BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006559
(640 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 22/231 (9%)
Query: 386 HSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKGL 445
H N++ +R +C E LVY Y+ + P+DW KR ++A SA+GL
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGL 152
Query: 446 AFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF-----HTPFFINDA--YNAP 498
A+LH + + H + ++NI++D+ A + D G+ +L H + + AP
Sbjct: 153 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAP 212
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA------KGDGELGIVKWVQMMGQ 552
E S K ++ DV+ +GV+LLE++TG+ A D ++ ++ WV+ + +
Sbjct: 213 EY-------LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 553 DESAWEVFDFELIMDKEMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIE 603
++ + D +L + + +EE+ P +RP MS V RM+E
Sbjct: 266 EKKLEALVDVDLQGNYK-DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 22/231 (9%)
Query: 386 HSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKGL 445
H N++ +R +C E LVY Y+ + P+DW KR ++A SA+GL
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGL 144
Query: 446 AFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF-----HTPFFIND--AYNAP 498
A+LH + + H + ++NI++D+ A + D G+ +L H + + AP
Sbjct: 145 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAP 204
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA------KGDGELGIVKWVQMMGQ 552
E S K ++ DV+ +GV+LLE++TG+ A D ++ ++ WV+ + +
Sbjct: 205 EY-------LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 553 DESAWEVFDFELIMDKEMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIE 603
++ + D +L + + +EE+ P +RP MS V RM+E
Sbjct: 258 EKKLEALVDVDLQGNYK-DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 375 DEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR 434
D+ ++V+ +H N+V + + + D+L LVY Y+P G P+ W+ R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMR 135
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV--------HQLFH 486
K+A +A G+ FLH + H H + S+NI++D+ A ISD G+ +
Sbjct: 136 CKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
+ AY APE + + + D+YSFGVVLLEI+TG
Sbjct: 193 SRIVGTTAYMAPEA--------LRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 375 DEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR 434
D+ ++V+ +H N+V + + + D+L LVY Y+P G P+ W+ R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMR 135
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV--------HQLFH 486
K+A +A G+ FLH + H H + S+NI++D+ A ISD G+ +
Sbjct: 136 CKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
AY APE + + + D+YSFGVVLLEI+TG
Sbjct: 193 XRIVGTTAYMAPEA--------LRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 375 DEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR 434
D+ ++V+ +H N+V + + + D+L LVY Y+P G P+ W+ R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMR 129
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV--------HQLFH 486
K+A +A G+ FLH + H H + S+NI++D+ A ISD G+ +
Sbjct: 130 CKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMX 186
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
AY APE + + + D+YSFGVVLLEI+TG
Sbjct: 187 XRIVGTTAYMAPEA--------LRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 375 DEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR 434
D+ ++V +H N+V + + + D+L LVY Y P G P+ W+ R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD--GTPPLSWHXR 126
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV--------HQLFH 486
K+A +A G+ FLH + H H + S+NI++D+ A ISD G+ +
Sbjct: 127 CKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX 183
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
+ AY APE + + + D+YSFGVVLLEI+TG
Sbjct: 184 SRIVGTTAYXAPEA--------LRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 385 RHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKG 444
RH ++VS+ +C+ ++E+ L+Y Y+ P M + W +RL++ +A+G
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQRLEICIGAARG 151
Query: 445 LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ------LFHTPFFINDAYNAP 498
L +LH + H + S NI++D+ I+D G+ + H +
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT---- 204
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG----ELGIVKWVQMMGQDE 554
L + + + + + ++ DVYSFGVVL E+L + A + + +W +
Sbjct: 205 -LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 555 SAWEVFDFELIMDKEMEEEMRXXXXXXXXXXXXXPKDRPNM 595
++ D L DK E +R +DRP+M
Sbjct: 264 QLEQIVDPNL-ADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 385 RHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKG 444
RH ++VS+ +C+ ++E+ L+Y Y+ P M + W +RL++ +A+G
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT-MSMSWEQRLEICIGAARG 151
Query: 445 LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ------LFHTPFFINDAYNAP 498
L +LH + H + S NI++D+ I+D G+ + H +
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT---- 204
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG----ELGIVKWVQMMGQDE 554
L + + + + + ++ DVYSFGVVL E+L + A + + +W +
Sbjct: 205 -LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 555 SAWEVFDFELIMDKEMEEEMRXXXXXXXXXXXXXPKDRPNM 595
++ D L DK E +R +DRP+M
Sbjct: 264 QLEQIVDPNL-ADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 33/243 (13%)
Query: 305 YGGARDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXX 364
+ GA DG D++ C+ + E +G G G ++
Sbjct: 23 FQGAMDGDDMD----IPWCDLNIK----------EKIGAGSFGTVHRAEWHGSDVAVKIL 68
Query: 365 XXXXXXXXXXDEWLR---VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXX 421
+E+LR ++ LRH NIV L +V +YL
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 422 XXPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV 481
R +D +RL +A D AKG+ +LH N + H +L S N++VD+ + D G+
Sbjct: 129 G--AREQLDERRRLSMAYDVAKGMNYLHNRNPP-IVHRNLKSPNLLVDKKYTVKVCDFGL 185
Query: 482 HQLFHTPFFINDA------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA 535
+L + F + + + APE+ + +N ++ DVYSFGV+L E+ T +
Sbjct: 186 SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN-------EKSDVYSFGVILWELATLQQP 238
Query: 536 KGD 538
G+
Sbjct: 239 WGN 241
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 33/243 (13%)
Query: 305 YGGARDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXX 364
+ GA DG D++ C+ + E +G G G ++
Sbjct: 23 FQGAMDGDDMD----IPWCDLNIK----------EKIGAGSFGTVHRAEWHGSDVAVKIL 68
Query: 365 XXXXXXXXXXDEWLR---VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXX 421
+E+LR ++ LRH NIV L +V +YL
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 422 XXPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV 481
R +D +RL +A D AKG+ +LH N + H L S N++VD+ + D G+
Sbjct: 129 G--AREQLDERRRLSMAYDVAKGMNYLHNRNPP-IVHRDLKSPNLLVDKKYTVKVCDFGL 185
Query: 482 HQLFHTPFFINDA------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA 535
+L + F + + APE+ + +N ++ DVYSFGV+L E+ T +
Sbjct: 186 SRLKASXFLXSKXAAGTPEWMAPEVLRDEPSN-------EKSDVYSFGVILWELATLQQP 238
Query: 536 KGD 538
G+
Sbjct: 239 WGN 241
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 10/191 (5%)
Query: 26 DISTLLSFKASVTGSSDSLSSWVNSTDPCFDSWRGVTC--NPSTHRVIKLVLEDLDLTGP 83
D LL K + G+ +LSSW+ +TD C +W GV C + T+RV L L L+L P
Sbjct: 7 DKQALLQIKKDL-GNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKP 65
Query: 84 AEVXXXXXXXXXXXXX-----XXXXXXXXXXXXXWPHLKHLYLSHNRFTGTFPSGVSSLR 138
+ L +LY++H +G P +S ++
Sbjct: 66 YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125
Query: 139 HLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNRFTGTLY-SVNSSSRSILDFNVSNN 197
L +D S+NA G +P NR +G + S S S+ +S N
Sbjct: 126 TLVTLDFSYNALSGTLP-PSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Query: 198 QLSGQIPAWMS 208
+L+G+IP +
Sbjct: 185 RLTGKIPPTFA 195
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 25/134 (18%)
Query: 119 LYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXD------ 172
+ +S NR TG P ++L +L VDLS N EG+ + +
Sbjct: 179 MTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 173 ----------------NRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAW--MSPFGGSS 214
NR GTL + + + NVS N L G+IP + F S+
Sbjct: 238 GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSA 297
Query: 215 FAGNKNLCGRPLPS 228
+A NK LCG PLP+
Sbjct: 298 YANNKCLCGSPLPA 311
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 115 HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIP 155
+L L L +NR GT P G++ L+ L +++S N GEIP
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
++ L+H NI+++R C + L LV ++ P + V+W A
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------A 111
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ------LGNAC--ISDIGVHQLFHTPFF 490
A+G+ +LH + H L SSNI++ Q L N I+D G+ + +H
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171
Query: 491 INDA----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
++ A + APE+ F + DV+S+GV+L E+LTG++
Sbjct: 172 MSAAGAYAWMAPEV-------IRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 114 PHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDN 173
P+L L L HN +G+ P V LR L +DLS N +G IP
Sbjct: 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM--------------- 700
Query: 174 RFTGTLYSVNSSSRSILDFNVSNNQLSGQIP--AWMSPFGGSSFAGNKNLCGRPLP 227
S+ + + ++SNN LSG IP F + F N LCG PLP
Sbjct: 701 ----------SALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP 746
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 115 HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNR 174
L L+LS N +GT PS + SL LR + L N EGEIP N
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF-ND 477
Query: 175 FTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWM 207
TG + S S+ ++ ++SNN+L+G+IP W+
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 116 LKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNRF 175
L+ L L N TG PSG+S+ +L + LS+N GEIP +N F
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP-KWIGRLENLAILKLSNNSF 526
Query: 176 TGTLYSVNSSSRSILDFNVSNNQLSGQIPAWM 207
+G + + RS++ +++ N +G IPA M
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 116 LKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNRF 175
L+HL +S N+ +G F +S+ L+ +++S N + G IP +N+F
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKF 281
Query: 176 TGTLYS-VNSSSRSILDFNVSNNQLSGQIPAWM 207
TG + ++ + ++ ++S N G +P +
Sbjct: 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 124 NRFTGTFP-SGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNRFTGTLYS- 181
N F+G P + +R L+ +DLS N + GE+P N F+G +
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 182 -VNSSSRSILDFNVSNNQLSGQIPAWMS 208
+ ++ + + NN +G+IP +S
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 115 HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIP 155
+L + LS+NR TG P + L +L + LS+N++ G IP
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 115 HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIP 155
+L L LS+N F+G P+ + R L +DL+ N + G IP
Sbjct: 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 114 PHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDN 173
P+L L L HN +G+ P V LR L +DLS N +G IP
Sbjct: 653 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM--------------- 697
Query: 174 RFTGTLYSVNSSSRSILDFNVSNNQLSGQIP--AWMSPFGGSSFAGNKNLCGRPLP 227
S+ + + ++SNN LSG IP F + F N LCG PLP
Sbjct: 698 ----------SALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP 743
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 115 HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNR 174
L L+LS N +GT PS + SL LR + L N EGEIP N
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF-ND 474
Query: 175 FTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWM 207
TG + S S+ ++ ++SNN+L+G+IP W+
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 507
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 116 LKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNRF 175
L+ L L N TG PSG+S+ +L + LS+N GEIP +N F
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP-KWIGRLENLAILKLSNNSF 523
Query: 176 TGTLYSVNSSSRSILDFNVSNNQLSGQIPAWM 207
+G + + RS++ +++ N +G IPA M
Sbjct: 524 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 116 LKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNRF 175
L+HL +S N+ +G F +S+ L+ +++S N + G IP +N+F
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKF 278
Query: 176 TGTLYS-VNSSSRSILDFNVSNNQLSGQIPAWM 207
TG + ++ + ++ ++S N G +P +
Sbjct: 279 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 311
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 124 NRFTGTFP-SGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDNRFTGTLYS- 181
N F+G P + +R L+ +DLS N + GE+P N F+G +
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 182 -VNSSSRSILDFNVSNNQLSGQIPAWMS 208
+ ++ + + NN +G+IP +S
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 115 HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIP 155
+L + LS+NR TG P + L +L + LS+N++ G IP
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 115 HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIP 155
+L L LS+N F+G P+ + R L +DL+ N + G IP
Sbjct: 512 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 35/215 (16%)
Query: 338 AELLGKGCVGATYKXXXXXXXXXXXXXXXXXXXXXXXDEWLR---VIGGLRHSNIVSIRA 394
E+LGKGC G K +L+ V+ L H N++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 395 YCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKGLAFLHGYNKA 454
L + +Y+ + P W++R+ A D A G+A+LH N
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMD--SQYP--WSQRVSFAKDIASGMAYLHSMN-- 128
Query: 455 HLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE-----LKFNNNNNYS 509
+ H L+S N +V + N ++D G+ +L + D PE K + Y+
Sbjct: 129 -IIHRDLNSHNCLVRENKNVVVADFGLARL------MVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 510 Q--------------RKFWQRCDVYSFGVVLLEIL 530
R + ++ DV+SFG+VL EI+
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRM----------PVDWNK 433
L+H +IV C L +V++Y+ ++ P+ +
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 159
Query: 434 RLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFIN 492
L +AS A G+ +L G H H L++ N +V Q I D G+ + ++ T ++
Sbjct: 160 LLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 216
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + RKF DV+SFGVVL EI T
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 384 LRHSNIVSIRAYCNGKD----ELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
LRH NI+ A N + +L+LV DY R V +KLA
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDY------HEHGSLFDYLNRYTVTVEGMIKLAL 146
Query: 440 DSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
+A GLA LH K + H L S NI+V + G CI+D+G+ + D
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
Query: 495 ----------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE+ +++ N + ++R D+Y+ G+V EI
Sbjct: 207 APNHRVGTKRYMAPEV-LDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 384 LRHSNIVSIRAYCNGKD----ELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
LRH NI+ A N + +L+LV DY R V +KLA
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDY------HEHGSLFDYLNRYTVTVEGMIKLAL 133
Query: 440 DSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
+A GLA LH K + H L S NI+V + G CI+D+G+ + D
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 193
Query: 495 ----------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE+ +++ N + ++R D+Y+ G+V EI
Sbjct: 194 APNHRVGTKRYMAPEV-LDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 384 LRHSNIVSIRAYCNGKD----ELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
LRH NI+ A N + +L+LV DY R V +KLA
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDY------HEHGSLFDYLNRYTVTVEGMIKLAL 113
Query: 440 DSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
+A GLA LH K + H L S NI+V + G CI+D+G+ + D
Sbjct: 114 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 173
Query: 495 ----------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE+ +++ N + ++R D+Y+ G+V EI
Sbjct: 174 APNHRVGTKRYMAPEV-LDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 384 LRHSNIVSIRAYCNGKD----ELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
LRH NI+ A N + +L+LV DY R V +KLA
Sbjct: 57 LRHENILGFIAADNKDNGTWTQLWLVSDY------HEHGSLFDYLNRYTVTVEGMIKLAL 110
Query: 440 DSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
+A GLA LH K + H L S NI+V + G CI+D+G+ + D
Sbjct: 111 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 170
Query: 495 ----------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE+ +++ N + ++R D+Y+ G+V EI
Sbjct: 171 APNHRVGTKRYMAPEV-LDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRM----------PVDWNK 433
L+H +IV C L +V++Y+ ++ P+ +
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 130
Query: 434 RLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFIN 492
L +AS A G+ +L G H H L++ N +V Q I D G+ + ++ T ++
Sbjct: 131 LLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 187
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + RKF DV+SFGVVL EI T
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRM----------PVDWNK 433
L+H +IV C L +V++Y+ ++ P+ +
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 136
Query: 434 RLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFIN 492
L +AS A G+ +L G H H L++ N +V Q I D G+ + ++ T ++
Sbjct: 137 LLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 193
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + RKF DV+SFGVVL EI T
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 384 LRHSNIVSIRAYCNGKD----ELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
LRH NI+ A N + +L+LV DY R V +KLA
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDY------HEHGSLFDYLNRYTVTVEGMIKLAL 107
Query: 440 DSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
+A GLA LH K + H L S NI+V + G CI+D+G+ + D
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
Query: 495 ----------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE+ +++ N + ++R D+Y+ G+V EI
Sbjct: 168 APNHRVGTKRYMAPEV-LDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 384 LRHSNIVSIRAYCNGKD----ELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
LRH NI+ A N + +L+LV DY R V +KLA
Sbjct: 55 LRHENILGFIAADNKDNGTWTQLWLVSDY------HEHGSLFDYLNRYTVTVEGMIKLAL 108
Query: 440 DSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
+A GLA LH K + H L S NI+V + G CI+D+G+ + D
Sbjct: 109 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 168
Query: 495 ----------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE+ +++ N + ++R D+Y+ G+V EI
Sbjct: 169 APNHRVGTKRYMAPEV-LDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 117
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF--HTPFFIND 493
+ S KG+ +L H L++ NI+V+ I D G+ ++ FF
Sbjct: 118 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK 174
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + + ++ KF DV+SFGVVL E+ T
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 118
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H +L++ NI+V+ I D G+ ++
Sbjct: 119 QYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVK 175
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 176 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR----- 434
++ L+H +IV C D L +V++Y+ + VD R
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 435 ------LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHT 487
L +AS A G+ +L H H L++ N +V I D G+ + ++ T
Sbjct: 130 LGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ + +++ + RKF DV+SFGV+L EI T
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 124
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 125 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 181
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 182 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 120
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 121 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 178 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 148
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 149 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 205
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 206 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 122
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 123 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 179
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 180 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 135
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 136 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 193 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 117
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 118 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 175 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 117
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 118 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 175 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 123
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 124 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 180
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 181 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 60 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 115
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 116 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 172
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 173 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN-----ACISDIGV- 481
P+ W+ +L+L D A G+ ++ N + H L S NI + L A ++D G+
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
Query: 482 HQLFHTP--FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
