Query 006559
Match_columns 640
No_of_seqs 560 out of 4008
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 02:49:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006559.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006559hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.8E-53 1.3E-57 432.1 17.4 248 338-608 18-290 (299)
2 4aoj_A High affinity nerve gro 100.0 1.2E-52 4.1E-57 434.3 20.7 248 338-608 46-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 6.1E-53 2.1E-57 432.5 18.1 245 338-605 31-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1.9E-52 6.7E-57 427.0 20.7 248 338-608 41-301 (307)
5 3hmm_A TGF-beta receptor type- 100.0 1.5E-52 5.1E-57 430.3 17.8 260 338-610 8-300 (303)
6 4g3f_A NF-kappa-beta-inducing 100.0 6.8E-50 2.3E-54 412.2 16.9 241 338-608 63-317 (336)
7 3fpq_A Serine/threonine-protei 100.0 3E-49 1E-53 400.5 21.2 238 338-600 31-282 (290)
8 4fih_A Serine/threonine-protei 100.0 2.5E-49 8.5E-54 409.1 18.7 236 338-600 79-323 (346)
9 4b9d_A Serine/threonine-protei 100.0 1.8E-49 6.2E-54 410.8 16.8 238 337-600 28-276 (350)
10 4ase_A Vascular endothelial gr 100.0 1.8E-49 6E-54 413.9 16.6 250 337-608 68-348 (353)
11 4fie_A Serine/threonine-protei 100.0 4.1E-48 1.4E-52 409.7 19.3 236 338-600 156-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-48 5.7E-53 397.0 14.8 234 337-599 36-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 8.4E-48 2.9E-52 386.5 19.0 234 338-600 18-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 6.6E-48 2.2E-52 392.6 12.6 230 337-595 28-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.3E-46 4.3E-51 384.5 20.1 236 338-600 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 4.6E-44 1.6E-48 379.4 22.2 248 338-600 59-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 5.2E-44 1.8E-48 375.0 20.2 187 337-540 25-251 (361)
18 3v5w_A G-protein coupled recep 100.0 9.2E-43 3.1E-47 384.9 19.7 236 338-599 194-448 (689)
19 3uim_A Brassinosteroid insensi 100.0 3.5E-42 1.2E-46 357.9 20.8 261 338-607 35-311 (326)
20 2qkw_B Protein kinase; three-h 100.0 1.5E-41 5.1E-46 352.5 22.9 258 338-607 44-315 (321)
21 3uto_A Twitchin; kinase, muscl 100.0 6.2E-42 2.1E-46 380.6 20.6 240 337-600 161-410 (573)
22 3soc_A Activin receptor type-2 100.0 1.4E-41 4.9E-46 352.8 20.2 263 337-608 28-319 (322)
23 3p86_A Serine/threonine-protei 100.0 5.1E-41 1.7E-45 346.5 19.9 253 337-612 41-303 (309)
24 3s95_A LIMK-1, LIM domain kina 100.0 5E-41 1.7E-45 346.7 19.7 246 338-608 15-283 (310)
25 4hcu_A Tyrosine-protein kinase 100.0 2.3E-40 7.8E-45 334.5 22.3 244 338-608 15-267 (269)
26 2psq_A Fibroblast growth facto 100.0 1.1E-40 3.6E-45 352.9 19.4 249 337-608 85-365 (370)
27 3fxz_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45 340.5 19.8 236 338-600 25-269 (297)
28 3cbl_A C-FES, proto-oncogene t 100.0 3.1E-41 1.1E-45 358.1 13.9 245 337-608 118-375 (377)
29 3kul_A Ephrin type-A receptor 100.0 1.5E-40 5E-45 345.7 18.1 246 337-609 53-315 (325)
30 2qol_A Ephrin receptor; recept 100.0 8.6E-41 2.9E-45 353.9 16.2 245 337-608 49-310 (373)
31 3gen_A Tyrosine-protein kinase 100.0 7.6E-40 2.6E-44 333.1 22.2 245 338-609 29-282 (283)
32 1k9a_A Carboxyl-terminal SRC k 100.0 3.3E-40 1.1E-44 358.3 20.7 244 338-608 198-446 (450)
33 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.8E-40 1.3E-44 332.6 19.6 244 338-608 13-265 (268)
34 2eva_A TAK1 kinase - TAB1 chim 100.0 5.9E-40 2E-44 338.3 21.1 249 338-609 13-265 (307)
35 3fe3_A MAP/microtubule affinit 100.0 3.9E-40 1.3E-44 342.6 19.5 235 338-600 20-264 (328)
36 1qcf_A Haematopoetic cell kina 100.0 1.8E-40 6.1E-45 360.9 17.5 245 337-608 192-445 (454)
37 3q4u_A Activin receptor type-1 100.0 9E-40 3.1E-44 335.5 20.8 255 337-605 12-300 (301)
38 2c30_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 337.9 22.0 236 338-600 50-294 (321)
39 2nru_A Interleukin-1 receptor- 100.0 1.7E-39 5.7E-44 334.7 22.4 253 339-607 37-306 (307)
40 4f0f_A Serine/threonine-protei 100.0 2.7E-39 9.1E-44 329.8 22.8 247 337-605 23-287 (287)
41 1opk_A P150, C-ABL, proto-onco 100.0 3E-40 1E-44 362.7 16.6 247 337-609 224-480 (495)
42 3zgw_A Maternal embryonic leuc 100.0 7.1E-40 2.4E-44 342.8 18.4 236 337-600 14-260 (347)
43 3ugc_A Tyrosine-protein kinase 100.0 1.2E-40 4.1E-45 341.3 12.2 252 337-608 14-292 (295)
44 3g2f_A Bone morphogenetic prot 100.0 1E-39 3.5E-44 340.7 18.6 265 338-613 18-324 (336)
45 3tt0_A Basic fibroblast growth 100.0 2.4E-39 8.3E-44 344.2 21.7 252 337-611 73-356 (382)
46 2izr_A Casein kinase I isoform 100.0 1E-39 3.6E-44 340.0 18.4 249 337-609 13-283 (330)
47 3l9p_A Anaplastic lymphoma kin 100.0 1E-39 3.5E-44 345.1 18.5 249 337-608 75-346 (367)
48 3dtc_A Mitogen-activated prote 100.0 8.6E-40 2.9E-44 330.5 17.2 243 337-605 11-271 (271)
49 4eqm_A Protein kinase; transfe 100.0 3E-39 1E-43 330.9 21.3 248 338-609 16-277 (294)
50 3poz_A Epidermal growth factor 100.0 2.2E-39 7.7E-44 337.1 20.5 244 337-608 19-279 (327)
51 3lb7_A RAF proto-oncogene seri 100.0 3.3E-39 1.1E-43 332.7 21.1 250 337-608 40-301 (307)
52 3tki_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 338.3 18.2 238 338-600 12-261 (323)
53 3niz_A Rhodanese family protei 100.0 3.1E-39 1E-43 333.6 20.9 249 338-600 26-300 (311)
54 1csn_A Casein kinase-1; phosph 100.0 2.6E-39 8.9E-44 331.5 19.9 252 337-610 14-286 (298)
55 3t9t_A Tyrosine-protein kinase 100.0 4.6E-39 1.6E-43 324.2 21.1 244 338-608 13-265 (267)
56 1luf_A Muscle-specific tyrosin 100.0 1E-39 3.5E-44 341.7 16.8 251 337-610 51-338 (343)
57 3kmu_A ILK, integrin-linked ki 100.0 1.8E-39 6.1E-44 327.7 17.6 249 338-607 15-270 (271)
58 1o6l_A RAC-beta serine/threoni 100.0 3.6E-39 1.2E-43 336.3 20.3 234 338-600 10-260 (337)
59 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.6E-40 2.6E-44 355.7 15.7 245 337-608 188-441 (452)
60 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-39 7.7E-44 340.1 18.6 240 337-600 57-305 (349)
61 2yab_A Death-associated protei 100.0 4E-39 1.4E-43 339.1 20.5 239 337-600 16-272 (361)
62 3mdy_A Bone morphogenetic prot 100.0 1.7E-38 5.8E-43 331.4 25.0 259 337-609 41-333 (337)
63 3vhe_A Vascular endothelial gr 100.0 1E-39 3.5E-44 343.9 15.3 249 337-607 26-355 (359)
64 1tki_A Titin; serine kinase, m 100.0 3.3E-39 1.1E-43 334.8 18.9 239 338-600 10-257 (321)
65 3qd2_B Eukaryotic translation 100.0 4.5E-39 1.6E-43 334.8 19.9 236 338-600 11-325 (332)
66 2y0a_A Death-associated protei 100.0 7.1E-39 2.4E-43 333.1 21.3 239 337-600 15-271 (326)
67 3qup_A Tyrosine-protein kinase 100.0 2.4E-39 8.3E-44 336.0 17.0 254 337-613 27-304 (323)
68 2ivs_A Proto-oncogene tyrosine 100.0 6E-39 2E-43 331.4 19.9 249 337-608 27-312 (314)
69 4fr4_A YANK1, serine/threonine 100.0 6.2E-39 2.1E-43 339.7 20.3 238 338-599 20-270 (384)
70 3op5_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 340.5 18.6 254 337-610 39-332 (364)
71 3c0i_A Peripheral plasma membr 100.0 3.5E-39 1.2E-43 339.0 18.1 242 337-600 28-286 (351)
72 1fot_A TPK1 delta, CAMP-depend 100.0 8.1E-39 2.8E-43 331.1 20.1 233 338-599 11-257 (318)
73 4euu_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 329.6 22.1 266 338-608 14-310 (319)
74 2ozo_A Tyrosine-protein kinase 100.0 5.8E-39 2E-43 360.9 20.5 242 340-609 343-600 (613)
75 1ob3_A PFPK5, cell division co 100.0 7.9E-39 2.7E-43 326.7 19.4 249 338-600 7-280 (288)
76 3kex_A Receptor tyrosine-prote 100.0 6.4E-39 2.2E-43 333.3 18.8 243 338-608 18-277 (325)
77 3c1x_A Hepatocyte growth facto 100.0 3.7E-39 1.3E-43 341.2 17.0 245 338-610 94-358 (373)
78 2bdw_A Hypothetical protein K1 100.0 9.8E-39 3.3E-43 336.8 20.1 239 337-600 33-284 (362)
79 3soa_A Calcium/calmodulin-depe 100.0 1.4E-38 4.6E-43 343.9 21.6 239 337-600 15-267 (444)
80 1mp8_A Focal adhesion kinase 1 100.0 4.2E-39 1.4E-43 327.5 16.2 244 337-608 19-277 (281)
81 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.9E-39 2.7E-43 333.5 18.7 234 338-600 14-258 (336)
82 1t46_A HOMO sapiens V-KIT hard 100.0 5.4E-39 1.8E-43 331.6 17.2 251 337-609 27-309 (313)
83 2x4f_A Myosin light chain kina 100.0 8.7E-39 3E-43 338.4 19.1 244 338-605 94-349 (373)
84 3gxj_A TGF-beta receptor type- 100.0 3.8E-40 1.3E-44 338.5 8.3 259 338-610 8-300 (303)
85 3lzb_A Epidermal growth factor 100.0 9.1E-39 3.1E-43 332.5 18.6 244 337-608 19-279 (327)
86 2zv2_A Calcium/calmodulin-depe 100.0 1E-38 3.6E-43 327.4 18.4 238 338-600 18-292 (298)
87 3gni_B Strad alpha; kinase fol 100.0 1.8E-38 6.2E-43 338.4 20.8 192 337-539 29-240 (389)
88 3kn6_A Ribosomal protein S6 ki 100.0 1E-38 3.6E-43 331.7 18.4 239 338-600 16-270 (325)
89 3kfa_A Tyrosine-protein kinase 100.0 1.9E-38 6.6E-43 323.5 19.9 246 337-608 17-272 (288)
90 2h8h_A Proto-oncogene tyrosine 100.0 2.7E-39 9.4E-44 358.4 14.7 245 337-608 271-524 (535)
91 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-38 4.2E-43 329.1 18.5 233 337-600 61-304 (311)
92 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.4E-39 1.2E-43 338.7 14.6 230 337-595 27-269 (353)
93 4fl3_A Tyrosine-protein kinase 100.0 1.4E-38 4.8E-43 358.7 20.2 240 339-607 375-631 (635)
94 1rjb_A FL cytokine receptor; k 100.0 9.2E-39 3.2E-43 334.7 17.4 250 337-608 49-335 (344)
95 1b6c_B TGF-B superfamily recep 100.0 3.1E-38 1.1E-42 330.2 21.4 260 337-610 46-339 (342)
96 1mqb_A Ephrin type-A receptor 100.0 1.5E-38 5.1E-43 331.7 18.9 244 338-608 49-310 (333)
97 3o0g_A Cell division protein k 100.0 2.1E-38 7.2E-43 324.2 19.6 249 338-600 7-282 (292)
98 1u5q_A Serine/threonine protei 100.0 8.6E-39 2.9E-43 335.3 17.0 240 337-600 58-305 (348)
99 4fvq_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 328.9 13.9 246 337-610 12-278 (289)
100 3lxp_A Non-receptor tyrosine-p 100.0 3.2E-39 1.1E-43 334.5 13.4 256 337-609 35-312 (318)
101 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.8E-38 6E-43 333.0 18.9 234 338-600 46-293 (350)
102 4e5w_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43 331.4 13.1 250 337-606 25-301 (302)
103 2pmi_A Negative RE, cyclin-dep 100.0 1.9E-38 6.5E-43 328.6 18.6 259 338-606 10-301 (317)
104 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-38 4.1E-43 325.6 16.8 249 337-607 28-288 (289)
105 2wqm_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 325.9 19.8 255 337-612 36-302 (310)
106 3f66_A Hepatocyte growth facto 100.0 5.4E-38 1.8E-42 321.9 21.3 244 337-608 29-292 (298)
107 2pvf_A Fibroblast growth facto 100.0 1.5E-38 5.2E-43 331.8 17.4 249 337-608 39-319 (334)
108 1qpc_A LCK kinase; alpha beta 100.0 2.3E-38 7.9E-43 321.5 18.2 245 337-608 17-270 (279)
109 1u59_A Tyrosine-protein kinase 100.0 1.6E-38 5.6E-43 324.1 17.1 243 339-609 16-274 (287)
110 1kob_A Twitchin; kinase, intra 100.0 4.1E-38 1.4E-42 334.4 20.8 240 337-600 55-304 (387)
111 4dc2_A Protein kinase C IOTA t 100.0 1.7E-38 5.8E-43 337.5 17.7 233 337-595 56-307 (396)
112 3uc3_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 333.4 18.8 239 337-600 24-274 (361)
113 3is5_A Calcium-dependent prote 100.0 3.7E-38 1.3E-42 321.3 19.2 241 337-600 26-278 (285)
114 4hgt_A Casein kinase I isoform 100.0 2.2E-38 7.5E-43 324.2 17.6 250 337-610 13-283 (296)
115 2v62_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 333.6 16.6 250 337-607 41-328 (345)
116 3lxl_A Tyrosine-protein kinase 100.0 3.1E-39 1.1E-43 335.9 11.3 256 337-609 27-305 (327)
117 3pls_A Macrophage-stimulating 100.0 9.4E-38 3.2E-42 320.0 22.1 247 337-610 25-290 (298)
118 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.8E-38 1.6E-42 332.2 20.4 243 337-608 69-340 (365)
119 1byg_A CSK, protein (C-termina 100.0 2.6E-38 8.9E-43 321.0 17.6 245 337-608 25-274 (278)
120 2y94_A 5'-AMP-activated protei 100.0 4.5E-38 1.5E-42 342.1 20.5 235 338-600 21-266 (476)
121 3uzp_A CKI-delta, CKID, casein 100.0 4.1E-38 1.4E-42 322.3 19.1 251 337-611 13-284 (296)
122 2yex_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 316.3 21.3 238 338-600 12-261 (276)
123 2ac3_A MAP kinase-interacting 100.0 1.5E-38 5.1E-43 328.9 15.7 253 338-600 18-295 (316)
124 1xjd_A Protein kinase C, theta 100.0 1.2E-38 4E-43 333.5 14.9 233 338-599 22-268 (345)
125 3a62_A Ribosomal protein S6 ki 100.0 3.3E-38 1.1E-42 328.3 17.9 235 337-600 21-276 (327)
126 4agu_A Cyclin-dependent kinase 100.0 4.6E-38 1.6E-42 324.5 18.9 249 338-600 8-284 (311)
127 4eut_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 337.0 18.5 267 337-608 13-310 (396)
128 2h34_A Serine/threonine-protei 100.0 5.8E-38 2E-42 323.7 19.6 248 337-610 38-299 (309)
129 2i0e_A Protein kinase C-beta I 100.0 3.3E-38 1.1E-42 331.1 18.0 229 338-595 25-266 (353)
130 3hko_A Calcium/calmodulin-depe 100.0 4.5E-38 1.5E-42 329.5 18.9 251 337-605 30-337 (345)
131 1xbb_A Tyrosine-protein kinase 100.0 2E-38 6.8E-43 324.1 15.8 240 340-608 24-280 (291)
132 3f3z_A Calcium/calmodulin-depe 100.0 8.7E-38 3E-42 316.9 20.4 243 337-605 13-268 (277)
133 2vd5_A DMPK protein; serine/th 100.0 9.6E-39 3.3E-43 341.5 13.9 246 338-600 66-327 (412)
134 4aw2_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 341.8 16.1 245 338-600 79-338 (437)
135 3fdn_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 317.9 19.7 234 338-600 14-257 (279)
136 2zmd_A Dual specificity protei 100.0 4.5E-38 1.5E-42 335.1 18.9 243 337-600 60-320 (390)
137 3i6u_A CDS1, serine/threonine- 100.0 5.2E-38 1.8E-42 337.8 19.4 239 338-600 140-399 (419)
138 3llt_A Serine/threonine kinase 100.0 1.3E-37 4.6E-42 328.0 22.1 189 337-539 39-262 (360)
139 1t4h_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 317.7 21.5 238 338-600 31-282 (290)
140 3cc6_A Protein tyrosine kinase 100.0 6.8E-38 2.3E-42 318.5 19.1 242 337-607 16-273 (281)
141 1nxk_A MAP kinase-activated pr 100.0 7.9E-38 2.7E-42 334.2 20.5 238 339-600 68-321 (400)
142 3ork_A Serine/threonine protei 100.0 1E-38 3.6E-43 329.6 12.9 247 337-608 16-282 (311)
143 4ejn_A RAC-alpha serine/threon 100.0 2.5E-38 8.4E-43 343.5 16.5 236 337-600 152-404 (446)
144 2jii_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 333.6 15.1 251 337-610 46-339 (352)
145 3brb_A Proto-oncogene tyrosine 100.0 1.8E-37 6E-42 320.5 22.0 249 337-608 38-309 (313)
146 3v8s_A RHO-associated protein 100.0 2.7E-38 9.1E-43 337.8 16.2 241 338-600 74-329 (410)
147 3a8x_A Protein kinase C IOTA t 100.0 3.8E-38 1.3E-42 329.9 17.0 231 338-595 14-264 (345)
148 3dbq_A Dual specificity protei 100.0 7.6E-38 2.6E-42 327.7 19.3 243 337-600 13-273 (343)
149 2a2a_A Death-associated protei 100.0 1.5E-37 5E-42 322.5 21.2 239 337-600 16-272 (321)
150 2eue_A Carbon catabolite derep 100.0 5.7E-38 1.9E-42 318.0 17.6 234 338-600 18-262 (275)
151 2buj_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 323.9 18.8 250 337-608 33-307 (317)
152 3cok_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 315.6 20.3 235 338-600 16-262 (278)
153 3dls_A PAS domain-containing s 100.0 4.8E-38 1.6E-42 328.0 17.3 229 338-600 29-274 (335)
154 2i1m_A Macrophage colony-stimu 100.0 2.3E-38 7.9E-43 330.1 14.8 250 337-608 50-327 (333)
155 1p4o_A Insulin-like growth fac 100.0 3.9E-38 1.3E-42 326.7 16.3 249 337-608 29-300 (322)
156 3oz6_A Mitogen-activated prote 100.0 8.6E-38 2.9E-42 333.0 19.4 186 338-539 14-234 (388)
157 2xir_A Vascular endothelial gr 100.0 4.2E-38 1.4E-42 325.4 16.4 250 337-608 31-311 (316)
158 2r5t_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43 334.2 15.1 233 337-598 42-287 (373)
159 3rgf_A Cyclin-dependent kinase 100.0 6.5E-38 2.2E-42 335.9 18.0 201 329-539 17-239 (405)
160 3bhy_A Death-associated protei 100.0 2.5E-37 8.4E-42 314.5 21.2 248 337-609 9-276 (283)
161 3rp9_A Mitogen-activated prote 100.0 8E-38 2.7E-42 340.7 18.7 180 337-531 57-279 (458)
162 3kk8_A Calcium/calmodulin depe 100.0 1.4E-37 4.7E-42 316.5 19.1 238 338-600 11-261 (284)
163 2clq_A Mitogen-activated prote 100.0 7.8E-38 2.7E-42 320.0 17.3 241 339-600 28-278 (295)
164 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-38 4.6E-43 331.0 11.8 252 337-608 45-323 (326)
165 3mtl_A Cell division protein k 100.0 4.9E-38 1.7E-42 326.5 15.6 257 338-608 7-291 (324)
166 1fvr_A Tyrosine-protein kinase 100.0 2.1E-37 7E-42 322.2 20.0 251 337-610 29-303 (327)
167 3lm5_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 325.3 16.9 240 338-600 34-287 (327)
168 3eqc_A Dual specificity mitoge 100.0 1.1E-37 3.6E-42 328.9 17.7 255 338-606 38-332 (360)
169 3sv0_A Casein kinase I-like; t 100.0 1.7E-37 6E-42 338.1 19.9 250 337-608 11-279 (483)
170 3g33_A Cell division protein k 100.0 2.6E-37 8.9E-42 318.5 20.1 249 338-600 14-296 (308)
171 3ll6_A Cyclin G-associated kin 100.0 1.5E-37 5.1E-42 324.0 18.5 251 337-611 32-312 (337)
172 4aaa_A Cyclin-dependent kinase 100.0 9.1E-38 3.1E-42 325.5 16.8 249 338-600 30-306 (331)
173 1vzo_A Ribosomal protein S6 ki 100.0 5.8E-38 2E-42 330.2 15.4 239 337-600 58-321 (355)
174 2y7j_A Phosphorylase B kinase 100.0 3.3E-37 1.1E-41 325.6 21.1 244 338-600 99-359 (365)
175 3com_A Serine/threonine-protei 100.0 2.6E-37 8.9E-42 319.3 19.8 239 337-600 33-278 (314)
176 2yfx_A Tyrosine-protein kinase 100.0 2.3E-37 7.7E-42 321.9 19.4 249 337-608 34-305 (327)
177 3ttj_A Mitogen-activated prote 100.0 4.6E-37 1.6E-41 334.3 22.6 244 338-600 67-355 (464)
178 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.9E-38 3.1E-42 325.3 16.1 249 337-600 38-318 (329)
179 2a19_B Interferon-induced, dou 100.0 4.6E-38 1.6E-42 319.8 13.6 240 337-609 15-276 (284)
180 3an0_A Dual specificity mitoge 100.0 1.6E-37 5.4E-42 324.8 17.5 253 338-608 56-320 (340)
181 2jam_A Calcium/calmodulin-depe 100.0 6.1E-37 2.1E-41 315.2 21.1 239 337-600 13-261 (304)
182 3mi9_A Cell division protein k 100.0 8.7E-37 3E-41 320.7 22.6 249 338-600 22-311 (351)
183 3a7i_A MST3 kinase, serine/thr 100.0 6.1E-37 2.1E-41 315.0 20.9 235 338-601 27-271 (303)
184 3nsz_A CK II alpha, casein kin 100.0 3.8E-37 1.3E-41 320.4 19.7 245 337-600 40-319 (330)
185 2qr7_A Ribosomal protein S6 ki 100.0 1.6E-37 5.5E-42 324.8 16.8 238 338-600 27-277 (342)
186 2owb_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 321.4 19.5 235 337-600 45-291 (335)
187 3mwu_A Calmodulin-domain prote 100.0 6.8E-37 2.3E-41 335.8 22.3 237 338-600 27-276 (486)
188 3lij_A Calcium/calmodulin depe 100.0 5.1E-37 1.7E-41 337.4 21.3 243 337-605 41-298 (494)
189 2vwi_A Serine/threonine-protei 100.0 1.6E-37 5.3E-42 319.0 16.1 250 337-600 19-287 (303)
190 2vgo_A Serine/threonine-protei 100.0 2.9E-37 9.8E-42 314.3 17.9 234 338-600 19-262 (284)
191 3fme_A Dual specificity mitoge 100.0 9.9E-38 3.4E-42 318.5 14.4 251 338-606 12-274 (290)
192 2h6d_A 5'-AMP-activated protei 100.0 6.4E-37 2.2E-41 310.2 19.8 235 338-600 16-261 (276)
193 2ycf_A Serine/threonine-protei 100.0 3.5E-37 1.2E-41 319.7 18.3 240 337-600 14-274 (322)
194 2rku_A Serine/threonine-protei 100.0 2.8E-37 9.6E-42 316.1 17.3 235 337-600 19-265 (294)
195 2acx_A G protein-coupled recep 100.0 3.5E-37 1.2E-41 339.8 19.2 238 338-600 189-444 (576)
196 3kvw_A DYRK2, dual specificity 100.0 2.7E-37 9.1E-42 333.2 17.7 189 337-539 101-302 (429)
197 3nyv_A Calmodulin-domain prote 100.0 4.7E-37 1.6E-41 337.1 19.9 244 337-606 30-289 (484)
198 3n9x_A Phosphotransferase; mal 100.0 2.9E-37 1E-41 333.4 17.9 185 337-536 30-252 (432)
199 1cm8_A Phosphorylated MAP kina 100.0 1.1E-36 3.7E-41 321.8 21.7 252 338-605 30-314 (367)
200 2rio_A Serine/threonine-protei 100.0 4.8E-37 1.6E-41 331.9 19.4 249 338-600 20-295 (434)
201 3byv_A Rhoptry kinase; malaria 100.0 3.7E-38 1.3E-42 334.5 10.3 246 338-606 78-367 (377)
202 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.1E-38 2.8E-42 323.8 12.3 251 337-609 37-304 (319)
203 2w5a_A Serine/threonine-protei 100.0 3E-37 1E-41 313.2 16.1 244 338-602 11-269 (279)
204 3q5i_A Protein kinase; CDPK, m 100.0 8.3E-37 2.8E-41 336.6 20.8 237 338-600 41-301 (504)
205 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-36 4.4E-41 334.5 21.9 235 339-596 191-439 (543)
206 2j7t_A Serine/threonine-protei 100.0 5E-37 1.7E-41 315.2 17.2 243 338-600 24-275 (302)
207 1x8b_A WEE1HU, WEE1-like prote 100.0 5.2E-37 1.8E-41 312.4 17.1 237 338-600 16-279 (289)
208 1ua2_A CAK, cell division prot 100.0 5E-37 1.7E-41 321.9 17.4 249 338-600 15-291 (346)
209 2r3i_A Cell division protein k 100.0 1.3E-36 4.4E-41 311.8 20.0 250 338-600 8-283 (299)
210 2pml_X PFPK7, Ser/Thr protein 100.0 7.7E-37 2.6E-41 320.5 18.6 251 337-600 35-322 (348)
211 3pfq_A PKC-B, PKC-beta, protei 100.0 4.9E-37 1.7E-41 348.4 18.4 229 338-595 346-587 (674)
212 1u46_A ACK-1, activated CDC42 100.0 1.8E-37 6E-42 316.8 12.8 245 337-608 22-285 (291)
213 3pg1_A Mitogen-activated prote 100.0 1.7E-36 5.9E-41 319.8 20.4 249 338-600 27-316 (362)
214 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-37 4E-42 330.0 11.5 250 337-606 66-360 (371)
215 3qyz_A Mitogen-activated prote 100.0 9.7E-37 3.3E-41 322.0 18.2 248 337-600 31-313 (364)
216 2xrw_A Mitogen-activated prote 100.0 1.4E-36 4.7E-41 321.7 19.4 244 338-600 30-318 (371)
217 2x7f_A TRAF2 and NCK-interacti 100.0 9.5E-37 3.3E-41 316.8 17.0 244 337-600 28-286 (326)
218 2j0j_A Focal adhesion kinase 1 100.0 5.9E-37 2E-41 346.7 16.8 244 337-608 394-652 (656)
219 2fst_X Mitogen-activated prote 100.0 1.5E-36 5.3E-41 320.5 18.2 247 338-600 34-311 (367)
220 2i6l_A Mitogen-activated prote 100.0 2.9E-36 9.8E-41 311.9 19.8 245 338-600 16-305 (320)
221 1zy4_A Serine/threonine-protei 100.0 1.9E-36 6.3E-41 310.7 18.1 238 338-600 11-283 (303)
222 1z57_A Dual specificity protei 100.0 3.2E-36 1.1E-40 314.0 20.0 250 337-600 18-328 (339)
223 4e7w_A Glycogen synthase kinas 100.0 1E-36 3.4E-41 325.2 16.4 257 337-606 44-329 (394)
224 3e3p_A Protein kinase, putativ 100.0 1.8E-36 6E-41 319.3 17.4 261 338-607 28-323 (360)
225 2wtk_C Serine/threonine-protei 100.0 3.2E-36 1.1E-40 309.7 18.8 237 338-600 10-263 (305)
226 1phk_A Phosphorylase kinase; g 100.0 2.7E-36 9.3E-41 309.1 18.1 244 338-600 22-283 (298)
227 1wak_A Serine/threonine-protei 100.0 2.3E-36 8E-41 322.5 18.2 251 337-600 41-391 (397)
228 3eb0_A Putative uncharacterize 100.0 1.1E-36 3.7E-41 323.9 15.5 255 337-607 11-330 (383)
229 2vx3_A Dual specificity tyrosi 100.0 6E-36 2.1E-40 318.1 21.1 191 337-539 58-261 (382)
230 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-36 8.5E-41 317.3 17.8 248 337-600 15-305 (353)
231 4exu_A Mitogen-activated prote 100.0 5.7E-36 2E-40 316.9 20.4 246 338-600 47-323 (371)
