLPDLVLDSPRAPQLVGQFIARAVGDGILSST 275
Query: 464 NLEEISSKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGW-AVEDAKDKIMKLL 521
++ + +C + A L++ G+R+ WG G G +V+ +I LL
Sbjct: 276 YIDGYKGTV--DCIQARAALDRATVLLSVTKGGKRIDNVWGSGGGQQSVKHLVKEIDMLL 333
Query: 522 EEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGL 577
+EY G + EA +C+++L +P F+HE+V +A+VM +E ++ MLDLL+ +
Sbjct: 334 KEYLLSGDLLEAERCLQELEVPHFHHELVYEAIVMVLESTGEKTFKMMLDLLKSLSRSSV 393
Query: 578 ITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
IT +QM +G+ R+ + D+ LD+P++ +VE + G
Sbjct: 394 ITMDQMKRGYERVYCEIPDINLDVPHSYSVLERFVEECFQAG 435
>UNIPROTKB|E2R334 [details] [associations]
symbol:PDCD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007569 "cell aging" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0016070 "RNA metabolic
process" evidence=IEA] InterPro:IPR016021 InterPro:IPR016024
GO:GO:0005829 SUPFAM:SSF48371 GO:GO:0016070 GO:GO:0007569
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 OMA:LSMSKGG GeneTree:ENSGT00390000015948
EMBL:AAEX03015527 EMBL:AAEX03015528 Ensembl:ENSCAFT00000017201
Uniprot:E2R334
Length = 471
Score = 353 (129.3 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 105/329 (31%), Positives = 152/329 (46%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 117 GAGGKGVWGTPGQVYDVEE-VDVKDPNYDDDQE--NCVYETVVLPLDETAFEKTLTPIIQ 173
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 174 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 233
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
+ + F LL+ F+ARAV D IL ++ K T+
Sbjct: 234 NDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV---- 289
Query: 182 QVIQTAEKS--YLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACR 238
Q +K+ LS + + WG G +V + K+I LL+EY+ SGD EA
Sbjct: 290 QARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGDISEAEH 349
Query: 239 CIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSS---SQMAKGFARL 295
C++EL V FHHE+V A+V+ +E T E S+ QM +G+ R+
Sbjct: 350 CLKELEVPHFHHELVYEAIVMVLE-STGESTFKMILDLLKSLWKSSTITLDQMKRGYERI 408
Query: 296 EESLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 409 YNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 323 (118.8 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 88/276 (31%), Positives = 140/276 (50%)
Query: 350 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 409
+++ + II EYF D E+ L DL E ++LA++ K +EM S LL
Sbjct: 164 FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 223
Query: 410 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 469
S L + ST D+ F LL+ + ALD A + F+ARAV D +L ++ S
Sbjct: 224 SDLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID--S 281
Query: 470 SKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGW-AVEDAKDKIMKLLEEYESG 527
K +C + A L++ G+R WG G G +V +I LL+EY
Sbjct: 282 YKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLS 341
Query: 528 GVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQM 583
G +SEA C+++L +P F+HE+V +A+VM +E + +LDLL+ + IT +QM
Sbjct: 342 GDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESTFKMILDLLKSLWKSSTITLDQM 401
Query: 584 TKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
+G+ RI + + D+ LD+P++ +VE + G
Sbjct: 402 KRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 115 (45.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 217 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXX 276
+K + +++EY E GD E +R+L + V A+ LA+E + +
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 277 XXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKS 333
S++ + K F +L + L +LALD P A L + A+ +G L +++ S
Sbjct: 225 DLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDS 281
Score = 81 (33.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 23/109 (21%), Positives = 47/109 (43%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--K 402
+ V +E+ ++ EY LS DI E L++L P F+ + + I + ++ K
Sbjct: 322 QSVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESTFK 381
Query: 403 EMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFL 451
+ +L S + + + G+ + D LD+ + + L F+
Sbjct: 382 MILDLLKSLWKSSTITLDQMKRGYERIYNEIPDINLDVPHSYSVLERFV 430
>FB|FBgn0030520 [details] [associations]
symbol:Pdcd4 "Programmed cell death 4 ortholog" species:7227
"Drosophila melanogaster" [GO:0016070 "RNA metabolic process"
evidence=IEA] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IMP] [GO:0030727 "germarium-derived
female germ-line cyst formation" evidence=IMP] InterPro:IPR016021
InterPro:IPR016024 SUPFAM:SSF48371 EMBL:AE014298 GO:GO:0016070
GO:GO:0030727 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 GO:GO:2000738
GeneTree:ENSGT00390000015948 EMBL:BT023835 RefSeq:NP_001096977.1
RefSeq:NP_572918.1 UniGene:Dm.3698 SMR:Q9VY91 MINT:MINT-820685
STRING:Q9VY91 EnsemblMetazoa:FBtr0073840 EnsemblMetazoa:FBtr0112981
EnsemblMetazoa:FBtr0331711 EnsemblMetazoa:FBtr0331712 GeneID:32337
KEGG:dme:Dmel_CG10990 UCSC:CG10990-RA FlyBase:FBgn0030520
InParanoid:Q9VY91 OMA:AAGMVYE OrthoDB:EOG43N5TZ GenomeRNAi:32337
NextBio:777994 Uniprot:Q9VY91
Length = 509
Score = 363 (132.8 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 102/343 (29%), Positives = 156/343 (45%)
Query: 5 GAGGKGTWGKLLDTDV--ESHIDRNDPNYDS--GEEPYQLVGATISDPLDDYKKAVASII 60
G GGKG WG L ++ E + D NDPNYDS + +L +++ K I+
Sbjct: 147 GGGGKGVWG-LPGSEALAEVYEDENDPNYDSECNDRNVELREVITEITREEFFKLAEPIV 205
Query: 61 EEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVIS 120
EY+ GD A E+ + + LV +AMD D ++EM SVL+S LY VI+
Sbjct: 206 LEYYEHGDPHEVALSFDEILQAPMREHVTSILVEIAMDHKDSQREMTSVLISDLYGRVIT 265
Query: 121 PDQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKG 180
I GF +LL + F+ARAV DD +PP F+ ++ + L G
Sbjct: 266 GKDIEKGFNMLLANLPDLVLDTPEAPIMLGNFMARAVADDCIPPKFVAKSGEELRHLGLG 325
Query: 181 FQVIQTAEKS-YLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACR 238
Q ++ L H ++ WG G V+ + ++ LL+EY+ S D EA R
Sbjct: 326 EHAEQALRRADSLIYKHVWAHLDNVWGMGGPLRPVKTITMQMELLLKEYLSSRDVAEAQR 385
Query: 239 CIRELGVSFFHHEVVKRALVLAMEI--RTAEPXXXXXXXXXXXXXXXSSSQMAKGFARLE 296
C+R L V +HHE+V A+V+ +E +T E + M +GF R
Sbjct: 386 CLRALEVPHYHHELVYEAIVMTLESLSQTTEEAMCELLKQLDLTCLVLPAGMEQGFLRAF 445
Query: 297 ESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGR 339
+ + D+ LD+P A + V G+L + ++ GR
Sbjct: 446 DDMADIVLDVPLAYIILDRFVERCNRAGFLTDKIINNVPSRGR 488
Score = 307 (113.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 91/274 (33%), Positives = 145/274 (52%)
Query: 357 IIHEYFLSDDIPELIRSLED-LGAPEFNPIFLKKVITLAMDRKNREKEMASVLLSALHIE 415
I+ EY+ D E+ S ++ L AP + ++ +AMD K+ ++EM SVL+S L+
Sbjct: 204 IVLEYYEHGDPHEVALSFDEILQAPMREHV-TSILVEIAMDHKDSQREMTSVLISDLYGR 262
Query: 416 IFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEISSKLPPN 475
+ + +DI GF MLL + D LD +A L F+ARAV DD + P + + +L
Sbjct: 263 VITGKDIEKGFNMLLANLPDLVLDTPEAPIMLGNFMARAVADDCIPPKFVAKSGEELRHL 322
Query: 476 CSGS---ETVRVARSLIAARHAGERLLRCWG-GGTGWAVEDAKDKIMKLLEEYESGGVVS 531
G + +R A SLI +H L WG GG V+ ++ LL+EY S V+
Sbjct: 323 GLGEHAEQALRRADSLIY-KHVWAHLDNVWGMGGPLRPVKTITMQMELLLKEYLSSRDVA 381
Query: 532 EACQCIRDLGMPFFNHEVVKKALVMAMEKKN----DRMLDLLQECFSEGLITTNQMTKGF 587
EA +C+R L +P ++HE+V +A+VM +E + + M +LL++ L+ M +GF
Sbjct: 382 EAQRCLRALEVPHYHHELVYEAIVMTLESLSQTTEEAMCELLKQLDLTCLVLPAGMEQGF 441
Query: 588 TRIKDGLDDLALDIPNAKEKFTFYVEYARKKGWL 621
R D + D+ LD+P A +VE + G+L
Sbjct: 442 LRAFDDMADIVLDVPLAYIILDRFVERCNRAGFL 475
>UNIPROTKB|A4IFD1 [details] [associations]
symbol:PDCD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007569 "cell aging" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] InterPro:IPR016021 InterPro:IPR016024 GO:GO:0005829
SUPFAM:SSF48371 GO:GO:0016070 GO:GO:0007569 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
CTD:27250 eggNOG:NOG249108 HOGENOM:HOG000261612 HOVERGEN:HBG052841
OrthoDB:EOG4GMTX3 OMA:LSMSKGG GeneTree:ENSGT00390000015948
EMBL:DAAA02059210 EMBL:BC134522 IPI:IPI00713642
RefSeq:NP_001077116.1 UniGene:Bt.4770 SMR:A4IFD1 STRING:A4IFD1
Ensembl:ENSBTAT00000025886 GeneID:506724 KEGG:bta:506724
InParanoid:A4IFD1 NextBio:20867729 Uniprot:A4IFD1
Length = 469
Score = 352 (129.0 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 105/329 (31%), Positives = 152/329 (46%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 117 GAGGKGVWGTPGQVYDVEE-VDVRDPNYDDDQE--NCVYETVVLPLDEMAFEKTLTPIIQ 173
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 174 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 233
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
+ + F LL+ F+ARAV D IL ++ K T+
Sbjct: 234 NDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV---- 289
Query: 182 QVIQTAEKS--YLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACR 238
Q +K+ LS + + WG G +V + K+I LL+EY+ SGD EA
Sbjct: 290 QARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGDMSEAEH 349
Query: 239 CIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSS---SQMAKGFARL 295