Q H+ N + APE +Y+++ D YSF ++L ILTG+ +
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEK-----ADTYSFAMILYTILTGEGPFDEY 231
Query: 540 ELGIVKWVQMMGQD 553
G +K++ M+ ++
Sbjct: 232 SYGKIKFINMIREE 245
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 121
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 122 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 178
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 179 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 116
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 117 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 173
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 174 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 57 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 112
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H +L ++NI+V + I+D G+ +L ++ Y A E
Sbjct: 113 QIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIE-----DNEYTARE 164
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 165 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP + +D K L
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLL 135
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 136 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 193 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ +YLP +D K L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER----IDHIKLL 120
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 121 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 178 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 66 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 121
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L ++ Y A E
Sbjct: 122 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-----DNEYTARE 173
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 174 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 67 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L ++ Y A E
Sbjct: 123 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-----DNEYTARE 174
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN-----ACISDIGV- 481
P+ W+ +L+L D A G+ ++ N + H L S NI + L A ++D G
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
Query: 482 HQLFHTP--FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
Q H+ N + APE +Y+++ D YSF ++L ILTG+ +
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEK-----ADTYSFAMILYTILTGEGPFDEY 231
Query: 540 ELGIVKWVQMMGQD 553
G +K++ M+ ++
Sbjct: 232 SYGKIKFINMIREE 245
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 71 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L ++ Y A E
Sbjct: 127 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-----DNEYTARE 178
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 179 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 61 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L ++ Y A E
Sbjct: 117 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-----DNEYTARE 168
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 56 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 111
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L ++ Y A E
Sbjct: 112 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-----DNEYTARE 163
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 164 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 380 VIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
++ L H +I+ + C G+ L LV +Y+P R + + L
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP------RHSIGLAQLLLF 122
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFINDA 494
A +G+A+LH H H +L++ N+++D I D G+ + H + + +
Sbjct: 123 AQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 495 YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++P + + KF+ DV+SFGV L E+LT
Sbjct: 180 GDSPVFWYAPEC-LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L+H NIV + C G+ L L+ ++LP + +D K L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH----KERIDHIKLL 120
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+ S KG+ +L H L++ NI+V+ I D G+ ++
Sbjct: 121 QYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + ++ KF DV+SFGVVL E+ T
Sbjct: 178 EPGESPIF----WYAPE-------SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 380 VIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
++ L H +I+ + C G+ L LV +Y+P R + + L
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP------RHSIGLAQLLLF 122
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFINDA 494
A +G+A+LH H H +L++ N+++D I D G+ + H + + +
Sbjct: 123 AQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 495 YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++P + + KF+ DV+SFGV L E+LT
Sbjct: 180 GDSPVFWYAPEC-LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 429 VDWNKRLKLASDSAKGLAFLH----GYNKAH---LFHGHLSSSNIVVDQLGNACISDIGV 481
V WN+ +A A+GLA+LH G H + H + S N+++ ACI+D G+
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 482 HQLFHTPFFINDA--------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
F D Y APE+ N+ QR + R D+Y+ G+VL E L +
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEV-LEGAINF-QRDAFLRIDMYAMGLVLWE-LASR 234
Query: 534 MAKGDG 539
DG
Sbjct: 235 CTAADG 240
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 76/217 (35%), Gaps = 31/217 (14%)
Query: 339 ELLGKGCVGATYKXXXXXXXXXXXXXXXXXXXXXXXDEWLRVIGGLRHSNIVSI-----R 393
EL+G+G GA YK ++ + + + H NI R
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDER 78
Query: 394 AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKGLAFLH---- 449
+G+ E LV +Y P DW +LA +GLA+LH
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHTELP 132
Query: 450 --GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------------- 494
+ K + H L+S N++V G ISD G+ +
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 495 -YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
Y APE+ N ++ D+Y+ G++ EI
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 377 WLRVIGGLR---HSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW 431
W R I LR H +IV + C G+ + LV +Y+P R V
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP------RHCVGL 111
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTP 488
+ L A +G+A+LH H H L++ N+++D I D G+ + H
Sbjct: 112 AQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + + ++P + + KF+ DV+SFGV L E+LT
Sbjct: 169 YRVREDGDSPVFWYAPEC-LKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 377 WLRVIGGLR---HSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW 431
W R I LR H +IV + C G+ + LV +Y+P R V
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP------RHCVGL 110
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTP 488
+ L A +G+A+LH H H L++ N+++D I D G+ + H
Sbjct: 111 AQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + + ++P + + KF+ DV+SFGV L E+LT
Sbjct: 168 YRVREDGDSPVFWYAPEC-LKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L H NIV + C +G + + L+ ++LP + ++ ++L
Sbjct: 74 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK----NKNKINLKQQL 129
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---PFFIN 492
K A KG+ +L H L++ N++V+ I D G+ + T +
Sbjct: 130 KYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
D ++P + Q KF+ DV+SFGV L E+LT
Sbjct: 187 DDRDSPVFWYAPEC-LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 15/157 (9%)
Query: 380 VIGGLRHSNIVSIRAYCN--GKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
++ L H +I+ + C G L LV +Y+P R + + L
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP------RHSIGLAQLLLF 139
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFINDA 494
A +G+A+LH H H L++ N+++D I D G+ + H + + +
Sbjct: 140 AQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRED 196
Query: 495 YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++P + + KF+ DV+SFGV L E+LT
Sbjct: 197 GDSPVFWYAPEC-LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN-----ACISDIGV- 481
P+ W+ +L+L D A G+ ++ N + H L S NI + L A ++D +
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
Query: 482 HQLFHTP--FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
Q H+ N + APE +Y+++ D YSF ++L ILTG+ +
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEK-----ADTYSFAMILYTILTGEGPFDEY 231
Query: 540 ELGIVKWVQMMGQD 553
G +K++ M+ ++
Sbjct: 232 SYGKIKFINMIREE 245
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 378 LRVIGGLRHSNIVSIRAYC--NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
+ ++ L H NIV + C +G + + L+ ++LP + ++ ++L
Sbjct: 62 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK----NKNKINLKQQL 117
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---PFFIN 492
K A KG+ +L H L++ N++V+ I D G+ + T +
Sbjct: 118 KYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
D ++P + Q KF+ DV+SFGV L E+LT
Sbjct: 175 DDRDSPVFWYAPEC-LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIR--AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
++++ L IV R +Y G+ EL LV +YLP R +D ++ L
Sbjct: 59 IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRH----RARLDASRLL 114
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---------- 485
+S KG+ +L H L++ NI+V+ + I+D G+ +L
Sbjct: 115 LYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR 171
Query: 486 ---HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+P F + APE + S F ++ DV+SFGVVL E+ T
Sbjct: 172 EPGQSPIF----WYAPE-------SLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 61 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L
Sbjct: 117 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 380 VIGGLRHSNIVSIR-AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
V+ LRHSN+V + K L++V +Y+ GR + + LK +
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFS 295
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L G N H L++ N++V + A +SD G+ + + D P
Sbjct: 296 LDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLP 349
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
+K+ ++KF + DV+SFG++L EI
Sbjct: 350 -VKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 380 VIGGLRHSNIVSIR-AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
V+ LRHSN+V + K L++V +Y+ GR + + LK +
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFS 123
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L G N H L++ N++V + A +SD G+ + + D P
Sbjct: 124 LDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLP 177
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
+K+ ++KF + DV+SFG++L EI
Sbjct: 178 -VKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 380 VIGGLRHSNIVSIR-AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
V+ LRHSN+V + K L++V +Y+ GR + + LK +
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFS 108
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L G N H L++ N++V + A +SD G+ + + D P
Sbjct: 109 LDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLP 162
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
+K+ ++KF + DV+SFG++L EI
Sbjct: 163 -VKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
VD ++ +K A D A+G+AFLH H L+S ++++D+ A IS V F +P
Sbjct: 108 VDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDEDMTARISMADVKFSFQSP 166
Query: 489 -FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGD 538
A+ APE + ++R D++SF V+L E++T ++ D
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRS----ADMWSFAVLLWELVTREVPFAD 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 21/179 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
++++ LRH N+V++ C K +LV++++ +D+ K
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKY 129
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA--- 494
G+ F H +N + H + NI+V Q G + D G + P + D
Sbjct: 130 LFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 495 ---YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGELGIVKWVQM 549
Y APEL + K+ + DV++ G ++ E+ G+ + GD ++ + + M
Sbjct: 187 TRWYRAPELLVGD------VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMM 239
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 378 LRVIGGLRHSNIVSIR--AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
++++ L IV R +Y G+ L LV +YLP R +D ++ L
Sbjct: 63 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH----RARLDASRLL 118
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---FFIN 492
+S KG+ +L H L++ NI+V+ + I+D G+ +L + +
Sbjct: 119 LYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 175
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +P + + + S F ++ DV+SFGVVL E+ T
Sbjct: 176 EPGQSP-IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 69 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L
Sbjct: 125 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 182 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 378 LRVIGGLRHSNIVSIR--AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
++++ L IV R +Y G+ L LV +YLP R +D ++ L
Sbjct: 62 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH----RARLDASRLL 117
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---FFIN 492
+S KG+ +L H L++ NI+V+ + I+D G+ +L + +
Sbjct: 118 LYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 174
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +P + + + S F ++ DV+SFGVVL E+ T
Sbjct: 175 EPGQSP-IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 62 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 117
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L
Sbjct: 118 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 378 LRVIGGLRHSNIVSIR--AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
++++ L IV R +Y G+ L LV +YLP R +D ++ L
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH----RARLDASRLL 130
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---FFIN 492
+S KG+ +L H L++ NI+V+ + I+D G+ +L + +
Sbjct: 131 LYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +P + + + S F ++ DV+SFGVVL E+ T
Sbjct: 188 EPGQSP-IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 67 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L
Sbjct: 123 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 63 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L ++ A E
Sbjct: 119 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-----DNEXTARE 170
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 171 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 61 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L
Sbjct: 117 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 70 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 125
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L ++ A E
Sbjct: 126 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE-----DNEXTARE 177
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 178 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ P + + NK L +A+
Sbjct: 61 LMKQLQHQRLVRLYAVVT-QEPIYIITEYM---ENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V + I+D G+ +L
Sbjct: 117 QIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 36/170 (21%)
Query: 384 LRHSNIVS-IRAYCNGK---DELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
+RH NI+ I A G +L+L+ DY +D LKLA
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT------LDAKSMLKLAY 141
Query: 440 DSAKGLAFLHG-----YNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
S GL LH K + H L S NI+V + G CI+D+G+ FI+D
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-----AVKFISDT 196
Query: 495 ---------------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y PE+ + + N + + + D+YSFG++L E+
Sbjct: 197 NEVDIPPNTRVGTKRYMPPEV-LDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 36 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 93
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 94 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 152
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 153 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 207
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 208 AKQLVRGEPNVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 261
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 262 PGDSGVDQLVEIIKVLG 278
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 26 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 83
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 84 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 142
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 143 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 197
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 198 AKQLVRGEPNVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 251
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 252 PGDSGVDQLVEIIKVLG 268
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 120 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 173 TLWYRAPEILLGX------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 227 LGTPDEVVW 235
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 114 ----LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 167 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 221 LGTPDEVVW 229
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 116 ----LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 169 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 223 LGTPDEVVW 231
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 32 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 89
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 90 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 149 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 204 AKQLVRGEPNVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 257
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 258 PGDSGVDQLVEIIKVLG 274
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGX------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 34 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 91
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 92 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 150
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 151 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 205
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 206 AKQLVRGEPNVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 259
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 260 PGDSGVDQLVEIIKVLG 276
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 77 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 134
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 135 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 193
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 194 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 248
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 249 AKQLVRGEPNVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 302
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 303 PGDSGVDQLVEIIKVLG 319
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 11 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 68
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 69 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 127
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 128 AKQTLPVIYVKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 182
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 183 AKQLVRGEPNVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 236
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 237 PGDSGVDQLVEIIKVLG 253
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 116 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 169 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 223 LGTPDEVVW 231
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ RH NI+ Y K +L +V + M K + +A
Sbjct: 73 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEM----KKLIDIAR 127
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------HQLFHTPF 489
+A+G+ +LH + + H L S+NI + + I D G+ HQ
Sbjct: 128 QTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 490 FINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
I + APE ++ ++N YS + DVY+FG+VL E++TG++
Sbjct: 185 SI--LWMAPEVIRMQDSNPYSFQ-----SDVYAFGIVLYELMTGQL 223
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 116 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 169 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 223 LGTPDEVVW 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 115 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 168 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 222 LGTPDEVVW 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 120
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L D Y AP
Sbjct: 121 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAPA 172
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 119
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L D Y AP
Sbjct: 120 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAPA 171
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 117 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGELG-IVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 170 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 223
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 224 LGTPDEVVW 232
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 114 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 167 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 221 LGTPDEVVW 229
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ RH NI+ Y K +L +V + M K + +A
Sbjct: 61 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEM----KKLIDIAR 115
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------HQLFHTPF 489