232 1j1b_A Glycogen synthase kinas 100.0 1.2E-36 4.3E-41 327.2 15.5 257 337-606 58-344 (420)
233 2wei_A Calmodulin-domain prote 100.0 8.1E-36 2.8E-40 304.1 20.4 242 338-605 27-283 (287)
234 1blx_A Cyclin-dependent kinase 100.0 6E-36 2E-40 310.7 19.2 250 337-600 15-296 (326)
235 3fhr_A MAP kinase-activated pr 100.0 5.1E-36 1.8E-40 312.9 18.0 240 338-600 34-287 (336)
236 3cek_A Dual specificity protei 100.0 3.7E-36 1.3E-40 310.6 16.5 243 337-600 32-292 (313)
237 3aln_A Dual specificity mitoge 100.0 2.9E-36 9.8E-41 313.5 15.1 255 338-606 27-293 (327)
238 3p23_A Serine/threonine-protei 100.0 6E-36 2.1E-40 322.6 18.1 239 337-599 28-282 (432)
239 3coi_A Mitogen-activated prote 100.0 6.4E-36 2.2E-40 314.4 16.9 246 338-600 29-305 (353)
240 2eu9_A Dual specificity protei 100.0 1.7E-35 5.9E-40 310.7 19.4 250 337-600 23-333 (355)
241 2dyl_A Dual specificity mitoge 100.0 1.4E-35 4.9E-40 306.6 18.0 249 338-605 30-290 (318)
242 1q8y_A SR protein kinase; tran 100.0 1E-35 3.5E-40 314.9 16.1 248 337-600 23-333 (373)
243 3uqc_A Probable conserved tran 100.0 4.8E-35 1.7E-39 298.2 18.4 225 338-610 36-268 (286)
244 3a99_A Proto-oncogene serine/t 100.0 5.9E-36 2E-40 310.3 11.4 230 337-600 47-293 (320)
245 3m2w_A MAP kinase-activated pr 100.0 7.1E-35 2.4E-39 299.1 18.0 223 339-600 24-256 (299)
246 2iwi_A Serine/threonine-protei 100.0 1.3E-35 4.4E-40 306.4 11.1 230 337-600 35-283 (312)
247 3qa8_A MGC80376 protein; kinas 100.0 3.1E-35 1E-39 327.5 11.9 259 337-608 18-310 (676)
248 2pzi_A Probable serine/threoni 100.0 1.9E-34 6.5E-39 329.0 17.3 230 338-606 85-327 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 2.3E-33 7.9E-38 301.0 15.2 239 338-599 83-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.9E-33 9.9E-38 292.0 10.3 234 337-599 24-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 4.4E-28 1.5E-32 269.2 8.0 176 340-534 241-436 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 6.1E-27 2.1E-31 241.6 14.4 188 22-211 3-198 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.3E-25 4.5E-30 248.0 8.3 175 338-536 341-538 (540)
254 3rgz_A Protein brassinosteroid 99.9 2.4E-23 8.2E-28 240.8 12.5 177 21-205 8-218 (768)
255 4ecn_A Leucine-rich repeat pro 99.9 2.5E-23 8.4E-28 240.3 9.5 181 24-212 268-574 (876)
256 4eco_A Uncharacterized protein 99.9 6.6E-23 2.2E-27 231.9 10.3 184 24-212 29-331 (636)
257 1zar_A RIO2 kinase; serine kin 99.8 1.3E-21 4.4E-26 198.2 9.6 137 338-501 95-251 (282)
258 3rgz_A Protein brassinosteroid 99.8 1.9E-21 6.6E-26 224.8 11.9 120 111-232 629-750 (768)
259 4fcg_A Uncharacterized protein 99.8 1.5E-21 5.1E-26 202.5 7.0 184 22-211 24-229 (328)
260 2o6s_A Variable lymphocyte rec 99.8 6.8E-19 2.3E-23 169.9 15.8 152 52-204 3-165 (208)
261 3e6j_A Variable lymphocyte rec 99.8 9.8E-19 3.4E-23 171.5 15.3 154 47-204 12-176 (229)
262 3m19_A Variable lymphocyte rec 99.8 2E-18 6.9E-23 171.7 16.2 153 69-222 36-193 (251)
263 2v70_A SLIT-2, SLIT homolog 2 99.8 6.5E-19 2.2E-23 171.7 12.1 152 52-204 7-170 (220)
264 2v9t_B SLIT homolog 2 protein 99.8 3.2E-18 1.1E-22 166.7 13.3 156 52-222 7-166 (220)
265 1w8a_A SLIT protein; signaling 99.8 7.6E-18 2.6E-22 160.4 14.8 158 53-225 5-166 (192)
266 1zth_A RIO1 serine protein kin 99.8 1.6E-18 5.6E-23 173.1 10.5 132 338-486 52-220 (258)
267 1ogq_A PGIP-2, polygalacturona 99.8 1.4E-18 4.7E-23 178.9 9.8 159 69-230 126-312 (313)
268 2o6r_A Variable lymphocyte rec 99.7 4.3E-17 1.5E-21 153.0 13.7 138 52-204 3-141 (177)
269 3rfs_A Internalin B, repeat mo 99.7 1.3E-16 4.4E-21 160.6 18.0 153 68-222 63-219 (272)
270 2o6q_A Variable lymphocyte rec 99.7 9.6E-17 3.3E-21 161.4 16.6 139 69-208 38-178 (270)
271 2v9t_B SLIT homolog 2 protein 99.7 8.9E-17 3E-21 156.5 15.8 135 68-203 32-168 (220)
272 2v70_A SLIT-2, SLIT homolog 2 99.7 1.2E-16 4.1E-21 155.6 16.4 156 59-222 7-167 (220)
273 2xot_A Amphoterin-induced prot 99.7 1.4E-17 4.9E-22 174.9 9.8 171 52-223 14-204 (361)
274 3m19_A Variable lymphocyte rec 99.7 1.2E-16 4E-21 159.0 13.1 135 68-203 59-195 (251)
275 1p9a_G Platelet glycoprotein I 99.7 3E-16 1E-20 159.5 16.2 131 69-202 32-163 (290)
276 2o6q_A Variable lymphocyte rec 99.7 6.6E-16 2.2E-20 155.3 17.6 154 68-222 61-219 (270)
277 3e6j_A Variable lymphocyte rec 99.7 8.9E-16 3E-20 150.4 17.2 156 58-222 14-173 (229)
278 2z66_A Variable lymphocyte rec 99.7 1.6E-16 5.4E-21 162.8 12.3 158 52-210 3-174 (306)
279 3rfs_A Internalin B, repeat mo 99.7 8.7E-16 3E-20 154.6 16.4 137 68-205 85-223 (272)
280 4fcg_A Uncharacterized protein 99.7 1.4E-16 4.9E-21 164.9 10.5 142 68-212 127-278 (328)
281 2wfh_A SLIT homolog 2 protein 99.7 4.6E-16 1.6E-20 148.1 13.1 126 75-203 17-142 (193)
282 2z80_A TOLL-like receptor 2, v 99.7 2.7E-16 9.4E-21 164.5 11.4 155 54-210 28-197 (353)
283 3v47_A TOLL-like receptor 5B a 99.6 2.6E-16 8.8E-21 170.5 11.1 158 53-210 7-177 (455)
284 1ozn_A Reticulon 4 receptor; N 99.6 1.1E-15 3.6E-20 154.9 14.8 143 68-211 56-201 (285)
285 2z62_A TOLL-like receptor 4, v 99.6 5.1E-16 1.8E-20 156.5 12.2 140 68-208 28-170 (276)
286 2z81_A CD282 antigen, TOLL-lik 99.6 2.8E-16 9.7E-21 174.4 11.2 153 57-211 5-172 (549)
287 3oja_B Anopheles plasmodium-re 99.6 4.6E-16 1.6E-20 174.6 12.3 149 69-218 52-202 (597)
288 2o6s_A Variable lymphocyte rec 99.6 5.3E-15 1.8E-19 142.4 17.9 148 72-222 11-162 (208)
289 2z66_A Variable lymphocyte rec 99.6 7.3E-16 2.5E-20 157.8 12.3 141 68-209 78-221 (306)
290 1ozn_A Reticulon 4 receptor; N 99.6 2.5E-15 8.4E-20 152.2 15.8 143 68-211 32-177 (285)
291 3zyi_A Leucine-rich repeat-con 99.6 1.9E-15 6.6E-20 163.6 15.7 152 57-209 55-264 (452)
292 3o6n_A APL1; leucine-rich repe 99.6 5.5E-16 1.9E-20 164.5 11.0 141 69-210 46-188 (390)
293 2ell_A Acidic leucine-rich nuc 99.6 4.8E-16 1.6E-20 144.4 8.5 136 68-205 24-164 (168)
294 4b8c_D Glucose-repressible alc 99.6 1.4E-16 4.6E-21 182.2 5.3 178 24-208 131-337 (727)
295 1p9a_G Platelet glycoprotein I 99.6 3.2E-15 1.1E-19 151.8 14.3 152 68-222 55-209 (290)
296 4g8a_A TOLL-like receptor 4; l 99.6 1.6E-15 5.3E-20 171.1 12.8 141 68-209 52-195 (635)
297 2id5_A Lingo-1, leucine rich r 99.6 2E-15 6.7E-20 164.7 12.7 153 57-210 12-175 (477)
298 3j0a_A TOLL-like receptor 5; m 99.6 3.6E-16 1.2E-20 182.6 6.9 134 87-223 422-562 (844)
299 3vq2_A TLR4, TOLL-like recepto 99.6 4.1E-15 1.4E-19 167.2 14.1 141 68-209 32-175 (606)
300 2xwt_C Thyrotropin receptor; s 99.6 1.8E-15 6.2E-20 149.1 9.8 150 53-206 7-174 (239)
301 3zyj_A Leucine-rich repeat-con 99.6 6.6E-15 2.3E-19 158.8 14.9 149 57-208 44-252 (440)
302 4gyi_A RIO2 kinase; protein ki 99.6 5.3E-16 1.8E-20 161.3 5.8 132 338-485 100-265 (397)
303 3v47_A TOLL-like receptor 5B a 99.6 3.8E-15 1.3E-19 161.3 12.4 140 68-208 239-392 (455)
304 3vq2_A TLR4, TOLL-like recepto 99.6 3.2E-15 1.1E-19 168.0 12.2 139 69-208 377-518 (606)
305 1w8a_A SLIT protein; signaling 99.6 1.3E-14 4.4E-19 138.0 14.2 126 94-222 11-140 (192)
306 2je0_A Acidic leucine-rich nuc 99.6 9.9E-16 3.4E-20 139.2 5.6 126 69-195 18-148 (149)
307 4ezg_A Putative uncharacterize 99.6 4.6E-15 1.6E-19 141.6 10.2 129 69-201 45-173 (197)
308 4g8a_A TOLL-like receptor 4; l 99.6 1.5E-14 5.2E-19 163.0 14.6 134 75-211 38-173 (635)
309 1ziw_A TOLL-like receptor 3; i 99.6 9.7E-15 3.3E-19 166.5 12.0 139 68-207 25-165 (680)
310 3j0a_A TOLL-like receptor 5; m 99.5 1.1E-14 3.7E-19 170.1 12.2 151 56-208 14-169 (844)
311 2z62_A TOLL-like receptor 4, v 99.5 1.9E-14 6.3E-19 145.0 12.4 136 68-204 52-194 (276)
312 2z63_A TOLL-like receptor 4, v 99.5 1.3E-14 4.4E-19 161.7 12.1 139 71-210 376-517 (570)
313 3t6q_A CD180 antigen; protein- 99.5 1E-14 3.5E-19 163.9 11.4 154 58-212 14-178 (606)
314 1wwl_A Monocyte differentiatio 99.5 5.2E-15 1.8E-19 152.0 8.1 135 69-203 96-244 (312)
315 3g39_A Variable lymphocyte rec 99.5 3.9E-14 1.3E-18 131.8 12.6 106 95-203 13-118 (170)
316 3oja_A Leucine-rich immune mol 99.5 7.2E-15 2.5E-19 160.4 8.7 115 89-208 118-234 (487)
317 4eco_A Uncharacterized protein 99.5 2.8E-15 9.6E-20 169.3 5.5 137 69-209 207-374 (636)
318 3cvr_A Invasion plasmid antige 99.5 1.3E-14 4.3E-19 160.4 10.5 139 46-205 35-177 (571)
319 1xku_A Decorin; proteoglycan, 99.5 4.9E-14 1.7E-18 145.8 14.2 149 53-206 28-189 (330)
320 4ezg_A Putative uncharacterize 99.5 1.7E-14 5.8E-19 137.7 9.4 129 68-201 66-195 (197)
321 2ft3_A Biglycan; proteoglycan, 99.5 5.2E-14 1.8E-18 145.8 13.6 148 53-206 30-190 (332)
322 2je0_A Acidic leucine-rich nuc 99.5 1.2E-14 4.3E-19 131.9 7.4 113 89-204 15-130 (149)
323 2wfh_A SLIT homolog 2 protein 99.5 1E-13 3.5E-18 131.8 14.0 125 94-222 13-140 (193)
324 2xot_A Amphoterin-induced prot 99.5 6.8E-14 2.3E-18 146.8 14.0 138 59-204 14-153 (361)
325 4glp_A Monocyte differentiatio 99.5 9.9E-15 3.4E-19 149.8 7.0 138 68-207 117-270 (310)
326 2r9u_A Variable lymphocyte rec 99.5 8.4E-14 2.9E-18 130.0 12.7 105 95-202 16-120 (174)
327 2id5_A Lingo-1, leucine rich r 99.5 4.7E-14 1.6E-18 153.7 12.4 143 68-211 56-200 (477)
328 1ziw_A TOLL-like receptor 3; i 99.5 8E-14 2.7E-18 158.8 14.9 138 85-223 474-624 (680)
329 1wwl_A Monocyte differentiatio 99.5 7.9E-15 2.7E-19 150.6 5.8 110 89-200 93-214 (312)
330 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1.3E-13 4.5E-18 153.4 16.0 138 68-210 353-496 (562)
331 1xku_A Decorin; proteoglycan, 99.5 1.3E-13 4.3E-18 142.7 14.6 138 68-210 121-262 (330)
332 2xwt_C Thyrotropin receptor; s 99.5 3.2E-14 1.1E-18 140.1 9.6 139 68-210 55-203 (239)
333 3oja_B Anopheles plasmodium-re 99.5 1E-13 3.4E-18 155.5 14.6 110 69-179 76-187 (597)
334 4b8c_D Glucose-repressible alc 99.5 3.2E-15 1.1E-19 170.9 2.3 140 68-210 224-364 (727)
335 4ecn_A Leucine-rich repeat pro 99.5 1.2E-14 4.2E-19 167.8 6.7 141 68-212 448-619 (876)
336 1a9n_A U2A', U2A'; complex (nu 99.5 2.1E-14 7.1E-19 134.4 7.1 128 69-200 20-153 (176)
337 2ell_A Acidic leucine-rich nuc 99.5 5.6E-14 1.9E-18 130.3 9.7 121 88-211 21-147 (168)
338 2z63_A TOLL-like receptor 4, v 99.5 6.4E-14 2.2E-18 156.1 12.0 136 69-205 397-536 (570)
339 3oja_A Leucine-rich immune mol 99.5 2.9E-14 1E-18 155.6 8.8 148 57-210 110-261 (487)
340 3g39_A Variable lymphocyte rec 99.5 1.4E-13 4.8E-18 128.0 11.8 105 73-180 14-119 (170)
341 3t6q_A CD180 antigen; protein- 99.5 2.3E-13 7.8E-18 152.9 15.7 144 69-212 255-401 (606)
342 2z7x_B TOLL-like receptor 1, v 99.5 7.7E-14 2.6E-18 153.7 11.4 136 69-208 303-441 (520)
343 2o6r_A Variable lymphocyte rec 99.5 5.8E-13 2E-17 124.6 15.2 127 93-222 9-138 (177)
344 1xeu_A Internalin C; cellular 99.5 3.8E-13 1.3E-17 134.5 14.4 124 69-202 42-165 (263)
345 1h6t_A Internalin B; cell adhe 99.5 2.2E-13 7.5E-18 138.3 12.7 124 69-201 69-192 (291)
346 3o6n_A APL1; leucine-rich repe 99.5 3.9E-13 1.3E-17 142.5 14.7 110 68-178 69-180 (390)
347 4glp_A Monocyte differentiatio 99.5 2E-14 7E-19 147.4 4.5 142 69-210 92-247 (310)
348 1dce_A Protein (RAB geranylger 99.5 1.3E-13 4.3E-18 152.9 11.0 109 92-205 442-551 (567)
349 1h6u_A Internalin H; cell adhe 99.5 3.3E-13 1.1E-17 138.2 13.1 128 68-204 63-190 (308)
350 1h6t_A Internalin B; cell adhe 99.5 3.8E-13 1.3E-17 136.6 13.2 128 68-204 46-173 (291)
351 1dce_A Protein (RAB geranylger 99.4 1.4E-13 4.7E-18 152.7 10.4 122 69-194 442-567 (567)
352 1xeu_A Internalin C; cellular 99.4 4.9E-13 1.7E-17 133.6 13.0 125 68-202 63-187 (263)
353 3zyj_A Leucine-rich repeat-con 99.4 3.9E-13 1.3E-17 144.9 13.1 153 68-223 136-294 (440)
354 3zyi_A Leucine-rich repeat-con 99.4 3.5E-13 1.2E-17 145.8 12.8 153 68-223 147-305 (452)
355 1h6u_A Internalin H; cell adhe 99.4 3.6E-13 1.2E-17 137.9 12.2 125 69-202 42-166 (308)
356 2z7x_B TOLL-like receptor 1, v 99.4 9.4E-14 3.2E-18 153.0 8.3 137 68-211 21-164 (520)
357 1m9s_A Internalin B; cell inva 99.4 6.4E-13 2.2E-17 148.2 14.9 126 68-202 65-190 (605)
358 2ft3_A Biglycan; proteoglycan, 99.4 3.2E-13 1.1E-17 139.9 11.3 138 68-207 123-284 (332)
359 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 3.5E-13 1.2E-17 150.1 12.1 133 69-208 53-192 (562)
360 2z80_A TOLL-like receptor 2, v 99.4 9E-13 3.1E-17 137.7 14.3 146 58-210 25-173 (353)
361 2z81_A CD282 antigen, TOLL-lik 99.4 8E-13 2.8E-17 146.5 14.3 142 62-210 3-147 (549)
362 4fmz_A Internalin; leucine ric 99.4 5.8E-13 2E-17 138.7 12.1 131 69-208 178-308 (347)
363 3o53_A Protein LRIM1, AGAP0063 99.4 1.9E-13 6.4E-18 140.7 8.1 114 90-208 119-234 (317)
364 3o53_A Protein LRIM1, AGAP0063 99.4 1.9E-13 6.4E-18 140.7 6.7 138 68-210 120-261 (317)
365 1m9s_A Internalin B; cell inva 99.4 9.3E-13 3.2E-17 146.9 12.5 128 68-204 87-214 (605)
366 1o6v_A Internalin A; bacterial 99.4 9.1E-13 3.1E-17 143.1 12.1 128 68-204 243-370 (466)
367 2r9u_A Variable lymphocyte rec 99.4 2.1E-12 7.1E-17 120.5 12.7 106 71-179 15-121 (174)
368 2ifg_A High affinity nerve gro 99.4 1.2E-12 4.2E-17 136.3 11.7 111 53-177 4-117 (347)
369 1o6v_A Internalin A; bacterial 99.4 1.4E-12 4.7E-17 141.7 12.4 126 68-202 221-346 (466)
370 4fmz_A Internalin; leucine ric 99.4 8.7E-13 3E-17 137.3 10.3 144 68-218 199-343 (347)
371 3cvr_A Invasion plasmid antige 99.4 7.8E-13 2.7E-17 146.0 10.1 124 68-211 100-230 (571)
372 1a9n_A U2A', U2A'; complex (nu 99.4 9.3E-13 3.2E-17 123.1 9.0 115 85-205 13-130 (176)
373 3bz5_A Internalin-J, INLJ; leu 99.4 1.8E-12 6.3E-17 140.1 12.5 126 69-204 149-281 (457)
374 1ds9_A Outer arm dynein; leuci 99.4 1.8E-15 6.3E-20 144.5 -10.7 131 70-205 20-158 (198)
375 2ifg_A High affinity nerve gro 99.4 2E-12 7E-17 134.6 11.1 106 95-203 12-119 (347)
376 3bz5_A Internalin-J, INLJ; leu 99.3 7.8E-12 2.7E-16 135.2 15.3 123 68-204 106-228 (457)
377 1jl5_A Outer protein YOPM; leu 99.3 1.3E-11 4.5E-16 133.3 15.4 120 69-204 112-231 (454)
378 4ay9_X Follicle-stimulating ho 99.3 3.4E-12 1.2E-16 133.1 10.2 147 54-201 7-168 (350)
379 2ast_B S-phase kinase-associat 99.3 1.5E-13 5E-18 142.5 -1.1 145 57-206 38-189 (336)
380 1jl5_A Outer protein YOPM; leu 99.3 2.4E-11 8.4E-16 131.2 14.5 135 68-218 91-225 (454)
381 3g06_A SSPH2 (leucine-rich rep 99.3 1.2E-11 4.2E-16 138.1 11.7 64 138-211 221-284 (622)
382 3g06_A SSPH2 (leucine-rich rep 99.2 4.1E-12 1.4E-16 142.0 6.9 137 45-201 13-155 (622)
383 2ca6_A RAN GTPase-activating p 99.2 1.9E-12 6.4E-17 137.0 1.3 139 68-207 122-298 (386)
384 2ast_B S-phase kinase-associat 99.2 4.5E-13 1.6E-17 138.7 -3.8 137 68-205 70-216 (336)
385 1ds9_A Outer arm dynein; leuci 99.2 1.3E-13 4.6E-18 131.5 -8.7 127 68-200 48-185 (198)
386 2ca6_A RAN GTPase-activating p 99.1 1.4E-12 4.9E-17 137.9 -3.9 133 69-202 95-259 (386)
387 3tm0_A Aminoglycoside 3'-phosp 99.1 2.6E-10 9E-15 113.5 12.1 134 339-483 20-212 (263)
388 3goz_A Leucine-rich repeat-con 99.1 5.4E-12 1.9E-16 132.2 -1.2 136 69-205 23-185 (362)
389 3goz_A Leucine-rich repeat-con 99.1 6.9E-12 2.4E-16 131.4 -0.6 131 73-204 3-155 (362)
390 1nd4_A Aminoglycoside 3'-phosp 99.1 3.1E-10 1E-14 112.6 10.8 129 342-484 29-214 (264)
391 4ay9_X Follicle-stimulating ho 99.0 9.5E-10 3.2E-14 114.5 10.4 126 73-201 14-143 (350)
392 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6.3E-14 112.7 11.3 138 339-484 44-248 (359)
393 1z7x_W Ribonuclease inhibitor; 98.9 1.7E-11 5.8E-16 132.6 -5.5 138 69-207 228-394 (461)
394 1z7x_W Ribonuclease inhibitor; 98.9 4.9E-11 1.7E-15 129.0 -5.5 133 69-202 171-328 (461)
395 3rw6_A Nuclear RNA export fact 98.8 2.2E-11 7.4E-16 120.6 -8.9 144 57-204 79-237 (267)
396 3un9_A NLR family member X1; l 98.8 1.4E-10 4.7E-15 121.7 -3.4 133 69-202 102-254 (372)
397 3sg8_A APH(2'')-ID; antibiotic 98.7 5.2E-09 1.8E-13 106.6 5.4 187 339-536 26-287 (304)
398 3un9_A NLR family member X1; l 98.7 5.9E-10 2E-14 116.9 -4.8 133 69-202 73-226 (372)
399 3sb4_A Hypothetical leucine ri 98.6 2.2E-07 7.4E-12 95.6 11.3 89 113-204 225-314 (329)
400 3ogk_B Coronatine-insensitive 98.5 5.6E-09 1.9E-13 116.5 -2.1 89 113-201 435-527 (592)
401 3r70_A Aminoglycoside phosphot 98.5 2.7E-07 9.1E-12 94.6 10.2 132 338-484 42-237 (320)
402 3rw6_A Nuclear RNA export fact 98.4 8.9E-08 3E-12 94.6 3.9 80 111-193 167-257 (267)
403 1io0_A Tropomodulin; LRR prote 98.4 2.1E-08 7E-13 94.2 -1.6 115 85-200 30-164 (185)
404 3sb4_A Hypothetical leucine ri 98.4 8E-07 2.7E-11 91.3 10.1 102 90-194 225-328 (329)
405 3tdw_A Gentamicin resistance p 98.3 2.5E-06 8.6E-11 86.7 12.4 135 339-484 25-224 (306)
406 3d1u_A Putative fructosamine-3 98.3 1.9E-06 6.3E-11 86.8 8.8 72 339-414 21-97 (288)
407 4gkh_A Aminoglycoside 3'-phosp 98.2 6.7E-06 2.3E-10 81.7 11.2 133 341-483 32-222 (272)
408 2p1m_B Transport inhibitor res 98.2 1E-07 3.6E-12 106.2 -2.4 109 90-200 371-494 (594)
409 3ogk_B Coronatine-insensitive 98.1 9.2E-07 3.1E-11 98.5 2.5 126 68-195 192-326 (592)
410 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.5E-05 5E-10 83.0 10.6 142 339-484 47-243 (362)
411 3ats_A Putative uncharacterize 98.0 7.1E-06 2.4E-10 85.1 7.8 77 339-415 26-121 (357)
412 1io0_A Tropomodulin; LRR prote 98.0 4.5E-07 1.5E-11 85.0 -1.5 108 68-176 36-164 (185)
413 2ra8_A Uncharacterized protein 98.0 1.3E-06 4.4E-11 90.8 0.8 132 69-202 140-294 (362)
414 2p1m_B Transport inhibitor res 97.9 6.8E-07 2.3E-11 99.6 -2.2 125 69-196 106-244 (594)
415 2ra8_A Uncharacterized protein 97.9 4.7E-06 1.6E-10 86.5 4.1 37 112-151 170-206 (362)
416 4fdw_A Leucine rich hypothetic 97.8 6.5E-05 2.2E-09 79.2 11.2 124 69-197 204-333 (401)
417 2q83_A YTAA protein; 2635576, 97.8 7E-05 2.4E-09 76.8 10.5 141 340-483 39-251 (346)
418 4fdw_A Leucine rich hypothetic 97.8 0.00012 4.1E-09 77.2 12.3 111 85-200 174-284 (401)
419 2olc_A MTR kinase, methylthior 97.6 0.00027 9.1E-09 74.4 11.0 72 339-412 36-120 (397)
420 3jr1_A Putative fructosamine-3 97.5 0.00045 1.5E-08 69.9 11.6 139 339-480 42-232 (312)
421 3f7w_A Putative fructosamine-3 97.3 0.0014 4.9E-08 65.4 12.1 72 339-414 21-97 (288)
422 2pyw_A Uncharacterized protein 97.2 0.0014 4.9E-08 69.3 10.9 76 453-533 231-313 (420)
423 3rfe_A Platelet glycoprotein I 97.1 0.00079 2.7E-08 58.6 6.5 56 118-176 12-68 (130)
424 1zyl_A Hypothetical protein YI 97.1 0.0042 1.5E-07 63.1 12.8 142 340-484 33-223 (328)
425 2ppq_A HSK, HK, homoserine kin 97.1 0.0023 8E-08 64.8 10.8 144 339-483 28-216 (322)
426 3e4g_A ATP synthase subunit S, 97.0 0.00016 5.4E-09 66.2 1.2 81 92-173 62-149 (176)
427 3e4g_A ATP synthase subunit S, 96.9 0.00012 4.2E-09 67.0 -0.8 81 69-149 62-150 (176)
428 3rfe_A Platelet glycoprotein I 96.8 0.0024 8.1E-08 55.5 6.7 55 95-151 12-68 (130)
429 4gt6_A Cell surface protein; l 96.7 0.0046 1.6E-07 64.7 9.8 111 85-199 259-369 (394)
430 3csv_A Aminoglycoside phosphot 96.7 0.011 3.8E-07 60.1 12.4 32 453-484 182-217 (333)
431 3dxq_A Choline/ethanolamine ki 96.7 0.0038 1.3E-07 62.7 8.6 69 339-414 24-95 (301)
432 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00031 1.1E-08 65.6 -0.6 114 86-200 36-170 (197)
433 4gt6_A Cell surface protein; l 96.5 0.01 3.4E-07 62.1 10.8 84 109-196 260-343 (394)
434 4fs7_A Uncharacterized protein 96.4 0.011 3.7E-07 61.9 10.5 84 110-197 293-376 (394)
435 4h09_A Hypothetical leucine ri 96.3 0.022 7.6E-07 59.0 11.6 107 86-195 212-318 (379)
436 1nw1_A Choline kinase (49.2 KD 96.2 0.013 4.4E-07 62.1 9.7 70 340-413 80-158 (429)
437 3feg_A Choline/ethanolamine ki 96.1 0.025 8.7E-07 58.6 10.7 140 340-483 57-253 (379)
438 3c5i_A Choline kinase; choline 96.0 0.0097 3.3E-07 61.6 7.4 70 340-413 40-120 (369)
439 2yle_A Protein spire homolog 1 96.0 0.029 9.8E-07 52.7 9.6 102 412-534 33-134 (229)
440 3i1a_A Spectinomycin phosphotr 95.7 0.038 1.3E-06 56.4 10.2 32 453-484 205-236 (339)
441 4h09_A Hypothetical leucine ri 95.7 0.1 3.5E-06 53.9 13.4 106 85-194 234-340 (379)
442 2qg7_A Ethanolamine kinase PV0 95.4 0.067 2.3E-06 56.9 10.8 72 339-414 114-188 (458)
443 4fs7_A Uncharacterized protein 95.3 0.032 1.1E-06 58.1 8.0 101 86-192 292-393 (394)
444 1pgv_A TMD-1, tropomodulin TMD 95.2 0.0064 2.2E-07 56.6 2.1 86 111-197 38-136 (197)
445 3mes_A Choline kinase; malaria 91.3 0.51 1.7E-05 49.5 8.7 71 340-414 77-157 (424)
446 3f2s_A CK, chetk-alpha, cholin 91.2 1.2 4E-05 46.3 11.3 31 453-483 243-279 (401)
447 3g15_A CK, chetk-alpha, cholin 84.0 3.2 0.00011 43.0 9.2 29 456-484 246-280 (401)
448 4ann_A ESSB; membrane protein, 83.4 2.2 7.4E-05 39.9 6.7 122 378-537 37-158 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 81.2 0.22 7.4E-06 53.1 -1.2 56 339-397 148-214 (463)
450 4ano_A ESSB; membrane protein, 79.8 7.3 0.00025 36.4 8.9 114 385-537 48-163 (219)
451 2ks1_B Epidermal growth factor 77.9 0.29 9.9E-06 33.0 -0.9 12 270-281 29-40 (44)
452 2l2t_A Receptor tyrosine-prote 76.1 0.31 1E-05 32.8 -1.2 12 270-281 28-39 (44)
453 2jwa_A Receptor tyrosine-prote 47.8 1.7 5.9E-05 29.1 -1.7 6 275-280 34-39 (44)
454 2k1k_A Ephrin type-A receptor 43.2 2.7 9.3E-05 27.2 -1.3 7 272-278 31-37 (38)
455 2klu_A T-cell surface glycopro 36.1 8.1 0.00028 28.0 0.2 20 256-275 12-31 (70)
456 1cja_A Protein (actin-fragmin 20.5 4E+02 0.014 26.3 9.2 78 401-485 156-238 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.8e-53 Score=432.12 Aligned_cols=248 Identities=24% Similarity=0.388 Sum_probs=198.2
Q ss_pred hccccccCcceEEEEEeC------CCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 338 AELLGKGCVGATYKVVLD------GGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
.+.||+|+||+||+|++. ++..||||+++.. ...++|.+|++++++++|||||+++|+|.+++..|||||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 568999999999999864 3678999999765 33567999999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCC--------CCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCc
Q 006559 410 PHGSLHSLLHGSR--------GPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV 481 (640)
Q Consensus 410 ~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 481 (640)
++|+|.++|+... ......++|.++++|+.|||+||+|||+ .+||||||||+||||++++.+||+|||+
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGl 174 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGM 174 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCccc
Confidence 9999999997542 1223469999999999999999999995 4599999999999999999999999999
Q ss_pred ccccCC--------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhc
Q 006559 482 HQLFHT--------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQ 552 (640)
Q Consensus 482 ~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 552 (640)
++.... ...+|..|||||++ ....|+.|+|||||||++|||+| |+.||.+... .+.+.....