C++EL V FHHE+V A+V+ +E T E S+ QM +G+ R+
Sbjct: 350 CLKELEVPHFHHELVYEAIVMVLE-STGESTFKMILDLLKSLWKSSTITLDQMKRGYERI 408
Query: 296 EESLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 409 YNEIPDINLDVPHSYSVLERFVEDCFQAG 437
Score = 320 (117.7 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 87/270 (32%), Positives = 138/270 (51%)
Query: 350 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 409
+++ + II EYF D E+ L DL E ++LA++ K +EM S LL
Sbjct: 164 FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 223
Query: 410 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 469
S L + ST D+ F LL+ + ALD A + F+ARAV D +L ++ S
Sbjct: 224 SDLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID--S 281
Query: 470 SKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGW-AVEDAKDKIMKLLEEYESG 527
K +C + A L++ G+R WG G G +V +I LL+EY
Sbjct: 282 YKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLS 341
Query: 528 GVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQM 583
G +SEA C+++L +P F+HE+V +A+VM +E + +LDLL+ + IT +QM
Sbjct: 342 GDMSEAEHCLKELEVPHFHHELVYEAIVMVLESTGESTFKMILDLLKSLWKSSTITLDQM 401
Query: 584 TKGFTRIKDGLDDLALDIPNAKEKFTFYVE 613
+G+ RI + + D+ LD+P++ +VE
Sbjct: 402 KRGYERIYNEIPDINLDVPHSYSVLERFVE 431
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 56/234 (23%), Positives = 94/234 (40%)
Query: 217 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXX 276
+K + +++EY E GD E +R+L + V A+ LA+E + +
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 277 XXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGE 336
S++ + K F +L + L +LALD P A L + A+ +G L +++ S
Sbjct: 225 DLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSY-- 282
Query: 337 DGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMD 396
G V + K V+ + + D S+ G + + L K I + +
Sbjct: 283 KGTVDCVQARAALDKATVLLSMSKGGKRKD------SVWGSGGGQQSVNHLVKEIDMLLK 336
Query: 397 RKNREKEMASV--LLSALHIEIFSTEDIVNGFVMLLESA-EDTALDILDASNEL 447
+M+ L L + F E + VM+LES E T ILD L
Sbjct: 337 EYLLSGDMSEAEHCLKELEVPHFHHELVYEAIVMVLESTGESTFKMILDLLKSL 390
>MGI|MGI:107490 [details] [associations]
symbol:Pdcd4 "programmed cell death 4" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007569 "cell aging" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR016021 InterPro:IPR016024 MGI:MGI:107490 GO:GO:0005829
GO:GO:0005634 GO:GO:0006915 GO:GO:0045892 SUPFAM:SSF48371
GO:GO:0003723 GO:GO:0043508 GO:GO:0016070 GO:GO:0007569
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 PDB:3EIQ PDBsum:3EIQ CTD:27250 eggNOG:NOG249108
HOGENOM:HOG000261612 HOVERGEN:HBG052841 OrthoDB:EOG4GMTX3 PDB:2KZT
PDBsum:2KZT OMA:LSMSKGG ChiTaRS:PDCD4 EMBL:D50465 EMBL:D86344
EMBL:AB010139 EMBL:DQ479921 EMBL:CT010188 EMBL:AK134366
EMBL:AK172654 EMBL:BC055739 IPI:IPI00323064 PIR:JC4523
RefSeq:NP_001161963.1 RefSeq:NP_001161964.1 RefSeq:NP_035180.2
UniGene:Mm.1605 PDB:2HM8 PDB:2IOL PDB:2ION PDB:2IOS PDB:2NSZ
PDBsum:2HM8 PDBsum:2IOL PDBsum:2ION PDBsum:2IOS PDBsum:2NSZ
ProteinModelPortal:Q61823 SMR:Q61823 IntAct:Q61823
MINT:MINT-7012023 STRING:Q61823 PhosphoSite:Q61823 PaxDb:Q61823
PRIDE:Q61823 Ensembl:ENSMUST00000025931 Ensembl:ENSMUST00000074371
Ensembl:ENSMUST00000165617 GeneID:18569 KEGG:mmu:18569
UCSC:uc008hxb.2 GeneTree:ENSGT00390000015948 InParanoid:Q61823
EvolutionaryTrace:Q61823 NextBio:294400 Bgee:Q61823
CleanEx:MM_PDCD4 Genevestigator:Q61823
GermOnline:ENSMUSG00000024975 Uniprot:Q61823
Length = 469
Score = 351 (128.6 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 105/329 (31%), Positives = 151/329 (45%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 117 GAGGKGVWGTPGQVYDVEE-VDVKDPNYDDDQE--NCVYETVVLPLDETAFEKTLTPIIQ 173
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 174 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 233
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
+ + F LL+ F+ARAV D IL ++ K T+
Sbjct: 234 NDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV---- 289
Query: 182 QVIQTAEKS--YLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACR 238
Q +K+ LS + + WG G V + K+I LL+EY+ SGD EA
Sbjct: 290 QARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLSGDISEAEH 349
Query: 239 CIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSS---SQMAKGFARL 295
C++EL V FHHE+V A+V+ +E T E S+ QM +G+ R+
Sbjct: 350 CLKELEVPHFHHELVYEAIVMVLE-STGESAFKMILDLLKSLWKSSTITIDQMKRGYERI 408
Query: 296 EESLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 409 YNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 321 (118.1 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 88/276 (31%), Positives = 139/276 (50%)
Query: 350 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 409
+++ + II EYF D E+ L DL E ++LA++ K +EM S LL
Sbjct: 164 FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 223
Query: 410 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 469
S L + ST D+ F LL+ + ALD A + F+ARAV D +L ++ S
Sbjct: 224 SDLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID--S 281
Query: 470 SKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGWA-VEDAKDKIMKLLEEYESG 527
K +C + A L++ G+R WG G G V +I LL+EY
Sbjct: 282 YKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLS 341
Query: 528 GVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQM 583
G +SEA C+++L +P F+HE+V +A+VM +E + +LDLL+ + IT +QM
Sbjct: 342 GDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQM 401
Query: 584 TKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
+G+ RI + + D+ LD+P++ +VE + G
Sbjct: 402 KRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 115 (45.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 217 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXX 276
+K + +++EY E GD E +R+L + V A+ LA+E + +
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 277 XXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKS 333
S++ + K F +L + L +LALD P A L + A+ +G L +++ S
Sbjct: 225 DLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDS 281
Score = 80 (33.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 23/109 (21%), Positives = 47/109 (43%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNRE--K 402
+ V +E+ ++ EY LS DI E L++L P F+ + + I + ++ K
Sbjct: 322 QPVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFK 381
Query: 403 EMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFL 451
+ +L S + + + G+ + D LD+ + + L F+
Sbjct: 382 MILDLLKSLWKSSTITIDQMKRGYERIYNEIPDINLDVPHSYSVLERFV 430
>RGD|620816 [details] [associations]
symbol:Pdcd4 "programmed cell death 4" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005829 "cytosol" evidence=ISO;ISS]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0007569 "cell
aging" evidence=ISO;ISS] [GO:0016070 "RNA metabolic process"
evidence=IEA] [GO:0043508 "negative regulation of JUN kinase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR016021 InterPro:IPR016024
RGD:620816 GO:GO:0005829 GO:GO:0005634 GO:GO:0006915 GO:GO:0045892
SUPFAM:SSF48371 GO:GO:0003723 GO:GO:0043508 GO:GO:0016070
GO:GO:0007569 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 CTD:27250 eggNOG:NOG249108
HOGENOM:HOG000261612 HOVERGEN:HBG052841 OrthoDB:EOG4GMTX3
OMA:LSMSKGG GeneTree:ENSGT00390000015948 EMBL:AF239739
IPI:IPI00200435 IPI:IPI00798630 RefSeq:NP_071601.2
UniGene:Rn.206228 ProteinModelPortal:Q9JID1 SMR:Q9JID1
MINT:MINT-7138882 STRING:Q9JID1 PhosphoSite:Q9JID1 PRIDE:Q9JID1
Ensembl:ENSRNOT00000020155 Ensembl:ENSRNOT00000059153 GeneID:64031
KEGG:rno:64031 UCSC:RGD:620816 InParanoid:Q9JID1 NextBio:612654
ArrayExpress:Q9JID1 Genevestigator:Q9JID1
GermOnline:ENSRNOG00000014779 Uniprot:Q9JID1
Length = 469
Score = 351 (128.6 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 105/329 (31%), Positives = 151/329 (45%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 117 GAGGKGVWGTPGQVYDVEE-VDVKDPNYDDDQE--NCVYETVVLPLDETAFEKTLTPIIQ 173
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 174 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 233
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
+ + F LL+ F+ARAV D IL ++ K T+
Sbjct: 234 NDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV---- 289
Query: 182 QVIQTAEKS--YLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACR 238
Q +K+ LS + + WG G V + K+I LL+EY+ SGD EA
Sbjct: 290 QARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLSGDMSEAEH 349
Query: 239 CIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSS---SQMAKGFARL 295
C++EL V FHHE+V A+V+ +E T E S+ QM +G+ R+
Sbjct: 350 CLKELEVPHFHHELVYEAIVMVLE-STGESAFKMMLDLLKSLWKSSTITIDQMKRGYERI 408
Query: 296 EESLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 409 YNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 323 (118.8 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 89/276 (32%), Positives = 139/276 (50%)
Query: 350 YKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASVLL 409
+++ + II EYF D E+ L DL E ++LA++ K +EM S LL