+A+G+ +LH + + H L S+NI + + I D G+ HQ
Sbjct: 116 QTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 490 FINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
I + APE ++ ++N YS + DVY+FG+VL E++TG++
Sbjct: 173 SI--LWMAPEVIRMQDSNPYSFQ-----SDVYAFGIVLYELMTGQL 211
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + ++V +Y+P R V L +A+
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLREC---NREEVTAVVLLYMAT 137
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 138 QISSAMEYL---EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + F + DV++FGV+L EI T M+ G
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 116 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 169 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 223 LGTPDEVVW 231
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 115 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 168 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 222 LGTPDEVVW 230
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 116 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 169 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 223 LGTPDEVVW 231
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 107/240 (44%), Gaps = 21/240 (8%)
Query: 375 DEWLR---VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW 431
+E+L+ V+ ++H N+V + C + +++ +++ R V+
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNA 356
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFI 491
L +A+ + + +L K + H +L++ N +V + ++D G+ +L +
Sbjct: 357 VVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMG 551
A +K+ + + KF + DV++FGV+L EI T M+ G + + + +++
Sbjct: 414 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE 472
Query: 552 QDESAWEVFDFELIMDKEMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+D + + E +K + E MR P DRP+ + +H+ E + + SI
Sbjct: 473 KD---YRMERPEGCPEK-VYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 521
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 115 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 168 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 222 LGTPDEVVW 230
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 114 ----LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 167 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 221 LGTPDEVVW 229
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 112 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 165 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 219 LGTPDEVVW 227
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 112 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 165 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 219 LGTPDEVVW 227
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 120 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 173 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 227 LGTPDEVVW 235
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 117 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 170 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 223
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 224 LGTPDEVVW 232
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 115 ----LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 168 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 222 LGTPDEVVW 230
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 112 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 165 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 219 LGTPDEVVW 227
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPX------XXXXXXXXXXXXPGRMPVDW-- 431
++ L+H +IV C D L +V++Y+ G P +
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFF 490
++ L +A A G+ +L H H L++ N +V + I D G+ + ++ T ++
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +++ + RKF DV+S GVVL EI T
Sbjct: 185 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 112 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 165 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 219 LGTPDEVVW 227
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 114 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 167 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 221 LGTPDEVVW 229
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 112 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 165 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 219 LGTPDEVVW 227
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 114 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 167 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 221 LGTPDEVVW 229
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 102/232 (43%), Gaps = 18/232 (7%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 322
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H +L++ N +V + ++D G+ +L + A
Sbjct: 323 QISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559
+K+ + + KF + DV++FGV+L EI T M+ G + + + +++ +D + +
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEKD---YRM 435
Query: 560 FDFELIMDKEMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
E +K + E MR P DRP+ + +H+ E + + SI
Sbjct: 436 ERPEGCPEK-VYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 479
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PG P+ ++L +A A G+A+L ++ H L++ N +V + I+D G+ +
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG 542
++ ++ D +A +++ + ++ DV+++GVVL EI + + G
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG--- 279
Query: 543 IVKWVQMMGQDESAWEVFDFELIM-----DKEMEEEMRXXXXXXXXXXXXXPKDRPNMSI 597
M +E + V D ++ E+ MR P DRP+
Sbjct: 280 -------MAHEEVIYYVRDGNILACPENCPLELYNLMR-------LCWSKLPADRPSFCS 325
Query: 598 VHRMIEDI--RTKGSI 611
+HR+++ + R +G++
Sbjct: 326 IHRILQRMCERAEGTV 341
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 21/116 (18%)
Query: 430 DWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-------- 481
+ K + +A +A+G+ +LH + + H L S+NI + + I D G+
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 482 --HQLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
HQ I + APE ++ ++N YS + DVY+FG+VL E++TG++
Sbjct: 175 GSHQFEQLSGSI--LWMAPEVIRMQDSNPYSFQ-----SDVYAFGIVLYELMTGQL 223
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGELG-IVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 18/232 (7%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 325
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H +L++ N +V + ++D G+ +L + A
Sbjct: 326 QISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559
+K+ + + KF + DV++FGV+L EI T M+ G + + + +++ +D + +
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEKD---YRM 438
Query: 560 FDFELIMDKEMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
E +K + E MR P DRP+ + +H+ E + + SI
Sbjct: 439 ERPEGCPEK-VYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 482
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 96/238 (40%), Gaps = 30/238 (12%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 116
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L F A
Sbjct: 117 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559
+K+ + + KF + DV++FGV+L EI T M+ G +E+
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-----------IDPSQVYEL 222
Query: 560 FDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 223 LEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
VD ++ +K A D A+G AFLH H L+S ++ +D+ A IS V F +P
Sbjct: 108 VDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNSRSVXIDEDXTARISXADVKFSFQSP 166
Query: 489 -FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGD 538
A+ APE + ++R D +SF V+L E++T ++ D
Sbjct: 167 GRXYAPAWVAPEALQKKPEDTNRRS----ADXWSFAVLLWELVTREVPFAD 213
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 32 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 89
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 90 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 149 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 204 AKQLVRGEPNVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 257
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 258 PGDSGVDQLVEIIKVLG 274
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 380 VIGGLRHSNIVSIR-AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
V+ LRHSN+V + K L++V +Y+ GR + + LK +
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFS 114
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L G N H L++ N++V + A +SD G+ + + D P
Sbjct: 115 LDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLP 168
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
+K+ + F + DV+SFG++L EI
Sbjct: 169 -VKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV+++L +P+ + +L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GL+F H + + H L N++++ G ++D G+ + F P +
Sbjct: 113 ----LQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 166 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 220 LGTPDEVVW 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 69 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 128
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 129 VKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 183
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 184 NVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 237
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 238 VEIIKVLG 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 17 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 74
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 75 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 133
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 134 AKQTLPVIYVKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 188
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 189 AKQLVRGEPNVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 242
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 243 PGDSGVDQLVEIIKVLG 259
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 6 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 63
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 64 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 122
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 123 AKQTLPVIYVKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 177
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 178 AKQLVRGEPNVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 231
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 232 PGDSGVDQLVEIIKVLG 248
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 435 LKLASDSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---- 485
L++ A GLA LH K + H L S NI+V + G CI+D+G+ +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 486 ------HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+ P Y APE+ + ++R D+++FG+VL E+ ++ G
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
Query: 540 E 540
E
Sbjct: 227 E 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 10 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 67
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 68 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 127 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 181
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 182 AKQLVRGEPNVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 235
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 236 PGDSGVDQLVEIIKVLG 252
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L+H NIV + + +++L LV++++ ++ N
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N+++++ G + D G+ + F P +
Sbjct: 114 QWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGELGIVKWV-QM 549
Y AP++ + R + D++S G +L E++TGK + G + +K + +
Sbjct: 171 TLWYRAPDVLMGS------RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDI 224
Query: 550 MGQ-DESAW 557
MG +ES W
Sbjct: 225 MGTPNESLW 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV++++ +P+ + +L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 116 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGELG-IVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 169 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 223 LGTPDEVVW 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 28/257 (10%)
Query: 309 RDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXX 368
+DG V +V G +G ++ + +++G G G Y+
Sbjct: 10 KDGSKVTTVVATPG--QGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 67
Query: 369 XXXXXXDEWLRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXX 422
E L+++ L H NIV +R Y +G KDE++L V DY+P
Sbjct: 68 DKRFKNRE-LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 423 XPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG- 480
+PV + K + LA++H + + H + N+++D + D G
Sbjct: 127 AKQTLPVIYVKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 181
Query: 481 VHQLF----HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MA 535
QL + + Y APEL F + + DV+S G VL E+L G+ +
Sbjct: 182 AKQLVRGEPNVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIF 235
Query: 536 KGD-GELGIVKWVQMMG 551
GD G +V+ ++++G
Sbjct: 236 PGDSGVDQLVEIIKVLG 252
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NIV + + +++L+LV++++ +P+ + +L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF------FI 491
+GLAF H + + H L N++++ G ++D G+ + F P +
Sbjct: 112 ----LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGEL-GIVKWVQM 549
Y APE+ + + D++S G + E++T + + GD E+ + + +
Sbjct: 165 TLWYRAPEILLGC------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 550 MGQ-DESAW 557
+G DE W
Sbjct: 219 LGTPDEVVW 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 435 LKLASDSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---- 485
L++ A GLA LH K + H L S NI+V + G CI+D+G+ +
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 486 ------HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+ P Y APE+ + ++R D+++FG+VL E+ ++ G
Sbjct: 197 NQLDVGNNPRVGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 255
Query: 540 E 540
E
Sbjct: 256 E 256
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 124 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 179 NVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 233 VEIIKVLG 240
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 123
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 124 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG-ELGIVKWVQMMGQDESAWE 558
+K+ + + KF + DV++FGV+L EI T M+ G +L V +E
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YE 228
Query: 559 VFDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 435 LKLASDSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---- 485
L++ A GLA LH K + H L S NI+V + G CI+D+G+ +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 486 ------HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+ P Y APE+ + ++R D+++FG+VL E+ ++ G
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
Query: 540 E 540
E
Sbjct: 227 E 227
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 123
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 124 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 124 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 179 NVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 233 VEIIKVLG 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 124 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 179 NVSYICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 233 VEIIKVLG 240
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 123
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 124 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 122
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 123 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 120
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 121 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 119 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG-ELGIVKWVQMMGQDESAWE 558
+K+ + + KF + DV++FGV+L EI T M+ G +L V +E
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YE 223
Query: 559 VFDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 120
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 121 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 133 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 189
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 190 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 235
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 119 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG-ELGIVKWVQMMGQDESAWE 558
+K+ + + KF + DV++FGV+L EI T M+ G +L V +E
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YE 223
Query: 559 VFDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 132 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 188
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 189 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 234
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 123
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 124 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG-ELGIVKWVQMMGQDESAWE 558
+K+ + + KF + DV++FGV+L EI T M+ G +L V +E
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YE 228
Query: 559 VFDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 133 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 189
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 190 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 235
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 119 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 119 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 119 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 131
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 132 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG-ELGIVKWVQMMGQDESAWE 558
+K+ + + KF + DV++FGV+L EI T M+ G +L V +E
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YE 236
Query: 559 VFDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 237 LLEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 288
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 125 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 181
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 182 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 227
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L + A
Sbjct: 119 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG-ELGIVKWVQMMGQDESAWE 558
+K+ + + KF + DV++FGV+L EI T M+ G +L V +E
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YE 223
Query: 559 VFDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H +L++ N +V I D G+ +
Sbjct: 123 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
++ T ++ +++ + F D++SFGVVL EI
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 167 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 212
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H L++ N +V I D G+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
++ T ++ +++ + F D++SFGVVL EI
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H +L++ N +V I D G+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
++ T ++ +++ + F D++SFGVVL EI
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 167 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 161
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 162 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 207
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H L++ N +V I D G+ +
Sbjct: 121 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
++ T ++ +++ + F D++SFGVVL EI
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 24/165 (14%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ RH NI+ Y KD L +V + +M + + +A
Sbjct: 85 VLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQM----FQLIDIAR 139
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV---------HQLFHTPFF 490
+A+G+ +LH N + H + S+NI + + I D G+ Q P
Sbjct: 140 QTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG 196
Query: 491 INDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
+ + APE ++ +NN +S + DVYS+G+VL E++TG++
Sbjct: 197 -SVLWMAPEVIRMQDNNPFSFQ-----SDVYSYGIVLYELMTGEL 235
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 162 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 207
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 107 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 163
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 164 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+V+ L H +V + C + +F++ +Y+ R + L++
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMC 111
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L H L++ N +V+ G +SD G+ + + ++D Y +
Sbjct: 112 KDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYTSS 163
Query: 499 E-----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
++++ KF + D+++FGV++ EI + GKM
Sbjct: 164 RGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+V+ L H +V + C + +F++ +Y+ R + L++
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMC 126
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L H L++ N +V+ G +SD G+ + + ++D Y +
Sbjct: 127 KDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYTSS 178
Query: 499 -----ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
++++ KF + D+++FGV++ EI + GKM
Sbjct: 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------H 482
K + +A +A+G+ +LH + + H L S+NI + + I D G+ H
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Q I + APE ++ + N YS + DVY+FG+VL E++TG++