T Consensus 175 a~~~~~~~~~~~~~~~~gt~~ymAPE~~-------~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~i~~ 245 (299)
T 4asz_A 175 SRDVYSTDYYRVGGHTMLPIRWMPPESI-------MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIECITQ 245 (299)
T ss_dssp HHHHTGGGCEEETTTEEECGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHHHH
T ss_pred ceecCCCCceeecCceecChhhcCHHHH-------cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHc
Confidence 986532 12457889999964 45678899999999999999999 8999975332 222222211
Q ss_pred ccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 553 DESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 553 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
... ...+. .+..++.+++.+||+.||++||||.+|++.|+++...
T Consensus 246 ~~~--------~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 246 GRV--------LQRPR---TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp TCC--------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC--------CCCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 110 01111 2234577788899999999999999999999998753
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.2e-52 Score=434.31 Aligned_cols=248 Identities=25% Similarity=0.374 Sum_probs=196.0
Q ss_pred hccccccCcceEEEEEeC------CCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 338 AELLGKGCVGATYKVVLD------GGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
.++||+|+||+||+|++. ++..||||+++.. ...++|.+|++++++++|||||+++|+|.+.+..|||||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 568999999999999875 3678999999865 33567999999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCC----------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccC
Q 006559 410 PHGSLHSLLHGSRGP----------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDI 479 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 479 (640)
++|+|.++++..... ...+++|.++++|+.|||+||+|||+ .+||||||||+||||++++.+||+||
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki~DF 202 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDF 202 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEEccc
Confidence 999999999764321 12369999999999999999999995 45999999999999999999999999
Q ss_pred CcccccCC--------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHh
Q 006559 480 GVHQLFHT--------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMM 550 (640)
Q Consensus 480 Gl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~ 550 (640)
|+++.... ...+|..|||||++ ....++.++|||||||+||||+| |+.||.+... .+.+...
T Consensus 203 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~-------~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~i 273 (329)
T 4aoj_A 203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESI-------LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAIDCI 273 (329)
T ss_dssp C----------------CCCCGGGCCHHHH-------TTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HHHHHHH
T ss_pred ccceeccCCCcceecCcccccccccChhhh-------cCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 99986532 23468899999964 45678899999999999999999 8999975322 2222222
Q ss_pred hcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 551 GQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 551 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..... +..+. .+..++.+++.+||+.||++||||.||++.|+.+...
T Consensus 274 ~~g~~--------~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 274 TQGRE--------LERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHTCC--------CCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HcCCC--------CCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11110 11111 2234567788899999999999999999999998754
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.1e-53 Score=432.48 Aligned_cols=245 Identities=23% Similarity=0.345 Sum_probs=197.1
Q ss_pred hccccccCcceEEEEEeC------CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEec
Q 006559 338 AELLGKGCVGATYKVVLD------GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~------~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
.+.||+|+||+||+|++. +++.||||+++.. ...++|.+|+.++++++|||||+++|+|.+.+..+|||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 567999999999999973 4578999999755 3357899999999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCC-----------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEc
Q 006559 409 LPHGSLHSLLHGSRGP-----------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACIS 477 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~ 477 (640)
|++|+|.++|+..... ....++|..+++|+.|||+||+|||+. +||||||||+||||++++.+||+
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki~ 187 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKIS 187 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEEC
Confidence 9999999999754311 123589999999999999999999954 59999999999999999999999
Q ss_pred cCCcccccCC--------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHH
Q 006559 478 DIGVHQLFHT--------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQ 548 (640)
Q Consensus 478 DfGl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~ 548 (640)
|||+++.... ...+|..|||||++ ....|+.++|||||||+||||+| |+.||.+... .+.++
T Consensus 188 DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l-------~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~ 258 (308)
T 4gt4_A 188 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAI-------MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVE 258 (308)
T ss_dssp CSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHH
T ss_pred CcccceeccCCCceeEecccccCCcccCHHHH-------hCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHH
Confidence 9999986532 23467899999964 45678899999999999999999 8999975332 22222
Q ss_pred HhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 006559 549 MMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDI 605 (640)
Q Consensus 549 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i 605 (640)
.+..... ...+. ++..++.+++.+||+.||++||||.||++.|+.+
T Consensus 259 ~i~~~~~--------~~~p~---~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 MIRNRQV--------LPCPD---DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHTTCC--------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcCCC--------CCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2221110 01111 2334577888999999999999999999999865
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-52 Score=427.00 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=194.3
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||+||+|++++ .||||.++.. ...+.|.+|++++++++|||||+++|+|.+ +.+|||||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence 5689999999999999764 5899998743 234568899999999999999999999864 57899999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------ 487 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------ 487 (640)
|.++|+.... +++|..++.|+.|||+||+|||+ .+||||||||+||||++++.+||+|||+++....
T Consensus 118 L~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 118 LYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp HHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred HHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 9999976532 58999999999999999999995 4599999999999999999999999999986532
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHHHHhhcccccccccchhh
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|+.|||||++... ....|+.|+|||||||+||||+||+.||.+.... ..... ..... ..+.+
T Consensus 191 ~~~~~GT~~ymAPE~l~~~----~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~--~~~~~-----~~p~~ 259 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQ----DNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM--VGRGY-----ASPDL 259 (307)
T ss_dssp ---CCCCTTSCCHHHHHCC----SSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH--HHTTC-----CCCCS
T ss_pred ecccccCCCccCHHHhhcc----CCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH--HhcCC-----CCCCc
Confidence 23579999999976422 2345889999999999999999999999753221 11111 11110 01110
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. ....++..++.+++.+||+.||++||||.||++.|+.++..
T Consensus 260 ~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 S--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp T--TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred c--cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 0 00112334577788899999999999999999999988743
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-52 Score=430.31 Aligned_cols=260 Identities=26% Similarity=0.337 Sum_probs=197.3
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccch-HHHHHHHHHHhccCCCcccceeEEEEcCC----eEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKKK-REVDEWLRVIGGLRHSNIVSIRAYCNGKD----ELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lV~Ey~~~g 412 (640)
.+.||+|+||+||+|+++ |+.||||++...... ..++.|+..+.+++|||||+++|+|..++ .+|||||||++|
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 568999999999999984 789999999765332 22345677778899999999999998653 689999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcC-----CCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGY-----NKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
+|.++++.. +++|..+.+++.|+|+||+|||+. ..++||||||||+|||||.++.+||+|||+++....
T Consensus 87 sL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 87 SLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp BHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 999999854 489999999999999999999975 245799999999999999999999999999986532
Q ss_pred ----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-------------H
Q 006559 488 ----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI-------------V 544 (640)
Q Consensus 488 ----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~-------------~ 544 (640)
...+|..|||||++.+... .....++.|+|||||||+||||+||+.|+....... .
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~-~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSIN-MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSC-TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCceeeecccccccccccCHHHhccccc-ccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 1357999999998754321 122346789999999999999999988775322111 1
Q ss_pred HHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 545 KWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
...+.... ...++.+.......+....+.+++.+||+.||++||||.||++.|+++..+.+
T Consensus 240 ~~~~~~~~-----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 240 EMRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHHHHTT-----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHhc-----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 11111111 11122221111223456678899999999999999999999999999986643
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.8e-50 Score=412.16 Aligned_cols=241 Identities=18% Similarity=0.217 Sum_probs=193.0
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHHH
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLHS 416 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~ 416 (640)
.+.||+|+||+||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+.+.+|||||||++|+|.+
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~ 139 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 139 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence 46799999999999996 4689999999975432 2468999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC-CeEEccCCcccccCC--------
Q 006559 417 LLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG-NACISDIGVHQLFHT-------- 487 (640)
Q Consensus 417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGl~~~~~~-------- 487 (640)
+++... ++++.....++.||+.||+|||+ .+||||||||+||||+.++ .+||+|||+++.+..
T Consensus 140 ~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 140 LIKQMG-----CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp HHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 997643 58999999999999999999995 5599999999999999988 699999999987532
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHHHHhhcccccccccchh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~ 563 (640)
..++|+.|||||++. ...|+.++|||||||++|||+||+.||.+.... +...+.. ......
T Consensus 212 ~~~~~~GT~~YmAPE~~~-------~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--~~~~~~------ 276 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVM-------GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--EPPPIR------ 276 (336)
T ss_dssp --CCCCCCGGGCCHHHHT-------TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--SCCGGG------
T ss_pred cCCccccCccccCHHHHC-------CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--CCCCch------
Confidence 135799999999753 356788999999999999999999999753322 2211111 110000
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..++.. ...+.+++.+||+.||++|||+.|+++.|......
T Consensus 277 -~~~~~~---s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 277 -EIPPSC---APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp -GSCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -hcCccC---CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 011222 23456677889999999999999999998886643
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3e-49 Score=400.49 Aligned_cols=238 Identities=21% Similarity=0.329 Sum_probs=187.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEc----CCeEEEEEec
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNG----KDELFLVYDY 408 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lV~Ey 408 (640)
.++||+|+||+||+|+.. ++..||||++.... ..+.+.+|++++++++|||||+++++|.. ++.+||||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 457999999999999964 57889999997542 24568899999999999999999999865 3468999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC-CCCCeEEccCCcccccCC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIGVHQLFHT 487 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGl~~~~~~ 487 (640)
|++|+|.++++... ++++..+..++.||+.||+|||+.+ ++||||||||+||||+ .++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999997643 5899999999999999999999643 4599999999999998 479999999999986543
Q ss_pred ----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 488 ----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
..++|+.|||||++. ..|+.++|||||||++|||+||+.||.+... .....+......... .
T Consensus 185 ~~~~~~~GTp~YmAPE~~~--------~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~~~~~i~~~~~~~-----~ 250 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYE--------EKYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRVTSGVKPA-----S 250 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG--------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHHTTTCCCG-----G
T ss_pred CccCCcccCccccCHHHcC--------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHHHHHHHHcCCCCC-----C
Confidence 346799999999752 3578999999999999999999999975322 222222222111000 0
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.+.. ...++.+++.+||+.||++|||+.|+++
T Consensus 251 --~~~~---~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 --FDKV---AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GGGC---CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCcc---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111 1124667788899999999999999864
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.5e-49 Score=409.12 Aligned_cols=236 Identities=19% Similarity=0.299 Sum_probs=190.9
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.+.||+|+||+||+|+.. +|+.||||++... ...+.+.+|++++++++|||||+++++|.+++.+|||||||++|+|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 457999999999999964 6899999999654 3445688999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------C
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------P 488 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------~ 488 (640)
.+++... .+++.....++.||+.||+|||+. +||||||||+||||+.++.+||+|||+++.+.. .
T Consensus 159 ~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 159 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 9999753 488999999999999999999954 599999999999999999999999999987642 3
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
.++|+.|||||++ ....|+.++||||+||++|||+||+.||.+... .+..+...... .+.+....
T Consensus 230 ~~GTp~YmAPEvl-------~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~------~~~~~~~~ 294 (346)
T 4fih_A 230 LVGTPYWMAPELI-------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNL------PPRLKNLH 294 (346)
T ss_dssp CCSCGGGCCHHHH-------TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSS------CCCCSCGG
T ss_pred cccCcCcCCHHHH-------CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCC------CCCCCccc
Confidence 5679999999975 345678899999999999999999999975422 12122211110 00111111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+ .++.+++.+||+.||++|||+.|+++
T Consensus 295 ~~s---~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVS---PSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSC---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCC---HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122 34566778899999999999998865
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.8e-49 Score=410.80 Aligned_cols=238 Identities=21% Similarity=0.363 Sum_probs=186.7
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
..+.||+|+||+||+|+. .+|+.||||++... ...+.+.+|++++++++|||||++++++.+.+.+|||||||++
T Consensus 28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 357899999999999995 56899999999754 2245688999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++...+. ..+++.....|+.||+.||+|||+ .+||||||||+||||+.++.+||+|||+++....
T Consensus 108 g~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 999999975432 257888999999999999999995 4599999999999999999999999999987653
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
..++|+.|||||++. ...|+.++||||+||++|||+||+.||..... .+........... .
T Consensus 182 ~~~~~GT~~YmAPE~l~-------~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~~~--------~ 244 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICE-------NKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--KNLVLKIISGSFP--------P 244 (350)
T ss_dssp HHHHHSCCTTCCHHHHT-------TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTCCC--------C
T ss_pred ccccCCCccccCHHHHC-------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCC--------C
Confidence 245799999999753 45678899999999999999999999975432 2222221111100 0
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.....+ .++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~s---~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 245 VSLHYS---YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCccCC---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111122 34566778899999999999999975
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.8e-49 Score=413.93 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=196.2
Q ss_pred hhccccccCcceEEEEEeCC------CcEEEEEEecccc---chHHHHHHHHHHhccCC-CcccceeEEEEcC-CeEEEE
Q 006559 337 SAELLGKGCVGATYKVVLDG------GDVVVVKRIRERK---KKREVDEWLRVIGGLRH-SNIVSIRAYCNGK-DELFLV 405 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~------~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~-~~~~lV 405 (640)
..+.||+|+||+||+|++.+ ++.||||.++... ..+++.+|++++.+++| ||||+++|+|... +.+|||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 35789999999999998643 3579999998653 34568899999999976 8999999999764 578999
Q ss_pred EeccCCCCHHHhhccCCC-----------CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCe
Q 006559 406 YDYLPHGSLHSLLHGSRG-----------PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNA 474 (640)
Q Consensus 406 ~Ey~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~ 474 (640)
||||++|+|.++|+.... .....++|..++.++.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCE
Confidence 999999999999975431 1123589999999999999999999954 59999999999999999999
Q ss_pred EEccCCcccccCC--------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHH
Q 006559 475 CISDIGVHQLFHT--------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVK 545 (640)
Q Consensus 475 kl~DfGl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~ 545 (640)
||+|||+++.... ...+|..|||||++ ....|+.++|||||||+||||+| |+.||.+......
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l-------~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~- 296 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE- 296 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHH-------hcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-
Confidence 9999999987532 12457889999964 45678899999999999999999 8999975432211
Q ss_pred HHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 546 WVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..+.+..... +..+. .+..++.+++..||+.||++||||.||++.|+++.+.
T Consensus 297 ~~~~i~~g~~--------~~~p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 297 FCRRLKEGTR--------MRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHTCC--------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC--------CCCCc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1111111100 01111 1233567788899999999999999999999998643
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.1e-48 Score=409.75 Aligned_cols=236 Identities=19% Similarity=0.300 Sum_probs=191.0
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.+.||+|+||.||+|+. .+|+.||||++... ...+.+.+|+++|++++|||||+++++|...+.+|||||||++|+|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999996 46899999999754 3455688999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------C
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------P 488 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------~ 488 (640)
.++++.. .+++..+..|+.||+.||+|||+. +||||||||+||||+.+|.+||+|||+++.+.. .
T Consensus 236 ~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 236 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 9999754 488999999999999999999954 599999999999999999999999999987642 3
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
.++|+.|||||++ ....|+.++|||||||++|||++|+.||.+... .+..+...... .+.+....
T Consensus 307 ~~GTp~YmAPEvl-------~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~------~~~~~~~~ 371 (423)
T 4fie_A 307 LVGTPYWMAPELI-------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNL------PPRLKNLH 371 (423)
T ss_dssp CEECTTTCCHHHH-------TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC------CCCCSCTT
T ss_pred cccCcCcCCHHHH-------CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCC------CCCCcccc
Confidence 4679999999975 345678899999999999999999999975432 12122211110 00111111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+ .++.+++.+||+.||++|||+.|+++
T Consensus 372 ~~s---~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVS---PSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSC---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCC---HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122 34566778899999999999999865
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-48 Score=396.99 Aligned_cols=234 Identities=17% Similarity=0.247 Sum_probs=191.2
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..++||+|+||+||+|+. .+++.||||++... ...+.+.+|++++++++|||||++++++.+++..|||||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 357899999999999995 56889999999753 234568899999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+|+|.+++.... .+++.....++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.+..
T Consensus 116 gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999997643 589999999999999999999954 599999999999999999999999999987631
Q ss_pred -----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccch
Q 006559 488 -----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 488 -----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 562 (640)
..++|+.|||||++ ....|+.++||||+||++|||+||+.||...... ...+.....
T Consensus 188 ~~~~~~~~GTp~YmAPEvl-------~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~--------- 249 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELL-------TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--LIFAKIIKL--------- 249 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHH-------HHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT---------
T ss_pred cccccCcccCcccCCHHHH-------cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcC---------
Confidence 34689999999975 3456778999999999999999999999754322 111111111
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVH 599 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~ 599 (640)
....+...+. ++.+++.+||+.||++|||+.|+.
T Consensus 250 ~~~~p~~~s~---~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 250 EYDFPEKFFP---KARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCCCCTTCCH---HHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCCCcccCH---HHHHHHHHHccCCHhHCcChHHHc
Confidence 1111122222 356677889999999999999874
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.4e-48 Score=386.51 Aligned_cols=234 Identities=18% Similarity=0.282 Sum_probs=179.8
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||+||+|+. .+|+.||||++... ...+.+.+|++++++++|||||++++++.+++..|+||||| +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 56899999999999995 56899999998654 22456889999999999999999999999999999999999 6
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... ++++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 97 g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~ 168 (275)
T 3hyh_A 97 NELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168 (275)
T ss_dssp EEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCCcc
Confidence 89999997643 589999999999999999999954 599999999999999999999999999987542
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
..++|+.|+|||++.+.+ .++.++||||+||++|||+||+.||.+... ....+...... ...
T Consensus 169 ~~~~GT~~Y~APE~~~~~~------y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i~~~~---------~~~ 231 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKL------YAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNISNGV---------YTL 231 (275)
T ss_dssp ------CTTSCHHHHSSSS------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC---------CCC
T ss_pred CCeeECcccCChhhhcCCC------CCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCC---------CCC
Confidence 346799999999864322 235789999999999999999999975432 22222221111 111
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+...+. ++.+++.+||+.||++|||+.|+++
T Consensus 232 p~~~s~---~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PKFLSP---GAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTTSCH---HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCH---HHHHHHHHHccCChhHCcCHHHHHc
Confidence 112222 3566778899999999999999875
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.6e-48 Score=392.61 Aligned_cols=230 Identities=21% Similarity=0.300 Sum_probs=180.4
Q ss_pred hhccccccCcceEEEEEeC----CCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVLD----GGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~----~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
..+.||+|+||+||+|+.. .++.||||.++.. .....+.+|++++++++|||||++++++.+++..||||||
T Consensus 28 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 28 LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEc
Confidence 3578999999999999852 4678999999754 2334678899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC--
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH-- 486 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~-- 486 (640)
|++|+|.+++.... .+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 108 ~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999998653 589999999999999999999954 59999999999999999999999999998642
Q ss_pred ----CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccch
Q 006559 487 ----TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 487 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 562 (640)
...++|+.|||||++ ....|+.++||||+||++|||+||+.||.+... .+........
T Consensus 180 ~~~~~~~~GT~~YmAPE~~-------~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~--------- 241 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVV-------NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTMILKA--------- 241 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHH-------HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC---------
T ss_pred CccccccccCcccCCHHHh-------ccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHHHHcC---------
Confidence 235679999999975 345677899999999999999999999975432 2222221111
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
....+...+. ++.+++.+||+.||++|||+
T Consensus 242 ~~~~p~~~s~---~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 242 KLGMPQFLSP---EAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCCCCTTSCH---HHHHHHHHHTCSSGGGSTTC
T ss_pred CCCCCCcCCH---HHHHHHHHHcccCHHHCCCC
Confidence 1111112222 45667788999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-46 Score=384.52 Aligned_cols=236 Identities=19% Similarity=0.266 Sum_probs=178.1
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCC------------e
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKD------------E 401 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------------~ 401 (640)
.+.||+|+||+||+|+. .+|+.||||+++... ..+.+.+|++++++++|||||++++++...+ .