Sbjct: 164 FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 223
Query: 410 SALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIS 469
S L + ST D+ F LL+ + ALD A + F+ARAV D +L ++ S
Sbjct: 224 SDLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYID--S 281
Query: 470 SKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGWA-VEDAKDKIMKLLEEYESG 527
K +C + A L++ G+R WG G G V +I LL+EY
Sbjct: 282 YKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQPVNHLVKEIDMLLKEYLLS 341
Query: 528 GVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGLITTNQM 583
G +SEA C+++L +P F+HE+V +A+VM +E + MLDLL+ + IT +QM
Sbjct: 342 GDMSEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMMLDLLKSLWKSSTITIDQM 401
Query: 584 TKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
+G+ RI + + D+ LD+P++ +VE + G
Sbjct: 402 KRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 52/228 (22%), Positives = 94/228 (41%)
Query: 217 KKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXX 276
+K + +++EY E GD E +R+L + V A+ LA+E + +
Sbjct: 165 EKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS 224
Query: 277 XXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGE 336
S++ + K F +L + L +LALD P A L + A+ +G L +++ S
Sbjct: 225 DLCGTVMSTNDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSY-- 282
Query: 337 DGRVQQEDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPI-FLKKVITLAM 395
G V + K V+ + + D S+ G + P+ L K I + +
Sbjct: 283 KGTVDCVQARAALDKATVLLSMSKGGKRKD------SVWGSGGGQ-QPVNHLVKEIDMLL 335
Query: 396 DRKNREKEMASV--LLSALHIEIFSTEDIVNGFVMLLESAEDTALDIL 441
+M+ L L + F E + VM+LES ++A ++
Sbjct: 336 KEYLLSGDMSEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMM 383
>UNIPROTKB|Q53EL6 [details] [associations]
symbol:PDCD4 "Programmed cell death protein 4" species:9606
"Homo sapiens" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISS;IDA;IMP] [GO:0043508 "negative regulation of JUN
kinase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0007569 "cell aging" evidence=IDA] [GO:0045786 "negative
regulation of cell cycle" evidence=NAS] [GO:0006915 "apoptotic
process" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR016021
InterPro:IPR016024 GO:GO:0005829 GO:GO:0005634 GO:GO:0006915
GO:GO:0045892 SUPFAM:SSF48371 GO:GO:0003723 EMBL:AL158163
GO:GO:0043508 GO:GO:0016070 GO:GO:0045786 GO:GO:0007569
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 PDB:2ZU6 PDBsum:2ZU6 CTD:27250 eggNOG:NOG249108
HOGENOM:HOG000261612 HOVERGEN:HBG052841 OrthoDB:EOG4GMTX3
EMBL:U83908 EMBL:U96628 EMBL:AK315295 EMBL:AK223623 EMBL:AL136368
EMBL:BC015036 EMBL:BC026104 EMBL:BC031049 IPI:IPI00240675
IPI:IPI00290110 PIR:JC5193 RefSeq:NP_055271.2 UniGene:Hs.711490
PDB:2GGF PDB:2KZT PDB:2RG8 PDB:3EIJ PDBsum:2GGF PDBsum:2KZT
PDBsum:2RG8 PDBsum:3EIJ ProteinModelPortal:Q53EL6 SMR:Q53EL6
DIP:DIP-29756N IntAct:Q53EL6 STRING:Q53EL6 PhosphoSite:Q53EL6
DMDM:74725796 PaxDb:Q53EL6 PRIDE:Q53EL6 DNASU:27250
Ensembl:ENST00000280154 Ensembl:ENST00000393104 GeneID:27250
KEGG:hsa:27250 UCSC:uc001kzh.3 GeneCards:GC10P112618
H-InvDB:HIX0009201 HGNC:HGNC:8763 HPA:CAB037024 HPA:HPA001032
HPA:HPA027214 MIM:608610 neXtProt:NX_Q53EL6 PharmGKB:PA33113
InParanoid:Q53EL6 OMA:LSMSKGG PhylomeDB:Q53EL6 BindingDB:Q53EL6
ChEMBL:CHEMBL1781868 ChiTaRS:PDCD4 EvolutionaryTrace:Q53EL6
GenomeRNAi:27250 NextBio:50179 ArrayExpress:Q53EL6 Bgee:Q53EL6
CleanEx:HS_PDCD4 Genevestigator:Q53EL6 GermOnline:ENSG00000150593
Uniprot:Q53EL6
Length = 469
Score = 350 (128.3 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 104/329 (31%), Positives = 151/329 (45%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 117 GAGGKGVWGTPGQVYDVEE-VDVKDPNYDDDQE--NCVYETVVLPLDERAFEKTLTPIIQ 173
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 174 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 233
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
+ F LL+ F+ARAV D IL ++ K T+
Sbjct: 234 TDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV---- 289
Query: 182 QVIQTAEKS--YLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACR 238
Q +K+ LS + + WG G +V + K+I LL+EY+ SGD EA
Sbjct: 290 QARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLLKEYLLSGDISEAEH 349
Query: 239 CIRELGVSFFHHEVVKRALVLAMEIRTAEPXXXXXXXXXXXXXXXSS---SQMAKGFARL 295
C++EL V FHHE+V A+++ +E T E S+ QM +G+ R+
Sbjct: 350 CLKELEVPHFHHELVYEAIIMVLE-STGESTFKMILDLLKSLWKSSTITVDQMKRGYERI 408
Query: 296 EESLDDLALDIPSARNLFQSIVPVAISEG 324
+ D+ LD+P + ++ + V G
Sbjct: 409 YNEIPDINLDVPHSYSVLERFVEECFQAG 437
Score = 324 (119.1 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 89/282 (31%), Positives = 143/282 (50%)
Query: 344 DEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE 403
DE+ +++ + II EYF D E+ L DL E ++LA++ K +E
Sbjct: 160 DERA--FEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHRE 217
Query: 404 MASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPL 463
M S LLS L + ST D+ F LL+ + ALD A + F+ARAV D +L
Sbjct: 218 MTSKLLSDLCGTVMSTTDVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNT 277
Query: 464 NLEEISSKLPPNC-SGSETVRVARSLIAARHAGERLLRCWGGGTGW-AVEDAKDKIMKLL 521
++ S K +C + A L++ G+R WG G G +V +I LL
Sbjct: 278 YID--SYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGGQQSVNHLVKEIDMLL 335
Query: 522 EEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGL 577
+EY G +SEA C+++L +P F+HE+V +A++M +E + +LDLL+ +
Sbjct: 336 KEYLLSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSST 395
Query: 578 ITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKG 619
IT +QM +G+ RI + + D+ LD+P++ +VE + G
Sbjct: 396 ITVDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAG 437
>ZFIN|ZDB-GENE-040426-1920 [details] [associations]
symbol:pdcd4a "programmed cell death 4a"
species:7955 "Danio rerio" [GO:0016070 "RNA metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR016021 InterPro:IPR016024 ZFIN:ZDB-GENE-040426-1920
SUPFAM:SSF48371 GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891
Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 eggNOG:NOG249108
HOGENOM:HOG000261612 HOVERGEN:HBG052841 EMBL:BC054680
IPI:IPI00509899 RefSeq:NP_998153.1 UniGene:Dr.18414
ProteinModelPortal:Q7SYL0 SMR:Q7SYL0 PRIDE:Q7SYL0 GeneID:406261
KEGG:dre:406261 CTD:406261 InParanoid:Q7SYL0 OrthoDB:EOG46MBJV
NextBio:20817895 ArrayExpress:Q7SYL0 Bgee:Q7SYL0 Uniprot:Q7SYL0
Length = 467
Score = 320 (117.7 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 88/276 (31%), Positives = 142/276 (51%)
Query: 345 EKVKRYKEEVVT-IIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKE 403
E +R E+ + I+ EYF D E+ L++L F ++L+++ K +E
Sbjct: 159 ELEERELEKTINPIVQEYFEHGDTKEVEMLLKELNLGHNRYEFTSLAVSLSLEGKASHRE 218
Query: 404 MASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPL 463
+ S LLS L + S D+ + F +L+ D LD +A L F+ARA+ D L
Sbjct: 219 LTSRLLSDLSGRVLSERDMSHAFDKMLKELPDLILDTPEAPLMLGQFIARAIADHALPMS 278
Query: 464 NLEEISSKLPPNCSGSETVRVARSLIAARHAG-ERLLRCWGGGTGWA-VEDAKDKIMKLL 521
L+ K+ +C + S++ + G RL WG G G V+ ++ LL
Sbjct: 279 FLDCYKGKV--DCDHARAALDRASVLLSMKRGIMRLDNVWGVGGGQRPVKHLIKEMNLLL 336
Query: 522 EEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR----MLDLLQECFSEGL 577
+EY G +SEA C+RDL +P F+HE+V +A+VM +E D M+ LL+ + GL
Sbjct: 337 KEYLVSGELSEAEHCLRDLEVPHFHHELVYEAVVMVLESTGDAALQMMVKLLKSFWQSGL 396
Query: 578 ITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVE 613
IT +QM +GF R+ D L ++ LD+P+A+ +V+
Sbjct: 397 ITLDQMNRGFQRVYDELPEINLDVPHAQSIMEAFVD 432
Score = 317 (116.6 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 95/341 (27%), Positives = 153/341 (44%)
Query: 5 GAGGKGTWGKL-LDTDVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG + ++E D DPNYD + + AT+ L++ +K + I++
Sbjct: 117 GAGGKGVWGAAGMVYELEEP-DAKDPNYDESAQG-DTIYATVVPELEERELEKTINPIVQ 174
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD + L+EL F VS++++ +E+ S LLS L V+S
Sbjct: 175 EYFEHGDTKEVEMLLKELNLGHNRYEFTSLAVSLSLEGKASHRELTSRLLSDLSGRVLSE 234
Query: 122 DQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPPAFLTRAKKTLPAASKGF 181
+ F +L+ F+ARA+ D LP +FL K +
Sbjct: 235 RDMSHAFDKMLKELPDLILDTPEAPLMLGQFIARAIADHALPMSFLDCYKGKVDC-DHAR 293
Query: 182 QVIQTAEKSYLSAPHHAELVERRWG-GSTHITVEEVKKKIADLLREYVESGDAFEACRCI 240
+ A LS ++ WG G V+ + K++ LL+EY+ SG+ EA C+
Sbjct: 294 AALDRASV-LLSMKRGIMRLDNVWGVGGGQRPVKHLIKEMNLLLKEYLVSGELSEAEHCL 352
Query: 241 RELGVSFFHHEVVKRALVLAMEIR--TAEPXXXXXXXXXXXXXXXSSSQMAKGFARLEES 298
R+L V FHHE+V A+V+ +E A + QM +GF R+ +
Sbjct: 353 RDLEVPHFHHELVYEAVVMVLESTGDAALQMMVKLLKSFWQSGLITLDQMNRGFQRVYDE 412
Query: 299 LDDLALDIPSARNLFQSIVPVAISEGWLDASFMKSLGEDGR 339
L ++ LD+P A+++ ++ V + E + S GR
Sbjct: 413 LPEINLDVPHAQSIMEAFVDLCYQESVITKQLRDSCPTRGR 453
>UNIPROTKB|Q5VZS7 [details] [associations]
symbol:PDCD4 "Programmed cell death protein 4" species:9606
"Homo sapiens" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR016021 InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 EMBL:AL158163 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