Sbjct: 162 QFEQLSGSI--LWMAPEVIRMQDKNPYSFQ-----SDVYAFGIVLYELMTGQL 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H L++ N +V I D G+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
++ T ++ +++ + F D++SFGVVL EI
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+V+ L H +V + C + +F++ +Y+ R + L++
Sbjct: 55 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMC 110
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L H L++ N +V+ G +SD G+ + + ++D Y +
Sbjct: 111 KDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYTSS 162
Query: 499 -----ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
++++ KF + D+++FGV++ EI + GKM
Sbjct: 163 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+V+ L H +V + C + +F++ +Y+ R + L++
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMC 117
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L H L++ N +V+ G +SD G+ + + ++D Y +
Sbjct: 118 KDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYTSS 169
Query: 499 -----ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
++++ KF + D+++FGV++ EI + GKM
Sbjct: 170 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 211
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+V+ L H +V + C + +F++ +Y+ R + L++
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMC 111
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L H L++ N +V+ G +SD G+ + + ++D Y +
Sbjct: 112 KDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYTSS 163
Query: 499 -----ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
++++ KF + D+++FGV++ EI + GKM
Sbjct: 164 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+V+ L H +V + C + +F++ +Y+ R + L++
Sbjct: 51 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMC 106
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L H L++ N +V+ G +SD G+ + + ++D Y +
Sbjct: 107 KDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-----YVLDDEYTSS 158
Query: 499 -----ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
++++ KF + D+++FGV++ EI + GKM
Sbjct: 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 200
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 124 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 179 NVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 233 VEIIKVLG 240
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY 123
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 124 VKLYMY--QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 179 NVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 233 VEIIKVLG 240
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 119
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L A
Sbjct: 120 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 65 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 124
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 125 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 179
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 180 NVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 233
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 234 VEIIKVLG 241
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 124 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 179 NVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 233 VEIIKVLG 240
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 21/161 (13%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
LR + + H NIV + C + + LV +Y G P+ +
Sbjct: 53 LRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHA 105
Query: 438 AS---DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC-ISDIGVHQLFHTPFFIND 493
S ++G+A+LH L H L N+++ G I D G T N
Sbjct: 106 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 165
Query: 494 ---AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
A+ APE+ +NYS++ CDV+S+G++L E++T
Sbjct: 166 GSAAWMAPEV--FEGSNYSEK-----CDVFSWGIILWEVIT 199
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 30/238 (12%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 116
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L A
Sbjct: 117 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559
+K+ + + KF + DV++FGV+L EI T M+ G +E+
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-----------IDPSQVYEL 222
Query: 560 FDFELIMDK------EMEEEMRXXXXXXXXXXXXXPKDRPNMSIVHRMIEDIRTKGSI 611
+ + M++ ++ E MR P DRP+ + +H+ E + + SI
Sbjct: 223 LEKDYRMERPEGCPEKVYELMR-------ACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V+ L +A+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVNAVVLLYMAT 123
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L A
Sbjct: 124 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KDE++L V DY+P +PV +
Sbjct: 68 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 127
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 128 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 182
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 183 NVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 236
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 237 VEIIKVLG 244
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 21/161 (13%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
LR + + H NIV + C + + LV +Y G P+ +
Sbjct: 52 LRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHA 104
Query: 438 AS---DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC-ISDIGVHQLFHTPFFIND 493
S ++G+A+LH L H L N+++ G I D G T N
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164
Query: 494 ---AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
A+ APE+ +NYS++ CDV+S+G++L E++T
Sbjct: 165 GSAAWMAPEV--FEGSNYSEK-----CDVFSWGIILWEVIT 198
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR- 434
E +++IG +H NI+++ C L+++ +Y PG + +N
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPG-LEYSYNPSH 141
Query: 435 -----------LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
+ A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 484 LFHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ L+H +V + A K+ ++++ +++ + P+ K + ++
Sbjct: 63 VMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLP--KLIDFSA 118
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V I+D G+ ++ ++ Y A E
Sbjct: 119 QIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE-----DNEYTARE 170
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L+EI+T
Sbjct: 171 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 177 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ L+H +V + A K+ ++++ +++ + P+ K + ++
Sbjct: 236 VMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLP--KLIDFSA 291
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V I+D G+ ++ ++ Y A E
Sbjct: 292 QIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE-----DNEYTARE 343
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L+EI+T
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR- 434
E +++IG +H NI+++ C L+++ +Y PG + +N
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG-LEYSYNPSH 141
Query: 435 -----------LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
+ A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 484 LFHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR- 434
E +++IG +H NI+++ C L+++ +Y PG + +N
Sbjct: 77 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG-LEYSYNPSH 133
Query: 435 -----------LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
+ A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 484 LFHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 191 DIHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 239
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR- 434
E +++IG +H NI+++ C L+++ +Y PG + +N
Sbjct: 126 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG-LEYSYNPSH 182
Query: 435 -----------LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
+ A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 484 LFHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 288
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR- 434
E +++IG +H NI+++ C L+++ +Y PG + +N
Sbjct: 78 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG-LEYSYNPSH 134
Query: 435 -----------LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
+ A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 484 LFHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 192 DIHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 240
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ ++H N+V + C + +++ +++ R V L +A+
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC---NRQEVSAVVLLYMAT 116
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
+ + +L K + H L++ N +V + ++D G+ +L A
Sbjct: 117 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + + KF + DV++FGV+L EI T M+ G
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR- 434
E +++IG +H NI+++ C L+++ +Y PG + +N
Sbjct: 74 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG-LEYSYNPSH 130
Query: 435 -----------LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
+ A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 484 LFHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 188 DIHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 236
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 92 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 92 EMMKMIG--KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGY--------NKAHLFHGHLSSSNIVVDQLGNACISDIG 480
+ WN+ +A ++GL++LH +K + H S N+++ A ++D G
Sbjct: 109 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFG 168
Query: 481 VHQLFHTPFFINDA--------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
+ F D Y APE+ N+ QR + R D+Y+ G+VL E+++
Sbjct: 169 LAVRFEPGKPPGDTHGQVGTRRYMAPEV-LEGAINF-QRDAFLRIDMYAMGLVLWELVSR 226
Query: 533 -KMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMR 575
K A G + ++ + + +GQ S E+ E+++ K+M ++
Sbjct: 227 CKAADGPVDEYMLPFEEEIGQHPSLEEL--QEVVVHKKMRPTIK 268
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
L H +V C+ + +++V +Y+ G P ++ L++ D +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYI-SNGCLLNYLRSHGKGLEP---SQLLEMCYDVCE 115
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP----- 498
G+AFL + H L++ N +VD+ +SD G+ T + ++D Y +
Sbjct: 116 GMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGM-----TRYVLDDQYVSSVGTKF 167
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
+K++ + K+ + DV++FG+++ E+ + GKM
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM 204
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLK- 436
+ ++ L+HSNIV + + K L LV+++L D K L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ------------------DLKKLLDV 92
Query: 437 ----LASDSAKG--LAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487
L S +AK L L+G H + H L N+++++ G I+D G+ + F
Sbjct: 93 CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI 152
Query: 488 PF------FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
P + Y AP++ + +K+ D++S G + E++ G
Sbjct: 153 PVRKYTHEIVTLWYRAPDVLMGS------KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N V + I D G+ +
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
++ T ++ +++ + + F DV+SFGVVL EI T
Sbjct: 209 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG---------- 425
E +++IG +H NI+++ C L+++ +Y PG
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 426 -RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
+ + A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 138 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 252
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 81 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 138
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 79 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 241
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG---------- 425
E +++IG +H NI+++ C L+++ +Y PG
Sbjct: 70 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 426 -RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
+ + A A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
H + N APE F+ R + + DV+SFGV+L EI T
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 92 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 84 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 141
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 246
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLK- 436
+ ++ L+HSNIV + + K L LV+++L D K L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ------------------DLKKLLDV 92
Query: 437 ----LASDSAKG--LAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487
L S +AK L L+G H + H L N+++++ G I+D G+ + F
Sbjct: 93 CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI 152
Query: 488 PF------FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
P + Y AP++ + +K+ D++S G + E++ G
Sbjct: 153 PVRKYTHEVVTLWYRAPDVLMGS------KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLK- 436
+ ++ L+HSNIV + + K L LV+++L D K L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ------------------DLKKLLDV 92
Query: 437 ----LASDSAKG--LAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487
L S +AK L L+G H + H L N+++++ G I+D G+ + F
Sbjct: 93 CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI 152
Query: 488 PF------FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
P + Y AP++ + +K+ D++S G + E++ G
Sbjct: 153 PVRKYTHEVVTLWYRAPDVLMGS------KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 375 DEWLRVIGGL---RHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMP--- 428
DE L+ I + H NIVS KDEL+LV L G
Sbjct: 58 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT- 487
+D + + + +GL +LH K H + + NI++ + G+ I+D GV T
Sbjct: 118 LDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
Query: 488 ----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
F + APE+ R + + D++SFG+ +E+ TG
Sbjct: 175 GDITRNKVRKTFVGTPCWMAPEV------MEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 92 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 446 AFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-QLFHTPFFINDA----YNAPEL 500
A H + H + SNI++D+ GN + D G+ QL + DA Y APE
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE- 195
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + S++ + R DV+S G+ L E+ TG+
Sbjct: 196 --RIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 375 DEWLRVIGGL---RHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMP--- 428
DE L+ I + H NIVS KDEL+LV L G
Sbjct: 53 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 112
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT- 487
+D + + + +GL +LH K H + + NI++ + G+ I+D GV T
Sbjct: 113 LDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
Query: 488 ----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
F + APE+ R + + D++SFG+ +E+ TG
Sbjct: 170 GDITRNKVRKTFVGTPCWMAPEV------MEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
E V+ L H +V + C + + LV++++ R L
Sbjct: 51 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ----RGLFAAETLL 106
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAY 495
+ D +G+A+L +A + H L++ N +V + +SD G+ T F ++D Y
Sbjct: 107 GMCLDVCEGMAYL---EEASVIHRDLAARNCLVGENQVIKVSDFGM-----TRFVLDDQY 158
Query: 496 NAPE-----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + +S ++ + DV+SFGV++ E+ +
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+ + C L+++ +Y PG R+
Sbjct: 92 EMMKMIG--KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--PFFINDAYNAPE 499
AKG+++L L H L++ N++V + I+D G+ +L + D P
Sbjct: 129 AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP- 184
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + +R+F + DV+S+GV + E++T DG
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
E V+ L H +V + C + + LV++++ R L
Sbjct: 71 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ----RGLFAAETLL 126
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAY 495
+ D +G+A+L +A + H L++ N +V + +SD G+ T F ++D Y
Sbjct: 127 GMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGM-----TRFVLDDQY 178
Query: 496 NAPE-----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + +S ++ + DV+SFGV++ E+ +
Sbjct: 179 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+V+ L H +V + C + +F++ +Y+ R + L++
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMC 126
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D + + +L H L++ N +V+ G +SD G+ + + +
Sbjct: 127 KDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF 183
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
++++ KF + D+++FGV++ EI + GKM
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
V+ L H +V + C + + LV++++ R L +
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ----RGLFAAETLLGMC 112
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP 498
D +G+A+L +A + H L++ N +V + +SD G+ T F ++D Y +
Sbjct: 113 LDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGM-----TRFVLDDQYTSS 164
Query: 499 E-----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +S ++ + DV+SFGV++ E+ +
Sbjct: 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
E V+ L H +V + C + + LV++++ R L
Sbjct: 51 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ----RGLFAAETLL 106
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAY 495
+ D +G+A+L +A + H L++ N +V + +SD G+ T F ++D Y
Sbjct: 107 GMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGM-----TRFVLDDQY 158
Query: 496 NAPE-----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + +S ++ + DV+SFGV++ E+ +
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRL 435
E V+ L H +V + C + + LV++++ R L
Sbjct: 49 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ----RGLFAAETLL 104
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAY 495
+ D +G+A+L +A + H L++ N +V + +SD G+ T F ++D Y
Sbjct: 105 GMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGM-----TRFVLDDQY 156
Query: 496 NAPE-----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKM 534
+ +K+ + +S ++ + DV+SFGV++ E+ + GK+
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 381 IGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXP--GRMPVDWNKRLKLA 438
IG L H++IV + C G L LV YLP ++ ++W ++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 142
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFINDAY 495
AKG+ +L + + H +L++ N+++ ++D GV L ++A
Sbjct: 143 ---AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + K+ + DV+S+GV + E++T
Sbjct: 197 TP--IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L+++NI+V + ++D G+ +L +
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ Y PG R+
Sbjct: 92 EMMKMIG--KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
V+ L+H +V + A K+ ++++ +++ + P+ K + ++
Sbjct: 230 VMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLP--KLIDFSA 285
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+AF+ N H L ++NI+V I+D G+ ++ F I + APE
Sbjct: 286 QIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV-GAKFPIK--WTAPE 339
Query: 500 -LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ F + F + DV+SFG++L+EI+T
Sbjct: 340 AINFGS--------FTIKSDVWSFGILLMEIVT 364
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 381 IGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXP--GRMPVDWNKRLKLA 438
IG L H++IV + C G L LV YLP ++ ++W ++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 124
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFINDAY 495
AKG+ +L + + H +L++ N+++ ++D GV L ++A
Sbjct: 125 ---AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + K+ + DV+S+GV + E++T
Sbjct: 179 TP--IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ Y PG R+
Sbjct: 92 EMMKMIG--KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 24/163 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ ++ L H NI+ + K +LV ++ R D +
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII-----NRHKFDECDAANI 151
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVHQLFHTPFFINDA 494
G+ +LH +N + H + NI+++ L N I D G+ F + + D
Sbjct: 152 MKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 495 -----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
Y APE+ ++K+ ++CDV+S GV++ +L G
Sbjct: 209 LGTAYYIAPEV--------LKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 25/172 (14%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG---RMPVDWN 432
E +++IG +H NI+++ C L+++ +Y PG N
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 433 KRLKLASDSAKGLAFLHGYNKAHL-----FHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487
+L+S A+ +L H L++ N++V + I+D G+ + H
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 488 PFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
N APE F+ R + + DV+SFGV+L EI T
Sbjct: 203 IDXXKKTTNGRLPVKWMAPEALFD-------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 378 LRVIGGLRHSNIVSIRA--YCNG--KDELFL--VYDYLPXXXXXXXXXXXXXPGRMPVDW 431
L+++ L H NIV +R Y +G KD ++L V DY+P +PV +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 432 NKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIG-VHQLF---- 485
K + LA++H + + H + N+++D + D G QL
Sbjct: 124 VKLY--MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGD-GELGI 543
+ + Y APEL F + + DV+S G VL E+L G+ + GD G +
Sbjct: 179 NVSXICSRYYRAPELIFGATD------YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 544 VKWVQMMG 551
V+ ++++G
Sbjct: 233 VEIIKVLG 240
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 92 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 19/101 (18%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------HQLFHTPFFIN 492
+GL ++H A + H L SN++V++ I D G+ HQ F T +
Sbjct: 170 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y APEL S ++ Q D++S G + E+L +
Sbjct: 227 RWYRAPELML------SLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG--------RM 427