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 46899999999999996 468899999987542 3456889999999999999999999987543 3
Q ss_pred EEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCc
Q 006559 402 LFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV 481 (640)
Q Consensus 402 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 481 (640)
.|+|||||++|+|.+++..... ....++...+.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred EEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCcc
Confidence 7999999999999999986532 12356777889999999999999954 599999999999999999999999999
Q ss_pred ccccCC------------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch
Q 006559 482 HQLFHT------------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI 543 (640)
Q Consensus 482 ~~~~~~------------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~ 543 (640)
++.... ..++|+.|||||++. ...|+.++|||||||++|||++ ||.... ..
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~-------~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~ 233 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH-------GNSYSHKVDIFSLGLILFELLY---PFSTQM-ER 233 (299)
T ss_dssp C--------------------------CCCTTSCHHHHT-------TCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHc-------CCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HH
Confidence 987532 135799999999753 4567889999999999999997 775321 11
Q ss_pred HHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 544 VKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 544 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
......... ...++...+....+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~-----------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 VRTLTDVRN-----------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHT-----------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhc-----------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111110 0112222333445667888999999999999999875
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-44 Score=379.44 Aligned_cols=248 Identities=21% Similarity=0.329 Sum_probs=186.9
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEc------CCeEEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNG------KDELFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~~~lV~ 406 (640)
.+.||+|+||+||+|+. .+|+.||||+++... ..+.+.+|+++|++++|||||++++++.. .+.+||||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 56899999999999996 568999999997542 23557789999999999999999999764 35799999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
|||+ |+|.+++.... ++++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.+.
T Consensus 139 E~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 139 DLME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp ECCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred eCCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 9996 78999997643 589999999999999999999954 59999999999999999999999999998652
Q ss_pred ----------CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHHHH-HHhhccc
Q 006559 487 ----------TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVKWV-QMMGQDE 554 (640)
Q Consensus 487 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~~~-~~~~~~~ 554 (640)
...++|+.|+|||++.+ ...++.++||||+||++|||+||+.||.+... +....+ ...+...
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~------~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~ 283 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLS------LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 283 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTT------CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred cCccccccccccceeChHhcCHHHhcC------CCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 23567999999997633 23467899999999999999999999975432 121111 1111110
Q ss_pred -ccccccch--------hhc--cChHH----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 555 -SAWEVFDF--------ELI--MDKEM----EEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 555 -~~~~~~d~--------~~~--~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+..... ... ..... .....++.+++.+||..||++|||+.|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000000 000 00000 011235677888999999999999999865
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.2e-44 Score=375.02 Aligned_cols=187 Identities=18% Similarity=0.300 Sum_probs=161.1
Q ss_pred hhccccccCcceEEEEEeC----CCcEEEEEEeccccchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 337 SAELLGKGCVGATYKVVLD----GGDVVVVKRIRERKKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
..+.||+|+||+||+|+.+ .++.||||++........+.+|+++++.+ +|||||++++++...+..|+|||||++
T Consensus 25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 3568999999999999853 46789999998776667788999999988 699999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC-CCeEEccCCcccccCC---
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL-GNACISDIGVHQLFHT--- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGl~~~~~~--- 487 (640)
|+|.+++. .+++.....++.|++.||+|||+ .+||||||||+|||++.+ +.+||+|||+|+....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 37888999999999999999995 459999999999999876 7999999999975421
Q ss_pred -------------------------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 006559 488 -------------------------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAK 536 (640)
Q Consensus 488 -------------------------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~ 536 (640)
..++|+.|+|||++.+. ..++.++||||+||++|||+||+.||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC------PNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTC------SCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCC------CCCCCccchhhhHHHHHHHHHCCCCC
Confidence 23579999999986432 34678999999999999999999999
Q ss_pred CCCC
Q 006559 537 GDGE 540 (640)
Q Consensus 537 ~~~~ 540 (640)
....
T Consensus 248 ~~~~ 251 (361)
T 4f9c_A 248 YKAS 251 (361)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 6543
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.2e-43 Score=384.94 Aligned_cols=236 Identities=19% Similarity=0.231 Sum_probs=185.1
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHH---HHHHHHhccCCCcccceeEEEEcCCeEEEEEec
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVD---EWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~---~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
.++||+|+||+||+|+.. +|+.||||++... .....+. .++.+++.++|||||+++++|.+.+.+||||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 467999999999999964 6899999999653 1122233 345677888999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT- 487 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~- 487 (640)
|++|+|.++|.... .+++.....|+.||+.||+|||+ .+||||||||+||||+.+|.+||+|||+++.+..
T Consensus 274 ~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 274 MNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp CCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 99999999997643 58999999999999999999994 5599999999999999999999999999987643
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHHHHHHhhcccccccccchh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
..++|+.|||||++. ....|+.++||||+||++|||+||+.||.+... ......+.... ..
T Consensus 346 ~~~t~~GTp~YmAPEvl~------~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~---------~~ 410 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQ------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---------MA 410 (689)
T ss_dssp CCCSCCSCGGGCCHHHHS------TTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH---------CC
T ss_pred CCCCccCCcCccCHHHHh------CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC---------CC
Confidence 457899999999753 234577899999999999999999999975322 12111111111 11
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPN-----MSIVH 599 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~~v~ 599 (640)
...+...+. ++.+++..||+.||++|++ +.||.
T Consensus 411 ~~~p~~~S~---~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 411 VELPDSFSP---ELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp CCCCTTSCH---HHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred CCCCccCCH---HHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 111222223 3566777899999999998 56664
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.5e-42 Score=357.89 Aligned_cols=261 Identities=33% Similarity=0.554 Sum_probs=214.5
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.+.||+|+||.||+|+..+++.||||++.... ....+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 114 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114 (326)
T ss_dssp TTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBH
T ss_pred ceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCH
Confidence 56899999999999998889999999997652 234688999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-------
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------- 487 (640)
.+++..... ...+++|..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||+|||+++....
T Consensus 115 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 193 (326)
T 3uim_A 115 ASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 193 (326)
T ss_dssp HHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEEC
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccc
Confidence 999986542 233589999999999999999999976445799999999999999999999999999986542
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCC------CCCcchHHHHHHhhcccccccccc
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKG------DGELGIVKWVQMMGQDESAWEVFD 561 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~------~~~~~~~~~~~~~~~~~~~~~~~d 561 (640)
...+|..|+|||++ ....++.++|||||||++|||+||+.||. ........|+.............+
T Consensus 194 ~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (326)
T 3uim_A 194 AVRGTIGHIAPEYL-------STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266 (326)
T ss_dssp CCCSCGGGCCHHHH-------HHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSC
T ss_pred cccCCcCccCHHHh-------ccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcC
Confidence 23368899999964 33456789999999999999999999996 234456667666555544444444
Q ss_pred hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 562 FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
...... ...+....+.+++..||+.||++|||+.||++.|+....
T Consensus 267 ~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 267 VDLQGN-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp TTCTTS-CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred hhhccc-cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 443222 234667789999999999999999999999999987543
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.5e-41 Score=352.51 Aligned_cols=258 Identities=29% Similarity=0.460 Sum_probs=209.6
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
.+.||+|+||.||+|+..++..||||++... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 5679999999999999888999999998755 33467889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC--------
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-------- 487 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-------- 487 (640)
+++..... ....++|..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 124 ~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 124 RHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp GGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred HHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 99976532 22358999999999999999999995 4599999999999999999999999999876432
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCC----CcchHHHHHHhhcccccccccchh
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG----ELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
...++..|+|||++ ....++.++|||||||++|||+||+.||... ......|..............++.
T Consensus 200 ~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (321)
T 2qkw_B 200 VVKGTLGYIDPEYF-------IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272 (321)
T ss_dssp CCEEETTTCCHHHH-------HHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSS
T ss_pred ccCCCccccCHHHh-------cCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChh
Confidence 12357889999965 3345778999999999999999999998742 233455554433333333444433
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
.... ...+....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 273 ~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 273 LADK-IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CTTC-SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccc-cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 3211 124566778889999999999999999999999999764
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.2e-42 Score=380.62 Aligned_cols=240 Identities=18% Similarity=0.248 Sum_probs=191.2
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
..+.||+|+||+||+|+. .+|+.||+|++... ...+.+.+|+++|+.++|||||+++++|.+.+.+|||||||++|+
T Consensus 161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 357899999999999996 46899999998755 334668899999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC--CCeEEccCCcccccCCC---
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL--GNACISDIGVHQLFHTP--- 488 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~--~~~kl~DfGl~~~~~~~--- 488 (640)
|.+++.... ..+++.....++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++.+...
T Consensus 241 L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 999997543 2589999999999999999999954 59999999999999854 89999999999887542
Q ss_pred --ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 489 --FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 489 --~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
.++|+.|+|||++. ...|+.++||||+||++|||++|+.||.+.... +.......... . +...
T Consensus 314 ~~~~GT~~y~APEv~~-------~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~~~i~~~~~--~-~~~~--- 378 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAE-------GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNVKSCDW--N-MDDS--- 378 (573)
T ss_dssp EEECSSGGGCCHHHHT-------TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCC--C-CCSG---
T ss_pred eeeEECccccCHHHhC-------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHhCCC--C-CCcc---
Confidence 35799999999753 345778999999999999999999999754321 11111111100 0 0000
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......++.+++.+||+.||++|||+.|+++
T Consensus 379 --~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 --AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111234567788899999999999999875
No 22
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-41 Score=352.83 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=197.2
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc-chHHHHHHHHHHhccCCCcccceeEEEEcCC----eEEEEEeccCC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK-KKREVDEWLRVIGGLRHSNIVSIRAYCNGKD----ELFLVYDYLPH 411 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lV~Ey~~~ 411 (640)
..++||+|+||.||+|+.. ++.||||++.... .......|+.++++++||||+++++++.... ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 3578999999999999876 6899999997653 3345567888999999999999999998743 47999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcC-------CCCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGY-------NKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
|+|.++++.. .++|..+..++.|++.||+|||+. ..++|+||||||+|||++.++.+||+|||+++.
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~ 180 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence 9999999754 489999999999999999999954 011699999999999999999999999999976
Q ss_pred cCC--------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHHHHHHhhcccc
Q 006559 485 FHT--------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVKWVQMMGQDES 555 (640)
Q Consensus 485 ~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~ 555 (640)
... ...+|..|+|||++.+... ....++.++|||||||++|||+||+.||..... ....+.........
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAIN--FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp ECTTSCCCCCTTCCCCGGGCCHHHHTTCCC--CCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccCccccccCccCccccCHhhcccccc--cCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 532 1346889999998643211 113456789999999999999999999974221 11111111111110
Q ss_pred cccc--------cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 556 AWEV--------FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 556 ~~~~--------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
...+ ..+.+...........++.+++.+||+.||++|||+.||++.|+++...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0000 0000000001123455688899999999999999999999999998754
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.1e-41 Score=346.54 Aligned_cols=253 Identities=27% Similarity=0.385 Sum_probs=190.4
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+. .+..||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 357899999999999987 57889999987552 2346788999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... ....+++..++.++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 120 ~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 9999998643 1124889999999999999999999532 2399999999999999999999999999876543
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
...+|..|+|||++. ...++.++|||||||++|||+||+.||...... ............ ...
T Consensus 197 ~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~~-------~~~ 260 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLR-------DEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFKCKR-------LEI 260 (309)
T ss_dssp -----CCTTSCHHHHT-------TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHSCCC-------CCC
T ss_pred ccCCCCccccChhhhc-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCC-------CCC
Confidence 234688999999753 345678999999999999999999999753321 111111100000 001
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCCC
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGSID 612 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~~~ 612 (640)
+... ..++.+++.+||+.||++|||+.++++.|+.+......+
T Consensus 261 ~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 261 PRNL---NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred CccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 1111 234667888899999999999999999999998765443
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=346.73 Aligned_cols=246 Identities=26% Similarity=0.447 Sum_probs=196.0
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.++||+|+||.||+|+.. ++..||+|++... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 578999999999999964 5889999988654 3456788999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-------
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------- 487 (640)
.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 95 RGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp HHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred HHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99998643 2589999999999999999999954 599999999999999999999999999976532
Q ss_pred -------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccc
Q 006559 488 -------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDE 554 (640)
Q Consensus 488 -------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 554 (640)
...+|..|+|||++ ....++.++|||||||++|||++|..|+........... .
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~------~ 234 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMI-------NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG------L 234 (310)
T ss_dssp ------------CCCCSCGGGCCHHHH-------TTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS------B
T ss_pred cccccccccccccccCCCcceeCHHHh-------cCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh------h
Confidence 23467889999975 345677899999999999999999999864221100000 0
Q ss_pred ccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 555 SAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 555 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
......+.. .+. .....+.+++.+||+.||++|||+.++++.|++++..
T Consensus 235 ~~~~~~~~~--~~~---~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 235 NVRGFLDRY--CPP---NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CHHHHHHHT--CCT---TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhcccccc--CCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 000000000 011 1123467788889999999999999999999998754
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.3e-40 Score=334.50 Aligned_cols=244 Identities=23% Similarity=0.383 Sum_probs=198.7
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHHH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLHS 416 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~ 416 (640)
.+.||+|+||.||+|+..++..||+|++... ...+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHH
Confidence 5679999999999999988899999999866 356778999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-------Cc
Q 006559 417 LLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-------PF 489 (640)
Q Consensus 417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-------~~ 489 (640)
++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... ..
T Consensus 95 ~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 167 (269)
T 4hcu_A 95 YLRTQRG----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167 (269)
T ss_dssp HHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred HHHhcCc----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence 9975432 588999999999999999999954 599999999999999999999999999986542 12
Q ss_pred cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 490 ~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+..|+|||++ ....++.++||||+||++|||+| |+.||...... ........... .. .+.
T Consensus 168 ~~~~~y~aPE~~-------~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~---~~-----~~~ 230 (269)
T 4hcu_A 168 KFPVKWASPEVF-------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFR---LY-----KPR 230 (269)
T ss_dssp TCCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCC---CC-----CCT
T ss_pred ccccccCCHHHh-------cCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCcc---CC-----CCC
Confidence 335679999964 34567889999999999999999 99999754321 11222111100 00 011
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.. ...+.+++..||+.||++||++.++++.|+++...
T Consensus 231 ~~---~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LA---STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cC---CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11 23466778889999999999999999999998865
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-40 Score=352.94 Aligned_cols=249 Identities=20% Similarity=0.361 Sum_probs=195.9
Q ss_pred hhccccccCcceEEEEEeC--------CCcEEEEEEecccc---chHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEE
Q 006559 337 SAELLGKGCVGATYKVVLD--------GGDVVVVKRIRERK---KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFL 404 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~---~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 404 (640)
..+.||+|+||.||+|+.. ++..||||.++... ..+.+.+|+++++++ +||||++++++|...+..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 3578999999999999852 34579999997653 235678899999999 89999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCCC-----------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC
Q 006559 405 VYDYLPHGSLHSLLHGSRGP-----------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN 473 (640)
Q Consensus 405 V~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~ 473 (640)
||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEECCCCC
Confidence 99999999999999865321 11247899999999999999999995 45999999999999999999
Q ss_pred eEEccCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchH
Q 006559 474 ACISDIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIV 544 (640)
Q Consensus 474 ~kl~DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~ 544 (640)
+||+|||+++..... ...+..|+|||++. ...++.++|||||||++|||+| |+.||.......
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-------~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~- 313 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-------DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE- 313 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH-------TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhc-------CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-
Confidence 999999999865421 23356899999753 3567789999999999999999 999997543221
Q ss_pred HHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 545 KWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
........... ..+. ....++.+++..||+.||++||++.|+++.|+++...
T Consensus 314 -~~~~~~~~~~~--------~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 314 -LFKLLKEGHRM--------DKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp -HHHHHHTTCCC--------CCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHHHHhcCCCC--------CCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111000 0111 1223567788889999999999999999999998753
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.8e-40 Score=340.52 Aligned_cols=236 Identities=20% Similarity=0.310 Sum_probs=189.2
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 46799999999999984 56889999998654 3456688999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------C
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------P 488 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------~ 488 (640)
.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.... .
T Consensus 105 ~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 105 TDVVTET------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 9999754 378999999999999999999954 599999999999999999999999999876542 2
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+|..|+|||++ ....++.++|||||||++|||+||+.||.........+........ ......
T Consensus 176 ~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--------~~~~~~ 240 (297)
T 3fxz_A 176 MVGTPYWMAPEVV-------TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP--------ELQNPE 240 (297)
T ss_dssp CCSCGGGCCHHHH-------HCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC--------CCSCGG
T ss_pred ccCCcCccChhhh-------cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCCCcc
Confidence 3568899999975 3456778999999999999999999999754321111111101000 000111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 241 ~---~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 241 K---LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp G---SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c---cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1 2234667788899999999999999875
No 28
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.1e-41 Score=358.13 Aligned_cols=245 Identities=22% Similarity=0.354 Sum_probs=195.8
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccccc---hHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERKK---KREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+.. ++..||||.++.... .+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 3578999999999999976 688999999876522 345778999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCCc---
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF--- 489 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~~--- 489 (640)
+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999997542 2488999999999999999999954 59999999999999999999999999998654321
Q ss_pred -----cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 490 -----FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 490 -----~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
..+..|+|||++ ....++.++|||||||++|||+| |+.||....... ..+.......
T Consensus 271 ~~~~~~~~~~y~aPE~~-------~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~~~~~~~-------- 333 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEAL-------NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKGGR-------- 333 (377)
T ss_dssp CSSCCEEEGGGSCHHHH-------HHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHHHHTTCC--------
T ss_pred cCCCCCCCcCcCCHhHh-------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------
Confidence 125579999965 33457789999999999999999 999997533211 1111111100
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
...+. ....++.+++..||+.||++|||+.++++.|+++..+
T Consensus 334 ~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 334 LPCPE---LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 00111 1223567788889999999999999999999998754
No 29
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=345.66 Aligned_cols=246 Identities=21% Similarity=0.310 Sum_probs=195.2
Q ss_pred hhccccccCcceEEEEEeC----CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLD----GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~----~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+|+.. .+..||||.++.. ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 3578999999999999974 3456999999864 23456889999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999997543 2589999999999999999999954 5999999999999999999999999999876432
Q ss_pred --------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 489 --------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 489 --------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
...|..|+|||++ ....++.++|||||||++|||++ |+.||...... ...........
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~---- 272 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAI-------AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEGYR---- 272 (325)
T ss_dssp -CCEECC---CCGGGSCHHHH-------HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTTCC----
T ss_pred cceeeccCCCCcccccCHhHh-------cCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCC----
Confidence 1225579999964 33457789999999999999999 99999753321 11111111100
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
...+. .....+.+++..||+.||++|||+.+|++.|+.+....
T Consensus 273 ----~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 273 ----LPAPM---GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp ----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ----CCCCC---CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 00111 12235677888899999999999999999999987553
No 30
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8.6e-41 Score=353.94 Aligned_cols=245 Identities=21% Similarity=0.337 Sum_probs=188.0
Q ss_pred hhccccccCcceEEEEEeC----CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLD----GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~----~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+|+.. ++..||||.++.. ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 3578999999999999864 5678999999754 23456889999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCCc
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF 489 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~~ 489 (640)
++|+|.++++... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999997543 258999999999999999999995 459999999999999999999999999998764321
Q ss_pred ---------cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 490 ---------FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 490 ---------~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
..+..|+|||++ ....++.++|||||||++|||++ |+.||..... ....+.......
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~i~~~~~---- 268 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAI-------AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKAVDEGYR---- 268 (373)
T ss_dssp ------------CTTSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHHHHTTEE----
T ss_pred ccceeccCCCcCCCccChhhh-------ccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC----
Confidence 124579999964 34567889999999999999998 9999975332 111221111100
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.... ......+.+++..||+.||++||+|.+|+++|+++...
T Consensus 269 ----~~~~---~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 ----LPPP---MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ----CCCC---TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CCCC---ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0001 12234577888899999999999999999999998754
No 31
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.6e-40 Score=333.13 Aligned_cols=245 Identities=22% Similarity=0.362 Sum_probs=196.0
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHHH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLHS 416 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~ 416 (640)
.+.||+|+||.||++...++..||||+++.. ...+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHH
Confidence 5689999999999999998889999999866 356778999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-------Cc
Q 006559 417 LLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-------PF 489 (640)
Q Consensus 417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-------~~ 489 (640)
++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.... ..
T Consensus 109 ~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 181 (283)
T 3gen_A 109 YLREMR----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 181 (283)
T ss_dssp HHHCGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTST
T ss_pred HHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccccCC
Confidence 997632 258999999999999999999995 4599999999999999999999999999986542 12
Q ss_pred cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 490 ~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+..|+|||++ ....++.++|||||||++|||+| |+.||...... ............ . .+.
T Consensus 182 ~~~~~y~aPE~~-------~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~---~-----~~~ 244 (283)
T 3gen_A 182 KFPVRWSPPEVL-------MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRL---Y-----RPH 244 (283)
T ss_dssp TSCGGGCCHHHH-------HHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCC---C-----CCT
T ss_pred ccCcccCCHHHh-------ccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhcccCC---C-----CCC
Confidence 335679999964 34457789999999999999999 99999753321 111111111000 0 011
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
.. ...+.+++..||+.||++|||+.++++.|+++..+.
T Consensus 245 ~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 245 LA---SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TC---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 11 234667888899999999999999999999987653
No 32
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.3e-40 Score=358.32 Aligned_cols=244 Identities=25% Similarity=0.353 Sum_probs=197.3
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcCC-eEEEEEeccCCCCHHH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGKD-ELFLVYDYLPHGSLHS 416 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lV~Ey~~~gsL~~ 416 (640)
.+.||+|+||.||+|... ++.||||.++.....+.+.+|++++++++|||||++++++...+ ..++|||||++|+|.+
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~ 276 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHH
Confidence 568999999999999986 67899999987777788999999999999999999999987765 7999999999999999
Q ss_pred hhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC---ccccc
Q 006559 417 LLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---FFIND 493 (640)
Q Consensus 417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---~~~~~ 493 (640)
++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...+.
T Consensus 277 ~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 350 (450)
T 1k9a_A 277 YLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350 (450)
T ss_dssp HHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCT
T ss_pred HHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCc
Confidence 998643 22478999999999999999999954 5999999999999999999999999999865422 23467
Q ss_pred cccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccChHHHH
Q 006559 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEE 572 (640)
Q Consensus 494 ~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 572 (640)
.|+|||++ ....++.++|||||||++|||+| |+.||....... .......... ...+. .
T Consensus 351 ~y~aPE~~-------~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~--------~~~p~---~ 410 (450)
T 1k9a_A 351 KWTAPEAL-------REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYK--------MDAPD---G 410 (450)
T ss_dssp TTSCHHHH-------HSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTCC--------CCCCT---T
T ss_pred ceeCHHHh-------cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------CCCCC---c
Confidence 89999964 34567889999999999999999 999997533221 1111111100 00111 2
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 573 EMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 573 ~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
...++.+++..||+.||++|||+.++++.|+++...
T Consensus 411 ~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 411 CPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 234567788889999999999999999999998754
No 33
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.8e-40 Score=332.59 Aligned_cols=244 Identities=24% Similarity=0.371 Sum_probs=197.2
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHHH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLHS 416 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~ 416 (640)
.+.||+|+||.||+|+..++..||||.++.. ...+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHH
Confidence 5679999999999999998889999999866 356778999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-------c
Q 006559 417 LLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP-------F 489 (640)
Q Consensus 417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~-------~ 489 (640)
++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 93 ~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 165 (268)
T 3sxs_A 93 YLRSHG----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT 165 (268)
T ss_dssp HHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSC
T ss_pred HHHHcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCC
Confidence 997542 248899999999999999999995 45999999999999999999999999999865432 1
Q ss_pred cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 490 ~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+..|+|||++ ....++.++||||||+++|||+| |+.||...... ............ .. +.
T Consensus 166 ~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~---~~-----~~ 228 (268)
T 3sxs_A 166 KFPVKWSAPEVF-------HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKVSQGHRL---YR-----PH 228 (268)
T ss_dssp CCCGGGCCHHHH-------HHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCC---CC-----CT
T ss_pred CcCcccCCHHHH-------hccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHHHcCCCC---CC-----CC
Confidence 235579999964 33456789999999999999999 99999753321 111111111100 00 11
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.. ...+.+++..||+.||++|||+.++++.|++++.+
T Consensus 229 ~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 229 LA---SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TS---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred cC---hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11 22466788889999999999999999999999865
No 34
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=338.30 Aligned_cols=249 Identities=22% Similarity=0.355 Sum_probs=192.9
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHHHh
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLHSL 417 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~~ 417 (640)
.+.||+|+||.||+|+.. ++.||||.+......+.+.+|++++++++||||+++++++. +..++||||+++|+|.++
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~ 89 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 89 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHH
Confidence 578999999999999986 67899999987666778899999999999999999999886 457999999999999999
Q ss_pred hccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC-eEEccCCcccccCC---Cccccc
Q 006559 418 LHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN-ACISDIGVHQLFHT---PFFIND 493 (640)
Q Consensus 418 l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~-~kl~DfGl~~~~~~---~~~~~~ 493 (640)
+..... ...+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++.... ...++.
T Consensus 90 l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~ 167 (307)
T 2eva_A 90 LHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA 167 (307)
T ss_dssp HHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCT
T ss_pred HhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCC
Confidence 986431 124788899999999999999999754467999999999999998886 79999999876543 234688
Q ss_pred cccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccChHHHHH
Q 006559 494 AYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEE 573 (640)
Q Consensus 494 ~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 573 (640)
.|+|||++ ....++.++|||||||++|||+||+.||................... +.. .. ..
T Consensus 168 ~y~aPE~~-------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~--~~---~~ 229 (307)
T 2eva_A 168 AWMAPEVF-------EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR------PPL--IK---NL 229 (307)
T ss_dssp TSSCHHHH-------TCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC------CCC--BT---TC
T ss_pred ceEChhhh-------CCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC------CCc--cc---cc
Confidence 99999975 33467789999999999999999999997543332222211111100 000 01 11
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 574 MRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 574 ~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
...+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 234667888899999999999999999999987654
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.9e-40 Score=342.55 Aligned_cols=235 Identities=20% Similarity=0.262 Sum_probs=188.4
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++.++||||+++++++...+..|+||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 56899999999999996 678999999997542 2345778999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 171 (328)
T 3fe3_A 100 EVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 171 (328)
T ss_dssp BHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGG
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccc
Confidence 9999997543 488999999999999999999954 599999999999999999999999999976542
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...+|..|+|||++.+. ...+.++||||+||++|||+||+.||...... ...+...... ...+
T Consensus 172 ~~~gt~~y~aPE~~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~---------~~~p 234 (328)
T 3fe3_A 172 AFCGAPPYAAPELFQGK------KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERVLRGK---------YRIP 234 (328)
T ss_dssp TTSSSGGGCCHHHHHTC------CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC---------CCCC
T ss_pred cccCCcceeCcccccCC------CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC---------CCCC
Confidence 34568899999975322 12247899999999999999999999754322 2222211110 0111
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... ..++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~---s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 235 FYM---STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp TTS---CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111 224566778899999999999999865
No 36
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.8e-40 Score=360.94 Aligned_cols=245 Identities=21% Similarity=0.373 Sum_probs=197.6
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..+.||+|+||.||+|+..++..||||.++.. ...+.+.+|++++++++|||||++++++. .+..++|||||++|+|.
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 35789999999999999988899999999865 45678999999999999999999999986 66789999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-------
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP------- 488 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~------- 488 (640)
++++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997532 12478889999999999999999954 5999999999999999999999999999876421
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||.+... .+..+....... ...+
T Consensus 345 ~~~~~~y~aPE~~-------~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~--------~~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAI-------NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYR--------MPRP 407 (454)
T ss_dssp SSSCGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHHTCC--------CCCC
T ss_pred CcccccccCHHHh-------ccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC--------CCCC
Confidence 2235679999964 34567889999999999999999 9999975322 121222111100 0011
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. ....++.+++.+||+.||++||||.+|++.|+++...