HOGENOM:HOG000261612 HOVERGEN:HBG052841 EMBL:AL136368
UniGene:Hs.711490 HGNC:HGNC:8763 ChiTaRS:PDCD4 IPI:IPI00647084
SMR:Q5VZS7 Ensembl:ENST00000444997 Uniprot:Q5VZS7
Length = 231
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 51/132 (38%), Positives = 67/132 (50%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 103 GAGGKGVWGTPGQVYDVEE-VDVKDPNYDDDQE--NCVYETVVLPLDERAFEKTLTPIIQ 159
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 160 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 219
Query: 122 DQIRDGFVILLE 133
+ F LL+
Sbjct: 220 TDVEKSFDKLLK 231
>UNIPROTKB|J9NX01 [details] [associations]
symbol:PDCD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016070 "RNA metabolic process" evidence=IEA]
InterPro:IPR016021 InterPro:IPR016024 SUPFAM:SSF48371 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 GeneTree:ENSGT00390000015948 EMBL:AAEX03015527
EMBL:AAEX03015528 Ensembl:ENSCAFT00000043851 Uniprot:J9NX01
Length = 283
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/132 (38%), Positives = 68/132 (51%)
Query: 5 GAGGKGTWGKLLDT-DVESHIDRNDPNYDSGEEPYQLVGATISDPLDD--YKKAVASIIE 61
GAGGKG WG DVE +D DPNYD +E V T+ PLD+ ++K + II+
Sbjct: 117 GAGGKGVWGTPGQVYDVEE-VDVKDPNYDDDQE--NCVYETVVLPLDETAFEKTLTPIIQ 173
Query: 62 EYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISP 121
EYF GD A LR+L E VS+A++ +EM S LLS L V+S
Sbjct: 174 EYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMST 233
Query: 122 DQIRDGFVILLE 133
+ + F LL+
Sbjct: 234 NDVEKSFDKLLK 245
>GENEDB_PFALCIPARUM|PF14_0546 [details] [associations]
symbol:PF14_0546 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016021 InterPro:IPR016024 SUPFAM:SSF48371 EMBL:AE014187
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 RefSeq:XP_001348720.1
ProteinModelPortal:Q8IKQ7 PRIDE:Q8IKQ7
EnsemblProtists:PF14_0546:mRNA GeneID:812128 KEGG:pfa:PF14_0546
EuPathDB:PlasmoDB:PF3D7_1457300 HOGENOM:HOG000281995 OMA:DEAFRCI
ProtClustDB:CLSZ2446728 Uniprot:Q8IKQ7
Length = 639
Score = 164 (62.8 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 67/287 (23%), Positives = 118/287 (41%)
Query: 343 EDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREK 402
EDEK K +K++ + ++F D E+I L + ++ F++ I + + N +
Sbjct: 340 EDEK-KEFKKKSRDFLIDFFNDGDTNEVIEFLNNSNNLFYHE-FIRISIIESFSKNNICR 397
Query: 403 EMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAP 462
+ S LL L + S DIV F+ ++ +D +D A FL R + DDVL P
Sbjct: 398 KYISYLLDNLCEKYVSKTDIVIAFIRIIGYIDDYEIDFPQAKEMTCKFLLRCIYDDVLYP 457
Query: 463 LNLEEISSKLPPNCSGSETVRVARSLIAARHAGE--RLLRCWGGGTGWAVEDAKDKIMKL 520
L +I +G + I + + W + K KI
Sbjct: 458 AFLSDIYKLHIGGVTGMMICNKTQQRINDKRKLNLNNINYIWDEDDTYEKMKLKRKINNT 517
Query: 521 LEEYESGGVVSEACQCIRDLGMPFFN---HEVVKKALVMAME-KKNDRMLD--LLQECFS 574
L EY + E D +P ++ + VVKK V+ ++ ND L L+ F+
Sbjct: 518 LLEYFYSYIDEEEFYLYVDEFLPLYHDLCNYVVKKIFVLNVDINNNDLNLSYKLVDHLFN 577
Query: 575 EGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKGWL 621
+ +I+ + G + + + D+ LDIP E + + K ++
Sbjct: 578 KNIISEKNVEGGLREVLNSIKDIMLDIPKYPEDLKKIITHLLTKKYI 624
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 58/288 (20%), Positives = 112/288 (38%)
Query: 45 ISDPLDDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEK 104
+ D ++KK + ++F+ GD L + YH FI+ + + +++ +
Sbjct: 339 VEDEKKEFKKKSRDFLIDFFNDGDTNEVIEFLNNSNNLFYHE-FIRISIIESFSKNNICR 397
Query: 105 EMASVLLSALYADVISPDQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPP 164
+ S LL L +S I F+ ++ F+ R + DD+L P
Sbjct: 398 KYISYLLDNLCEKYVSKTDIVIAFIRIIGYIDDYEIDFPQAKEMTCKFLLRCIYDDVLYP 457
Query: 165 AFLTRAKKTLPAASKGFQVI-QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADL 223
AFL+ K G + +T ++ + + W ++K+KI +
Sbjct: 458 AFLSDIYKLHIGGVTGMMICNKTQQRINDKRKLNLNNINYIWDEDDTYEKMKLKRKINNT 517
Query: 224 LREYVESG-DAFEACRCIRELGVSFFH---HEVVKRALVLAMEIRTAEPXXXXXXXXXXX 279
L EY S D E + E + +H + VVK+ VL ++I +
Sbjct: 518 LLEYFYSYIDEEEFYLYVDEF-LPLYHDLCNYVVKKIFVLNVDINNNDLNLSYKLVDHLF 576
Query: 280 XXXXSSSQMAKGFAR-LEESLDDLALDIPSARNLFQSIVPVAISEGWL 326
S + +G R + S+ D+ LDIP + I+ +++ ++
Sbjct: 577 NKNIISEKNVEGGLREVLNSIKDIMLDIPKYPEDLKKIITHLLTKKYI 624
Score = 107 (42.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 25/114 (21%), Positives = 60/114 (52%)
Query: 348 KRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASV 407
+ ++++ +I +FLS++I E I ++ L +N + ++I + D+ + + S
Sbjct: 75 EEFEKKCDLLIDNFFLSNNIQEFIEDIKSLNVKIYNDYLVLQLIRKSFDKDDESQMNVSC 134
Query: 408 LLSALHI-EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVL 460
LL+ L+I ++ + E + F +L S +D LD + +L +++D+++
Sbjct: 135 LLNILNITKLITPEQVQRAFEKILLSLDDIKLDCPLCYDIFLKYLRFSILDNII 188
Score = 87 (35.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 510 VEDAKDKIMK----LLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN--D 563
VED K + K L ++ + G +E + + + F+ HE ++ +++ + K N
Sbjct: 339 VEDEKKEFKKKSRDFLIDFFNDGDTNEVIEFLNNSNNLFY-HEFIRISIIESFSKNNICR 397
Query: 564 RMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKGWLLP 623
+ + L + E ++ + F RI +DD +D P AKE ++ L P
Sbjct: 398 KYISYLLDNLCEKYVSKTDIVIAFIRIIGYIDDYEIDFPQAKEMTCKFLLRCIYDDVLYP 457
Query: 624 AF 625
AF
Sbjct: 458 AF 459
Score = 70 (29.7 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 24/125 (19%), Positives = 55/125 (44%)
Query: 211 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRT-AEPX 269
++ EE +KK L+ + S + E I+ L V ++ +V + + + + ++
Sbjct: 72 LSFEEFEKKCDLLIDNFFLSNNIQEFIEDIKSLNVKIYNDYLVLQLIRKSFDKDDESQMN 131
Query: 270 XXXXXXXXXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDAS 329
+ Q+ + F ++ SLDD+ LD P ++F + +I + +D +
Sbjct: 132 VSCLLNILNITKLITPEQVQRAFEKILLSLDDIKLDCPLCYDIFLKYLRFSILDNIIDKN 191
Query: 330 FMKSL 334
++ L
Sbjct: 192 YIFKL 196
Score = 50 (22.7 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 21 ESHIDRNDPNYDSGEEPYQLVGATISDPLDDYKKAVASIIEEYFSTGDVEV 71
+ ++D NDP YDS E ++ +Y + V + + F DV +
Sbjct: 23 KKYVDMNDPIYDSEIEDENCFYTVVNAEEIEYSQKVCDMKNKMFE--DVNI 71
>UNIPROTKB|Q8IKQ7 [details] [associations]
symbol:PF14_0546 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016021 InterPro:IPR016024 SUPFAM:SSF48371 EMBL:AE014187
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 RefSeq:XP_001348720.1
ProteinModelPortal:Q8IKQ7 PRIDE:Q8IKQ7
EnsemblProtists:PF14_0546:mRNA GeneID:812128 KEGG:pfa:PF14_0546
EuPathDB:PlasmoDB:PF3D7_1457300 HOGENOM:HOG000281995 OMA:DEAFRCI
ProtClustDB:CLSZ2446728 Uniprot:Q8IKQ7
Length = 639
Score = 164 (62.8 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 67/287 (23%), Positives = 118/287 (41%)
Query: 343 EDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREK 402
EDEK K +K++ + ++F D E+I L + ++ F++ I + + N +
Sbjct: 340 EDEK-KEFKKKSRDFLIDFFNDGDTNEVIEFLNNSNNLFYHE-FIRISIIESFSKNNICR 397
Query: 403 EMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAP 462
+ S LL L + S DIV F+ ++ +D +D A FL R + DDVL P
Sbjct: 398 KYISYLLDNLCEKYVSKTDIVIAFIRIIGYIDDYEIDFPQAKEMTCKFLLRCIYDDVLYP 457
Query: 463 LNLEEISSKLPPNCSGSETVRVARSLIAARHAGE--RLLRCWGGGTGWAVEDAKDKIMKL 520
L +I +G + I + + W + K KI
Sbjct: 458 AFLSDIYKLHIGGVTGMMICNKTQQRINDKRKLNLNNINYIWDEDDTYEKMKLKRKINNT 517
Query: 521 LEEYESGGVVSEACQCIRDLGMPFFN---HEVVKKALVMAME-KKNDRMLD--LLQECFS 574
L EY + E D +P ++ + VVKK V+ ++ ND L L+ F+
Sbjct: 518 LLEYFYSYIDEEEFYLYVDEFLPLYHDLCNYVVKKIFVLNVDINNNDLNLSYKLVDHLFN 577
Query: 575 EGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKGWL 621
+ +I+ + G + + + D+ LDIP E + + K ++
Sbjct: 578 KNIISEKNVEGGLREVLNSIKDIMLDIPKYPEDLKKIITHLLTKKYI 624
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 58/288 (20%), Positives = 112/288 (38%)
Query: 45 ISDPLDDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEK 104
+ D ++KK + ++F+ GD L + YH FI+ + + +++ +
Sbjct: 339 VEDEKKEFKKKSRDFLIDFFNDGDTNEVIEFLNNSNNLFYHE-FIRISIIESFSKNNICR 397
Query: 105 EMASVLLSALYADVISPDQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDILPP 164
+ S LL L +S I F+ ++ F+ R + DD+L P
Sbjct: 398 KYISYLLDNLCEKYVSKTDIVIAFIRIIGYIDDYEIDFPQAKEMTCKFLLRCIYDDVLYP 457
Query: 165 AFLTRAKKTLPAASKGFQVI-QTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADL 223
AFL+ K G + +T ++ + + W ++K+KI +
Sbjct: 458 AFLSDIYKLHIGGVTGMMICNKTQQRINDKRKLNLNNINYIWDEDDTYEKMKLKRKINNT 517
Query: 224 LREYVESG-DAFEACRCIRELGVSFFH---HEVVKRALVLAMEIRTAEPXXXXXXXXXXX 279
L EY S D E + E + +H + VVK+ VL ++I +
Sbjct: 518 LLEYFYSYIDEEEFYLYVDEF-LPLYHDLCNYVVKKIFVLNVDINNNDLNLSYKLVDHLF 576
Query: 280 XXXXSSSQMAKGFAR-LEESLDDLALDIPSARNLFQSIVPVAISEGWL 326
S + +G R + S+ D+ LDIP + I+ +++ ++
Sbjct: 577 NKNIISEKNVEGGLREVLNSIKDIMLDIPKYPEDLKKIITHLLTKKYI 624
Score = 107 (42.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 25/114 (21%), Positives = 60/114 (52%)
Query: 348 KRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEMASV 407
+ ++++ +I +FLS++I E I ++ L +N + ++I + D+ + + S
Sbjct: 75 EEFEKKCDLLIDNFFLSNNIQEFIEDIKSLNVKIYNDYLVLQLIRKSFDKDDESQMNVSC 134