E +++IG +H NI+++ C L+++ +Y PG R+
Sbjct: 92 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 428 PVDWNKRLKLASDS---AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484
P + L S + A+G+ +L H L++ N++V + I+D G+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 485 FHTPFFINDAYN--------APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ N APE F+ R + + DV+SFGV++ EI T
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFD-------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA- 494
K+A K L LH +K + H + SN++++ LG + D G+ + + ++D
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGI-----SGYLVDDVA 165
Query: 495 ---------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE N +Q+ + + D++S G+ ++E+
Sbjct: 166 KDIDAGCKPYMAPE---RINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 19/101 (18%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV----------HQLFHTPFFIN 492
+GL ++H A + H L SN++V++ I D G+ HQ F T +
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y APEL S ++ Q D++S G + E+L +
Sbjct: 226 RWYRAPELML------SLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 231 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDM 285
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 286 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L + L H L++ N++V + I+D G+ +L YNA
Sbjct: 150 AKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD---EKEYNADGGK 203
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ RKF + DV+S+GV + E++T
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 314 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDM 368
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 369 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 425
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 56 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 110
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 111 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 167
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 231 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDM 285
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 286 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 58 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDM 112
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 113 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 169
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 170 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 54 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 108
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 109 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 165
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 166 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H +V + A ++ ++++ +Y+ G++ + K + ++
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEG-GKVLLP--KLIDFSA 117
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPE 499
A+G+A++ + + H L ++N++V + I+D G+ ++ ++ Y A E
Sbjct: 118 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE-----DNEYTARE 169
Query: 500 -----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + F + DV+SFG++L EI+T
Sbjct: 170 GAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKLRHEKLVQLYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L + L H L++ N++V + I+D G+ +L YNA
Sbjct: 127 AKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD---EKEYNADGGK 180
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ RKF + DV+S+GV + E++T
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
L + D +G+A+L +A + H L++ N +V + +SD G+ T F ++D
Sbjct: 107 LGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGM-----TRFVLDDQ 158
Query: 495 YNAPE-----LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
Y + +K+ + +S ++ + DV+SFGV++ E+ +
Sbjct: 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S GV++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGVIMGEMIKG 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKLRHEKLVQLYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYC-----NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
LR + H N+V + C + + ++ LV++++ P +P +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETI 122
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-----HQLFHT 487
K L +GL FLH + H L NI+V G ++D G+ +Q+ T
Sbjct: 123 K--DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT 177
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
P + Y APE+ Q + D++S G + E+ K
Sbjct: 178 PVVVTLWYRAPEVLL-------QSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-QLFHTPFFINDA 494
K+A K L LH +K + H + SN++++ LG + D G+ L + DA
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 495 ----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE N +Q+ + + D++S G+ ++E+
Sbjct: 215 GCKPYMAPE---RINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S GV++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGVIMGEMIKG 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-H 482
P +P+ LK D A G+ +L N H L++ N ++ C++D G+
Sbjct: 141 PKHIPL--QTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSK 195
Query: 483 QLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+++ ++ +K+ + + R + + DV++FGV + EI T M G
Sbjct: 196 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 232 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 286
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 287 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAK 343
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 344 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 435 LKLASDSAKGLAFLH-----GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---- 485
L+LA +A GLA LH K + H S N++V CI+D+G+ +
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 486 ------HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+ P Y APE+ + + ++ D+++FG+VL EI + G
Sbjct: 168 DYLDIGNNPRVGTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIV 226
Query: 540 E 540
E
Sbjct: 227 E 227
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV---------HQLFHTPFFIND 493
+GL ++H A++ H L SN++++ + I D G+ H F T +
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y APE+ N+ + + + D++S G +L E+L+ +
Sbjct: 194 WYRAPEIMLNS------KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 231 QVMKKLRHEKLVQLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDM 285
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 286 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ +RH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKIRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF---FINDAYNAPE 499
KGL ++H A + H L N+ V++ I D G+ + + + Y APE
Sbjct: 139 KGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPE 195
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK-MAKGDGELGIVKWV 547
+ N ++ Q D++S G ++ E++TGK + KG L +K +
Sbjct: 196 VILN------WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 52/181 (28%)
Query: 378 LRVIGGLRHSNIVSIR-----AYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
++++ RH N++ IR + ++++V D M D
Sbjct: 92 IQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDL------------------METDLY 133
Query: 433 KRLK---LASDSA--------KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV 481
K LK L++D +GL ++H A++ H L SN++++ + I D G+
Sbjct: 134 KLLKSQQLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGL 190
Query: 482 HQLF-----HTPFFINDA----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
++ HT F Y APE+ N+ + + + D++S G +L E+L+
Sbjct: 191 ARIADPEHDHTGFLTEXVATRWYRAPEIMLNS------KGYTKSIDIWSVGCILAEMLSN 244
Query: 533 K 533
+
Sbjct: 245 R 245
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH- 482
PG P+D + + + KGL +LH K H + ++N+++ + G ++D GV
Sbjct: 98 PG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG 152
Query: 483 -----QLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Q+ F + APE+ Q + + D++S G+ +E+ G+
Sbjct: 153 QLTDTQIKRNTFVGTPFWMAPEV-------IKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH- 482
PG P+D + + + KGL +LH K H + ++N+++ + G ++D GV
Sbjct: 118 PG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG 172
Query: 483 -----QLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Q+ F + APE+ Q + + D++S G+ +E+ G+
Sbjct: 173 QLTDTQIKRNTFVGTPFWMAPEV-------IKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH- 482
PG P+D + + + KGL +LH K H + ++N+++ + G ++D GV
Sbjct: 98 PG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG 152
Query: 483 -----QLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Q+ F + APE+ Q + + D++S G+ +E+ G+
Sbjct: 153 QLTDTQIKRNXFVGTPFWMAPEV-------IKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH- 482
PG P+D + + + KGL +LH K H + ++N+++ + G ++D GV
Sbjct: 113 PG--PLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG 167
Query: 483 -----QLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Q+ F + APE+ Q + + D++S G+ +E+ G+
Sbjct: 168 QLTDTQIKRNXFVGTPFWMAPEV-------IKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H L++ N +V I D G+ +
Sbjct: 119 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
+ T +++ + F D++SFGVVL EI
Sbjct: 176 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT F Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT F Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H L++ N +V I D G+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
+ T +++ + F D++SFGVVL EI
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 65 QVMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDM 119
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L
Sbjct: 120 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
PGR P + +++A++ A G+A+L N H L++ N +V I D G+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
+ T +++ + F D++SFGVVL EI
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 386 HSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMP-----------VDWNKR 434
H NI+++ C + L+L +Y P P + +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
L A+D A+G+ +L ++ H +L++ NI+V + A I+D G+ + ++
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKT 196
Query: 495 YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + + + DV+S+GV+L EI++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 193 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLNAMH------YNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 197 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT F Y A
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRA 186
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 187 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 62 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDM 116
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
++ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 117 SAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 173
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
Query: 386 HSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMP-----------VDWNKR 434
H NI+++ C + L+L +Y P P + +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
L A+D A+G+ +L ++ H L++ NI+V + A I+D G+ + ++
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKT 199
Query: 495 YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + + + DV+S+GV+L EI++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 201
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 202 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 87/239 (36%), Gaps = 28/239 (11%)
Query: 303 GDYGGARDGGDVEEMVMFEGCNKGFRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXX 362
G G+ DV E+ + K F ++ ++ G G GA Y
Sbjct: 32 GGRAGSLKDPDVAELFFKDDPEKLFSDLREI--------GHGSFGAVYFARDVRNSEVVA 83
Query: 363 XXXXXXXXXXXXDEW------LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXX 416
++W +R + LRH N + R + +LV +Y
Sbjct: 84 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL 143
Query: 417 XXXXXXXPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACI 476
+ P+ + + + +GLA+LH +N + H + + NI++ + G +
Sbjct: 144 LEVH-----KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKL 195
Query: 477 SDIGVHQLFHTP-FFINDAY-NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
D G + F+ Y APE+ + ++ + DV+S G+ +E+ K
Sbjct: 196 GDFGSASIMAPANXFVGTPYWMAPEVILAMDEG----QYDGKVDVWSLGITCIELAERK 250
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 115 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 172 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 196 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 196 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYNAPE 499
+GL ++H A + H L SN+ V++ I D G+ + T + Y APE
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ N + + Q D++S G ++ E+L GK
Sbjct: 199 IMLNWMH------YNQTVDIWSVGCIMAELLQGK 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRA 197
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 198 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYNAP 498
A G+ +L N H L++ NI+V+ +SD G+ ++ + P
Sbjct: 157 AAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ S RKF DV+SFG+V+ E++T
Sbjct: 214 -IRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRA 197
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 198 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYNAPE 499
+GL ++H A + H L SN+ V++ I D G+ + T + Y APE
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ N + + Q D++S G ++ E+L GK
Sbjct: 199 IMLNWMH------YNQTVDIWSVGCIMAELLQGK 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRA 197
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 198 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
Query: 386 HSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMP-----------VDWNKR 434
H NI+++ C + L+L +Y P P + +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
L A+D A+G+ +L ++ H L++ NI+V + A I+D G+ + ++
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKT 189
Query: 495 YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + + + DV+S+GV+L EI++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ T +++ + + F DV+SFGVVL EI T
Sbjct: 172 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 210 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 376 EWLRVIGGLRHSNIVSIRAYCN--GKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNK 433
+ + ++ L H N+V + + +D L++V++ + P P+ ++
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV------NQGPVMEVPTLKPLSEDQ 138
Query: 434 RLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH-TPFFIN 492
D KG+ +LH Y K + H + SN++V + G+ I+D GV F + ++
Sbjct: 139 ARFYFQDLIKGIEYLH-YQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRC-DVYSFGVVLLEILTGK 533
+ P + + +++ F + DV++ GV L + G+
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483
P P +K +++A + A G+A+L N H L++ N +V + I D G+ +
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 484 -LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ T +++ + + F DV+SFGVVL EI T
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 208 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 154 AKGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 201 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 202
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 203 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYC-----NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
LR + H N+V + C + + ++ LV++++ P +P +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETI 114
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-----HQLFHT 487
K L +GL FLH + H L NI+V G ++D G+ +Q+
Sbjct: 115 K--DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA 169
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
P + Y APE+ Q + D++S G + E+ K
Sbjct: 170 PVVVTLWYRAPEVLL-------QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 202
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 203 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 203 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------ 481
P+ + +++ +D+ + L F H + + H + +NI++ + D G+
Sbjct: 112 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 482 --HQLFHTPFFINDA-YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + T I A Y +PE ++ + R DVYS G VL E+LTG+
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVD-------ARSDVYSLGCVLYEVLTGE 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 202
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 203 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------ 481
P+ + +++ +D+ + L F H + + H + +NI++ + D G+
Sbjct: 112 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIAD 168
Query: 482 --HQLFHTPFFINDA-YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + T I A Y +PE ++ + R DVYS G VL E+LTG+
Sbjct: 169 SGNSVXQTAAVIGTAQYLSPEQARGDSVD-------ARSDVYSLGCVLYEVLTGE 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 201
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 202 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 120
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P D Y
Sbjct: 121 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLP 175
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 176 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 204
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR-LK 436
+ ++ L H NIVS+ + + L LV++++ + +D NK L+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL------------KKVLDENKTGLQ 117
Query: 437 LASDSAKGLAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF---- 489
+ L G H + H L N++++ G ++D G+ + F P
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT 177
Query: 490 --FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ Y AP++ + +K+ D++S G + E++TGK
Sbjct: 178 HEVVTLWYRAPDVLMGS------KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 197
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 198 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------ 481
P+ + +++ +D+ + L F H + + H + +NI++ + D G+
Sbjct: 112 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 482 --HQLFHTPFFINDA-YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + T I A Y +PE ++ + R DVYS G VL E+LTG+
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVD-------ARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------ 481
P+ + +++ +D+ + L F H + + H + +NI++ + D G+
Sbjct: 112 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 482 --HQLFHTPFFINDA-YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + T I A Y +PE ++ + R DVYS G VL E+LTG+
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVD-------ARSDVYSLGCVLYEVLTGE 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------ 481
P+ + +++ +D+ + L F H + + H + +NI++ + D G+
Sbjct: 112 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 482 --HQLFHTPFFINDA-YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + T I A Y +PE ++ + R DVYS G VL E+LTG+
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVD-------ARSDVYSLGCVLYEVLTGE 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 23/162 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ + LRH NI+ + Y + ++L+ +Y P D +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 139
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFIND---- 493
++ A L++ H + H + N+++ G I+D G H P D
Sbjct: 140 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCG 194
Query: 494 --AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y PE+ R ++ D++S GV+ E L GK
Sbjct: 195 TLDYLPPEM-------IEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 195 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 213
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 214 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 197 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 193 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 193 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 196 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVATRWYRA 213
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 214 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 160 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 135 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 189
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 190 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 154 AKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 173 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ +++V +Y+ R+P + + +
Sbjct: 62 QVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDM 116
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
++ A G+A++ N H L ++NI+V + ++D G+ +L +
Sbjct: 117 SAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAK 173
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKR-LK 436
+ ++ L H NIVS+ + + L LV++++ + +D NK L+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL------------KKVLDENKTGLQ 117
Query: 437 LASDSAKGLAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF---- 489
+ L G H + H L N++++ G ++D G+ + F P
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT 177
Query: 490 --FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ Y AP++ + +K+ D++S G + E++TGK
Sbjct: 178 HEVVTLWYRAPDVLMGS------KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 210
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 211 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 209
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 210 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ + H +V + + +L+L+ D+L M + + + LA
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLA- 137
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------HQLFHTPFFIND 493