T Consensus 408 ~---~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 408 E---NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred C---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 1 2234577788899999999999999999999998754
No 37
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=9e-40 Score=335.46 Aligned_cols=255 Identities=25% Similarity=0.314 Sum_probs=188.3
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHh--ccCCCcccceeEEEEc----CCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIG--GLRHSNIVSIRAYCNG----KDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~--~l~H~niv~l~~~~~~----~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|+. +++.||||++.... ...+..|.+++. .++||||+++++++.. ....++||||++
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEEeeccCCCcEEEEEEE-CCEEEEEEEecccc-chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 357899999999999988 57889999987543 333444444444 4899999999999754 346899999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcC-----CCCCceecCCCCCCeEECCCCCeEEccCCccccc
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGY-----NKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~ 485 (640)
+|+|.++++.. .+++..++.++.|++.||+|||+. ...+|+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 90 MGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp TCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 99999999643 489999999999999999999932 1346999999999999999999999999998764
Q ss_pred CC----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhC----------CCCCCCCC---cc
Q 006559 486 HT----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG----------KMAKGDGE---LG 542 (640)
Q Consensus 486 ~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg----------~~p~~~~~---~~ 542 (640)
.. ...+|..|+|||++...... ....++.++|||||||++|||+|| +.||.... ..
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~ 242 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV-DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS 242 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCT-TCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccccccccccccccccccceeChhhhcCcCCC-CcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc
Confidence 32 22568899999976432111 001345789999999999999999 77876421 11
Q ss_pred hHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 006559 543 IVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDI 605 (640)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i 605 (640)
.....+....... .+.............++.+++..||+.||++|||+.+|++.|++|
T Consensus 243 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 243 FEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111111111110 111111111124456788899999999999999999999999986
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.3e-39 Score=337.88 Aligned_cols=236 Identities=18% Similarity=0.275 Sum_probs=189.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.+.||+|+||.||+|+.. +|+.||||++... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred cEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 457999999999999976 6899999998754 3456688999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------C
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------P 488 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------~ 488 (640)
.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.... .
T Consensus 130 ~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQV------RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTTC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 9998743 48999999999999999999995 4599999999999999999999999999876542 2
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+|..|+|||++ ....++.++|||||||++|||+||+.||..... ........... .+......
T Consensus 201 ~~gt~~y~aPE~~-------~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~------~~~~~~~~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVI-------SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSP------PPKLKNSH 265 (321)
T ss_dssp CCSCGGGCCHHHH-------TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSS------CCCCTTGG
T ss_pred ccCCccccCHhhh-------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCC------CCCcCccc
Confidence 3568899999975 334577899999999999999999999975322 12122111110 00010111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. ....+.+++.+||+.||++|||+.++++
T Consensus 266 ~---~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 266 K---VSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp G---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 1234666778899999999999999876
No 39
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.7e-39 Score=334.68 Aligned_cols=253 Identities=30% Similarity=0.505 Sum_probs=199.8
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccc------cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRER------KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
+.||+|+||.||+|+. ++..||||++... ...+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 6799999999999986 5788999998643 22466889999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++..... ..+++|..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 116 ~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 190 (307)
T 2nru_A 116 SLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190 (307)
T ss_dssp BHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred cHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence 99999874321 2358999999999999999999995 4599999999999999999999999999876532
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhcccc-cccccc
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQDES-AWEVFD 561 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~-~~~~~d 561 (640)
...++..|+|||++. ..++.++|||||||++|||+||+.||..... ....+.+....... ....++
T Consensus 191 ~~~~~~g~~~y~aPE~~~--------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
T 2nru_A 191 MTSRIVGTTAYMAPEALR--------GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYID 262 (307)
T ss_dssp ECSSCCSCGGGCCHHHHT--------TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSC
T ss_pred cccccCCCcCcCChHHhc--------CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcc
Confidence 234688999999652 2367899999999999999999999975322 12233332222111 112222
Q ss_pred hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 562 FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
.... .........+.+++..||+.||++|||+.+|++.|+++..
T Consensus 263 ~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 263 KKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred cccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2221 1123455678889999999999999999999999999864
No 40
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.7e-39 Score=329.82 Aligned_cols=247 Identities=26% Similarity=0.421 Sum_probs=193.4
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccc---------hHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKK---------KREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 406 (640)
..+.||+|+||.||+|+. .+++.||||.+..... .+.+.+|++++++++||||+++++++.+.. ++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEE
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEE
Confidence 356899999999999996 4688999999864311 156889999999999999999999997655 7999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC-----eEEccCCc
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN-----ACISDIGV 481 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~-----~kl~DfGl 481 (640)
||+++|+|.+++.... .++++..+..++.|++.||+|||+.+ ++|+||||||+|||++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999999887543 25899999999999999999999532 23999999999999988776 99999999
Q ss_pred ccccCCC---ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 482 HQLFHTP---FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 482 ~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
++..... ..++..|+|||++.. ....++.++|||||||++|||+||+.||.........+............
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 250 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGA-----EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT 250 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSC-----SSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred cccccccccccCCCccccCchhhcc-----CCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC
Confidence 9865432 356889999997521 23446789999999999999999999998655444433333222111100
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDI 605 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i 605 (640)
... ....++.+++..||+.||++|||+.++++.|+++
T Consensus 251 -------~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 -------IPE---DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -------CCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -------CCc---ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111 1223567788889999999999999999999864
No 41
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3e-40 Score=362.74 Aligned_cols=247 Identities=22% Similarity=0.351 Sum_probs=199.1
Q ss_pred hhccccccCcceEEEEEeCC-CcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVLDG-GDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~-~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
..+.||+|+||.||+|++.. +..||||.++.. ...+++.+|++++++++|||||+++++|...+..++|||||++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 35789999999999999765 788999999865 3467789999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC------
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP------ 488 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~------ 488 (640)
.++++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99997643 23588999999999999999999954 5999999999999999999999999999876432
Q ss_pred -ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 489 -FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 489 -~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||....... ..+...... ....
T Consensus 378 ~~~~~~~y~aPE~~-------~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~--------~~~~ 440 (495)
T 1opk_A 378 GAKFPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDY--------RMER 440 (495)
T ss_dssp TCCCCGGGCCHHHH-------HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTC--------CCCC
T ss_pred CCcCCcceeCHhHH-------hcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC--------CCCC
Confidence 1235679999965 34457789999999999999999 999997543221 111111110 0011
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
+. ....++.+++..||+.||++||||.++++.|+.+....
T Consensus 441 ~~---~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 441 PE---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CC---CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 11 12235677888899999999999999999999886543
No 42
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=342.76 Aligned_cols=236 Identities=18% Similarity=0.273 Sum_probs=185.1
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 14 i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 357899999999999995 578899999987552 2356789999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.....
T Consensus 94 ~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 9999997543 589999999999999999999954 599999999999999999999999999876532
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
...+|..|+|||++.+. ..++.++||||+||++|||++|+.||.+... ....+..... ...
T Consensus 166 ~~~~~gt~~y~aPE~~~~~------~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--~~~~~~i~~~---------~~~ 228 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGK------SYLGSEADVWSMGILLYVLMCGFLPFDDDNV--MALYKKIMRG---------KYD 228 (347)
T ss_dssp ------CGGGCCHHHHTTC---------CCHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT---------CCC
T ss_pred ccccCCccCccCHHHHcCC------CCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcC---------CCC
Confidence 23568899999975322 2246889999999999999999999975432 2222211111 001
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.+...+ .++.+++.+||+.||++|||+.|+++
T Consensus 229 ~p~~~s---~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 229 VPKWLS---PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCC---HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 111112 23556788899999999999999975
No 43
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-40 Score=341.31 Aligned_cols=252 Identities=26% Similarity=0.417 Sum_probs=192.4
Q ss_pred hhccccccCcceEEEEEe-----CCCcEEEEEEecccc--chHHHHHHHHHHhccCCCcccceeEEEEcC--CeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVL-----DGGDVVVVKRIRERK--KKREVDEWLRVIGGLRHSNIVSIRAYCNGK--DELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lV~E 407 (640)
..+.||+|+||.||+|++ .+++.||||++.... ..+.+.+|++++++++||||+++++++... ...++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 357899999999999985 357889999997653 346688999999999999999999999654 46899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999997653 248899999999999999999995 4599999999999999999999999999987532
Q ss_pred C---------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccc-
Q 006559 488 P---------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAW- 557 (640)
Q Consensus 488 ~---------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 557 (640)
. ..++..|+|||++ ....++.++|||||||++|||+||..|+..... .+.+.........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~ 236 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESL-------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQM 236 (295)
T ss_dssp ---------CTTCGGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH---HHHHHHCTTCCTHH
T ss_pred CcceeeeccCCCCccceeCcHHh-------cCCCCChHHHHHHHHHHHHHHHhcccccCCChH---HHHhhhcCccccch
Confidence 1 2235569999964 345678899999999999999999999864221 1111111110000
Q ss_pred ------cccc--hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 558 ------EVFD--FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 558 ------~~~d--~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
+... .....+ .....++.+++..||+.||++|||+.|+++.|+++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 237 IVFHLIELLKNNGRLPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHhccCcCCCC---cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0000 000011 12234577788899999999999999999999998754
No 44
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=340.73 Aligned_cols=265 Identities=24% Similarity=0.297 Sum_probs=190.9
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccchHHHH--HHHHHHhccCCCcccceeEEEEc-----CCeEEEEEeccC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVD--EWLRVIGGLRHSNIVSIRAYCNG-----KDELFLVYDYLP 410 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~--~e~~~l~~l~H~niv~l~~~~~~-----~~~~~lV~Ey~~ 410 (640)
.+.||+|+||.||+|+. +++.||||++.... ...+. .++..+..++||||+++++++.. ....++||||++
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~ 95 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP 95 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence 56899999999999987 57899999987543 22233 34444556899999999986542 236789999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC------CCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN------KAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
+|+|.+++.... .++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 96 NGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp TCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 999999997543 588999999999999999999651 12699999999999999999999999999976
Q ss_pred cCC--------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-c--hHHHH
Q 006559 485 FHT--------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-G--IVKWV 547 (640)
Q Consensus 485 ~~~--------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~--~~~~~ 547 (640)
+.. ...+|..|+|||++.+.........++.++|||||||++|||+||+.|+..... . ...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 532 224688999999875433222224566789999999999999999776542111 0 00000
Q ss_pred HHhhc------------ccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCCCC
Q 006559 548 QMMGQ------------DESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGSIDG 613 (640)
Q Consensus 548 ~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~~~~ 613 (640)
..... .......+..... .......++.+++.+||+.||++|||+.|+++.|+++......++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~ 324 (336)
T 3g2f_A 250 TEVGNHPTFEDMQVLVSREKQRPKFPEAWK---ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK 324 (336)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCTTCC---CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred cccCCCchHHHHHhhhcccccCCCCCcccc---cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence 00000 0000000000000 112344568888999999999999999999999999987766554
No 45
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=344.21 Aligned_cols=252 Identities=21% Similarity=0.327 Sum_probs=198.1
Q ss_pred hhccccccCcceEEEEEeC--------CCcEEEEEEeccccc---hHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEE
Q 006559 337 SAELLGKGCVGATYKVVLD--------GGDVVVVKRIRERKK---KREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFL 404 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~---~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 404 (640)
..+.||+|+||.||+|+.. .+..||||+++.... .+.+.+|+++++++ +||||+++++++...+..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 3578999999999999852 235799999976532 35678899999999 99999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCCC-----------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC
Q 006559 405 VYDYLPHGSLHSLLHGSRGP-----------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN 473 (640)
Q Consensus 405 V~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~ 473 (640)
||||+++|+|.+++...... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 229 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNV 229 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCCCc
Confidence 99999999999999765321 123589999999999999999999954 5999999999999999999
Q ss_pred eEEccCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchH
Q 006559 474 ACISDIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIV 544 (640)
Q Consensus 474 ~kl~DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~ 544 (640)
+||+|||+++..... ..++..|+|||++ ....++.++|||||||++|||+| |+.||..... .
T Consensus 230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~ 300 (382)
T 3tt0_A 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-------FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--E 300 (382)
T ss_dssp EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH-------HSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H
T ss_pred EEEcccCcccccccccccccccCCCCCcceeCHHHh-------cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--H
Confidence 999999999865421 2336689999965 34567789999999999999999 9999975432 2
Q ss_pred HHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCC
Q 006559 545 KWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGSI 611 (640)
Q Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~~ 611 (640)
+..+........ . ... ....++.+++..||+.||++|||+.||++.|+++......
T Consensus 301 ~~~~~~~~~~~~------~--~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 301 ELFKLLKEGHRM------D--KPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp HHHHHHHTTCCC------C--CCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHcCCCC------C--CCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 222222211100 0 011 1223467788889999999999999999999999866443
No 46
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1e-39 Score=340.00 Aligned_cols=249 Identities=14% Similarity=0.153 Sum_probs=197.7
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
..+.||+|+||.||+|+. .+++.||||.+......+.+..|+++++++ +||||+++++++...+..++||||+ +|+|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 357899999999999995 578899999987665556788999999999 9999999999999999999999999 9999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC-----eEEccCCcccccCC--
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN-----ACISDIGVHQLFHT-- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~-----~kl~DfGl~~~~~~-- 487 (640)
.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+..
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99998642 2589999999999999999999954 5999999999999998887 99999999986532
Q ss_pred -----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHHHHHHhhcccc
Q 006559 488 -----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVKWVQMMGQDES 555 (640)
Q Consensus 488 -----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~ 555 (640)
...+|..|+|||++ ....++.++|||||||++|||+||+.||..... ......+.....
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~-- 235 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTH-------LGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT-- 235 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHH-------TTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH--
T ss_pred CCccccccccCCcCCCccccChHHH-------cCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh--
Confidence 23468899999975 345577899999999999999999999985332 222222221110
Q ss_pred cccccchhhccChH-HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 556 AWEVFDFELIMDKE-MEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 556 ~~~~~d~~~~~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
....... ......++.+++..||+.||++||++.++.+.|+++..+.
T Consensus 236 -------~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 236 -------KRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -------HHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -------hccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0000000 0011126778888899999999999999999999987553
No 47
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=345.07 Aligned_cols=249 Identities=23% Similarity=0.301 Sum_probs=194.7
Q ss_pred hhccccccCcceEEEEEeC------CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD------GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~------~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|++. ++..||||+++.. .....+.+|+.++++++||||+++++++......++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 3568999999999999954 3567999999754 234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCC--CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC---CeEEccCCcc
Q 006559 408 YLPHGSLHSLLHGSRG--PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG---NACISDIGVH 482 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGl~ 482 (640)
|+++|+|.+++..... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999975432 1223589999999999999999999954 599999999999999555 5999999998
Q ss_pred cccC--------CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcc
Q 006559 483 QLFH--------TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQD 553 (640)
Q Consensus 483 ~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 553 (640)
+... ....+|..|+|||++ ....++.++|||||||++|||+| |+.||...... ...+.....
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~ 302 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAF-------MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSG 302 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTT
T ss_pred cccccccccccCCCcCCcccEECHHHh-------cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC
Confidence 7542 123347789999964 34567889999999999999998 99999754322 112221111
Q ss_pred cccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 554 ESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 554 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
... .... .....+.+++..||+.||++||++.+|++.|+.+...
T Consensus 303 ~~~--------~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 303 GRM--------DPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCC--------CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC--------CCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 100 0011 1123466788889999999999999999999998765
No 48
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.6e-40 Score=330.46 Aligned_cols=243 Identities=27% Similarity=0.403 Sum_probs=184.9
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|+.. +..||||+++... ..+.+.+|+++++.++||||+++++++...+..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 3568999999999999975 7889999987541 23567889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC--------CCCeEEccCCcc
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ--------LGNACISDIGVH 482 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~--------~~~~kl~DfGl~ 482 (640)
+|+|.+++... .+++..+..++.|++.||+|||+.+..+|+||||||+|||++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 99999999643 4889999999999999999999765445999999999999986 778999999999
Q ss_pred cccCC----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 483 QLFHT----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 483 ~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
+.... ...++..|+|||++ ....++.++||||||+++|||+||+.||.........+...... ..
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~-- 232 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVI-------RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK--LA-- 232 (271)
T ss_dssp ------------CCGGGSCHHHH-------HHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC--CC--
T ss_pred cccccccccCCCCccceeCHHHh-------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC--CC--
Confidence 76543 23568899999964 34557789999999999999999999997543222211111110 00
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDI 605 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i 605 (640)
..... .....+.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 -----~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 -----LPIPS---TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----CCCCc---ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00111 1123467788889999999999999999999864
No 49
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3e-39 Score=330.95 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=193.7
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+. .++..||+|.+... ...+.+.+|++++++++||||+++++++...+..|+||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 56899999999999995 46889999998543 2235678899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... ++++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 96 PTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999997543 589999999999999999999954 599999999999999999999999999986542
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++ ....++.++|||||||++|||+||+.||......... .+.. .... .....
T Consensus 168 ~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~-~~~~----~~~~~ 234 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQA-------KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-IKHI-QDSV----PNVTT 234 (294)
T ss_dssp -------CCSSCCHHHH-------HTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-HHHH-SSCC----CCHHH
T ss_pred ccCccccCccccCHhHh-------cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHh-hccC----CCcch
Confidence 23468899999965 3345678999999999999999999999754321111 1111 1100 00000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHhhccC
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRP-NMSIVHRMIEDIRTKG 609 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~~v~~~L~~i~~~~ 609 (640)
.... .....+.+++.+|++.||++|| +++++.+.|+.+..+.
T Consensus 235 ~~~~---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 235 DVRK---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HSCT---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred hccc---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 0111 1223567788889999999999 8999999999876553
No 50
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-39 Score=337.06 Aligned_cols=244 Identities=20% Similarity=0.319 Sum_probs=188.9
Q ss_pred hhccccccCcceEEEEEeC-CCcE----EEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDV----VVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~----vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
..+.||+|+||.||+|+.. ++.. ||+|.++.. ...+.+.+|++++++++||||++++++|... ..++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEe
Confidence 3578999999999999954 3443 688887644 3456788999999999999999999999865 48899999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~ 488 (640)
+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHSTT----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 999999999986532 589999999999999999999954 5999999999999999999999999999875422
Q ss_pred --------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 489 --------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 489 --------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
..++..|+|||++ ....++.++|||||||++|||+| |+.||.......... ........
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~--~~~~~~~~--- 238 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESI-------LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS--ILEKGERL--- 238 (327)
T ss_dssp CC-------CCCGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH--HHHTTCCC---
T ss_pred cccccccCCCccccccChHHh-------ccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH--HHHcCCCC---
Confidence 2236689999964 34567889999999999999999 999997543322211 11111000
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.... ....++.+++.+||+.||++||++.++++.|+++...
T Consensus 239 -----~~~~---~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 -----PQPP---ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----CCCT---TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----CCCc---cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0011 1223567788899999999999999999999998754
No 51
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-39 Score=332.70 Aligned_cols=250 Identities=24% Similarity=0.342 Sum_probs=191.0
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+..+ .+|+|.++.. ...+.+.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 35789999999999998653 5888888753 22356788999999999999999999875 55689999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 117 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred cHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999997543 2588999999999999999999954 599999999999999999999999999875431
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++... ....++.++|||||||++|||+||+.||....... ........... .+.+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~----~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~-----~~~~ 259 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQ----DNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYA-----SPDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCC----SSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHHTCC-----CCCS
T ss_pred cccCCCCCcceECcceeecc----CCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH-HHHHHHhcCCC-----Ccch
Confidence 23568899999976321 23456789999999999999999999997532211 11111111100 0000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. .........+.+++..||+.+|++||++.++++.|+.+...
T Consensus 260 ~--~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 260 S--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp T--TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred h--hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 0 00011233567788889999999999999999999998754
No 52
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.3e-39 Score=338.25 Aligned_cols=238 Identities=20% Similarity=0.280 Sum_probs=187.4
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.+++.++||||+++++++...+..|+||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 568999999999999965 68899999986542 23567889999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC-------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH------- 486 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~------- 486 (640)
|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 92 L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred HHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 999997543 58999999999999999999995 459999999999999999999999999997653
Q ss_pred -CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 487 -TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 487 -~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
....+|..|+|||++... ..++.++|||||||++|||+||+.||.........+......... ..+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----~~~--- 230 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRR------EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----LNP--- 230 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCS------SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT----STT---
T ss_pred cCCCccCcCccCcHHhccC------CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc----CCc---
Confidence 234568899999975322 223568999999999999999999997543332222221111100 000
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......+.+++.+||+.||++|||+.|+++
T Consensus 231 ----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 ----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0112234567888899999999999999865
No 53
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.1e-39 Score=333.58 Aligned_cols=249 Identities=20% Similarity=0.308 Sum_probs=188.8
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||+||+|+..+++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KD 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CC
Confidence 56899999999999999889999999997542 23567889999999999999999999999999999999998 58
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------ 487 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------ 487 (640)
|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 105 l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 177 (311)
T 3niz_A 105 LKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT 177 (311)
T ss_dssp HHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccccc
Confidence 888887543 248899999999999999999995 4599999999999999999999999999987642
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chH-HHHHHhhcccc-cccccch-h
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIV-KWVQMMGQDES-AWEVFDF-E 563 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~-~~~~~~~~~~~-~~~~~d~-~ 563 (640)
...+|..|+|||++.+ ...++.++|||||||++|||+||+.||..... ... ........... .+..... .
T Consensus 178 ~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMG------SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CCCCCCTTCCHHHHTT------CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred CCcccCCcCCHHHhcC------CCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 2345889999997532 24567899999999999999999999974322 222 22222211110 0000000 0
Q ss_pred --------hccC----hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 564 --------LIMD----KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 564 --------~~~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.... ........++.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 000112245678888999999999999999875
No 54
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-39 Score=331.52 Aligned_cols=252 Identities=13% Similarity=0.141 Sum_probs=197.7
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
..+.||+|+||.||+|+. .+++.||||.+......+.+.+|+++++++ +|+|++++++++......++||||+ +|+|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 356799999999999995 678899999987666666788899999998 7999999999999999999999999 9999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC-----eEEccCCcccccCC--
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN-----ACISDIGVHQLFHT-- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~-----~kl~DfGl~~~~~~-- 487 (640)
.+++.... .++++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++....
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99998643 248999999999999999999994 56999999999999987776 99999999986542
Q ss_pred -----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHHHHhhcccc
Q 006559 488 -----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWVQMMGQDES 555 (640)
Q Consensus 488 -----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~ 555 (640)
...+|..|+|||++ ....++.++|||||||++|||+||+.||...... .............
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTH-------LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHH-------TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred ccccccccCccCCCCCcccCCchhh-------cCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 22457899999965 3345678999999999999999999999753221 1111111110000
Q ss_pred cccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 556 AWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 556 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
. ............++.+++..||+.||++||++.+|++.|+++..+..
T Consensus 239 ~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 239 S-------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp H-------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred C-------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 0 00000001123457778888999999999999999999999886543
No 55
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.6e-39 Score=324.22 Aligned_cols=244 Identities=23% Similarity=0.360 Sum_probs=198.0
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHHH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLHS 416 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~ 416 (640)
.+.||+|+||.||+|+..++..||+|.+... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHH
Confidence 5679999999999999988889999999866 345678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-------Cc
Q 006559 417 LLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-------PF 489 (640)
Q Consensus 417 ~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-------~~ 489 (640)
++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... ..
T Consensus 93 ~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 165 (267)
T 3t9t_A 93 YLRTQR----GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 165 (267)
T ss_dssp HHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred HHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccccccc
Confidence 997643 2578999999999999999999954 599999999999999999999999999886532 12
Q ss_pred cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 490 ~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
.++..|+|||++ ....++.++||||||+++|||+| |+.||...... ........... .. .+.
T Consensus 166 ~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~~---~~-----~~~ 228 (267)
T 3t9t_A 166 KFPVKWASPEVF-------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFR---LY-----KPR 228 (267)
T ss_dssp TCCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCC---CC-----CCT
T ss_pred cccccccChhhh-------cCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCCc---CC-----CCc
Confidence 345679999965 33456789999999999999999 89999754321 11221111100 00 011
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. ....+.+++.+||+.||++||++.++++.|+++...
T Consensus 229 ~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 229 L---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred c---CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1 123466788889999999999999999999998764
No 56
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=341.67 Aligned_cols=251 Identities=22% Similarity=0.370 Sum_probs=196.2
Q ss_pred hhccccccCcceEEEEEeCC------CcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLDG------GDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~------~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+..+ +..||||.++... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence 35679999999999999743 4789999997652 24568899999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCC-------------------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE
Q 006559 408 YLPHGSLHSLLHGSRGP-------------------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV 468 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 468 (640)
|+++|+|.+++...... ....+++..++.++.|++.||+|||+. +|+||||||+|||+
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEE
Confidence 99999999999764211 114689999999999999999999954 59999999999999
Q ss_pred CCCCCeEEccCCcccccCC--------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 006559 469 DQLGNACISDIGVHQLFHT--------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDG 539 (640)
Q Consensus 469 ~~~~~~kl~DfGl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~ 539 (640)
+.++.+||+|||+++.... ...++..|+|||++ ....++.++|||||||++|||+| |+.||...
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI-------FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh-------ccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 9999999999999876432 22346789999964 34457889999999999999999 99999754
Q ss_pred CcchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 540 ELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
... ............ ..+. ....++.+++..||+.||++||++.++++.|+++..+..
T Consensus 281 ~~~--~~~~~~~~~~~~--------~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 281 AHE--EVIYYVRDGNIL--------ACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp CHH--HHHHHHHTTCCC--------CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred ChH--HHHHHHhCCCcC--------CCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 321 122221111100 0111 122356778888999999999999999999999886543
No 57
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.8e-39 Score=327.71 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=194.3
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcC--CeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGK--DELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.+ +..||||.++.. ...+.+.+|++++++++||||+++++++... +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 568999999999999986 788999998754 2245688899999999999999999999887 788999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-Ccc
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-PFF 490 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-~~~ 490 (640)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++.++|+|||++..... ...
T Consensus 94 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 169 (271)
T 3kmu_A 94 GSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM 169 (271)
T ss_dssp CBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCB
T ss_pred CcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecccCcc
Confidence 99999998643 225899999999999999999999532 3399999999999999999999998888765433 345
Q ss_pred ccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccChHH
Q 006559 491 INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEM 570 (640)
Q Consensus 491 ~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 570 (640)
+|..|+|||++..... ..++.++|||||||++|||+||+.||....... ........... +. .+...
T Consensus 170 ~t~~y~aPE~~~~~~~----~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~-----~~--~~~~~ 236 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPE----DTNRRSADMWSFAVLLWELVTREVPFADLSNME--IGMKVALEGLR-----PT--IPPGI 236 (271)
T ss_dssp SCGGGSCHHHHHSCGG----GSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH--HHHHHHHSCCC-----CC--CCTTC
T ss_pred CCccccChhhhccCCC----CCCCchhhHHHHHHHHHHHHhCCCCccccChHH--HHHHHHhcCCC-----CC--CCCCC
Confidence 6889999997643211 223447999999999999999999997533211 11111111000 00 11111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 571 EEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 571 ~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
..++.+++..||+.||++|||+.++++.|+++..
T Consensus 237 ---~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 237 ---SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 2346677888999999999999999999999875
No 58
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.6e-39 Score=336.31 Aligned_cols=234 Identities=21% Similarity=0.301 Sum_probs=188.2
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +|+.||+|.++.. .....+.+|+++++.++||||+++++++...+..|+||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 568999999999999965 6889999999754 2345678899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC-----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH----- 486 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~----- 486 (640)
|+|.+++.... .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 90 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 161 (337)
T 1o6l_A 90 GELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence 99999997543 588999999999999999999954 59999999999999999999999999987632
Q ss_pred -CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 487 -TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 487 -~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
....+|..|+|||++ ....++.++|||||||++|||++|+.||...... ...+...... ..