Query: 408 LLSALHI-EIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVL 460
LL+ L+I ++ + E + F +L S +D LD + +L +++D+++
Sbjct: 135 LLNILNITKLITPEQVQRAFEKILLSLDDIKLDCPLCYDIFLKYLRFSILDNII 188
Score = 87 (35.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 510 VEDAKDKIMK----LLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN--D 563
VED K + K L ++ + G +E + + + F+ HE ++ +++ + K N
Sbjct: 339 VEDEKKEFKKKSRDFLIDFFNDGDTNEVIEFLNNSNNLFY-HEFIRISIIESFSKNNICR 397
Query: 564 RMLDLLQECFSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKFTFYVEYARKKGWLLP 623
+ + L + E ++ + F RI +DD +D P AKE ++ L P
Sbjct: 398 KYISYLLDNLCEKYVSKTDIVIAFIRIIGYIDDYEIDFPQAKEMTCKFLLRCIYDDVLYP 457
Query: 624 AF 625
AF
Sbjct: 458 AF 459
Score = 70 (29.7 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 24/125 (19%), Positives = 55/125 (44%)
Query: 211 ITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRT-AEPX 269
++ EE +KK L+ + S + E I+ L V ++ +V + + + + ++
Sbjct: 72 LSFEEFEKKCDLLIDNFFLSNNIQEFIEDIKSLNVKIYNDYLVLQLIRKSFDKDDESQMN 131
Query: 270 XXXXXXXXXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGWLDAS 329
+ Q+ + F ++ SLDD+ LD P ++F + +I + +D +
Sbjct: 132 VSCLLNILNITKLITPEQVQRAFEKILLSLDDIKLDCPLCYDIFLKYLRFSILDNIIDKN 191
Query: 330 FMKSL 334
++ L
Sbjct: 192 YIFKL 196
Score = 50 (22.7 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 21 ESHIDRNDPNYDSGEEPYQLVGATISDPLDDYKKAVASIIEEYFSTGDVEV 71
+ ++D NDP YDS E ++ +Y + V + + F DV +
Sbjct: 23 KKYVDMNDPIYDSEIEDENCFYTVVNAEEIEYSQKVCDMKNKMFE--DVNI 71
>UNIPROTKB|E9PKF8 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9606 "Homo sapiens" [GO:0016070 "RNA metabolic
process" evidence=IEA] InterPro:IPR016021 InterPro:IPR016024
SUPFAM:SSF48371 GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891
Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 EMBL:AC116535
HGNC:HGNC:3297 ChiTaRS:EIF4G2 IPI:IPI00976571
ProteinModelPortal:E9PKF8 SMR:E9PKF8 PRIDE:E9PKF8
Ensembl:ENST00000531180 ArrayExpress:E9PKF8 Bgee:E9PKF8
Uniprot:E9PKF8
Length = 186
Score = 165 (63.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 45/128 (35%), Positives = 72/128 (56%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 46 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 105
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLN 464
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++LA L
Sbjct: 106 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELLAKLQ 165
Query: 465 LEEISSKL 472
E ++L
Sbjct: 166 DREWLTEL 173
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/115 (22%), Positives = 60/115 (52%)
Query: 50 DDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYH-PYFIKRLVSMAMDRHDKEKEMAS 108
++ K +++ EY ++G+ A + +RE+ + ++ P + +++ +++DR D++KE AS
Sbjct: 47 EELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKAS 106
Query: 109 VLLSALYAD-VISPDQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDIL 162
L+S L + + + D F+ +L+ F ARA++ ++L
Sbjct: 107 SLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELL 161
>RGD|1305294 [details] [associations]
symbol:Eif4g2 "eukaryotic translation initiation factor 4, gamma
2" species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006446 "regulation of translational initiation"
evidence=ISO] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISO] [GO:0016281 "eukaryotic translation
initiation factor 4F complex" evidence=ISO] InterPro:IPR003307
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 PROSITE:PS51363
SMART:SM00515 RGD:1305294 SUPFAM:SSF48371 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 HOGENOM:HOG000008096 IPI:IPI00948934 EMBL:BC091330
UniGene:Rn.103276 UniGene:Rn.121213 UniGene:Rn.232936
ProteinModelPortal:Q5BJU2 STRING:Q5BJU2 PRIDE:Q5BJU2
UCSC:RGD:1305294 HOVERGEN:HBG054984 InParanoid:Q5BJU2
ArrayExpress:Q5BJU2 Genevestigator:Q5BJU2 Uniprot:Q5BJU2
Length = 426
Score = 151 (58.2 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 41/119 (34%), Positives = 67/119 (56%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E VVT EY S + + + + ++ AP+ F P L KVI L++DR + +KE
Sbjct: 61 EELLKLTEAVVT---EYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKE 117
Query: 404 MASVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
AS L+S L E +T D + F+ +LE +DI + LA F ARA+I ++++
Sbjct: 118 KASSLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELVS 176
Score = 125 (49.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 27/115 (23%), Positives = 60/115 (52%)
Query: 50 DDYKKAVASIIEEYFSTGDVEVAASDLRELGSSEYH-PYFIKRLVSMAMDRHDKEKEMAS 108
++ K +++ EY ++G+ A S +RE+ + ++ P + +++ +++DR D++KE AS
Sbjct: 61 EELLKLTEAVVTEYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKAS 120
Query: 109 VLLSALYAD-VISPDQIRDGFVILLESXXXXXXXXXXXXXXXXXFVARAVVDDIL 162
L+S L + + + D F+ +LE F ARA++ +++
Sbjct: 121 SLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELV 175
Score = 37 (18.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 213 FQQSKVNMQKMLPEIDQNKDRMLEILE 239
>TAIR|locus:2174353 [details] [associations]
symbol:eIFiso4G1 "AT5G57870" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0006412 "translation" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR003890 InterPro:IPR016021
InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 GO:GO:0005829
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006417
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0009615 GO:GO:0003743
GO:GO:0016070 EMBL:AB013396 Gene3D:1.25.40.180 InterPro:IPR003891
Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 eggNOG:NOG301289
KO:K03260 EMBL:AY056266 EMBL:AY091258 EMBL:BT000467 EMBL:BT003424
EMBL:BT002056 IPI:IPI00536255 IPI:IPI00542840 RefSeq:NP_200595.2
RefSeq:NP_851207.1 UniGene:At.7654 HSSP:O43432
ProteinModelPortal:Q93ZT6 SMR:Q93ZT6 IntAct:Q93ZT6 STRING:Q93ZT6
PRIDE:Q93ZT6 EnsemblPlants:AT5G57870.1 GeneID:835897
KEGG:ath:AT5G57870 TAIR:At5g57870 HOGENOM:HOG000239254
InParanoid:Q93ZT6 OMA:TITEIHT PhylomeDB:Q93ZT6
ProtClustDB:CLSN2683018 Genevestigator:Q93ZT6 GO:GO:0046740
Uniprot:Q93ZT6
Length = 780
Score = 144 (55.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQEC 572
K LLEEY + ++ EA QC+ +LG+P ++ E VK+A+ +++EK + + LL+
Sbjct: 620 KTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLEYL 679
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
S+ ++ + GF LDD+ +D+P A F
Sbjct: 680 LSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNF 715
Score = 142 (55.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 43/147 (29%), Positives = 66/147 (44%)
Query: 201 VERRWGGSTHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLA 260
VE+ ++ E +++K LL EY EA +C+ ELG+ +H E VK A+ L+
Sbjct: 602 VEKPQPSGPKLSEEVLQRKTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLS 661
Query: 261 MEIR--TAEPXXXXXXXXXXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVP 318
+E EP + + GF LDD+ +D+P A N F IV
Sbjct: 662 LEKSPPVVEPIATLLEYLLSKKVV-APKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVG 720
Query: 319 VAISEGWLDASFMKSL-G--EDGRVQQ 342
I G +D ++ + G ED R Q+
Sbjct: 721 KLILAGGVDFKLVREIIGKMEDDRFQK 747
Score = 124 (48.7 bits), Expect = 0.00043, P = 0.00043
Identities = 35/156 (22%), Positives = 78/156 (50%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREKEM 404
E+V + K + +++ EYF + E ++ +E+LG P ++P F+K+ I+L++++ E
Sbjct: 614 EEVLQRKTK--SLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEP 671
Query: 405 ASVLLS-ALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPL 463
+ LL L ++ + +D+ GF++ +D +D+ A N + + ++ +
Sbjct: 672 IATLLEYLLSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVGKLILAGGVDFK 731
Query: 464 NLEEISSKLPPNCSGSETVRVARSLIAARHAGERLL 499
+ EI K+ + V A ++ + G+ LL
Sbjct: 732 LVREIIGKMEDDRFQKMVVDAAVRIVESSEQGKSLL 767
Score = 49 (22.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 311 NLFQSIVPVAISEGWLDASFMKSLGEDGRVQQEDEKVKRYKEEVVTIIHEYFLSDDI 367
+L S +P+ G AS G D R E+VK +E+++ + LSD+I
Sbjct: 35 SLSSSDLPLLRPHGGAPASSFPFKGGDSRFDGR-ERVKYTREQLLELKETTQLSDEI 90
>TAIR|locus:2131919 [details] [associations]
symbol:AT4G30680 "AT4G30680" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016021
InterPro:IPR016024 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 GO:GO:0003743 GO:GO:0016070 EMBL:AL161577
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 EMBL:AL109787 IPI:IPI00531845 PIR:A85359
RefSeq:NP_194797.1 UniGene:At.28762 ProteinModelPortal:Q9SUH8
SMR:Q9SUH8 STRING:Q9SUH8 PaxDb:Q9SUH8 EnsemblPlants:AT4G30680.1
GeneID:829191 KEGG:ath:AT4G30680 TAIR:At4g30680 eggNOG:NOG329388
InParanoid:Q9SUH8 PhylomeDB:Q9SUH8 ArrayExpress:Q9SUH8
Genevestigator:Q9SUH8 Uniprot:Q9SUH8
Length = 263
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQEC 572
K LLEEY + ++ EA QCI +L P ++ E+VK+A+ + +EK + + LL+
Sbjct: 107 KTNSLLEEYFNVRLLDEALQCIEELKTPSYHPELVKEAISLGLEKNPPCVEPVAKLLEHL 166
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
S+ ++T + G LDD+ +D+P A F