+ A GL LH + + L NI++D+ G+ ++D G+ H+ F
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTV 194
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Y APE+ +++S D +S+GV++ E+LTG +
Sbjct: 195 EYMAPEVVNRQGHSHS-------ADWWSYGVLMFEMLTGSL 228
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 187
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 188 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ + H IV + + +L+L+ D+L M + + + LA
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLA- 133
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------HQLFHTPFFIND 493
+ A L LH + + L NI++D+ G+ ++D G+ H+ F
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Y APE+ ++R Q D +SFGV++ E+LTG +
Sbjct: 191 EYMAPEV-------VNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 158 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 196 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 134 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 188
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 189 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 193 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF---HTPFFIND-----AY 495
G+ +LHG + H + N+++D+ N ISD G+ +F + +N Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 496 NAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
APEL +R+F + DV+S G+VL +L G++
Sbjct: 174 VAPEL-------LKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 209
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 210 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 210
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 211 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA- 494
K+A K L LH +K + H + SN++++ LG D G+ + + ++D
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGI-----SGYLVDDVA 192
Query: 495 ---------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
Y APE N +Q+ + + D++S G+ +E+
Sbjct: 193 KDIDAGCKPYXAPE---RINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 187
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 188 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 186
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 187 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 149 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P ++ L
Sbjct: 149 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------ 481
P+ + +++ +D+ + L F H + + H + +NI++ + D G+
Sbjct: 129 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 482 --HQLFHTPFFINDA-YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + T I A Y +PE ++ + R DVYS G VL E+LTG+
Sbjct: 186 SGNSVTQTAAVIGTAQYLSPEQARGDSVD-------ARSDVYSLGCVLYEVLTGE 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ + H IV + + +L+L+ D+L M + + + LA
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLA- 133
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------HQLFHTPFFIND 493
+ A L LH + + L NI++D+ G+ ++D G+ H+ F
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Y APE+ ++R Q D +SFGV++ E+LTG +
Sbjct: 191 EYMAPEV-------VNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYC-----NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
LR + H N+V + C + + ++ LV++++ P +P +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETI 114
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-----HQLFHT 487
K L +GL FLH + H L NI+V G ++D G+ +Q+
Sbjct: 115 K--DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD 169
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
P + Y APE+ Q + D++S G + E+ K
Sbjct: 170 PVVVTLWYRAPEVLL-------QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S G ++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 146 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 200
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 201 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 186
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 187 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ + H IV + + +L+L+ D+L M + + + LA
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLA- 134
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------HQLFHTPFFIND 493
+ A L LH + + L NI++D+ G+ ++D G+ H+ F
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
Y APE+ ++R Q D +SFGV++ E+LTG +
Sbjct: 192 EYMAPEV-------VNRRGHTQSADWWSFGVLMFEMLTGTL 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-L 484
+ P+ + + A+G+ FL + H L++ NI++ + I D G+ + +
Sbjct: 193 KEPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 485 FHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ P ++ LK+ + + + + DV+S+GV+L EI +
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 186
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 187 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+R++ L H NIV + + L+LV +Y GRM + R K
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLVMEY---ASGGEVFDYLVAHGRMK-EKEARAKF 120
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-----PFFIN 492
+ + H + ++ H L + N+++D N I+D G F F +
Sbjct: 121 -RQIVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGS 176
Query: 493 DAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 177 PPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 212
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
++++ L H NI+ + K + LV+D++ + + L
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP------FFI 491
+GL +LH + + H L +N+++D+ G ++D G+ + F +P +
Sbjct: 123 -----QGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
Y APEL F R + D+++ G +L E+L
Sbjct: 175 TRWYRAPELLF------GARMYGVGVDMWAVGCILAELL 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLA 438
+++ L+H +V + A + ++ +++V +Y+ GR + + +A
Sbjct: 56 QIMKKLKHDKLVQLYAVVS-EEPIYIVTEYM--NKGSLLDFLKDGEGRA-LKLPNLVDMA 111
Query: 439 SDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC-ISDIGVHQLFHTPFFINDAYNA 497
+ A G+A++ N H L S+NI+V G C I+D G+ +L
Sbjct: 112 AQVAAGMAYIERMN---YIHRDLRSANILVGN-GLICKIADFGLARLIEDNEXTARQGAK 167
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E++T
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ L+H+NIV++ + + L LV++YL G + N +L L
Sbjct: 53 LLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDC----GNIINMHNVKLFLFQ 108
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA----- 494
+GLA+ H + + H L N+++++ G ++D G+ + P D
Sbjct: 109 -LLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL 164
Query: 495 -YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y P++ + + +Q D++ G + E+ TG+
Sbjct: 165 WYRPPDILLGSTDYSTQ------IDMWGVGCIFYEMATGR 198
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYNAPE 499
+GL ++H A + H L SN+ V++ I D G+ + T + Y APE
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPE 190
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ N + + Q D++S G ++ E+L GK
Sbjct: 191 IMLNWMH------YNQTVDIWSVGCIMAELLQGK 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 197 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 122
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFIND------AYNA 497
L++ H + H + N+++ G I+D G H P D Y
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLP 177
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 178 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 80/215 (37%), Gaps = 20/215 (9%)
Query: 327 FRNVGDLLKSSAELLGKGCVGATYKXXXXXXXXXXXXXXXXXXXXXXXDEW------LRV 380
F++ + L S +G G GA Y ++W +R
Sbjct: 9 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 381 IGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASD 440
+ LRH N + R + +LV +Y + P+ + +
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYC-----LGSASDLLEVHKKPLQEVEIAAVTHG 123
Query: 441 SAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-FFINDAY-NAP 498
+ +GLA+LH +N + H + + NI++ + G + D G + F+ Y AP
Sbjct: 124 ALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAP 180
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
E+ + ++ + DV+S G+ +E+ K
Sbjct: 181 EVILAMDEG----QYDGKVDVWSLGITCIELAERK 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 118 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 173
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
L + F +Y +PE +YS + D++S G+ L+E+ G+ G G
Sbjct: 174 LIDSMANSFVGTRSYMSPERL--QGTHYS-----VQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-----------HQLFH 486
A++ GL FLH + + L NI++D+ G+ I+D G+ ++
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG 181
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
TP Y APE+ N+S D +SFGV+L E+L G+
Sbjct: 182 TP-----DYIAPEILLGQKYNHS-------VDWWSFGVLLYEMLIGQ 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 21/163 (12%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+R++ L H NIV + + L+L+ +Y GRM K +
Sbjct: 62 VRIMKILNHPNIVKLFEVIETEKTLYLIMEY---ASGGEVFDYLVAHGRM-----KEKEA 113
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-----PFFIN 492
S + ++ + ++ + H L + N+++D N I+D G F F +
Sbjct: 114 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGS 173
Query: 493 DAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 174 PPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 209
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 197 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYC-----NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
LR + H N+V + C + + ++ LV++++ P +P +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV--DQDLRTYLDKAPPPGLPAETI 114
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-----HQLFHT 487
K L +GL FLH + H L NI+V G ++D G+ +Q+
Sbjct: 115 K--DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF 169
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
P + Y APE+ Q + D++S G + E+ K
Sbjct: 170 PVVVTLWYRAPEVLL-------QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S G ++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 221
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC---ISDIGVHQLFHTPFFINDA-----Y 495
G+ +LH +N + H L N++++ I D G+ +F + + Y
Sbjct: 148 GVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
APE+ ++K+ ++CDV+S GV+L +L G
Sbjct: 205 IAPEV--------LRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 23/151 (15%)
Query: 392 IRAYCNGKDE--LFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKGLAFLH 449
++ +C +D+ L++V +Y+P P + + + LA D+ +
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG--- 194
Query: 450 GYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-HQLFHTPFFINDA------YNAPE-LK 501
L H + N+++D+ G+ ++D G ++ T D Y +PE LK
Sbjct: 195 ------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 502 FNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
+ Y R+ CD +S GV L E+L G
Sbjct: 249 SQGGDGYYGRE----CDWWSVGVFLFEMLVG 275
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S G ++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC---ISDIGVHQLFHTPFFINDA-----Y 495
G+ ++H +N + H L NI+++ C I D G+ F + D Y
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA-KGDGELGIVKWVQ 548
APE+ + + ++CDV+S GV+L +L+G G E I+K V+
Sbjct: 190 IAPEV--------LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 379 RVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPG-RMPVDWNKRLKL 437
+V+ LRH +V + A + ++ + +V +Y+ R+P + + +
Sbjct: 55 QVMKKLRHEKLVQLYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDM 109
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNA 497
A+ A G+A++ N H L ++NI+V + ++D G+ +L
Sbjct: 110 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 166
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ +F + DV+SFG++L E+ T
Sbjct: 167 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW---NKR 434
+R++ L H NIV + + L+LV +Y G D+ + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY--------------ASGGEVFDYLVAHGR 109
Query: 435 LKLASDSAKGLAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFH----- 486
+K AK + H + H L + N+++D N I+D G F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
F + Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 170 DEFCGSPPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW---NKR 434
+R++ L H NIV + + L+LV +Y G D+ + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY--------------ASGGEVFDYLVAHGR 109
Query: 435 LKLASDSAKGLAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFH----- 486
+K AK + H + H L + N+++D N I+D G F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
F + Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 170 DTFCGSPPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC---ISDIGVHQLFHTPFFINDA-----Y 495
G+ ++H +N + H L NI+++ C I D G+ F + D Y
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA-KGDGELGIVKWVQ 548
APE+ + ++CDV+S GV+L +L+G G E I+K V+
Sbjct: 190 IAPEVLRGTYD--------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW---NKR 434
+R++ L H NIV + + L+LV +Y G D+ + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY--------------ASGGEVFDYLVAHGR 109
Query: 435 LKLASDSAKGLAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFH----- 486
+K AK + H + H L + N+++D N I+D G F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
F + Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 170 DTFCGSPPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW---NKR 434
+R++ L H NIV + + L+LV +Y G D+ + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY--------------ASGGEVFDYLVAHGR 109
Query: 435 LKLASDSAKGLAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFH----- 486
+K AK + H + H L + N+++D N I+D G F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
F + Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 170 DTFCGSPPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC---ISDIGVHQLFHTPFFINDA-----Y 495
G+ ++H +N + H L NI+++ C I D G+ F + D Y
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA-KGDGELGIVKWVQ 548
APE+ + ++CDV+S GV+L +L+G G E I+K V+
Sbjct: 190 IAPEVLRGTYD--------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 122
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P A Y
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLP 177
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 178 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 206
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 25/171 (14%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLP---XXXXXXXXXXXXXPGRMPVDWNKRLK 436
V+ ++H NIV R L++V DY +DW ++
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 437 LASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA-- 494
LA L + + H + S NI + + G + D G+ ++ ++ + A
Sbjct: 136 LA---------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI 186
Query: 495 ----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL 541
Y +PE+ N N + D+++ G VL E+ T K A G +
Sbjct: 187 GTPYYLSPEICENKPYN-------NKSDIWALGCVLYELCTLKHAFEAGSM 230
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P A Y
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLP 174
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 175 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+R++ L H NIV + + L+L+ +Y GRM K +
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLIMEY---ASGGEVFDYLVAHGRM-----KEKEA 116
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-----PFFIN 492
S + ++ + ++ + H L + N+++D N I+D G F F
Sbjct: 117 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGA 176
Query: 493 DAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 177 PPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P A Y
Sbjct: 120 ALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLP 174
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 175 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIGVHQLFHTPFFINDAYNAPELK 501
KGL FLH + H L NI + G+ I D+G+ L F PE
Sbjct: 140 KGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF-AKAVIGTPE-- 195
Query: 502 FNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
F Y + K+ + DVY+FG LE T +
Sbjct: 196 FXAPEXYEE-KYDESVDVYAFGXCXLEXATSE 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 33/169 (19%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW---NKR 434
+R++ L H NIV + + L+LV +Y G D+ + R
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY--------------ASGGEVFDYLVAHGR 109
Query: 435 LKLASDSAKGLAFLHGYNKAH---LFHGHLSSSNIVVDQLGNACISDIGVHQLFH----- 486
+K AK + H + H L + N+++D N I+D G F
Sbjct: 110 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
F Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 170 DAFCGAPPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-HQLFHTPFFIND 493
+ L + A G+ +L + H+ H L++ N++V N ISD+G+ +++ ++
Sbjct: 131 VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +++ KF D++S+GVVL E+ +
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFIND 493
+ A ++G+ +L + L H L++ NI+V + ISD G+ + ++ ++
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + + + DV+SFGV+L EI+T
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-QL 484
R+P + ++ +A +GLA+L K + H + SNI+V+ G + D GV QL
Sbjct: 110 RIPEEILGKVSIAV--LRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 165
Query: 485 FHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ F +Y APE + + D++S G+ L+E+ G+
Sbjct: 166 IDSMANSFVGTRSYMAPE-------RLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 437 LASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ---LFHTPFFIND 493
L KGL ++H A + H L N+ V++ I D G+ + T + +
Sbjct: 149 LVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 205
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y APE+ S + Q D++S G ++ E+LTGK
Sbjct: 206 WYRAPEVIL------SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
+ L + A G+ +L + H+ H L++ N++V N ISD+G+ +
Sbjct: 148 VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGL---------FREV 195
Query: 495 YNAPELKFNNNNNYSQR----------KFWQRCDVYSFGVVLLEILT 531
Y A K N+ R KF D++S+GVVL E+ +
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYC-----NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
LR + H N+V + C + + +L LV++++ PG +P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTETI 122
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH-----T 487
K + +GL FLH + + H L NI+V G ++D G+ +++ T
Sbjct: 123 KDMMF--QLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ Y APE+ Q + D++S G + E+ K
Sbjct: 178 SVVVTLWYRAPEVLL-------QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 19/160 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ + LRH NI+ + Y + ++L+ +Y P D +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 139
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VHQLF--HTPFFIND 493
++ A L++ H + H + N+++ G I+D G VH T
Sbjct: 140 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 196
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y PE+ R ++ D++S GV+ E L GK
Sbjct: 197 DYLPPEM-------IEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ V+ L H NI+ I +++V + G+ + +L
Sbjct: 71 IEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAEL 129
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC---ISDIGVHQLFHTPFFINDA 494
LA+ H H+ H L NI+ I D G+ +LF + +A
Sbjct: 130 MKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186
Query: 495 -----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
Y APE+ F + + +CD++S GVV+ +LTG
Sbjct: 187 AGTALYMAPEV-FKRDVTF-------KCDIWSAGVVMYFLLTG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S G ++ E++ G
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + ++ P + L
Sbjct: 158 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA--- 494
A++ GL FLH + + L NI++D+ G+ I+D G+ + + DA
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTN 176
Query: 495 -------YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y APE+ N+S D +SFGV+L E+L G+
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHS-------VDWWSFGVLLYEMLIGQ 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S G ++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S G ++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT Y A
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVATRWYRA 210
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 211 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 437 LASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ---LFHTPFFIND 493
L KGL ++H A + H L N+ V++ I D G+ + T + +
Sbjct: 131 LVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 187
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y APE+ S + Q D++S G ++ E+LTGK
Sbjct: 188 WYRAPEVIL------SWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-----FDEQRTATYITELAN 124
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 182 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 208
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + + D++S G ++ E++ G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 221
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYC-----NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
LR + H N+V + C + + +L LV++++ PG +P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTETI 122
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH-----T 487
K + +GL FLH + + H L NI+V G ++D G+ +++ T
Sbjct: 123 KDMMF--QLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ Y APE+ Q + D++S G + E+ K
Sbjct: 178 SVVVTLWYRAPEVLL-------QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 19/160 (11%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+ + LRH NI+ + Y + ++L+ +Y P D +
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATY 130
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFIND 493
++ A L++ H + H + N+++ G I+D G VH T
Sbjct: 131 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 187
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
Y PE+ R ++ D++S GV+ E L GK
Sbjct: 188 DYLPPEM-------IEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D G+ + HT + Y A