T Consensus 162 ~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~---------~~ 223 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVL-------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILMEE---------IR 223 (337)
T ss_dssp BCCCEECGGGCCGGGG-------SSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC---------CC
T ss_pred ccccccChhhCChhhh-------cCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHHHHcCC---------CC
Confidence 234568899999975 3345778999999999999999999999754321 1111111110 11
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRP-----NMSIVHR 600 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~~v~~ 600 (640)
.+...+ .++.+++.+||+.||++|| ++.|+++
T Consensus 224 ~p~~~s---~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 224 FPRTLS---PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CCTTSC---HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCCC---HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 111122 2456677789999999999 8888864
No 59
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.6e-40 Score=355.68 Aligned_cols=245 Identities=23% Similarity=0.389 Sum_probs=194.1
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..+.||+|+||.||+|+..++..||||.++.. ...+++.+|++++++++||||+++++++.. +..++||||+++|+|.
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 35689999999999999988888999999865 345778999999999999999999999876 6789999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-------
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP------- 488 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~------- 488 (640)
+++....+ ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 267 ~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99974321 248899999999999999999995 45999999999999999999999999999875432
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||..... .+.......... ...+
T Consensus 341 ~~~~~~y~aPE~~-------~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~--------~~~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYR--------MPCP 403 (452)
T ss_dssp --CCGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCC--------CCCC
T ss_pred CcccccccCHhHH-------hcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC--------CCCC
Confidence 1235679999964 34567889999999999999999 9999975322 111222111100 0111
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. .....+.+++.+||+.||++|||+.++++.|+++...
T Consensus 404 ~---~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 404 P---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred C---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 1 2233567788899999999999999999999998754
No 60
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=340.05 Aligned_cols=240 Identities=17% Similarity=0.207 Sum_probs=177.8
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..+.||+|+||.||+|+.. +++.||||.++.....+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 3568999999999999976 478899999987666677888999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC---CCCeEEccCCcccccCC-----
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl~~~~~~----- 487 (640)
+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 137 ~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 137 DRIVEKG-----YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp HHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 9997543 588999999999999999999954 5999999999999975 88999999999886543
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...+|..|+|||++. ...++.++|||||||++|||+||+.||.........+........ ....
T Consensus 209 ~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~---~~~~------ 272 (349)
T 2w4o_A 209 TVCGTPGYCAPEILR-------GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY---YFIS------ 272 (349)
T ss_dssp ----CGGGSCHHHHT-------TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC---CCCT------
T ss_pred cccCCCCccCHHHhc-------CCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC---ccCC------
Confidence 234688999999753 345778999999999999999999999754332211111111110 0000
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+...+...++.+++.+||+.||++|||+.++++
T Consensus 273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001112235667888899999999999999875
No 61
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4e-39 Score=339.07 Aligned_cols=239 Identities=18% Similarity=0.254 Sum_probs=190.2
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc--------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK--------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. +|..||||.+.... ..+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEE
Confidence 3578999999999999965 58899999997542 24678899999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC----CeEEccCCccc
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG----NACISDIGVHQ 483 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGl~~ 483 (640)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 96 ~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 999999999997543 589999999999999999999954 599999999999998877 79999999998
Q ss_pred ccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 484 LFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 484 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
.... ...+|+.|+|||++ ....++.++|||||||++|||++|+.||..... ............
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~i~~~~~--- 235 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIV-------NYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITAVSY--- 235 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHH-------TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCC---
T ss_pred EcCCCCccccCCCCccEECchHH-------cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCC---
Confidence 7643 24568899999975 334577899999999999999999999975432 111111111100
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.++... .......+.+++..||..||++|||+.|+++
T Consensus 236 ~~~~~~-----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDEEF-----FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCchh-----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011111 1112234667788899999999999999873
No 62
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=331.43 Aligned_cols=259 Identities=24% Similarity=0.313 Sum_probs=189.2
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHh--ccCCCcccceeEEEEcC----CeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIG--GLRHSNIVSIRAYCNGK----DELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~--~l~H~niv~l~~~~~~~----~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|+.. +..||||++..... .....|.+++. .++||||+++++++... ...++||||++
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE-ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EEeEeecCCCeEEEEEEEC-CceEEEEEEecccc-chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 3578999999999999986 78999999865432 23333444444 45999999999999876 68999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC-----CCCceecCCCCCCeEECCCCCeEEccCCccccc
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN-----KAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~ 485 (640)
+|+|.++++.. .+++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+||+|||+++..
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999754 4889999999999999999999641 226999999999999999999999999998765
Q ss_pred CC----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhC----------CCCCCCCCc---c
Q 006559 486 HT----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG----------KMAKGDGEL---G 542 (640)
Q Consensus 486 ~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg----------~~p~~~~~~---~ 542 (640)
.. ...+|..|+|||++....... ....+.++|||||||++|||+|| +.||..... .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~ 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRN-HFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTT-CTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCc-cccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCc
Confidence 32 235688999999764332110 01112359999999999999999 555543111 1
Q ss_pred hHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 543 IVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
...+....... . ..+.........+...++.+++..||+.||++|||+.+|++.|+++....
T Consensus 272 ~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 272 YEDMREIVCIK-K----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHHTTS-C----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHhhh-c----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 11111111110 0 01111111112245667888999999999999999999999999998654
No 63
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1e-39 Score=343.94 Aligned_cols=249 Identities=21% Similarity=0.311 Sum_probs=193.3
Q ss_pred hhccccccCcceEEEEEe------CCCcEEEEEEeccccc---hHHHHHHHHHHhcc-CCCcccceeEEEEcCC-eEEEE
Q 006559 337 SAELLGKGCVGATYKVVL------DGGDVVVVKRIRERKK---KREVDEWLRVIGGL-RHSNIVSIRAYCNGKD-ELFLV 405 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~---~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~-~~~lV 405 (640)
..+.||+|+||.||+|++ .+++.||||+++.... .+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 357899999999999974 2357899999986532 35688899999999 7899999999998765 49999
Q ss_pred EeccCCCCHHHhhccCCCCC------------------------------------------------------------
Q 006559 406 YDYLPHGSLHSLLHGSRGPG------------------------------------------------------------ 425 (640)
Q Consensus 406 ~Ey~~~gsL~~~l~~~~~~~------------------------------------------------------------ 425 (640)
|||+++|+|.++++......
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 99999999999997653210
Q ss_pred -CCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC--------Ccccccccc
Q 006559 426 -RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--------PFFINDAYN 496 (640)
Q Consensus 426 -~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--------~~~~~~~y~ 496 (640)
...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ...+|..|+
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~ 262 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 262 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGC
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeE
Confidence 11288999999999999999999954 599999999999999999999999999986532 123467899
Q ss_pred CCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccChHHHHHHH
Q 006559 497 APELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMR 575 (640)
Q Consensus 497 aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 575 (640)
|||++ ....++.++|||||||++|||+| |+.||............. ..... ...+.. ...
T Consensus 263 aPE~~-------~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~--------~~~~~~---~~~ 323 (359)
T 3vhe_A 263 APETI-------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTR--------MRAPDY---TTP 323 (359)
T ss_dssp CHHHH-------HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH-HHTCC--------CCCCTT---CCH
T ss_pred Chhhh-------cCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH-HcCCC--------CCCCCC---CCH
Confidence 99964 34567889999999999999999 999997543322111111 11000 000111 123
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 576 ALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 576 ~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
++.+++..||+.||++|||+.|+++.|+++..
T Consensus 324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 46777888999999999999999999999864
No 64
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-39 Score=334.79 Aligned_cols=239 Identities=18% Similarity=0.263 Sum_probs=190.4
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
.+.||+|+||.||+|+.. ++..||+|.+... .....+.+|+++++.++||||+++++++...+..++||||+++|+|.
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 567999999999999965 5788999998755 33456788999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC--CCCeEEccCCcccccCCC-----
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ--LGNACISDIGVHQLFHTP----- 488 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~--~~~~kl~DfGl~~~~~~~----- 488 (640)
+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 90 ~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 162 (321)
T 1tki_A 90 ERINTSA----FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162 (321)
T ss_dssp HHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcccc
Confidence 9997543 2588999999999999999999954 5999999999999997 789999999999876432
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+++.|+|||++. ...++.++|||||||++|||++|+.||..... ............. ++..
T Consensus 163 ~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~---~~~~----- 225 (321)
T 1tki_A 163 LFTAPEYYAPEVHQ-------HDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENIMNAEYT---FDEE----- 225 (321)
T ss_dssp EESCGGGSCHHHHT-------TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTCCC---CCHH-----
T ss_pred ccCChhhcCcHHhc-------CCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHcCCCC---CChh-----
Confidence 34588999999753 33467899999999999999999999975432 1222221111100 0000
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......++.+++.+||..||++|||+.|+++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11122345677888999999999999999976
No 65
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.5e-39 Score=334.76 Aligned_cols=236 Identities=18% Similarity=0.263 Sum_probs=184.7
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCC-------------
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKD------------- 400 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------------- 400 (640)
.+.||+|+||.||+|+.. +++.||||+++.. ...+.+.+|++++++++||||++++++|.+..
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 568999999999999975 7899999998743 23467889999999999999999999986543
Q ss_pred --------------------------------------------eEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHH
Q 006559 401 --------------------------------------------ELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLK 436 (640)
Q Consensus 401 --------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~ 436 (640)
..++||||+++|+|.+++..... ....++..++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~ 168 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLH 168 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHHH
Confidence 38999999999999999986542 23467778899
Q ss_pred HHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC------------------ccccccccCC
Q 006559 437 LASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP------------------FFINDAYNAP 498 (640)
Q Consensus 437 i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~------------------~~~~~~y~aP 498 (640)
++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... ..+|..|+||
T Consensus 169 i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 99999999999995 45999999999999999999999999998875432 2468899999
Q ss_pred ccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccChHHHHHHHHHH
Q 006559 499 ELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALL 578 (640)
Q Consensus 499 E~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 578 (640)
|++ ....++.++|||||||++|||++|..|+.. .......... ...+........++.
T Consensus 246 E~~-------~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 303 (332)
T 3qd2_B 246 EQI-------HGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDVRN-----------LKFPLLFTQKYPQEH 303 (332)
T ss_dssp HHH-------HCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHHHT-----------TCCCHHHHHHCHHHH
T ss_pred HHh-------cCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHhhc-----------cCCCcccccCChhHH
Confidence 965 344678899999999999999998776521 1111111110 011122233445567
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 006559 579 QVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 579 ~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+++..||+.||++|||+.|+++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHccCCCCcCCCHHHHhh
Confidence 8889999999999999999875
No 66
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=333.11 Aligned_cols=239 Identities=18% Similarity=0.284 Sum_probs=190.1
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc--------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK--------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. ++..||||.+.... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 4578999999999999965 58899999987542 24678899999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC----CeEEccCCccc
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG----NACISDIGVHQ 483 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGl~~ 483 (640)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 95 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 95 LVAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999997543 589999999999999999999954 599999999999999887 89999999998
Q ss_pred ccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 484 LFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 484 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
.... ...+|..|+|||++ ....++.++|||||||++|||+||+.||...... .......... ..
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~--~~ 235 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIV-------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANVSAVN--YE 235 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHH-------TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHTC--CC
T ss_pred ECCCCCccccccCCcCcCCceee-------cCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHHhcC--CC
Confidence 7642 23568899999975 3345778999999999999999999999753321 1111111100 00
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.... ........+.+++..||+.||++|||+.++++
T Consensus 236 -~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 -FEDE-----YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -CCHH-----HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -cCcc-----ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 01112234667888899999999999999975
No 67
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.4e-39 Score=336.03 Aligned_cols=254 Identities=20% Similarity=0.315 Sum_probs=184.9
Q ss_pred hhccccccCcceEEEEEeCCCc----EEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeE------
Q 006559 337 SAELLGKGCVGATYKVVLDGGD----VVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDEL------ 402 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~----~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~------ 402 (640)
..+.||+|+||.||+|+..... .||||.++.. ...+.+.+|++++++++||||+++++++......
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 3578999999999999965432 7999998754 2346688999999999999999999999876654
Q ss_pred EEEEeccCCCCHHHhhccCCC-CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCc
Q 006559 403 FLVYDYLPHGSLHSLLHGSRG-PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV 481 (640)
Q Consensus 403 ~lV~Ey~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 481 (640)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeeccc
Confidence 999999999999999864321 1223589999999999999999999954 599999999999999999999999999
Q ss_pred ccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhc
Q 006559 482 HQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQ 552 (640)
Q Consensus 482 ~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 552 (640)
++..... ...+..|+|||++ ....++.++|||||||++|||+| |+.||....... .......
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~ 254 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESL-------ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IYNYLIG 254 (323)
T ss_dssp -----------------CCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHT
T ss_pred cccccccccccccccccCcccccCchhh-------cCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HHHHHhc
Confidence 9765321 2235679999964 34567789999999999999999 899997533221 1111111
Q ss_pred ccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCCCC
Q 006559 553 DESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGSIDG 613 (640)
Q Consensus 553 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~~~~ 613 (640)
... ..... ....++.+++.+||+.||++|||+.++++.|+++.......+
T Consensus 255 ~~~--------~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 255 GNR--------LKQPP---ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp TCC--------CCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred CCC--------CCCCC---ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 100 00111 122356778888999999999999999999999987765544
No 68
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6e-39 Score=331.42 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=195.5
Q ss_pred hhccccccCcceEEEEEe------CCCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVL------DGGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~------~~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+. .++..||||.++... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 357899999999999985 345789999997653 23567889999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCC-------------------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE
Q 006559 408 YLPHGSLHSLLHGSRGP-------------------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV 468 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 468 (640)
|+++|+|.+++...... ....+++..++.++.|++.||+|||+. +|+||||||+|||+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEEE
Confidence 99999999999764321 112488999999999999999999954 59999999999999
Q ss_pred CCCCCeEEccCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 006559 469 DQLGNACISDIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDG 539 (640)
Q Consensus 469 ~~~~~~kl~DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~ 539 (640)
+.++.+||+|||+++..... ...+..|+|||++ ....++.++|||||||++|||+| |+.||...
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL-------FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH-------HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhh-------cCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999998765321 2335679999965 33456789999999999999999 99999754
Q ss_pred CcchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 540 ELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..... ......... ..... ....++.+++.+||+.||++||++.++++.|+++..+
T Consensus 257 ~~~~~--~~~~~~~~~--------~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 257 PPERL--FNLLKTGHR--------MERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CGGGH--HHHHHTTCC--------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHHH--HHHhhcCCc--------CCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 32211 111111100 00111 1223467788889999999999999999999998754
No 69
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=339.73 Aligned_cols=238 Identities=20% Similarity=0.303 Sum_probs=189.1
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+++.. +++.||+|.+... ...+.+.+|+++++.++|||||++++++...+..|+||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999965 5788999998653 2345678899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 100 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 171 (384)
T 4fr4_A 100 GDLRYHLQQNV-----HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI 171 (384)
T ss_dssp EEHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCCce
Confidence 99999998643 589999999999999999999954 599999999999999999999999999987542
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHHHHHHhhcccccccccchhhc
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
...+|..|+|||++... ....++.++|||||||++|||+||+.||..... ............. ..
T Consensus 172 ~~~~gt~~Y~aPE~~~~~----~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~---------~~ 238 (384)
T 4fr4_A 172 TTMAGTKPYMAPEMFSSR----KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV---------VT 238 (384)
T ss_dssp CCCCSCGGGCCGGGTCCC----SSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC---------CC
T ss_pred eccCCCccccCCeeeccC----CCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc---------cC
Confidence 34578899999976321 134578899999999999999999999974322 2222222211110 01
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCC-HHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPN-MSIVH 599 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~~v~ 599 (640)
.+... ...+.+++..||+.||++||+ +.++.
T Consensus 239 ~p~~~---s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 239 YPSAW---SQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp CCTTS---CHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred CCCcC---CHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 11111 234667788899999999998 66654
No 70
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.8e-39 Score=340.46 Aligned_cols=254 Identities=13% Similarity=0.111 Sum_probs=189.9
Q ss_pred hhccccccCcceEEEEEeCC------CcEEEEEEeccccch-------------HHHHHHHHHHhccCCCcccceeEEEE
Q 006559 337 SAELLGKGCVGATYKVVLDG------GDVVVVKRIRERKKK-------------REVDEWLRVIGGLRHSNIVSIRAYCN 397 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~-------------~~~~~e~~~l~~l~H~niv~l~~~~~ 397 (640)
..+.||+|+||.||+|+... +..||||.+...... ..+..|+..+..++||||+++++++.
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 118 (364)
T 3op5_A 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118 (364)
T ss_dssp EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence 35789999999999999765 367999998654211 12234555678889999999999987
Q ss_pred cC----CeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC--CC
Q 006559 398 GK----DELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD--QL 471 (640)
Q Consensus 398 ~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~--~~ 471 (640)
.. ...|+||||+ +|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++ .+
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCT
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCC
Confidence 64 4589999999 999999997642 2589999999999999999999954 599999999999999 88
Q ss_pred CCeEEccCCcccccCC-------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 006559 472 GNACISDIGVHQLFHT-------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGD 538 (640)
Q Consensus 472 ~~~kl~DfGl~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~ 538 (640)
+.+||+|||+++.+.. ...+|..|+|||++ ....++.++|||||||++|||+||+.||.+
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAH-------NGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHH-------TTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHh-------CCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9999999999976532 12368899999965 344578899999999999999999999974
Q ss_pred CCcc--hHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 539 GELG--IVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 539 ~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
.... ...+...... .......+..+.. .....++.+++..||+.+|++||++.++++.|+++.....
T Consensus 264 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 264 NLKDPKYVRDSKIRYR-ENIASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp GTTCHHHHHHHHHHHH-HCHHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHhh-hhHHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 2211 1111111111 1111111211110 1113456778888999999999999999999999876543
No 71
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.5e-39 Score=338.96 Aligned_cols=242 Identities=14% Similarity=0.194 Sum_probs=188.4
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-------cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-------KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
..+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+++++.++||||+++++++...+..|+||||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 457899999999999986 46889999998643 1356788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC---eEEccCCccccc
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN---ACISDIGVHQLF 485 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl~~~~ 485 (640)
+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 108 ~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999888754321 122478999999999999999999954 5999999999999986654 999999999876
Q ss_pred CC------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 486 HT------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 486 ~~------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
.. ...+|..|+|||++. ...++.++|||||||++|||+||+.||......... ....... .
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~i~~~~~--~- 250 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVK-------REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE---GIIKGKY--K- 250 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHH---HHHHTCC--C-
T ss_pred cCCCeeecCCcCCcCccCHHHHc-------CCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHH---HHHcCCC--C-
Confidence 43 235688999999753 345678999999999999999999999754321111 1111000 0
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.++. .......++.+++.+||+.||++|||+.++++
T Consensus 251 ~~~~-----~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 MNPR-----QWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCHH-----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcc-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 01112335677888899999999999999974
No 72
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-39 Score=331.15 Aligned_cols=233 Identities=21% Similarity=0.300 Sum_probs=188.6
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +|+.||+|.++.. ...+.+.+|..+++.++||||+++++++.+.+..|+||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 568999999999999964 6889999999754 2345677899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---C
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---P 488 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---~ 488 (640)
|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.... .
T Consensus 91 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~ 162 (318)
T 1fot_A 91 GELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 162 (318)
T ss_dssp CBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCcccc
Confidence 99999998643 58899999999999999999994 5699999999999999999999999999987643 3
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+|..|+|||++. ...++.++|||||||++|||++|+.||..... ....+..... ....+.
T Consensus 163 ~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~---------~~~~p~ 224 (318)
T 1fot_A 163 LCGTPDYIAPEVVS-------TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKILNA---------ELRFPP 224 (318)
T ss_dssp CCSCTTTCCHHHHT-------TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHC---------CCCCCT
T ss_pred ccCCccccCHhHhc-------CCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC---------CCCCCC
Confidence 45688999999753 34577899999999999999999999975432 1111111111 111111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRP-----NMSIVH 599 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~~v~ 599 (640)
.... ++.+++.+|++.||++|| ++.++.
T Consensus 225 ~~~~---~~~~li~~lL~~dp~~R~~~~~~~~~~i~ 257 (318)
T 1fot_A 225 FFNE---DVKDLLSRLITRDLSQRLGNLQNGTEDVK 257 (318)
T ss_dssp TSCH---HHHHHHHHHTCSCTTTCTTSSTTTTHHHH
T ss_pred CCCH---HHHHHHHHHhccCHHHcCCCcCCCHHHHh
Confidence 2222 456677789999999999 788876
No 73
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=329.56 Aligned_cols=266 Identities=18% Similarity=0.208 Sum_probs=198.0
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCC--eEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKD--ELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lV~Ey~~~ 411 (640)
.++||+|+||.||+|+.. +++.||||++... ...+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 568999999999999965 4889999999754 23466778999999999999999999998755 78999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE----CCCCCeEEccCCcccccCC
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV----DQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGl~~~~~~ 487 (640)
|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 94 ~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 94 GSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp CBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999986432 22389999999999999999999954 59999999999999 7888899999999987643
Q ss_pred -----CccccccccCCccccCCCC-ccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhc-c--ccc
Q 006559 488 -----PFFINDAYNAPELKFNNNN-NYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQ-D--ESA 556 (640)
Q Consensus 488 -----~~~~~~~y~aPE~~~~~~~-~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~-~--~~~ 556 (640)
...+|..|+|||++..... ......++.++|||||||++|||+||+.||..... .....+..... . ...
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCC
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccc
Confidence 2346889999997532110 11135678899999999999999999999963221 11111111111 1 000
Q ss_pred ccc-------cc--hhhccC-hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 557 WEV-------FD--FELIMD-KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 557 ~~~-------~d--~~~~~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..+ ++ ...... .........+.+++..||+.||++|||+.|+++...+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 000 00 000000 11133445677788889999999999999999988876543
No 74
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=360.92 Aligned_cols=242 Identities=23% Similarity=0.296 Sum_probs=193.0
Q ss_pred cccccCcceEEEEEeC---CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 340 LLGKGCVGATYKVVLD---GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~~---~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.||+|+||.||+|.+. ++..||||+++.. ...+++.+|++++++++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999864 4567999999864 345778999999999999999999999976 56999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-----
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP----- 488 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~----- 488 (640)
|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 422 L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 422 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999997543 2589999999999999999999954 5999999999999999999999999999876421
Q ss_pred ----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 489 ----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 489 ----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||...... +..+.......
T Consensus 495 ~~~~~~~~~~y~APE~~-------~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~-------- 557 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECI-------NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKR-------- 557 (613)
T ss_dssp -------CCTTSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTCC--------
T ss_pred eccCCCCccceeCHhhh-------cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC--------
Confidence 1224679999964 44567889999999999999998 99999753322 11111111110
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
...+. .+..++.+++..||+.||++||++.+|++.|+.+....
T Consensus 558 ~~~p~---~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 558 MECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp CCCCT---TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCC---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 00111 22345777888999999999999999999999987543
No 75
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.9e-39 Score=326.71 Aligned_cols=249 Identities=21% Similarity=0.364 Sum_probs=188.2
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||.||+|+..+++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 46799999999999999889999999986542 236678999999999999999999999999999999999985 9
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------ 487 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------ 487 (640)
|.+++....+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 86 l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 86 LKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp HHHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 9998875432 47899999999999999999995 4599999999999999999999999999876542
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc--hHHHHHHhhccc-cccc------
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG--IVKWVQMMGQDE-SAWE------ 558 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~--~~~~~~~~~~~~-~~~~------ 558 (640)
...+|..|+|||++.+ ...++.++|||||||++|||+||+.||...... .....+...... ..+.
T Consensus 159 ~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMG------SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp ---CCCTTCCHHHHTT------CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccccccccCchheeC------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence 2345889999997532 235678999999999999999999999753321 111111111110 0000
Q ss_pred ccchhhcc------ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 559 VFDFELIM------DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 559 ~~d~~~~~------~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..++.... .........++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00100000 0000112235667888899999999999999864
No 76
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=6.4e-39 Score=333.32 Aligned_cols=243 Identities=24% Similarity=0.339 Sum_probs=188.7
Q ss_pred hccccccCcceEEEEEeC-CCcE----EEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 338 AELLGKGCVGATYKVVLD-GGDV----VVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~----vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
.+.||+|+||.||+|+.. ++.. ||+|.+.... ..+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 568999999999999964 3443 7888775442 2345678899999999999999999986 56799999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 97 PLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp TTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred CCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999997643 2578889999999999999999954 5999999999999999999999999999876321
Q ss_pred -------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhccccccccc
Q 006559 489 -------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVF 560 (640)
Q Consensus 489 -------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (640)
..++..|+|||++ ....++.++|||||||++|||+| |+.||......... ......... .
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~--~~~~~~~~~---~ 237 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESI-------HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP--DLLEKGERL---A 237 (325)
T ss_dssp TCCC-----CCTTTSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH--HHHHTTCBC---C
T ss_pred ccccccCCCCcccccChHHh-------ccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH--HHHHcCCCC---C
Confidence 2345689999964 34567889999999999999999 99999754332221 111111000 0
Q ss_pred chhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 561 DFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 561 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.+. ....++.+++..||+.||++||++.++++.|+++...
T Consensus 238 ~~~--------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 238 QPQ--------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CCT--------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCC--------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 000 0112356678889999999999999999999998654
No 77
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=341.19 Aligned_cols=245 Identities=22% Similarity=0.327 Sum_probs=185.4
Q ss_pred hccccccCcceEEEEEeC--CC--cEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEc-CCeEEEEEecc
Q 006559 338 AELLGKGCVGATYKVVLD--GG--DVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNG-KDELFLVYDYL 409 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~--~~--~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lV~Ey~ 409 (640)
.+.||+|+||.||+|+.. ++ ..||||.++... ..+.+.+|+.++++++||||++++++|.. .+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 568999999999999863 22 358999987542 34568889999999999999999999765 45789999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 174 ~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 174 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999997543 2478999999999999999999954 5999999999999999999999999999765321
Q ss_pred ---------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCc-chHHHHHHhhcccccc
Q 006559 489 ---------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGEL-GIVKWVQMMGQDESAW 557 (640)
Q Consensus 489 ---------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~-~~~~~~~~~~~~~~~~ 557 (640)
...+..|+|||++ ....++.++|||||||++|||+| |.+||..... .....+.. ....
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~---~~~~- 315 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ---GRRL- 315 (373)
T ss_dssp -----------CCGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT---TCCC-
T ss_pred cccccccCCCCCcccccChHHh-------cCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc---CCCC-
Confidence 2235679999964 34567889999999999999999 6777764322 22222111 1000
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
..+. .....+.+++..||+.||++||++.++++.|+++.....
T Consensus 316 -------~~p~---~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 316 -------LQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp -------CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred -------CCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111 122346778888999999999999999999999986644
No 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=9.8e-39 Score=336.75 Aligned_cols=239 Identities=18% Similarity=0.239 Sum_probs=188.1
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
..+.||+|+||.||+|+.. ++..||||.+.... ..+.+.+|++++++++||||+++++++...+..|+||||+++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 3578999999999999964 58899999997542 235677899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC---CCeEEccCCcccccCC-
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL---GNACISDIGVHQLFHT- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGl~~~~~~- 487 (640)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 113 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVARE-----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 99999987543 588999999999999999999954 59999999999999865 4599999999987643
Q ss_pred ----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 488 ----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
...+|..|+|||++. ...++.++|||||||++|||+||+.||...... ........... ....