Sbjct: 167 VSKNVLTPKDLRNGCLLYGSMLDDIGIDLPKAPNNF 202
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 42/166 (25%), Positives = 69/166 (41%)
Query: 208 STHITVEEVKKKIADLLREYVESGDAFEACRCIRELGVSFFHHEVVKRALVLAMEIRT-- 265
+T + E+ +K LL EY EA +CI EL +H E+VK A+ L +E
Sbjct: 96 TTSLNTVELSRKTNSLLEEYFNVRLLDEALQCIEELKTPSYHPELVKEAISLGLEKNPPC 155
Query: 266 AEPXXXXXXXXXXXXXXXSSSQMAKGFARLEESLDDLALDIPSARNLFQSIVPVAISEGW 325
EP + + G LDD+ +D+P A N F I+ +
Sbjct: 156 VEPVAKLLEHLVSKNVL-TPKDLRNGCLLYGSMLDDIGIDLPKAPNNFGEILGSLVMAKA 214
Query: 326 LDASFMKSLGEDGRVQQEDEKVKR-YKEEVVTIIHEYFLSDDIPEL 370
D+ +K + ++ DE K+ E V+ + E L+ + E+
Sbjct: 215 SDSELVKEI----LMKMGDEWFKKAVLEAVMRSVSESLLTTEAVEV 256
>UNIPROTKB|H0Y3P2 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016070
"RNA metabolic process" evidence=IEA] InterPro:IPR003307
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363 SMART:SM00515
SMART:SM00543 SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 EMBL:AC116535 HGNC:HGNC:3297
ChiTaRS:EIF4G2 ProteinModelPortal:H0Y3P2 SMR:H0Y3P2 PRIDE:H0Y3P2
Ensembl:ENST00000396525 Bgee:H0Y3P2 Uniprot:H0Y3P2
Length = 869
Score = 154 (59.3 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 503 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 562
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 563 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 619
Score = 42 (19.8 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 656 FQQSKVNMQKMLPEIDQNKDRMLEILE 682
>UNIPROTKB|F2Z4C6 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543 GO:GO:0005737
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 GeneTree:ENSGT00530000063038 IPI:IPI00867192
EMBL:DAAA02040707 OMA:RCQAAKV ProteinModelPortal:F2Z4C6 SMR:F2Z4C6
Ensembl:ENSBTAT00000055320 ArrayExpress:F2Z4C6 Uniprot:F2Z4C6
Length = 907
Score = 154 (59.3 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 694 FQQSKVNMQKMLPEIDQNKDRMLEILE 720
>UNIPROTKB|Q95L46 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9913 "Bos taurus" [GO:0006446 "regulation of
translational initiation" evidence=ISS] [GO:0008135 "translation
factor activity, nucleic acid binding" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0006446 GO:GO:0016281 GO:GO:0003743
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 eggNOG:NOG301289 KO:K03260
EMBL:BC122631 EMBL:AF420315 EMBL:AF011353 IPI:IPI00867192
RefSeq:NP_001093329.1 UniGene:Bt.5471 ProteinModelPortal:Q95L46
SMR:Q95L46 STRING:Q95L46 PRIDE:Q95L46 GeneID:286870 KEGG:bta:286870
CTD:1982 HOGENOM:HOG000008096 HOVERGEN:HBG052084 NextBio:20806519
Uniprot:Q95L46
Length = 907
Score = 154 (59.3 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 694 FQQSKVNMQKMLPEIDQNKDRMLEILE 720
>UNIPROTKB|D3DQV9 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003307
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363 SMART:SM00515
SMART:SM00543 GO:GO:0005737 EMBL:CH471064 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0003743 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
OrthoDB:EOG4SBDXB EMBL:AC116535 IPI:IPI01022651 UniGene:Hs.183684
HGNC:HGNC:3297 ChiTaRS:EIF4G2 SMR:D3DQV9 Ensembl:ENST00000525681
Ensembl:ENST00000526148 UCSC:uc009ygf.3 Uniprot:D3DQV9
Length = 907
Score = 154 (59.3 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 694 FQQSKVNMQKMLPEIDQNKDRMLEILE 720
>UNIPROTKB|P78344 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IDA] [GO:0003743 "translation initiation factor activity"
evidence=IDA] [GO:0006446 "regulation of translational initiation"
evidence=IDA] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008219 "cell death" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003307 InterPro:IPR003890 InterPro:IPR016021
InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363
SMART:SM00515 SMART:SM00543 GO:GO:0005829 Reactome:REACT_6900
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0006446 GO:GO:0016281
GO:GO:0008219 GO:GO:0019221 GO:GO:0007050 GO:GO:0003743
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 eggNOG:NOG301289 KO:K03260 CTD:1982
HOVERGEN:HBG052084 OrthoDB:EOG4SBDXB EMBL:U73824 EMBL:U76111
EMBL:X89713 EMBL:AK223548 EMBL:AC116535 EMBL:BC014930 EMBL:BC018746
EMBL:BC018975 EMBL:BC039851 EMBL:BC043149 EMBL:BC111415
EMBL:BC111548 EMBL:AB063323 IPI:IPI00782985 IPI:IPI01022651
RefSeq:NP_001036024.3 RefSeq:NP_001166176.1 RefSeq:NP_001409.3
UniGene:Hs.183684 PDB:3D3M PDB:3L6A PDBsum:3D3M PDBsum:3L6A
ProteinModelPortal:P78344 SMR:P78344 IntAct:P78344
MINT:MINT-1182471 STRING:P78344 PhosphoSite:P78344 DMDM:30315906
PaxDb:P78344 PRIDE:P78344 Ensembl:ENST00000339995 GeneID:1982
KEGG:hsa:1982 UCSC:uc001mjb.3 UCSC:uc001mjd.3 GeneCards:GC11M010775
HGNC:HGNC:3297 HPA:CAB005163 HPA:HPA006773 HPA:HPA016965 MIM:602325
neXtProt:NX_P78344 PharmGKB:PA27723 InParanoid:P78344
ChiTaRS:EIF4G2 EvolutionaryTrace:P78344 GenomeRNAi:1982
NextBio:8025 PMAP-CutDB:P78344 ArrayExpress:P78344 Bgee:P78344
CleanEx:HS_EIF4G2 Genevestigator:P78344 GermOnline:ENSG00000110321
Uniprot:P78344
Length = 907
Score = 154 (59.3 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 694 FQQSKVNMQKMLPEIDQNKDRMLEILE 720
>UNIPROTKB|P79398 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9986 "Oryctolagus cuniculus" [GO:0003743
"translation initiation factor activity" evidence=ISS;IDA]
[GO:0006446 "regulation of translational initiation"
evidence=ISS;IDA] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] [GO:0016281 "eukaryotic translation
initiation factor 4F complex" evidence=ISS] InterPro:IPR003307
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363 SMART:SM00515
SMART:SM00543 SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0006446
GO:GO:0016281 GO:GO:0003743 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
eggNOG:NOG301289 CTD:1982 HOGENOM:HOG000008096 HOVERGEN:HBG052084
OrthoDB:EOG4SBDXB EMBL:U76113 RefSeq:NP_001075848.1
UniGene:Ocu.6219 ProteinModelPortal:P79398 STRING:P79398
GeneID:100009236 Uniprot:P79398
Length = 907
Score = 154 (59.3 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + ++++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVKEMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIGTSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 694 FQQSKVNMQKMLPEIDQNKDRMLEILE 720
>UNIPROTKB|Q5R7J9 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9601 "Pongo abelii" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006446 "regulation
of translational initiation" evidence=ISS] [GO:0008135 "translation
factor activity, nucleic acid binding" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR003307 InterPro:IPR003890 InterPro:IPR016021
InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363
SMART:SM00515 SMART:SM00543 SUPFAM:SSF48371 GO:GO:0003677
GO:GO:0006446 GO:GO:0016281 GO:GO:0003743 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 HSSP:O43432 HOGENOM:HOG000008096 HOVERGEN:HBG052084
EMBL:CR858801 EMBL:CR860116 UniGene:Pab.17999 UniGene:Pab.19783
ProteinModelPortal:Q5R7J9 SMR:Q5R7J9 PRIDE:Q5R7J9 InParanoid:Q5R7J9
Uniprot:Q5R7J9
Length = 907
Score = 154 (59.3 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 541 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 600
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 601 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 657
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 694 FQQSKVNMQKMLPEIDQNKDRMLEILE 720
>UNIPROTKB|F1S6V4 [details] [associations]
symbol:EIF4G2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003307 InterPro:IPR003890 InterPro:IPR016021
InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363
SMART:SM00515 SMART:SM00543 GO:GO:0005737 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
GeneTree:ENSGT00530000063038 OMA:RCQAAKV EMBL:CU606995
Ensembl:ENSSSCT00000014645 ArrayExpress:F1S6V4 Uniprot:F1S6V4
Length = 936
Score = 154 (59.3 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 570 KEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 629
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 630 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 686
Score = 42 (19.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 75 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 134
Query: 230 S 230
S
Sbjct: 135 S 135
Score = 37 (18.1 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 723 FQQSKVNMQKMLPEIDQNKDRMLEILE 749
>UNIPROTKB|F1PAH7 [details] [associations]
symbol:EIF4G2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
GeneTree:ENSGT00530000063038 EMBL:AAEX03012905
Ensembl:ENSCAFT00000037879 OMA:RCQAAKV Uniprot:F1PAH7
Length = 936
Score = 153 (58.9 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 351 KEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKEMA 405
KEE++ T++ EY S + E + + ++ AP+ F P L KVI L++DR + +KE A