Sbjct: 165 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 219
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + D++S G ++ E+LTG+
Sbjct: 220 PEIMLN------WMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
RH +I+ + + ++F+V +Y+ GR+ D + +L
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN---GRL--DEKESRRLFQQILS 127
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA-----YNAP 498
G+ + H + + H L N+++D NA I+D G+ + F+ + Y AP
Sbjct: 128 GVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAP 184
Query: 499 ELKFNNNNNYSQRKFW-QRCDVYSFGVVLLEILTGKMAKGDGEL 541
E+ S R + D++S GV+L +L G + D +
Sbjct: 185 EV-------ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-----FDEQRTATYITELAN 124
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VHQLFHTPFFINDA--YNAPE 499
L++ H + H + N+++ G I+D G VH + Y PE
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPE 181
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 182 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 208
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 122 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 178
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
PF + Y APE+ + + D++S G ++ E++ G
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 124
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 182 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 123
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VHQLF--HTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 180
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 181 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPE 176
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 177 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VHQLF--HTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 176
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 177 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 378 LRVIGGLRHSNIVSIRAYC-----NGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWN 432
LR + H N+V + C + + +L LV++++ PG +P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG-VPTETI 122
Query: 433 KRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH-----T 487
K + +GL FLH + + H L NI+V G ++D G+ +++ T
Sbjct: 123 KDMMF--QLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ Y APE+ Q + D++S G + E+ K
Sbjct: 178 SVVVTLWYRAPEVLL-------QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 122
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 180 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 206
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+R++ L H NIV + + L+LV +Y W K +
Sbjct: 57 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GWMKEKEA 108
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH-----TPFFIN 492
+ + ++ + ++ + H L + N+++D N I+D G F F +
Sbjct: 109 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS 168
Query: 493 DAYNAPELKFNNNNNYSQRKF-WQRCDVYSFGVVLLEILTGKM 534
Y APEL + +K+ DV+S GV+L +++G +
Sbjct: 169 PPYAAPEL-------FQGKKYDGPEVDVWSLGVILYTLVSGSL 204
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFIND-- 493
K+ K L +L K + H + SNI++D+ G + D G+ + ++D
Sbjct: 128 KMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGI-----SGRLVDDKA 180
Query: 494 --------AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
AY APE + + ++ + R DV+S G+ L+E+ TG+
Sbjct: 181 KDRSAGCAAYMAPER--IDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 60/158 (37%), Gaps = 21/158 (13%)
Query: 385 RHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAKG 444
RH N+V C L ++ ++ +D NK ++A + KG
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKG 142
Query: 445 LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF--------HTPFFINDAY- 495
+ +LH + H L S N+ D G I+D G+ + I + +
Sbjct: 143 MGYLHAKG---ILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 496 --NAPEL--KFNNNNNYSQRKFWQRCDVYSFGVVLLEI 529
APE+ + + + + F + DV++ G + E+
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 113 QMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 169
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 437 LASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-----------HQLF 485
+ + KGL +LH K H + + NI+++ G+A ++D GV + +
Sbjct: 130 ILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI 186
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGD 538
TPF++ APE+ N D++S G+ +E+ GK D
Sbjct: 187 GTPFWM-----APEVIQEIGYNCV-------ADIWSLGITAIEMAEGKPPYAD 227
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 122
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 180 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 118
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 119 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 175
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 176 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPE 176
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 177 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF--INDAYNAP- 498
AKG+ FL H L++ N ++D+ ++D G+ + + F +++ A
Sbjct: 202 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 124
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 181
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ R ++ D++S GV+ E L GK
Sbjct: 182 M-------IEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 11/150 (7%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 124
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELKFN 503
L++ H + H + N+++ G I+D G H P L +
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCG-TLDYL 178
Query: 504 NNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
R ++ D++S GV+ E L GK
Sbjct: 179 PPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 116
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 117 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 173
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 174 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 200
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 437 LASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFH-----TP 488
L SD + L +LH + + H L NIV+ Q I D+G + T
Sbjct: 126 LLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
F Y APEL Q+K+ D +SFG + E +TG
Sbjct: 183 FVGTLQYLAPEL-------LEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF--INDAYNAP- 498
AKG+ FL H L++ N ++D+ ++D G+ + + F +++ A
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 437 LASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFH-----TP 488
L SD + L +LH + + H L NIV+ Q I D+G + T
Sbjct: 127 LLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 183
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
F Y APEL Q+K+ D +SFG + E +TG
Sbjct: 184 FVGTLQYLAPEL-------LEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 176
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 177 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 27/128 (21%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV--------DQLGNA-----CISDIGV 481
+ L A G+A LH + H L NI+V DQ A ISD G+
Sbjct: 118 ISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 482 HQLF---HTPFFIN-------DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + F N + APEL +NN ++R+ + D++S G V IL+
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 532 -GKMAKGD 538
GK GD
Sbjct: 235 KGKHPFGD 242
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 11/150 (7%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 120
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELKFN 503
L++ H + H + N+++ G I+D G H P + L +
Sbjct: 121 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSG-TLDYL 174
Query: 504 NNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
R ++ D++S GV+ E L GK
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 120
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 121 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 177
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 178 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 204
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF--INDAYNAP- 498
AKG+ FL H L++ N ++D+ ++D G+ + + F +++ A
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 200
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 176
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 177 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF--INDAYNAP- 498
AKG+ FL H L++ N ++D+ ++D G+ + + F +++ A
Sbjct: 148 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 204
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 161 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 216
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
L + F +Y +PE + + D++S G+ L+E+ G+
Sbjct: 217 LIDSMANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 121
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P Y
Sbjct: 122 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLP 176
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 177 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 205
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF--INDAYNAP- 498
AKG+ FL H L++ N ++D+ ++D G+ + + F +++ A
Sbjct: 141 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 197
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF--INDAYNAP- 498
AKG+ FL H L++ N ++D+ ++D G+ + + F +++ A
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH------QLFHTPFFINDAYNA 497
GL LH N + + L N+++D GN ISD+G+ Q + + A
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PEL ++S D ++ GV L E++ +
Sbjct: 358 PELLLGEEYDFS-------VDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH------QLFHTPFFINDAYNA 497
GL LH N + + L N+++D GN ISD+G+ Q + + A
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PEL ++S D ++ GV L E++ +
Sbjct: 358 PELLLGEEYDFS-------VDYFALGVTLYEMIAAR 386
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P Y
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLP 174
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 175 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 99 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
L + F +Y +PE +YS + D++S G+ L+E+ G+
Sbjct: 155 LIDSMANSFVGTRSYMSPERL--QGTHYSVQS-----DIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 99 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
L + F +Y +PE +YS + D++S G+ L+E+ G+
Sbjct: 155 LIDSMANSFVGTRSYMSPERL--QGTHYSVQS-----DIWSMGLSLVEMAVGR 200
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----PFFINDAYNA 497
A G+ +L N H L++ NI+V+ +SD G+ + P + +
Sbjct: 119 AAGMKYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ RKF DV+S+G+V+ E+++
Sbjct: 176 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH------QLFHTPFFINDAYNA 497
GL LH N + + L N+++D GN ISD+G+ Q + + A
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PEL ++S D ++ GV L E++ +
Sbjct: 358 PELLLGEEYDFS-------VDYFALGVTLYEMIAAR 386
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 99 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
L + F +Y +PE +YS + D++S G+ L+E+ G+
Sbjct: 155 LIDSMANSFVGTRSYMSPERL--QGTHYSVQS-----DIWSMGLSLVEMAVGR 200
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH------QLFHTPFFINDAYNA 497
GL LH N + + L N+++D GN ISD+G+ Q + + A
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMA 357
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PEL ++S D ++ GV L E++ +
Sbjct: 358 PELLLGEEYDFS-------VDYFALGVTLYEMIAAR 386
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 126 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
L + F +Y +PE +YS + D++S G+ L+E+ G+
Sbjct: 182 LIDSMANSFVGTRSYMSPERL--QGTHYS-----VQSDIWSMGLSLVEMAVGR 227
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 23/155 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-----FDEQRTATYITELAN 123
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P D Y
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLP 178
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
PE+ ++ ++ D++S GV+ E L G
Sbjct: 179 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVG 206
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 99 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
L + F +Y +PE +YS + D++S G+ L+E+ G+
Sbjct: 155 LIDSMANSFVGTRSYMSPERL--QGTHYSVQS-----DIWSMGLSLVEMAVGR 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 23/156 (14%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 122
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA------YNA 497
L++ H + H + N+++ G I+D G H P Y
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLP 177
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ ++ ++ D++S GV+ E L GK
Sbjct: 178 PEMIEGRMHD-------EKVDLWSLGVLCYEFLVGK 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--PFFIND 493
+L + G+ +L N H L++ N+++ A ISD G+ + ++
Sbjct: 114 ELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ LK+ + RKF R DV+S+GV + E L+
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 161 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 214
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 16/131 (12%)
Query: 427 MPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ--- 483
M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 119 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 484 --LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL 541
TP+ + Y APE+ + + D++S G ++ E++ G + G
Sbjct: 176 TNFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGELVKGSVI-FQGTD 227
Query: 542 GIVKWVQMMGQ 552
I +W +++ Q
Sbjct: 228 HIDQWNKVIEQ 238
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 436 KLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--PFFIND 493
+L + G+ +L N H +L++ N+++ A ISD G+ + ++
Sbjct: 440 ELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ LK+ + RKF R DV+S+GV + E L+
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----PFFINDAYNA 497
A G+ +L N H L++ NI+V+ +SD G+ + P + +
Sbjct: 145 AAGMKYLADMNYVH---RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ RKF DV+S+G+V+ E+++
Sbjct: 202 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 99 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 484 LFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
L + F +Y +PE +YS + D++S G+ L+E+ G+
Sbjct: 155 LIDSMANSFVGTRSYMSPERL--QGTHYSVQS-----DIWSMGLSLVEMAVGR 200
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 261
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + + P + L
Sbjct: 158 AKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I G+ + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 385 RHSNIVS-IRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
++ NIV+ + +Y G DEL++V +YL +D + + + +
Sbjct: 76 KNPNIVNYLDSYLVG-DELWVVMEYLAGGSLTDVVTETC------MDEGQIAAVCRECLQ 128
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-----------HQLFHTPFFIN 492
L FLH + H ++ S NI++ G+ ++D G + TP+++
Sbjct: 129 ALEFLHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM- 184
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
APE+ +++ + + D++S G++ +E++ G+
Sbjct: 185 ----APEV-------VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 127 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 180
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 443 KGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-----FFINDAYNA 497
+GL ++H A + H L SN+ V++ I D + + HT + Y A
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVATRWYRA 190
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
PE+ N + Q D++S G ++ E+LTG+
Sbjct: 191 PEIMLN------WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 130 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 183
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 121 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 174
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 134 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 187
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 130 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 183
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 134 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 187
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 131 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 184
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 137 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 190
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 232
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 128 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 181
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 134 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 187
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 129 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 182
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFIND 493
+ A ++G+ +L + L H L++ NI+V + ISD G+ + ++ +
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + + + DV+SFGV+L EI+T
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 127 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 180
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 130 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 183
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 130 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 183
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 129 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 182
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 133 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 186
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 127 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 180
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 127 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 180
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 127 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 180
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 152 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 205
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 247
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 119 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 175
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAP--- 498
AKG+ +L L H L++ N++V + I+D G+ +L Y+A
Sbjct: 128 AKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE---EKEYHAEGGK 181
Query: 499 -ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539
+K+ + R + + DV+S+GV + E++T DG
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 21/159 (13%)
Query: 380 VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLAS 439
++ ++H +V + D+L+ V DY+ R ++ R A+
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE----RCFLEPRARF-YAA 146
Query: 440 DSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV------HQLFHTPFFIND 493
+ A L +LH N + + L NI++D G+ ++D G+ H + F
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP 203
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
Y APE+ ++ + + D + G VL E+L G
Sbjct: 204 EYLAPEV-------LHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + + P + L
Sbjct: 158 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 424 PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV-H 482
P +P+ ++ D A G+ +L N H L++ N ++ + C++D G+
Sbjct: 131 PFNLPL--QTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 483 QLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ ++ + +K+ + + + DV++FGV + EI+T
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 125 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 181
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDLWSVGCIMGEMVCHKI 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 113 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVRHKI 217
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFIND 493
+ A ++G+ +L + L H L++ NI+V + ISD G+ + ++ +
Sbjct: 153 ISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + + + DV+SFGV+L EI+T
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + + P + L
Sbjct: 149 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + + P + L
Sbjct: 149 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
AKG+ FL H L++ NI++ + I D G+ + + P + L
Sbjct: 158 AKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 501 KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ R + + DV+SFGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 378 LRVIGGL-RHSNIVSIRAYCNGKDELFLVYDY------LPXXXXXXXXXXXXXPGRMPVD 430
L+++ L +H NIV++ C + ++ +Y L GR P++
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLE 150
Query: 431 WNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPF 489
L +S A+G+AFL N H +++ N+++ A I D G+ + + +
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+I +K+ + + + DV+S+G++L EI +
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 378 LRVIGGL-RHSNIVSIRAYCNGKDELFLVYDY------LPXXXXXXXXXXXXXPGRMPVD 430
L+++ L +H NIV++ C + ++ +Y L GR P++
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLE 158
Query: 431 WNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPF 489
L +S A+G+AFL N H +++ N+++ A I D G+ + + +
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+I +K+ + + + DV+S+G++L EI +
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
TP+ + Y APE+ + + D++S G ++ E++ K+
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMG-------YKENVDLWSVGCIMGEMVCHKI 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 15/111 (13%)
Query: 427 MPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ--- 483
M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 484 --LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP+ + Y APE+ + D++S G ++ E++ G