T Consensus 185 ~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~i~~~~~--~~~~-- 251 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLK-------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAY--DYPS-- 251 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHT-------TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC--CCCT--
T ss_pred cccccCCCCccccCHHHHc-------cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCC--CCCc--
Confidence 235688999999753 345778999999999999999999999754321 11111111100 0000
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+.......++.+++.+||+.||++||++.++++
T Consensus 252 ----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 252 ----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ----TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001112234667788899999999999998864
No 79
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=343.86 Aligned_cols=239 Identities=17% Similarity=0.219 Sum_probs=187.4
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
..+.||+|+||.||+|.. .+|..+|+|.+.... ..+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 357899999999999985 568899999987552 235678899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC---CCCCeEEccCCcccccCC-
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFHT- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGl~~~~~~- 487 (640)
|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 95 g~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 99999987643 588999999999999999999954 599999999999998 567899999999977643
Q ss_pred -----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccch
Q 006559 488 -----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 488 -----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 562 (640)
...+|..|+|||++ ....++.++||||+||++|||++|+.||.+.... ...+....... ....+
T Consensus 167 ~~~~~~~~gt~~Y~APE~l-------~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~--~~~~~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVL-------RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAY--DFPSP 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHH-------TTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCC--CCCTT
T ss_pred CceeecccCCcccCCHHHh-------cCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhCCC--CCCcc
Confidence 23568899999975 3345778999999999999999999999754321 11111111100 00000
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......++.+++..||+.||++|||+.|+++
T Consensus 236 ------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 236 ------EWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00112234667788899999999999999875
No 80
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.2e-39 Score=327.48 Aligned_cols=244 Identities=19% Similarity=0.281 Sum_probs=184.0
Q ss_pred hhccccccCcceEEEEEeCC----CcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLDG----GDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~----~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+|+... +..||+|.+.... ..+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 35789999999999998643 4569999987542 3456788999999999999999999985 56789999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997543 258899999999999999999995 45999999999999999999999999999876432
Q ss_pred ------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccc
Q 006559 489 ------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFD 561 (640)
Q Consensus 489 ------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 561 (640)
...+..|+|||++ ....++.++|||||||++|||++ |+.||....... ..........
T Consensus 171 ~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~~------ 235 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESI-------NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGER------ 235 (281)
T ss_dssp --------CCGGGCCHHHH-------HHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCC------
T ss_pred ccccccCCCcccccChhhc-------ccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCCC------
Confidence 2235679999964 34567789999999999999997 999997533221 1111111100
Q ss_pred hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 562 FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..... .....+.+++..||+.||++|||+.++++.|+++...
T Consensus 236 --~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 236 --LPMPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp --CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00111 1223466788889999999999999999999998643
No 81
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.9e-39 Score=333.46 Aligned_cols=234 Identities=19% Similarity=0.270 Sum_probs=186.4
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+++++.++||||+++++++...+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 56899999999999996 57889999998653 22456889999999999999999999999999999999999 7
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 93 g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~ 164 (336)
T 3h4j_B 93 GELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL 164 (336)
T ss_dssp EEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc
Confidence 89999887543 588999999999999999999954 599999999999999999999999999987543
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
...+|..|+|||++.+. ...+.++|||||||++|||++|+.||.+...... ...+.......
T Consensus 165 ~~~~gt~~y~aPE~~~~~------~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------~~~i~~~~~~~ 227 (336)
T 3h4j_B 165 KTSCGSPNYAAPEVINGK------LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------FKKVNSCVYVM 227 (336)
T ss_dssp CCCTTSTTTSCGGGSCCS------GGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------BCCCCSSCCCC
T ss_pred ccccCCcCcCCHHHHcCC------CCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------HHHHHcCCCCC
Confidence 34568899999975322 1125789999999999999999999975321110 00111111111
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+...+ ..+.+++.+||+.||++|||+.|+++
T Consensus 228 p~~~s---~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 228 PDFLS---PGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CTTSC---HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cccCC---HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 11122 34567788899999999999999965
No 82
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.4e-39 Score=331.59 Aligned_cols=251 Identities=21% Similarity=0.331 Sum_probs=196.8
Q ss_pred hhccccccCcceEEEEEe------CCCcEEEEEEecccc---chHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVL------DGGDVVVVKRIRERK---KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~------~~~~~vavK~l~~~~---~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 406 (640)
..+.||+|+||.||+|+. .++..||||.++... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 357899999999999985 346789999997653 345688999999999 9999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCC-------------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC
Q 006559 407 DYLPHGSLHSLLHGSRGP-------------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN 473 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~ 473 (640)
||+++|+|.+++...... ...++++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 183 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRI 183 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETTTE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCCCC
Confidence 999999999999765321 122589999999999999999999954 5999999999999999999
Q ss_pred eEEccCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchH
Q 006559 474 ACISDIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIV 544 (640)
Q Consensus 474 ~kl~DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~ 544 (640)
+||+|||+++..... ..++..|+|||++ ....++.++|||||||++|||+| |+.||........
T Consensus 184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-------FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEEccccccccccccccceeccCCCCcceeeChHHh-------cCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 999999999876432 2235679999965 34567789999999999999999 9999975433221
Q ss_pred HHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 545 KWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
. .+...... . ...... ...++.+++..||+.||++|||+.++++.|+++..+.
T Consensus 257 ~-~~~~~~~~------~--~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 257 F-YKMIKEGF------R--MLSPEH---APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp H-HHHHHHTC------C--CCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred H-HHHhccCC------C--CCCccc---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1 11111000 0 000111 1234677888899999999999999999999987653
No 83
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=338.42 Aligned_cols=244 Identities=20% Similarity=0.276 Sum_probs=187.4
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.++||+|+||.||+|+. .+|..||+|+++.. ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999986 46889999999765 3456788999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE--CCCCCeEEccCCcccccCC-----
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV--DQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl--~~~~~~kl~DfGl~~~~~~----- 487 (640)
.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~ 246 (373)
T 2x4f_A 174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246 (373)
T ss_dssp HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence 99886542 2588999999999999999999954 59999999999999 6778999999999987643
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...+|..|+|||++ ....++.++|||||||++|||+||+.||..... ........... +....
T Consensus 247 ~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~~~~--~~~~~------ 309 (373)
T 2x4f_A 247 VNFGTPEFLAPEVV-------NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AETLNNILACR--WDLED------ 309 (373)
T ss_dssp CCCSSCTTCCHHHH-------TTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC--CCSCS------
T ss_pred cccCCCcEeChhhc-------cCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcc--CCCCh------
Confidence 23468899999975 334567899999999999999999999975432 11111111110 00000
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHh
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDI 605 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i 605 (640)
........++.+++..||+.||++||++.|+++ .+.+.
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 011112235677888899999999999999976 55443
No 84
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.8e-40 Score=338.48 Aligned_cols=259 Identities=26% Similarity=0.354 Sum_probs=179.1
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhc--cCCCcccceeEEEEcCC----eEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGG--LRHSNIVSIRAYCNGKD----ELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++.... ..++||||+++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 85 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T-THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc-chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCC
Confidence 578999999999999875 789999998754 33455667777776 79999999999998766 79999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC-----CCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN-----KAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
|+|.+++... .+++..+..++.|++.||+|||... ..+|+||||||+|||++.++.+||+|||+++...
T Consensus 86 g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~ 159 (303)
T 3gxj_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEE
T ss_pred CCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceecc
Confidence 9999999754 4778889999999999999999321 3459999999999999999999999999987653
Q ss_pred CC----------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhC----------CCCCCCCCc---ch
Q 006559 487 TP----------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG----------KMAKGDGEL---GI 543 (640)
Q Consensus 487 ~~----------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg----------~~p~~~~~~---~~ 543 (640)
.. ..+|..|+|||++...... ....++.++|||||||++|||+|| +.||..... ..
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3gxj_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINM-KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCT-TCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCC
T ss_pred CCCcccccccCCCCcCccccCHhhhcCcccc-cccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccH
Confidence 21 2468899999986433111 111345689999999999999999 555542110 00
Q ss_pred HHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 544 VKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 544 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
....+..... ...+.........+....+.+++.+||+.||++|||+.+|+++|+++..+..
T Consensus 239 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 239 EEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp C-CHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred HHHHHHHHHh-----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 1111111100 0011111001112556678889999999999999999999999999987654
No 85
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=332.45 Aligned_cols=244 Identities=20% Similarity=0.325 Sum_probs=187.7
Q ss_pred hhccccccCcceEEEEEeC-CCcE----EEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDV----VVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~----vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
..+.||+|+||.||+|+.. +++. ||+|.+... ...+.+.+|++++++++||||+++++++.... .++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence 3578999999999999954 4443 577777543 34577889999999999999999999998654 8899999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~ 488 (640)
+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 999999999976532 588999999999999999999954 5999999999999999999999999999875421
Q ss_pred --------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 489 --------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 489 --------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
..++..|+|||++ ....++.++|||||||++|||+| |+.||......... +.......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~--~~~~~~~~---- 237 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESI-------LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS--SILEKGER---- 237 (327)
T ss_dssp ---------CCCGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--HHHHTTCC----
T ss_pred cccccccCCCccccccCHHHH-------cCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH--HHHHcCCC----
Confidence 2235679999964 34567889999999999999999 99999754332221 11111100
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
...... ...++.+++..||+.||++||++.|+++.|+++...
T Consensus 238 ----~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 ----LPQPPI---CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CCCCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCcc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 001111 123466788889999999999999999999998754
No 86
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=327.42 Aligned_cols=238 Identities=19% Similarity=0.273 Sum_probs=182.0
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccccc----------------------------hHHHHHHHHHHhccCCCc
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERKK----------------------------KREVDEWLRVIGGLRHSN 388 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----------------------------~~~~~~e~~~l~~l~H~n 388 (640)
.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 56899999999999986 4678899999865421 245788999999999999
Q ss_pred ccceeEEEEc--CCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCe
Q 006559 389 IVSIRAYCNG--KDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNI 466 (640)
Q Consensus 389 iv~l~~~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 466 (640)
|+++++++.. .+..++||||+++|+|.+++... ++++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK------PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 9999999986 56899999999999998875432 589999999999999999999954 599999999999
Q ss_pred EECCCCCeEEccCCcccccCC------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 006559 467 VVDQLGNACISDIGVHQLFHT------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGE 540 (640)
Q Consensus 467 Ll~~~~~~kl~DfGl~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~ 540 (640)
|++.++.+||+|||+++.... ...+|..|+|||++..... ..++.++|||||||++|||++|+.||....
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRK----IFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCC----CEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCC----CCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 999999999999999987643 2356889999997633211 113578999999999999999999997543
Q ss_pred cchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 541 LGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. ..+.......... ...... ...++.+++.+||+.||++||++.|+++
T Consensus 245 ~--~~~~~~~~~~~~~-------~~~~~~---~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 I--MCLHSKIKSQALE-------FPDQPD---IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H--HHHHHHHHHCCCC-------CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H--HHHHHHHhcccCC-------CCCccc---cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2 2222211111000 000111 1234667788899999999999999864
No 87
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.8e-38 Score=338.40 Aligned_cols=192 Identities=21% Similarity=0.248 Sum_probs=163.2
Q ss_pred hhcccccc--CcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKG--CVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+| +||.||+|+.. +++.||||++.... ..+.+.+|++++++++|||||++++++...+..|+|||||
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence 35789999 99999999975 68899999997552 2345778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC---
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH--- 486 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~--- 486 (640)
++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 99999999976532 2488999999999999999999954 59999999999999999999999999875431
Q ss_pred ----------CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 006559 487 ----------TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539 (640)
Q Consensus 487 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~ 539 (640)
....+|..|+|||++... ...++.++|||||||++|||+||+.||.+.
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQN-----LQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTT-----SSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccccccccccccCHHHHhcc-----CCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 112457789999976321 245788999999999999999999999753
No 88
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-38 Score=331.66 Aligned_cols=239 Identities=20% Similarity=0.296 Sum_probs=174.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhccC-CCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGLR-HSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|+++++.+. ||||+++++++.+....|+||||+++|+|.
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 467999999999999975 5889999998654 3456778899999987 999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC---CeEEccCCcccccCC-----
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG---NACISDIGVHQLFHT----- 487 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGl~~~~~~----- 487 (640)
+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++....
T Consensus 95 ~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 95 ERIKKKK-----HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 9998653 58999999999999999999995 4599999999999997665 899999999986532
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-----chHHHHHHhhcccccccccc
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-----GIVKWVQMMGQDESAWEVFD 561 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~d 561 (640)
...+|..|+|||++ ....++.++|||||||++|||+||+.||..... ...+..+........ .
T Consensus 167 ~~~~~t~~y~aPE~~-------~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~---~- 235 (325)
T 3kn6_A 167 KTPCFTLHYAAPELL-------NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS---F- 235 (325)
T ss_dssp ------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC---C-
T ss_pred cccCCCcCccCHHHh-------cCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC---C-
Confidence 23458899999964 344577899999999999999999999975322 111222221111000 0
Q ss_pred hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 562 FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..........++.+++..||+.||++|||+.++++
T Consensus 236 ----~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 236 ----EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp ----CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ----CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 01111223345777888899999999999998863
No 89
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.9e-38 Score=323.50 Aligned_cols=246 Identities=23% Similarity=0.361 Sum_probs=197.8
Q ss_pred hhccccccCcceEEEEEeCC-CcEEEEEEecccc-chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVLDG-GDVVVVKRIRERK-KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
..+.||+|+||.||+|+... +..||+|.+.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 35689999999999999764 7889999998653 456788999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCCc-----
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF----- 489 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~~----- 489 (640)
.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99997643 23589999999999999999999954 59999999999999999999999999998765322
Q ss_pred --cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 490 --FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 490 --~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
..+..|+|||++ ....++.++|||||||++|||++ |+.||........ .+....... ...
T Consensus 171 ~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~--~~~~~~~~~--------~~~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--YELLEKDYR--------MER 233 (288)
T ss_dssp TEEECGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHHTTCC--------CCC
T ss_pred CCccccCcCChhhh-------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhccCC--------CCC
Confidence 235679999964 34567789999999999999999 9999975432211 111111100 001
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.. .....+.+++..||+.||++|||+.++++.|+++..+
T Consensus 234 ~~---~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 PE---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC---CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 11 1123467788889999999999999999999998765
No 90
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.7e-39 Score=358.37 Aligned_cols=245 Identities=23% Similarity=0.389 Sum_probs=196.9
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..+.||+|+||.||+|++.++..||||+++.. ...+++.+|++++++++|||||++++++.. +..|+|||||++|+|.
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 35689999999999999988888999999865 345779999999999999999999999876 6789999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-------
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP------- 488 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~------- 488 (640)
++++...+ ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 350 ~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 350 DFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 99974321 247899999999999999999995 45999999999999999999999999999876421
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||..... .+....+..... ....
T Consensus 424 ~~~~~~y~aPE~~-------~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~--------~~~~ 486 (535)
T 2h8h_A 424 AKFPIKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYR--------MPCP 486 (535)
T ss_dssp TTSCGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHHHTTCC--------CCCC
T ss_pred CcCcccccCHHHh-------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC--------CCCC
Confidence 2235679999964 34567889999999999999999 9999975322 122222111100 0011
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. .....+.+++..||+.||++|||+.+|++.|+++...
T Consensus 487 ~---~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 487 P---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred C---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 1 1233567788899999999999999999999998754
No 91
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=329.11 Aligned_cols=233 Identities=22% Similarity=0.232 Sum_probs=178.8
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhc-cCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGG-LRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~-l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..++||+|+||+||+|+.. +++.||||++.... .......|+..+.+ .+||||++++++|...+..++||||+
T Consensus 61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~- 139 (311)
T 3p1a_A 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence 3568999999999999975 78999999986541 12233344444444 48999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+|+|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 140 ~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~ 212 (311)
T 3p1a_A 140 GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA 212 (311)
T ss_dssp CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCCC
Confidence 679998887543 2589999999999999999999954 599999999999999999999999999877643
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
...+|..|+|||++. ..++.++|||||||++|||++|..|+... ..|..... . ...+..
T Consensus 213 ~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~-~-----~~~~~~- 273 (311)
T 3p1a_A 213 GEVQEGDPRYMAPELLQ--------GSYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQ-G-----YLPPEF- 273 (311)
T ss_dssp --CCCCCGGGCCGGGGG--------TCCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTT-T-----CCCHHH-
T ss_pred CcccCCCccccCHhHhc--------CCCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhc-c-----CCCccc-
Confidence 234688999999652 25778999999999999999997665431 11111111 0 001111
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
......++.+++..||+.||++|||+.|+++
T Consensus 274 ----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 274 ----TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1112345777888899999999999999875
No 92
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=338.70 Aligned_cols=230 Identities=20% Similarity=0.288 Sum_probs=182.5
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..++||+|+||.||+|+.. +++.||||+++.. ...+.+..|.+++..+ +||||+++++++...+..|+||||+
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 106 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFV 106 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCC
Confidence 3578999999999999965 5889999999754 2334567788888877 7999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC---
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH--- 486 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~--- 486 (640)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 107 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 107 NGGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999997643 588999999999999999999954 59999999999999999999999999988632
Q ss_pred ---CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 487 ---TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 487 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
....+|..|+|||++ ....++.++|||||||++|||+||+.||...... ...+..... .
T Consensus 179 ~~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~---------~ 240 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEIL-------QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAILND---------E 240 (353)
T ss_dssp -------CCGGGCCHHHH-------HHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC---------C
T ss_pred ccccccCCCcCeEChhhc-------CCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HHHHHHHcC---------C
Confidence 234578999999975 3345778999999999999999999999754321 111111111 1
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
...+.... .++.+++..|++.||++||++
T Consensus 241 ~~~p~~~~---~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 241 VVYPTWLH---EDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp CCCCTTSC---HHHHHHHHHHTCSSGGGSTTS
T ss_pred CCCCCCCC---HHHHHHHHHHhhhCHHHccCC
Confidence 11111122 235667788999999999998
No 93
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.4e-38 Score=358.70 Aligned_cols=240 Identities=23% Similarity=0.303 Sum_probs=191.2
Q ss_pred ccccccCcceEEEEEeC---CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 339 ELLGKGCVGATYKVVLD---GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~---~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
+.||+|+||.||+|.+. .+..||||+++... ..+++.+|++++++++|||||+++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 45789999997642 24678999999999999999999999974 568999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC---
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--- 488 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~--- 488 (640)
|+|.+++.... .+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.+...
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999997543 589999999999999999999954 5999999999999999999999999999865421
Q ss_pred ------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccc
Q 006559 489 ------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFD 561 (640)
Q Consensus 489 ------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 561 (640)
..++..|+|||++ ....++.++|||||||++|||+| |+.||...... +..+........
T Consensus 526 ~~~~~~~~~t~~y~APE~~-------~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~~----- 591 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECI-------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERM----- 591 (635)
T ss_dssp ---------CGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCC-----
T ss_pred cccccCCCCceeeeChhhh-------cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC-----
Confidence 1235679999964 44567889999999999999999 99999754322 111221111100
Q ss_pred hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 562 FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
..+. ....++.+++..||+.||++||++.+|++.|+++..
T Consensus 592 ---~~p~---~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 592 ---GCPA---GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp ---CCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---CCCC---CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 0111 123456778888999999999999999999999764
No 94
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-39 Score=334.67 Aligned_cols=250 Identities=20% Similarity=0.288 Sum_probs=192.8
Q ss_pred hhccccccCcceEEEEEe------CCCcEEEEEEeccc---cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVL------DGGDVVVVKRIRER---KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~------~~~~~vavK~l~~~---~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 406 (640)
..+.||+|+||.||+|+. ..+..||||.+... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 357899999999999995 23557999999754 2346788999999999 8999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCC------------------CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE
Q 006559 407 DYLPHGSLHSLLHGSRGP------------------GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV 468 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 468 (640)
||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+|||+
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEE
Confidence 999999999999765321 01247899999999999999999995 459999999999999
Q ss_pred CCCCCeEEccCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 006559 469 DQLGNACISDIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDG 539 (640)
Q Consensus 469 ~~~~~~kl~DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~ 539 (640)
+.++.+||+|||+++..... ..++..|+|||++ ....++.++|||||||++|||+| |+.||...
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL-------FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh-------ccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999765321 2235679999965 33457789999999999999998 99999754
Q ss_pred CcchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 540 ELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
...... .+...... . . ..+.. ...++.+++..||+.||++|||+.++++.|+.+...
T Consensus 279 ~~~~~~-~~~~~~~~-~-----~--~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 279 PVDANF-YKLIQNGF-K-----M--DQPFY---ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CCSHHH-HHHHHTTC-C-----C--CCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CcHHHH-HHHHhcCC-C-----C--CCCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 322111 11111100 0 0 00111 123466788889999999999999999999998755
No 95
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.1e-38 Score=330.20 Aligned_cols=260 Identities=26% Similarity=0.352 Sum_probs=197.0
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhc--cCCCcccceeEEEEcCC----eEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGG--LRHSNIVSIRAYCNGKD----ELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|+.. ++.||||.+... ..+.+..|.+++.. ++||||+++++++...+ ..++||||++
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EEeeecCCCCcEEEEEEEc-CccEEEEEeCch-hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 3578999999999999984 889999998754 34456677777765 79999999999998775 8999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC-----CCCceecCCCCCCeEECCCCCeEEccCCccccc
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN-----KAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~ 485 (640)
+|+|.+++... .+++..++.++.|++.||+|||... ..+|+||||||+|||++.++.+||+|||+++..
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 197 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceec
Confidence 99999999753 4889999999999999999999321 345999999999999999999999999998765
Q ss_pred CC----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhC----------CCCCCCCC---cc
Q 006559 486 HT----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTG----------KMAKGDGE---LG 542 (640)
Q Consensus 486 ~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg----------~~p~~~~~---~~ 542 (640)
.. ...++..|+|||++...... ....++.++|||||||++|||+|| +.||.... ..
T Consensus 198 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~ 276 (342)
T 1b6c_B 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINM-KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 276 (342)
T ss_dssp ETTTTEEEECCCSCCCCGGGCCHHHHTSCCCT-TCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred cccccccccccccCCcCcccCCHhhhcccccc-cccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCccc
Confidence 32 22468899999986433211 011234689999999999999999 67876421 12
Q ss_pred hHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 543 IVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
...+.+...... ..+.+.......+....+.+++.+||+.||++|||+.+|++.|+++..+..
T Consensus 277 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 277 VEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp HHHHHHHHTTSC-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHH-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 223332222111 011111000112455678889999999999999999999999999987654
No 96
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=331.73 Aligned_cols=244 Identities=20% Similarity=0.340 Sum_probs=189.9
Q ss_pred hccccccCcceEEEEEeCC-----CcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 338 AELLGKGCVGATYKVVLDG-----GDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
.+.||+|+||.||+|+... +..||||.++... ....+.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 5789999999999998643 2359999997642 3456788999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 129 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 129 ENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp TTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999997643 2588999999999999999999954 5999999999999999999999999999875421
Q ss_pred --------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 489 --------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 489 --------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||...... ...+.......
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~~---- 268 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAI-------SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGFR---- 268 (333)
T ss_dssp ---------CCCGGGSCHHHH-------HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCC----
T ss_pred ccccccCCCCccccccCchhc-------ccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCCc----
Confidence 1235679999965 34567789999999999999999 99999753321 11222111100
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..... .....+.+++.+||+.||++||++.++++.|+++...
T Consensus 269 ----~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 269 ----LPTPM---DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ----CCCCT---TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----CCCcc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00111 1223467788889999999999999999999998754
No 97
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.1e-38 Score=324.15 Aligned_cols=249 Identities=18% Similarity=0.276 Sum_probs=184.2
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 467999999999999964 58899999997542 235677899999999999999999999999999999999986
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 86 DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 5655554432 2589999999999999999999954 599999999999999999999999999987642
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchH---HHHHHhhcc-cccccccch
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIV---KWVQMMGQD-ESAWEVFDF 562 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~---~~~~~~~~~-~~~~~~~d~ 562 (640)
...+|..|+|||++.+ ...++.++|||||||++|||+||..|+........ ...+..... ...+.....
T Consensus 159 ~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFG------AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CSCCSCGGGCCHHHHTT------CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred cCCccccCCcChHHHcC------CCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 2345888999997532 23467899999999999999999888643222111 111111111 000000000
Q ss_pred ------------hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 563 ------------ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 563 ------------~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.............++.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000000112234667888899999999999999875
No 98
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.6e-39 Score=335.33 Aligned_cols=240 Identities=23% Similarity=0.376 Sum_probs=188.4
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEecccc-----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERK-----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC
Confidence 346799999999999995 578899999986431 23567889999999999999999999999999999999997
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC--C
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--P 488 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--~ 488 (640)
|+|.+++.... .++++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.... .
T Consensus 138 -g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 68888875432 2589999999999999999999954 599999999999999999999999999987653 3
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+|..|+|||++... ....++.++|||||||++|||+||+.||..... ............. .. ...
T Consensus 210 ~~gt~~y~aPE~~~~~----~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--~~~~~~~~~~~~~------~~-~~~ 276 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAM----DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNESP------AL-QSG 276 (348)
T ss_dssp CCSCGGGCCHHHHHTT----SSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCCC------CC-CCT
T ss_pred ccCCcceeCHhhhccc----cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcCCC------CC-CCC
Confidence 4578899999976321 234678899999999999999999999975322 1212111111100 00 011
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.. ...+.+++..||+.||++|||+.++++
T Consensus 277 ~~---~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 277 HW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11 224566778899999999999999975
No 99
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.8e-39 Score=328.92 Aligned_cols=246 Identities=22% Similarity=0.289 Sum_probs=190.1
Q ss_pred hhccccccCcceEEEEEeCC-C-------cEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVLDG-G-------DVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~-~-------~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 406 (640)
..+.||+|+||.||+|+... + ..||+|.+... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 35789999999999998543 3 46999998654 34567889999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC--------eEEcc
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN--------ACISD 478 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~--------~kl~D 478 (640)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999998643 2488999999999999999999954 5999999999999998887 99999
Q ss_pred CCcccccCCC--ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCC-CCCCCCcchHHHHHHhhcccc
Q 006559 479 IGVHQLFHTP--FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM-AKGDGELGIVKWVQMMGQDES 555 (640)
Q Consensus 479 fGl~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~-p~~~~~~~~~~~~~~~~~~~~ 555 (640)
||+++..... ..++..|+|||++.. ...++.++|||||||++|||+||.. |+...... ...........
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~~~~~~~~~~~ 236 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIEN------PKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--RKLQFYEDRHQ 236 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHC------GGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCC
T ss_pred CcccccccCccccCCcCcccCHHHhCC------CCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--HHHHHhhccCC
Confidence 9998766432 235778999997532 2457789999999999999999654 44432211 11111111100
Q ss_pred cccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 556 AWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 556 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
. +... ..++.+++..||+.||++|||+.++++.|+++.....
T Consensus 237 ~----------~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 237 L----------PAPK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp C----------CCCS---SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred C----------CCCC---CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 0 0000 1235677888999999999999999999999886543
No 100
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.2e-39 Score=334.51 Aligned_cols=256 Identities=22% Similarity=0.338 Sum_probs=194.2
Q ss_pred hhccccccCcceEEEEEeC-----CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEc--CCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVLD-----GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNG--KDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lV~ 406 (640)
..+.||+|+||.||++.+. +++.||||+++... ..+.+.+|++++++++||||+++++++.. ....++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 3578999999999998753 57889999998653 24568899999999999999999999987 46789999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999754 388999999999999999999954 59999999999999999999999999998764
Q ss_pred CC---------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcc---c
Q 006559 487 TP---------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQD---E 554 (640)
Q Consensus 487 ~~---------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~---~ 554 (640)
.. ..++..|+|||++ ....++.++|||||||++|||+||+.||.........+....... .