Sbjct: 570 KEELLKLTETVVTEYLNSGNANEAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKA 629
Query: 406 SVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
S L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 630 SSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 686
Score = 42 (19.8 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 76 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 135
Query: 230 S 230
S
Sbjct: 136 S 136
Score = 37 (18.1 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 723 FQQSKVNMQKMLPEIDQNKDRMLEILE 749
>UNIPROTKB|F1LRX1 [details] [associations]
symbol:Eif4g2 "Protein Eif4g2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
IPI:IPI00948452 Ensembl:ENSRNOT00000067804 ArrayExpress:F1LRX1
Uniprot:F1LRX1
Length = 868
Score = 151 (58.2 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 41/119 (34%), Positives = 67/119 (56%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E VVT EY S + + + + ++ AP+ F P L KVI L++DR + +KE
Sbjct: 503 EELLKLTEAVVT---EYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKE 559
Query: 404 MASVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
AS L+S L E +T D + F+ +LE +DI + LA F ARA+I ++++
Sbjct: 560 KASSLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELVS 618
Score = 42 (19.8 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 655 FQQSKVNMQKMLPEIDQNKDRMLEILE 681
>UNIPROTKB|F1LN59 [details] [associations]
symbol:Eif4g2 "Protein Eif4g2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
GeneTree:ENSGT00530000063038 IPI:IPI00948934
Ensembl:ENSRNOT00000064535 ArrayExpress:F1LN59 Uniprot:F1LN59
Length = 906
Score = 151 (58.2 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 41/119 (34%), Positives = 67/119 (56%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E VVT EY S + + + + ++ AP+ F P L KVI L++DR + +KE
Sbjct: 541 EELLKLTEAVVT---EYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKE 597
Query: 404 MASVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
AS L+S L E +T D + F+ +LE +DI + LA F ARA+I ++++
Sbjct: 598 KASSLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELVS 656
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 693 FQQSKVNMQKMLPEIDQNKDRMLEILE 719
>UNIPROTKB|F1M6T9 [details] [associations]
symbol:Eif4g2 "Protein Eif4g2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543 GO:GO:0005737
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 IPI:IPI00366007 Ensembl:ENSRNOT00000023040
ArrayExpress:F1M6T9 Uniprot:F1M6T9
Length = 909
Score = 151 (58.2 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 41/119 (34%), Positives = 67/119 (56%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E VVT EY S + + + + ++ AP+ F P L KVI L++DR + +KE
Sbjct: 544 EELLKLTEAVVT---EYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKE 600
Query: 404 MASVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
AS L+S L E +T D + F+ +LE +DI + LA F ARA+I ++++
Sbjct: 601 KASSLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELVS 659
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 696 FQQSKVNMQKMLPEIDQNKDRMLEILE 722
>TAIR|locus:2061370 [details] [associations]
symbol:eIFiso4G2 "AT2G24050" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006412 "translation" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR003890 InterPro:IPR016021
InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 GO:GO:0005829
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0009615 GO:GO:0003743
GO:GO:0016070 Gene3D:1.25.40.180 EMBL:AC005170 InterPro:IPR003891
Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 KO:K03260 HSSP:O43432
HOGENOM:HOG000239254 ProtClustDB:CLSN2683018 GO:GO:0046740
EMBL:AY062494 EMBL:BT002087 IPI:IPI00537308 PIR:A84632
RefSeq:NP_179983.1 UniGene:At.12924 ProteinModelPortal:O82233
SMR:O82233 STRING:O82233 PRIDE:O82233 EnsemblPlants:AT2G24050.1
GeneID:816939 KEGG:ath:AT2G24050 TAIR:At2g24050 eggNOG:NOG311593
InParanoid:O82233 OMA:IFENAIL PhylomeDB:O82233
Genevestigator:O82233 Uniprot:O82233
Length = 747
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKN---DRMLDLLQEC 572
K LLEEY S +V EA QC+ +L P ++ E+VK+ + + +EK + + LL+
Sbjct: 586 KTKSLLEEYFSIRLVDEALQCVEELKSPSYHPELVKETISLGLEKNPPLVEPIAKLLKHL 645
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
S+ ++T+ + G LDD+ +D+P A F
Sbjct: 646 ISKNVLTSKDLGAGCLLYGSMLDDIGIDLPKAPNSF 681
>MGI|MGI:109207 [details] [associations]
symbol:Eif4g2 "eukaryotic translation initiation factor 4,
gamma 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0006446 "regulation of translational
initiation" evidence=ISO;IDA] [GO:0008135 "translation factor
activity, nucleic acid binding" evidence=ISO] [GO:0016070 "RNA
metabolic process" evidence=IEA] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR003307 InterPro:IPR003890 InterPro:IPR016021
InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363
SMART:SM00515 SMART:SM00543 MGI:MGI:109207 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0006446 GO:GO:0016281 GO:GO:0003743
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 eggNOG:NOG301289 KO:K03260 CTD:1982
HOVERGEN:HBG052084 OrthoDB:EOG4SBDXB ChiTaRS:EIF4G2 EMBL:U76112
EMBL:U63323 EMBL:AK144309 EMBL:BC040391 EMBL:BC043034 EMBL:BC056387
EMBL:BC057673 EMBL:BC064810 EMBL:BC092521 IPI:IPI00126006
IPI:IPI00776162 RefSeq:NP_001035221.1 RefSeq:NP_038535.2
UniGene:Mm.185453 ProteinModelPortal:Q62448 SMR:Q62448
IntAct:Q62448 STRING:Q62448 PhosphoSite:Q62448 PaxDb:Q62448
PRIDE:Q62448 GeneID:13690 KEGG:mmu:13690 UCSC:uc009jfz.1
InParanoid:Q62448 NextBio:284458 Bgee:Q62448 Genevestigator:Q62448
GermOnline:ENSMUSG00000005610 Uniprot:Q62448
Length = 906
Score = 148 (57.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 40/119 (33%), Positives = 67/119 (56%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E VVT +Y S + + + + ++ AP+ F P L KVI L++DR + +KE
Sbjct: 541 EELLKLTEAVVT---DYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKE 597
Query: 404 MASVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
AS L+S L E +T D + F+ +LE +DI + LA F ARA+I ++++
Sbjct: 598 KASSLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIISELVS 656
Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 170 AKKTLPAASKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVE 229
A+K +PA S A S H + + G +T E+ K +LL VE
Sbjct: 47 AQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVE 106
Query: 230 S 230
S
Sbjct: 107 S 107
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 693 FQQSKVNMQKMLPEIDQNKDRMLEILE 719
>UNIPROTKB|F1NQU7 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016070
"RNA metabolic process" evidence=IEA] InterPro:IPR003307
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363 SMART:SM00515
SMART:SM00543 SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 GeneTree:ENSGT00530000063038
EMBL:AADN02030593 EMBL:AADN02030594 IPI:IPI00573057
Ensembl:ENSGALT00000008967 ArrayExpress:F1NQU7 Uniprot:F1NQU7
Length = 864
Score = 145 (56.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E VVT EY + + + + ++ ++ AP+ F P L KVI+ ++DR + +KE
Sbjct: 499 EELLKQTEAVVT---EYLNNGNANDAVNAVREMRAPKHFIPEMLSKVISQSLDRSDEDKE 555
Query: 404 MASVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
AS L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 556 KASTLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 614
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 651 FQQSKVNMQKMLPEIDQNKDRMLEILE 677
>UNIPROTKB|F1P4A7 [details] [associations]
symbol:EIF4G2 "Eukaryotic translation initiation factor 4
gamma 2" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016070
"RNA metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543 GO:GO:0005737
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 GeneTree:ENSGT00530000063038 OMA:RCQAAKV
EMBL:AADN02030593 EMBL:AADN02030594 IPI:IPI00818243
Ensembl:ENSGALT00000039859 ArrayExpress:F1P4A7 Uniprot:F1P4A7
Length = 902
Score = 145 (56.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 38/119 (31%), Positives = 68/119 (57%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E VVT EY + + + + ++ ++ AP+ F P L KVI+ ++DR + +KE
Sbjct: 537 EELLKQTEAVVT---EYLNNGNANDAVNAVREMRAPKHFIPEMLSKVISQSLDRSDEDKE 593
Query: 404 MASVLLSALHIEIFSTED-IVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
AS L+S L E +T D + F+ +L+ +DI + LA F ARA+I ++++
Sbjct: 594 KASTLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLVKSYLAQFAARAIISELVS 652
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 689 FQQSKVNMQKMLPEIDQNKDRMLEILE 715
>ZFIN|ZDB-GENE-030131-6550 [details] [associations]
symbol:eif4g2b "eukaryotic translation initiation
factor 4, gamma 2b" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IGI] InterPro:IPR003307
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02020 Pfam:PF02854 PROSITE:PS51363 SMART:SM00515
SMART:SM00543 ZFIN:ZDB-GENE-030131-6550 SUPFAM:SSF48371