Sbjct: 178 TNFMMTPYVVTRYYRAPEVILGMG-------YAANVDIWSVGCIMGELVKG 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 425 GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH-Q 483
GR+P ++ +A KGL +L K + H + SNI+V+ G + D GV Q
Sbjct: 102 GRIPEQILGKVSIAV--IKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 157
Query: 484 LFH---TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAK 536
L F +Y +PE +YS + D++S G+ L+E+ G+ +
Sbjct: 158 LIDEMANEFVGTRSYMSPERL--QGTHYSVQS-----DIWSMGLSLVEMAVGRYPR 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 21/161 (13%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
RH +I+ + + + F+V +Y+ GR+ +RL SA
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAV 124
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA-----YNAP 498
H + H L N+++D NA I+D G+ + F+ D+ Y AP
Sbjct: 125 DYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 499 ELKFNNNNNYSQRKFW-QRCDVYSFGVVLLEILTGKMAKGD 538
E+ S R + D++S GV+L +L G + D
Sbjct: 180 EV-------ISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 27/128 (21%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV--------DQLGNA-----CISDIGV 481
+ L A G+A LH + H L NI+V DQ A ISD G+
Sbjct: 118 ISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 482 HQLF---HTPFFIN-------DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ F N + APEL +NN ++R+ + D++S G V IL+
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 532 -GKMAKGD 538
GK GD
Sbjct: 235 KGKHPFGD 242
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN---ACISDIGVHQ-LFHTPFF 490
L +A D A G +L + H H +++ N ++ G A I D G+ Q ++ ++
Sbjct: 144 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 161 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 140 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 135 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA 494
L+L KG+ ++H L H L SNI + I D G+ ND
Sbjct: 139 LELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGL-----VTSLKNDG 190
Query: 495 YNAPE---LKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
L++ + S + + + D+Y+ G++L E+L
Sbjct: 191 KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 128 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 183 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 141 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 138 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 162 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 145 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 200 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 135 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 191
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 128 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 183 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 158 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFI--NDAYNAP 498
AKG+ +L H L++ N ++D+ ++D G+ + ++ ++ N
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 121
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I++ G VH T Y PE
Sbjct: 122 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 178
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ R ++ D++S GV+ E L GK
Sbjct: 179 M-------IEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-- 483
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 484 ---LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
TP + Y APE+ + + D++S G ++ E++ G
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMIKG 221
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 144 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 143 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 19/154 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 122
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I++ G VH T Y PE
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ ++ ++ D++S GV+ E L GK
Sbjct: 180 MIEGRMHD-------EKVDLWSLGVLCYEFLVGK 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 144 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 160 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 216
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 158 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 143 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF--INDAYNAP- 498
AKG+ FL H L++ N ++D+ ++D G+ + F +++ A
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + +KF + DV+SFGV+L E++T
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 158 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 150 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 206
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFHTPFFINDAYNAPEL 500
A+G+ +L + H L++ N ++D+ ++D G+ + + ++ + L
Sbjct: 134 ARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 501 --KFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
K+ + +F + DV+SFGV+L E+LT
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 157 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 212 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 157 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 212 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYNAP 498
A G+ +L + H L++ NI+++ +SD G+ ++ + P
Sbjct: 157 ASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + + RKF DV+S+G+VL E+++
Sbjct: 214 -IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 157 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 212 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 157 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 212 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 155 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 210 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 157 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 212 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 170 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 226
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 161 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 217
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----PFFINDAYNA 497
A G+ +L + H L++ NI+V+ +SD G+ + P + +
Sbjct: 126 ASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 498 PELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + RKF D +S+G+V+ E+++
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYNAP 498
A G+ +L H L++ NI+++ +SD G+ ++ + P
Sbjct: 157 ASGMKYLSDMGAVH---RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+++ + + RKF DV+S+G+VL E+++
Sbjct: 214 -IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 157 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 212 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 20/161 (12%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
+R++ L+H N+V++ K L LV++Y +P K +
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVK--SI 107
Query: 438 ASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFINDA- 494
+ + + F H +N H + NI++ + + D G +L P ++ ++
Sbjct: 108 TWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA 164
Query: 495 ---YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
Y +PEL + ++ DV++ G V E+L+G
Sbjct: 165 TRWYRSPELLVGDT------QYGPPVDVWAIGCVFAELLSG 199
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485
+ +D + A + LA+L H +++ N++V + D G+ +
Sbjct: 105 KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFHTPFFINDA-----Y 495
G+ ++H K + H L N++++ + N I D G+ F + D Y
Sbjct: 161 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 217
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
APE+ + ++CDV+S GV+L +L+G
Sbjct: 218 IAPEVLHGT--------YDEKCDVWSTGVILYILLSG 246
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----VHQLFHTPFF 490
L +A D A G +L + H H +++ N ++ G ++ IG ++ ++
Sbjct: 184 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240
Query: 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+K+ + + F + D +SFGV+L EI +
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFHTPFFINDA-----Y 495
G+ ++H K + H L N++++ + N I D G+ F + D Y
Sbjct: 162 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 218
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
APE+ + ++CDV+S GV+L +L+G
Sbjct: 219 IAPEVLHGT--------YDEKCDVWSTGVILYILLSG 247
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 483 QLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM--AKGDGE 540
Q TP F Y APEL N N Y + CD++S GV+L +L+G++ D
Sbjct: 164 QPLKTPCFTLH-YAAPELL--NQNGYDES-----CDLWSLGVILYTMLSGQVPFQSHDRS 215
Query: 541 LGIVKWVQMMGQ 552
L V++M +
Sbjct: 216 LTCTSAVEIMKK 227
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFHTPFFINDA-----Y 495
G+ ++H K + H L N++++ + N I D G+ F + D Y
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 200
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
APE+ + ++CDV+S GV+L +L+G
Sbjct: 201 IAPEVLHGTYD--------EKCDVWSTGVILYILLSG 229
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELK 501
AKG+ +L H L++ N ++D+ ++D G+ + D Y+
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR---------DMYDKEXXS 189
Query: 502 FNNNN------------NYSQRKFWQRCDVYSFGVVLLEILT 531
+N + +KF + DV+SFGV+L E++T
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFHTPFFINDA-----Y 495
G+ ++H K + H L N++++ + N I D G+ F + D Y
Sbjct: 138 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 194
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
APE+ + ++CDV+S GV+L +L+G
Sbjct: 195 IAPEVLHGT--------YDEKCDVWSTGVILYILLSG 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 8/150 (5%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
L H NIVS+ D +LV +Y+ P+ + + +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE-----SHGPLSVDTAINFTNQILD 122
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELKFN 503
G+ H + H + NI++D I D G+ + + +++
Sbjct: 123 GIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179
Query: 504 NNNNYSQRKFWQRCDVYSFGVVLLEILTGK 533
+ + D+YS G+VL E+L G+
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
LR + G H NI+ ++ FLV+D + G + +++ L
Sbjct: 64 LRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKK-------------GELFDYLTEKVTL 108
Query: 438 ASDSAKG-----LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----------VH 482
+ + L + +K ++ H L NI++D N ++D G +
Sbjct: 109 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 168
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
++ TP +Y APE ++ + N+N+ + + D++S GV++ +L G
Sbjct: 169 EVCGTP-----SYLAPEIIECSMNDNHP--GYGKEVDMWSTGVIMYTLLAG 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 377 WLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW-NKRL 435
+LR+ LRH +I+ + KDE+ +V +Y G D+ +R
Sbjct: 57 YLRL---LRHPHIIKLYDVIKSKDEIIMVIEY---------------AGNELFDYIVQRD 98
Query: 436 KLASDSAKG-----LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF 490
K++ A+ ++ + ++ + H L N+++D+ N I+D G+ + F
Sbjct: 99 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 158
Query: 491 INDA-----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIV 544
+ + Y APE+ + Y+ DV+S GV+L +L ++ D + ++
Sbjct: 159 LKTSCGSPNYAAPEVI--SGKLYA----GPEVDVWSCGVILYVMLCRRLPFDDESIPVL 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 377 WLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW-NKRL 435
+LR+ LRH +I+ + KDE+ +V +Y G D+ +R
Sbjct: 61 YLRL---LRHPHIIKLYDVIKSKDEIIMVIEY---------------AGNELFDYIVQRD 102
Query: 436 KLASDSAKG-----LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF 490
K++ A+ ++ + ++ + H L N+++D+ N I+D G+ + F
Sbjct: 103 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 162
Query: 491 INDA-----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIV 544
+ + Y APE+ + Y+ DV+S GV+L +L ++ D + ++
Sbjct: 163 LKTSCGSPNYAAPEVI--SGKLYA----GPEVDVWSCGVILYVMLCRRLPFDDESIPVL 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 377 WLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW-NKRL 435
+LR+ LRH +I+ + KDE+ +V +Y G D+ +R
Sbjct: 67 YLRL---LRHPHIIKLYDVIKSKDEIIMVIEY---------------AGNELFDYIVQRD 108
Query: 436 KLASDSAKG-----LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF 490
K++ A+ ++ + ++ + H L N+++D+ N I+D G+ + F
Sbjct: 109 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 168
Query: 491 INDA-----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIV 544
+ + Y APE+ + Y+ DV+S GV+L +L ++ D + ++
Sbjct: 169 LKTSCGSPNYAAPEVI--SGKLYA----GPEVDVWSCGVILYVMLCRRLPFDDESIPVL 221
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 442 AKGLAFLH--GYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---TPFFINDAYN 496
A G+ +L GY H L++ NI+++ +SD G+ ++ +
Sbjct: 157 ASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
P +++ + + RKF DV+S+G+VL E+++
Sbjct: 212 IP-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 377 WLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDW-NKRL 435
+LR+ LRH +I+ + KDE+ +V +Y G D+ +R
Sbjct: 66 YLRL---LRHPHIIKLYDVIKSKDEIIMVIEY---------------AGNELFDYIVQRD 107
Query: 436 KLASDSAKG-----LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFF 490
K++ A+ ++ + ++ + H L N+++D+ N I+D G+ + F
Sbjct: 108 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167
Query: 491 INDA-----YNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIV 544
+ + Y APE+ + Y+ DV+S GV+L +L ++ D + ++
Sbjct: 168 LKTSCGSPNYAAPEVI--SGKLYA----GPEVDVWSCGVILYVMLCRRLPFDDESIPVL 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 128 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
LR + G H NI+ ++ FLV+D + G + +++ L
Sbjct: 77 LRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKK-------------GELFDYLTEKVTL 121
Query: 438 ASDSAKG-----LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----------VH 482
+ + L + +K ++ H L NI++D N ++D G +
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
++ TP +Y APE ++ + N+N+ + + D++S GV++ +L G
Sbjct: 182 EVCGTP-----SYLAPEIIECSMNDNHP--GYGKEVDMWSTGVIMYTLLAG 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 130 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 130 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 19/153 (12%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
LRH NI+ + Y + ++L+ +Y P D + ++ A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-----FDEQRTATYITELAN 123
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG--VH--QLFHTPFFINDAYNAPE 499
L++ H + H + N+++ G I+D G VH T Y PE
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 180
Query: 500 LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
+ ++ ++ D++S GV+ E L G
Sbjct: 181 MIEGRMHD-------EKVDLWSLGVLCYEFLVG 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 120 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 108 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 473 IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 114 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 472 IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
Query: 114 PHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMXXXXXXXXXXXXXXXDN 173
PHL L L N+ TG P+ H++ + L N + EI DN
Sbjct: 54 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLNLYDN 112
Query: 174 RFTGTLYSVNSSSRSILDFNVSNNQLSGQIP-AWMSP-FGGSSFAGNKNLCGRP 225
+ + + S+ N+++N + AW + S G CG P
Sbjct: 113 QISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 435 LKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--FFIN 492
++L + G+ +L +++ H L++ N+++ A ISD G+ + ++
Sbjct: 110 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ +K+ + KF + DV+SFGV++ E +
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELK 501
K +A+L N H ++ NI+V + D G+ + + + +K
Sbjct: 135 CKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 502 FNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + + + R+F DV+ F V + EIL+
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485
+ +D + A + LA+L H +++ N++V + D G+ +
Sbjct: 485 KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 486 HTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
+D + A + LA+L H +++ N++V + D G+ +
Sbjct: 111 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 167
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 168 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELK 501
K +A+L N H ++ NI+V + D G+ + + + +K
Sbjct: 123 CKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 502 FNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + + + R+F DV+ F V + EIL+
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
+D + A + LA+L H +++ N++V + D G+ +
Sbjct: 113 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
+D + A + LA+L H +++ N++V + D G+ +
Sbjct: 108 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 165 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 442 AKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELK 501
K +A+L N H ++ NI+V + D G+ + + + +K
Sbjct: 119 CKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 502 FNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+ + + + R+F DV+ F V + EIL+
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
+D + A + LA+L H +++ N++V + D G+ +
Sbjct: 110 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 166
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 167 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
+D + A + LA+L H +++ N++V + D G+ +
Sbjct: 136 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 192
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 193 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
+D + A + LA+L H +++ N++V + D G+ +
Sbjct: 108 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 165 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC---ISDIGVHQLFHTPFFINDA-----Y 495
G +LH +N + H L N++++ I D G+ F + + Y
Sbjct: 116 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 172
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
APE+ ++K+ ++CDV+S GV+L +L G
Sbjct: 173 IAPEV--------LRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 429 VDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488
+D + A + LA+L H +++ N++V + D G+ +
Sbjct: 105 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161
Query: 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNAC---ISDIGVHQLFHTPFFINDA-----Y 495
G +LH +N + H L N++++ I D G+ F + + Y
Sbjct: 133 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 189
Query: 496 NAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
APE+ ++K+ ++CDV+S GV+L +L G
Sbjct: 190 IAPEV--------LRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 428 PVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ-LFH 486
P++ L +S A+G+AFL N H +++ N+++ A I D G+ + + +
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 487 TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531
+I +K+ + + + DV+S+G++L EI +
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 21/161 (13%)
Query: 384 LRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKLASDSAK 443
RH +I+ + + + F+V +Y+ GR+ +RL SA
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAV 124
Query: 444 GLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA-----YNAP 498
H + H L N+++D NA I+D G+ + F+ + Y AP
Sbjct: 125 DYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 499 ELKFNNNNNYSQRKFW-QRCDVYSFGVVLLEILTGKMAKGD 538
E+ S R + D++S GV+L +L G + D
Sbjct: 180 EV-------ISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 38/171 (22%)
Query: 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPXXXXXXXXXXXXXPGRMPVDWNKRLKL 437
LR + G H NI+ ++ FLV+D + G + +++ L
Sbjct: 77 LRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKK-------------GELFDYLTEKVTL 121
Query: 438 ASDSAKG-----LAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIG----------VH 482
+ + L + +K ++ H L NI++D N ++D G +
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 483 QLFHTPFFINDAYNAPE-LKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG 532
+ TP +Y APE ++ + N+N+ + + D++S GV++ +L G
Sbjct: 182 SVCGTP-----SYLAPEIIECSMNDNHP--GYGKEVDMWSTGVIMYTLLAG 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 452 NKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDA-----YNAPELKFNNNN 506
++ + H L N+++D N I+D G+ + F+ + Y APE+ N
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI--NGK 182
Query: 507 NYSQRKFWQRCDVYSFGVVLLEILTGKMAKGD 538
Y+ DV+S G+VL +L G++ D
Sbjct: 183 LYA----GPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACIS--DIGVHQ 483
+ +D + A + LA+L H +++ N++V N C+ D G+ +
Sbjct: 485 KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVS--SNDCVKLGDFGLSR 539
Query: 484 LFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEIL 530
+ + +K+ + + R+F DV+ FGV + EIL
Sbjct: 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 426 RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485
+M +D + L G+ LH A + H L SNIVV I D G+ +
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 486 HTPFF-----INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534
T F + Y APE+ + + D++S G ++ E++ K+
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMG-------YKENVDIWSVGCIMGEMVCHKI 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,780,846
Number of Sequences: 62578
Number of extensions: 573854
Number of successful extensions: 1976
Number of sequences better than 100.0: 656
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 587
Number of HSP's that attempted gapping in prelim test: 1589
Number of HSP's gapped (non-prelim): 723
length of query: 640
length of database: 14,973,337
effective HSP length: 105
effective length of query: 535
effective length of database: 8,402,647
effective search space: 4495416145
effective search space used: 4495416145
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)