GO:GO:0007498 GO:GO:0003677 GO:GO:0003723 GO:GO:0016070
Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 HOVERGEN:HBG052084 EMBL:AB096101 IPI:IPI00510996
UniGene:Dr.36043 ProteinModelPortal:Q5KTT6 STRING:Q5KTT6
InParanoid:Q5KTT6 ArrayExpress:Q5KTT6 Uniprot:Q5KTT6
Length = 898
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 35/123 (28%), Positives = 66/123 (53%)
Query: 345 EKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKVITLAMDRKNREKE 403
E++ + E +VT EY + ++ + + ++ AP+ F P L K+I +++R + ++E
Sbjct: 534 EELLKMTENIVT---EYLNNRNMEVAVSGVREMKAPKHFLPEMLSKIILCSLERTDEDRE 590
Query: 404 MASVLLSALHIEIFST-EDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAP 462
AS L++ L E F T E + + +L+ +DI + LA F ARAVI ++++
Sbjct: 591 QASTLINTLRTEGFVTGEHFMQALLNVLDQCPKIEVDIPLVKSYLAQFAARAVIAELVSV 650
Query: 463 LNL 465
L
Sbjct: 651 AEL 653
>ZFIN|ZDB-GENE-030131-2173 [details] [associations]
symbol:eif4g2a "eukaryotic translation initiation
factor 4, gamma 2a" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=IGI] InterPro:IPR003307 InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02020 Pfam:PF02854
PROSITE:PS51363 SMART:SM00515 SMART:SM00543
ZFIN:ZDB-GENE-030131-2173 SUPFAM:SSF48371 GO:GO:0007498
GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
eggNOG:NOG301289 HOGENOM:HOG000008096 HOVERGEN:HBG052084
OrthoDB:EOG4SBDXB EMBL:AB096100 IPI:IPI00510166
RefSeq:NP_001014311.1 UniGene:Dr.29749 ProteinModelPortal:Q5KTT7
STRING:Q5KTT7 GeneID:323453 KEGG:dre:323453 CTD:323453
InParanoid:Q5KTT7 NextBio:20808256 ArrayExpress:Q5KTT7
Uniprot:Q5KTT7
Length = 891
Score = 136 (52.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 36/136 (26%), Positives = 76/136 (55%)
Query: 340 VQQEDEK-VKR---YKEEVV----TIIHEYFLSDDIPELIRSLEDLGAPE-FNPIFLKKV 390
+Q++ +K +K+ KEE++ T++ Y S ++ + + + ++ AP+ F P L K+
Sbjct: 511 IQEKPQKTIKKPPPAKEELLKMTETVVTSYLSSKNMNDAVNGVREMKAPKHFLPEMLSKM 570
Query: 391 ITLAMDRKNREKEMASVLLSALHIE-IFSTEDIVNGFVMLLESAEDTALDILDASNELAL 449
I +++ + ++E S L++ L +E + S E+ + F+ +L+ LD+ + LA
Sbjct: 571 IICSLENPDEDREHVSTLINKLRVEGLVSGENFLQAFLNVLDQCSKIELDVPLVKSYLAQ 630
Query: 450 FLARAVIDDVLAPLNL 465
F ARAVI ++++ L
Sbjct: 631 FAARAVIAELVSMAEL 646
Score = 37 (18.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 544 FFNHEVVKKALVMAMEKKNDRMLDLLQ 570
F +V + ++ +++ DRML++L+
Sbjct: 679 FQQSKVNMQKMLPEIDQNKDRMLEILE 705
>UNIPROTKB|E1BSG5 [details] [associations]
symbol:Gga.53666 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02854 SMART:SM00543 GO:GO:0005737 SUPFAM:SSF48371
GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
GeneTree:ENSGT00530000063038 EMBL:AADN02020695 EMBL:AADN02020696
EMBL:AADN02020697 IPI:IPI00603153 Ensembl:ENSGALT00000013878
Uniprot:E1BSG5
Length = 1431
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 60/248 (24%), Positives = 109/248 (43%)
Query: 343 EDEKVKRYKEEVVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKVITLAMDRKNREK 402
E+E K+ K II EY +D+ E ++ +++LG+P +F++ I ++R +
Sbjct: 1176 EEELEKKSK----AIIEEYLHINDMKEALQCVQELGSPSLLYVFVRNGIESTLERSTISR 1231
Query: 403 EMASVLLSAL-HIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLA 461
E VLL L S E G +LE AED +DI LA + ++ +
Sbjct: 1232 EHMGVLLCHLVKAGTLSKEQYYKGLREILEIAEDMEIDIPHIWLYLAELIT-PILQEEGI 1290
Query: 462 PLN--LEEISSKLPPNCSGSETVRVARSLIAARHAGERLLRCW-GGGTGWAVEDAKDK-I 517
P+ EI+ L P + + L+ + + + W GG W +D+ I
Sbjct: 1291 PMEELFREITKPLVPLGKATTLLVEVLGLLCKGMSQKTAGKLWRDGGLSWKEFLPEDQDI 1350
Query: 518 MKLLEEYE---SGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKND-RMLDLLQECF 573
K + E + + G S+ C ++L + E+ K+ + E N+ R+ D ++
Sbjct: 1351 NKFVTEQKLEYTMGDNSDTPSC-KELT----SEELCKQMDKLLKENSNNQRIYDWIEANL 1405
Query: 574 SEGLITTN 581
SE +++N
Sbjct: 1406 SEQQVSSN 1413
>UNIPROTKB|Q1MSJ2 [details] [associations]
symbol:eif(iso)4g "Putative eukaryotic translation
initiation factor 4 gamma" species:4538 "Oryza glaberrima"
[GO:0009615 "response to virus" evidence=IMP] [GO:0046740 "spread
of virus in host, cell to cell" evidence=IMP] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 GO:GO:0003677
GO:GO:0009615 GO:GO:0003743 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
GO:GO:0046740 EMBL:AM156959 ProteinModelPortal:Q1MSJ2
Gramene:Q1MSJ2 Uniprot:Q1MSJ2
Length = 790
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEK-KN--DRMLDLLQEC 572
K + LLEEY ++ EA QCI +L P + E+VK+A+ +A++K N D ++ LL+
Sbjct: 628 KTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHL 687
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
++ + T + G L+D+ +D+P A F
Sbjct: 688 HTKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALF 723
>UNIPROTKB|Q1MSJ0 [details] [associations]
symbol:eif(iso)4g "Putative eukaryotic translation
initiation factor 4 gamma" species:4538 "Oryza glaberrima"
[GO:0009615 "response to virus" evidence=IC] [GO:0046740 "spread of
virus in host, cell to cell" evidence=IC] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 GO:GO:0003677
GO:GO:0009615 GO:GO:0003743 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
GO:GO:0046740 EMBL:AM156961 ProteinModelPortal:Q1MSJ0
Gramene:Q1MSJ0 Uniprot:Q1MSJ0
Length = 793
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEK-KN--DRMLDLLQEC 572
K + LLEEY ++ EA QCI +L P + E+VK+A+ +A++K N D ++ LL+
Sbjct: 631 KTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHL 690
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
++ + T + G L+D+ +D+P A F
Sbjct: 691 HTKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALF 726
>UNIPROTKB|Q1MSJ1 [details] [associations]
symbol:eif(iso)4g "Putative eukaryotic translation
initiation factor 4 gamma" species:4538 "Oryza glaberrima"
[GO:0009615 "response to virus" evidence=IMP] [GO:0046740 "spread
of virus in host, cell to cell" evidence=IMP] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 GO:GO:0003677
GO:GO:0009615 GO:GO:0003743 GO:GO:0016070 Gene3D:1.25.40.180
InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
GO:GO:0046740 EMBL:AM156961 EMBL:AM156959 EMBL:FN432140
EMBL:AM156960 ProteinModelPortal:Q1MSJ1
EnsemblPlants:ORGLA04G0147000.1 EnsemblPlants:ORGLA11G0214100.1
Gramene:Q1MSJ1 Uniprot:Q1MSJ1
Length = 793
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEK-KN--DRMLDLLQEC 572
K + LLEEY ++ EA QCI +L P + E+VK+A+ +A++K N D ++ LL+
Sbjct: 631 KTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHL 690
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
++ + T + G L+D+ +D+P A F
Sbjct: 691 HTKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALF 726
>UNIPROTKB|Q1MSJ3 [details] [associations]
symbol:eif(iso)4g "Putative eukaryotic translation
initiation factor 4 gamma" species:39946 "Oryza sativa Indica
Group" [GO:0009615 "response to virus" evidence=IMP] [GO:0046740
"spread of virus in host, cell to cell" evidence=IMP]
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02854 SMART:SM00543 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0009615 GO:GO:0003743
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 HOGENOM:HOG000239254 GO:GO:0046740
EMBL:AM156958 ProteinModelPortal:Q1MSJ3 Gramene:Q1MSJ3
Uniprot:Q1MSJ3
Length = 793
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEK-KN--DRMLDLLQEC 572
K + LLEEY ++ EA QCI +L P + E+VK+A+ +A++K N D ++ LL+
Sbjct: 631 KTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHL 690
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
++ + T + G L+D+ +D+P A F
Sbjct: 691 HTKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALF 726
>UNIPROTKB|Q1MSJ4 [details] [associations]
symbol:eif(iso)4g "Putative eukaryotic translation
initiation factor 4 gamma" species:39946 "Oryza sativa Indica
Group" [GO:0009615 "response to virus" evidence=IMP] [GO:0046740
"spread of virus in host, cell to cell" evidence=IMP]
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02854 SMART:SM00543 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0009615 GO:GO:0003743
GO:GO:0016070 Gene3D:1.25.40.180 InterPro:IPR003891 Pfam:PF02847
SMART:SM00544 PROSITE:PS51366 GO:GO:0046740 EMBL:AM156957
ProteinModelPortal:Q1MSJ4 Gramene:Q1MSJ4 Uniprot:Q1MSJ4
Length = 793
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 516 KIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEK-KN--DRMLDLLQEC 572
K + LLEEY ++ EA QCI +L P + E+VK+A+ +A++K N D ++ LL+
Sbjct: 631 KTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHL 690
Query: 573 FSEGLITTNQMTKGFTRIKDGLDDLALDIPNAKEKF 608
++ + T + G L+D+ +D+P A F
Sbjct: 691 HTKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALF 726
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 640 608 0.00087 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 612 (65 KB)
Total size of DFA: 296 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.19u 0.24s 53.43t Elapsed: 00:00:03
Total cpu time: 53.20u 0.24s 53.44t Elapsed: 00:00:03
Start: Tue May 21 11:39:16 2013 End: Tue May 21 11:39:19 2013