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 258 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECL-------KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 258 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHH-------HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHh-------cCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHH
Confidence 32 2346679999965 334566899999999999999999999864221111110000000 0
Q ss_pred ccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 555 SAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 555 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
...+..+..... +.......++.+++..||+.||++|||+.++++.|+++..+.
T Consensus 259 ~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 259 RLTELLERGERL-PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCC-CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 000000000000 000122345777888999999999999999999999997653
No 101
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.8e-38 Score=333.01 Aligned_cols=234 Identities=16% Similarity=0.234 Sum_probs=189.1
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +|+.||||.+... ...+.+.+|+++++.++||||+++++++.+.+..|+||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 568999999999999965 6889999998654 2345677899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---C
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---P 488 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---~ 488 (640)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.... .
T Consensus 126 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~ 197 (350)
T 1rdq_E 126 GEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 197 (350)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCccc
Confidence 99999997543 48899999999999999999995 4599999999999999999999999999987653 3
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..+|..|+|||++. ...++.++|||||||++|||++|+.||..... ....+..... ....+.
T Consensus 198 ~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~---------~~~~p~ 259 (350)
T 1rdq_E 198 LCGTPEALAPEIIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSG---------KVRFPS 259 (350)
T ss_dssp CEECGGGCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC---------CCCCCT
T ss_pred ccCCccccCHHHhc-------CCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcC---------CCCCCC
Confidence 45689999999753 34577899999999999999999999975432 2222221111 111111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPN-----MSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~~v~~ 600 (640)
.. ..++.+++.+||+.||++||+ +.++.+
T Consensus 260 ~~---~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 260 HF---SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp TC---CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CC---CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 12 234667778899999999998 777753
No 102
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.4e-39 Score=331.42 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=190.1
Q ss_pred hhccccccCcceEEEEEe-----CCCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcC--CeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVL-----DGGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGK--DELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-----~~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 406 (640)
..+.||+|+||.||+|++ .+++.||||++... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 357899999999999984 35788999998754 2346788999999999999999999999876 6789999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999996543 248899999999999999999995 459999999999999999999999999998754
Q ss_pred CC---------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccc
Q 006559 487 TP---------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAW 557 (640)
Q Consensus 487 ~~---------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 557 (640)
.. ..++..|+|||++ ....++.++|||||||++|||+||+.|+.... ..+...........
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~ 247 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECL-------MQSKFYIASDVWSFGVTLHELLTYCDSDSSPM---ALFLKMIGPTHGQM 247 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHH-------HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH---HHHHHHHCSCCGGG
T ss_pred CCCcceeccCCCCCCccccCCeee-------cCCCCCcchhHHHHHHHHHHHHHccCCCcchh---hHHhhccCCccccc
Confidence 32 2346679999964 33456689999999999999999999864211 11111111100000
Q ss_pred ---cc---cch--hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 006559 558 ---EV---FDF--ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIR 606 (640)
Q Consensus 558 ---~~---~d~--~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~ 606 (640)
.+ ... ...... ....++.+++..||+.||++|||+.++++.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 248 TVTRLVNTLKEGKRLPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHHHTTCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhccCCCCCCC---CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00 000 000111 12245777888899999999999999999999875
No 103
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.9e-38 Score=328.56 Aligned_cols=259 Identities=21% Similarity=0.335 Sum_probs=183.7
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||.||+|+.. +++.||||+++.. ...+.+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 567999999999999854 5889999998754 234678889999999999999999999999999999999998 69
Q ss_pred HHHhhccCC-CCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 414 LHSLLHGSR-GPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 414 L~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
|.+++.... ......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC
Confidence 999886432 1112358899999999999999999995 4599999999999999999999999999987542
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHH-HHHhhcc-ccccccc---
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKW-VQMMGQD-ESAWEVF--- 560 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~-~~~~~~~-~~~~~~~--- 560 (640)
...+|..|+|||++.+ ...++.++|||||||++|||+||+.||...... .... .+..... ...+...
T Consensus 166 ~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 166 SSEVVTLWYRAPDVLMG------SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp CCCCSCCTTCCHHHHTT------CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCCcccccccCchHhhC------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 2345889999997532 235678999999999999999999999754321 1111 1111110 0011000
Q ss_pred ---chhhc--cChHH---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 561 ---DFELI--MDKEM---------EEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 561 ---d~~~~--~~~~~---------~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
.+... ..... .....++.+++.+||+.||++|||+.|+++ .+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 301 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence 00000 00000 011235778888999999999999999865 344443
No 104
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.2e-38 Score=325.55 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=184.7
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+..+ .||||.++... ..+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 28 ~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 28 VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 35789999999999998654 59999987542 235688899999999999999999965 456789999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 105 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999997543 2589999999999999999999954 599999999999999999999999999876432
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...++..|+|||++.. .....++.++|||||||++|||+||+.||...... ....+......... +...
T Consensus 178 ~~~~~~gt~~y~aPE~~~~----~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~---~~~~ 249 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRM----QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVGRGSLSP---DLSK 249 (289)
T ss_dssp ------CCCTTCCHHHHC--------CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-HHHHHHHHHTSCCC---CTTS
T ss_pred cccccCCCccccCchhhcc----cCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-HHHHHHhcccccCc---chhh
Confidence 2345889999997531 12345678999999999999999999999753221 11111111111000 0000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
.. .....++.+++..||+.||++|||+.++++.|+++..
T Consensus 250 -~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 250 -VR---SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -SC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -cc---ccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 1223457778888999999999999999999999864
No 105
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.9e-38 Score=325.93 Aligned_cols=255 Identities=17% Similarity=0.303 Sum_probs=190.8
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|.. .++..||||+++.. ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 357899999999999995 56889999998742 234567889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999864211 112588999999999999999999954 599999999999999999999999999876542
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...++..|+|||++. ...++.++|||||||++|||+||+.||...........+........ ..
T Consensus 192 ~~~~~~~~~~y~aPE~~~-------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~~ 258 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIH-------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP------PL 258 (310)
T ss_dssp -------CCSSCCHHHHT-------TCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC------CC
T ss_pred cccccCCCeeEeChHHhC-------CCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC------CC
Confidence 234578899999653 34577899999999999999999999976544444443333221110 00
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCCC
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGSID 612 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~~~ 612 (640)
.... ...++.+++..||+.||++|||+.+|++.|+++......+
T Consensus 259 -~~~~---~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 259 -PSDH---YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp -CTTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred -cccc---cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 0011 1234667788899999999999999999999998765543
No 106
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.4e-38 Score=321.94 Aligned_cols=244 Identities=22% Similarity=0.326 Sum_probs=188.5
Q ss_pred hhccccccCcceEEEEEeCCC----cEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEc-CCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVLDGG----DVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNG-KDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~----~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lV~Ey 408 (640)
..++||+|+||.||+|+..+. ..||+|.+.... ..+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 357899999999999986432 258999987543 23567889999999999999999999754 5678999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~ 488 (640)
+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999997543 2578999999999999999999954 5999999999999999999999999999765321
Q ss_pred ----------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCc-chHHHHHHhhccccc
Q 006559 489 ----------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGEL-GIVKWVQMMGQDESA 556 (640)
Q Consensus 489 ----------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~-~~~~~~~~~~~~~~~ 556 (640)
..++..|+|||++ ....++.++|||||||++|||+| |.+||..... ...... ......
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~ 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESL-------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL---LQGRRL 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH---HTTCCC
T ss_pred chhccccccCCCCCccccChHHh-------cCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH---hcCCCC
Confidence 2335679999964 34567789999999999999999 5566654322 111111 111000
Q ss_pred ccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 557 WEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 557 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. .+... ...+.+++..||+.||++|||+.++++.|+++...
T Consensus 252 ---~-----~~~~~---~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 252 ---L-----QPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp ---C-----CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---C-----CCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0 01111 23467788889999999999999999999998764
No 107
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-38 Score=331.78 Aligned_cols=249 Identities=20% Similarity=0.360 Sum_probs=194.5
Q ss_pred hhccccccCcceEEEEEeC--------CCcEEEEEEecccc---chHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEE
Q 006559 337 SAELLGKGCVGATYKVVLD--------GGDVVVVKRIRERK---KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFL 404 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~---~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 404 (640)
..+.||+|+||.||+|+.. ++..||||+++... ..+.+.+|+++++++ +||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 3578999999999999863 46789999997653 235677899999999 89999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCCCC-----------CCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC
Q 006559 405 VYDYLPHGSLHSLLHGSRGPG-----------RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN 473 (640)
Q Consensus 405 V~Ey~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~ 473 (640)
||||+++|+|.+++......+ ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCCCC
Confidence 999999999999998654211 12488999999999999999999954 5999999999999999999
Q ss_pred eEEccCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchH
Q 006559 474 ACISDIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIV 544 (640)
Q Consensus 474 ~kl~DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~ 544 (640)
+||+|||+++..... ...+..|+|||++. ...++.++|||||||++|||+| |+.||......
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-------DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH-------HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhc-------CCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 999999999765432 23356799999653 3456789999999999999999 99999754322
Q ss_pred HHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 545 KWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
...+........ .... ....++.+++..||+.||++||++.++++.|+++...
T Consensus 267 ~~~~~~~~~~~~--------~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 267 ELFKLLKEGHRM--------DKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHHHHHHHTCCC--------CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC--------CCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 222211111000 0011 1223467788889999999999999999999998754
No 108
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.3e-38 Score=321.47 Aligned_cols=245 Identities=25% Similarity=0.411 Sum_probs=195.2
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..+.||+|+||.||+|+..++..||||.+... ...+.+.+|++++++++||||+++++++. .+..++||||+++|+|.
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 35689999999999999988889999999765 34677889999999999999999999986 45689999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-------
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP------- 488 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~------- 488 (640)
+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9997432 12488999999999999999999954 5999999999999999999999999999876432
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||..... .+..+....... ....
T Consensus 170 ~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~--------~~~~ 232 (279)
T 1qpc_A 170 AKFPIKWTAPEAI-------NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYR--------MVRP 232 (279)
T ss_dssp CCCCTTTSCHHHH-------HHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCC--------CCCC
T ss_pred CCCccCccChhhh-------ccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHHHHhcccC--------CCCc
Confidence 2235679999965 33456789999999999999999 8999975322 122222111100 0011
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.. ...++.+++..||+.||++|||+.++++.|+++...
T Consensus 233 ~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 233 DN---CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc---ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 11 123566788889999999999999999999998755
No 109
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=324.15 Aligned_cols=243 Identities=23% Similarity=0.290 Sum_probs=192.7
Q ss_pred ccccccCcceEEEEEeC---CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 339 ELLGKGCVGATYKVVLD---GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~---~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
+.||+|+||.||+|... ++..||||.++... ..+.+.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEEEeCCCC
Confidence 47999999999999853 57789999998642 3456888999999999999999999994 56799999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---- 488 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---- 488 (640)
+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (287)
T 1u59_A 95 PLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 167 (287)
T ss_dssp EHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred CHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCccee
Confidence 9999997543 2589999999999999999999954 5999999999999999999999999999876321
Q ss_pred -----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccch
Q 006559 489 -----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 489 -----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 562 (640)
..++..|+|||++ ....++.++|||||||++|||+| |+.||...... ...........
T Consensus 168 ~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~~------- 231 (287)
T 1u59_A 168 TARSAGKWPLKWYAPECI-------NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKR------- 231 (287)
T ss_dssp CCCCSSCCCGGGCCHHHH-------HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCC-------
T ss_pred eccccccccccccCHHHh-------ccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCCc-------
Confidence 1236789999965 33456789999999999999999 99999753321 11111111100
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
...+. ....++.+++..||+.||++||++.++++.|+++....
T Consensus 232 -~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 232 -MECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp -CCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCC---CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 00111 12235667888899999999999999999999987553
No 110
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=334.41 Aligned_cols=240 Identities=18% Similarity=0.266 Sum_probs=189.8
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
..+.||+|+||.||+|+.. ++..||+|.+... .....+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 3568999999999999964 6889999998755 234568899999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC--CCCeEEccCCcccccCCC---
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ--LGNACISDIGVHQLFHTP--- 488 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~--~~~~kl~DfGl~~~~~~~--- 488 (640)
|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 135 L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAED----YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999997543 2589999999999999999999954 5999999999999974 578999999999876532
Q ss_pred --ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 489 --FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 489 --~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
..+|..|+|||++. ...++.++|||||||++|||+||+.||..... ............. ++...
T Consensus 208 ~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~---~~~~~-- 273 (387)
T 1kob_A 208 KVTTATAEFAAPEIVD-------REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDWE---FDEDA-- 273 (387)
T ss_dssp EEECSSGGGCCHHHHT-------TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCCC---CCSST--
T ss_pred eeeccCCCccCchhcc-------CCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCC---CCccc--
Confidence 34688999999753 34567899999999999999999999975432 1222221111100 01000
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
......++.+++..||+.||++|||+.++++
T Consensus 274 ---~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 274 ---FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ---TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0112234667888899999999999999875
No 111
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.7e-38 Score=337.52 Aligned_cols=233 Identities=17% Similarity=0.259 Sum_probs=182.0
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc-----chHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-----KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..++||+|+||.||+|+.. +++.||||+++... ..+.+..|..++.++ +|||||++++++...+..|+||||+
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~ 135 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence 3578999999999999965 57789999997542 223467788888776 8999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC---
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH--- 486 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~--- 486 (640)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 136 NGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp TTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 9999999997543 589999999999999999999954 59999999999999999999999999998632
Q ss_pred ---CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc------hHHHHHHhhcccccc
Q 006559 487 ---TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG------IVKWVQMMGQDESAW 557 (640)
Q Consensus 487 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~~ 557 (640)
....+|..|+|||++. ...++.++|||||||++|||++|+.||...... ...++..
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~-------~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~-------- 272 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILR-------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------- 272 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH--------
T ss_pred CccccccCCcccCCchhhc-------CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH--------
Confidence 2346789999999753 345778999999999999999999999632111 0111100
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
.+.......+...+ .++.+++..||+.||++||++
T Consensus 273 ~i~~~~~~~p~~~s---~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 273 VILEKQIRIPRSLS---VKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHCCCCCCTTSC---HHHHHHHHHHTCSCTTTSTTC
T ss_pred HHhccccCCCCcCC---HHHHHHHHHHhcCCHhHcCCC
Confidence 01111111112222 345677788999999999995
No 112
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.7e-38 Score=333.38 Aligned_cols=239 Identities=20% Similarity=0.214 Sum_probs=181.2
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
..+.||+|+||.||+++.. +++.||||++... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 3568999999999999965 6889999999765 3456788999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC--eEEccCCcccccC-----C
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN--ACISDIGVHQLFH-----T 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~--~kl~DfGl~~~~~-----~ 487 (640)
.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++... .
T Consensus 104 ~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNAG-----RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 99987543 58899999999999999999995 45999999999999987765 9999999987532 2
Q ss_pred CccccccccCCccccCCCCccccCCCC-CccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhcccccccccchhh
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFW-QRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~-~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++.. ..++ .++|||||||++|||++|+.||..... ......+....... ..
T Consensus 176 ~~~gt~~y~aPE~~~~-------~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------~~ 241 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLR-------QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-------SI 241 (361)
T ss_dssp -----CTTSCHHHHHC-------SSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC-------CC
T ss_pred CCcCCCCcCChhhhcC-------CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-------CC
Confidence 3456889999997533 2333 348999999999999999999974321 22222222111100 00
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..... ...++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~---~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 242 PDDIR---ISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CTTSC---CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCcCC---CCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 00001 1234667888899999999999999975
No 113
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-38 Score=321.26 Aligned_cols=241 Identities=24% Similarity=0.326 Sum_probs=185.7
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+++. .++..||+|++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 367899999999999996 457889999987652 3467889999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE---CCCCCeEEccCCcccccCC--
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV---DQLGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGl~~~~~~-- 487 (640)
+|.+++..... ....+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99998854311 01258899999999999999999995 459999999999999 4568899999999976542
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...++..|+|||++. ..++.++|||||||++|||++|+.||......... ............
T Consensus 182 ~~~~~~~t~~y~aPE~~~--------~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~--~~~~~~~~~~~~----- 246 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK--------RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--QKATYKEPNYAV----- 246 (285)
T ss_dssp -----CTTGGGCCHHHHT--------TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHCCCCCCC-----
T ss_pred cCcCcccccCcCChHHhc--------cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH--hhhccCCccccc-----
Confidence 234688999999652 34678999999999999999999999754322211 111111000000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......++.+++.+||+.||++|||+.|+++
T Consensus 247 ----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 ----ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ----ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00001234667888899999999999999874
No 114
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.2e-38 Score=324.18 Aligned_cols=250 Identities=14% Similarity=0.189 Sum_probs=191.9
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEE-EcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYC-NGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lV~Ey~~~gsL 414 (640)
..+.||+|+||.||+|+. .+++.||||.+........+.+|+++++.++|++++..++++ ...+..++||||+ +|+|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 357899999999999995 668899999877665556688899999999998888777666 5567889999999 9999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE---CCCCCeEEccCCcccccCC----
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV---DQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGl~~~~~~---- 487 (640)
.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 92 ~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 92 EDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 999975432 589999999999999999999954 59999999999999 7889999999999986532
Q ss_pred ---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHHHHhhcccccc
Q 006559 488 ---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWVQMMGQDESAW 557 (640)
Q Consensus 488 ---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~ 557 (640)
...++..|+|||++. ...++.++|||||||++|||+||+.||...... .........
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~------ 231 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHL-------GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS------ 231 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHT-------TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH------
T ss_pred ccCCCCcccccCCCccccchHHhc-------CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh------
Confidence 234588999999753 345678999999999999999999999742211 111111100
Q ss_pred cccchhhccCh--HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 558 EVFDFELIMDK--EMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 558 ~~~d~~~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
......+. .......++.+++..||+.||++|||+.++++.|+++..+..
T Consensus 232 ---~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 232 ---EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ---HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ---cccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00000000 001113457778888999999999999999999999886644
No 115
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=333.55 Aligned_cols=250 Identities=15% Similarity=0.135 Sum_probs=184.2
Q ss_pred hhccccccCcceEEEEEeC----CCcEEEEEEeccccc-------------hHHHHHHHHHHhccCCCcccceeEEEEc-
Q 006559 337 SAELLGKGCVGATYKVVLD----GGDVVVVKRIRERKK-------------KREVDEWLRVIGGLRHSNIVSIRAYCNG- 398 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~-------------~~~~~~e~~~l~~l~H~niv~l~~~~~~- 398 (640)
..+.||+|+||.||+|+.. .+..+|||.+..... .+.+.+|+..++.++||||+++++++..
T Consensus 41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence 3578999999999999975 567899999875421 1235567788899999999999999987
Q ss_pred ---CCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC--C
Q 006559 399 ---KDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG--N 473 (640)
Q Consensus 399 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~--~ 473 (640)
....|+||||+ +++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 67899999999 999999997543 589999999999999999999954 599999999999999877 9
Q ss_pred eEEccCCcccccCC-------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 006559 474 ACISDIGVHQLFHT-------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGE 540 (640)
Q Consensus 474 ~kl~DfGl~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~ 540 (640)
+||+|||+++.+.. ...++..|+|||++ ....++.++|||||||++|||+||+.||....
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 264 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH-------KGVALSRRSDVEILGYCMLRWLCGKLPWEQNL 264 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH-------HTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHh-------cCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 99999999976531 23468899999965 33457889999999999999999999996422
Q ss_pred cchHHH--HHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 541 LGIVKW--VQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 541 ~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
...... .......... ..... .... .....++.+++..||+.||++||++.+|++.|+++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 265 KDPVAVQTAKTNLLDELP-QSVLK-WAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp TCHHHHHHHHHHHHHTTT-HHHHH-HSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cccHHHHHHHHhhccccc-HHHHh-hccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 221111 1110000000 00000 0000 0122357778888999999999999999999988764
No 116
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.1e-39 Score=335.93 Aligned_cols=256 Identities=26% Similarity=0.393 Sum_probs=191.8
Q ss_pred hhccccccCcceEEEEEe-----CCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEc--CCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVL-----DGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNG--KDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-----~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lV~E 407 (640)
..+.||+|+||.||+|++ .++..||||++... ...+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 357899999999999984 45788999999765 234568899999999999999999999874 457999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999997532 258999999999999999999995 4599999999999999999999999999986542
Q ss_pred ---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 488 ---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 488 ---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
...++..|+|||++ ....++.++|||||||++|||+||+.||......................
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESL-------SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHH-------HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH
T ss_pred CCccceeeccCCccccccCHHHh-------ccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH
Confidence 12346679999964 33456789999999999999999999986422111110000000000000
Q ss_pred ---ccch--hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 559 ---VFDF--ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 559 ---~~d~--~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
.... ...... .....+.+++..||+.||++|||+.++++.|+.+....
T Consensus 253 ~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 253 LLELLEEGQRLPAPP---ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HHHHhhcccCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 0000 000111 22345677888899999999999999999999987653
No 117
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-38 Score=319.95 Aligned_cols=247 Identities=20% Similarity=0.271 Sum_probs=190.2
Q ss_pred hhccccccCcceEEEEEeCC-C---cEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeE-EEEEec
Q 006559 337 SAELLGKGCVGATYKVVLDG-G---DVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDEL-FLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~-~---~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lV~Ey 408 (640)
..++||+|+||.||+|+..+ + ..||+|.+.... ..+.+.+|++++++++||||+++++++...+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 35789999999999998532 2 269999987543 235678899999999999999999999876654 999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT- 487 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~- 487 (640)
+.+|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999997643 2578999999999999999999954 599999999999999999999999999975432
Q ss_pred ---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCC-CCCCCcchHHHHHHhhcccccc
Q 006559 488 ---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMA-KGDGELGIVKWVQMMGQDESAW 557 (640)
Q Consensus 488 ---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~ 557 (640)
...++..|+|||.+ ....++.++|||||||++|||+||..| +....... ..........
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~~~~~-- 246 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESL-------QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD--LTHFLAQGRR-- 246 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHH-------TTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG--HHHHHHTTCC--
T ss_pred cccccccCcCCCCCccccChhhh-------ccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH--HHHHhhcCCC--
Confidence 12346789999964 344677899999999999999996555 44322111 1111111100
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
...... ....+.+++..||+.||++|||+.++++.|+++.....
T Consensus 247 ------~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 247 ------LPQPEY---CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp ------CCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred ------CCCCcc---chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 001111 12346678888999999999999999999999876543
No 118
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=332.16 Aligned_cols=243 Identities=13% Similarity=0.151 Sum_probs=187.6
Q ss_pred hhccccccCcceEEEEE------eCCCcEEEEEEeccccchHHHHHHHHHHhccC---CCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVV------LDGGDVVVVKRIRERKKKREVDEWLRVIGGLR---HSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|. ...++.||||++... ...++..|+++++.++ |+||+++++++...+..|+|||
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 35789999999999994 456888999999754 3456677777777766 9999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC-----------CCCeEE
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ-----------LGNACI 476 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~-----------~~~~kl 476 (640)
||++|+|.+++..........++|..++.++.|++.||+|||+ .+||||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccccCCEEE
Confidence 9999999999974322222368999999999999999999995 55999999999999998 899999
Q ss_pred ccCCcccccC--------CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHH
Q 006559 477 SDIGVHQLFH--------TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQ 548 (640)
Q Consensus 477 ~DfGl~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~ 548 (640)
+|||+++.+. ....+|..|+|||++ ....++.++|||||||++|||+||+.||......
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------ 291 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML-------SNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG------ 291 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHH-------TTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHh-------cCCCCCccccHHHHHHHHHHHHhCCCccccCCCC------
Confidence 9999996542 234568999999975 3345788999999999999999999998632110
Q ss_pred HhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHHhhcc
Q 006559 549 MMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDR-PNMSIVHRMIEDIRTK 608 (640)
Q Consensus 549 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Ps~~~v~~~L~~i~~~ 608 (640)
.+. .+...... ...+.. .+++..|++.+|.+| |+++++.+.|+++...
T Consensus 292 -------~~~-~~~~~~~~-~~~~~~---~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 292 -------ECK-PEGLFRRL-PHLDMW---NEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -------EEE-ECSCCTTC-SSHHHH---HHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -------cee-echhcccc-CcHHHH---HHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 000 00000000 112333 345556999999998 6788999999987755
No 119
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.6e-38 Score=320.99 Aligned_cols=245 Identities=25% Similarity=0.348 Sum_probs=189.5
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcC-CeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGK-DELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lV~Ey~~~gsL~ 415 (640)
..+.||+|+||.||++... |..||||.++.....+.+.+|++++++++||||+++++++... +..++||||+++|+|.
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred EEeEEecCCCceEEEEEEc-CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 3578999999999999875 7889999998776677889999999999999999999997654 4789999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC---cccc
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---FFIN 492 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---~~~~ 492 (640)
+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...+
T Consensus 104 ~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 177 (278)
T 1byg_A 104 DYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177 (278)
T ss_dssp HHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------------CC
T ss_pred HHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccCCCcc
Confidence 9997532 12378899999999999999999954 5999999999999999999999999998765432 2346
Q ss_pred ccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccchhhccChHHH
Q 006559 493 DAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEME 571 (640)
Q Consensus 493 ~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 571 (640)
..|+|||++ ....++.++||||||+++|||+| |+.||...... ........... ......
T Consensus 178 ~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~--------~~~~~~-- 238 (278)
T 1byg_A 178 VKWTAPEAL-------REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYK--------MDAPDG-- 238 (278)
T ss_dssp TTTSCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTCC--------CCCCTT--
T ss_pred ccccCHHHh-------CCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCC--------CCCccc--
Confidence 789999964 34567789999999999999999 99999754322 11111111100 001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 572 EEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 572 ~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
....+.+++..||+.||++||++.++++.|+++...
T Consensus 239 -~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 239 -CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp -CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 123466778889999999999999999999999865
No 120
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-38 Score=342.12 Aligned_cols=235 Identities=19% Similarity=0.314 Sum_probs=189.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc-----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+|+++++.++||||+++++++...+..|+||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 567999999999999965 68999999997542 235688999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 101 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~ 172 (476)
T 2y94_A 101 GELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172 (476)
T ss_dssp EEHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence 99999997543 58999999999999999999994 5699999999999999999999999999987643
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
...+|..|+|||++.+. ...+.++||||+||++|||++|+.||.+.... ...+..... ....
T Consensus 173 ~~~~gt~~y~aPE~~~~~------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~---------~~~~ 235 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGR------LYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFKKICDG---------IFYT 235 (476)
T ss_dssp CCCCSCSTTCCHHHHTTC------CBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHHHHHTT---------CCCC
T ss_pred cccCCCcCeEChhhccCC------CCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcC---------CcCC
Confidence 23568899999976432 12357899999999999999999999754322 111111111 0011
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+.... .++.+++.+||+.||++|||+.++++
T Consensus 236 p~~~s---~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 236 PQYLN---PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CTTCC---HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CccCC---HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11111 24667788899999999999999975
No 121
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.1e-38 Score=322.28 Aligned_cols=251 Identities=14% Similarity=0.184 Sum_probs=194.4
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEE-EcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYC-NGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lV~Ey~~~gsL 414 (640)
..+.||+|+||.||+|+. .+++.||||.+......+.+.+|+++++.++|++++..++++ ...+..++||||+ +|+|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 3uzp_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCH
Confidence 357899999999999995 678899999988766667788999999999998877766665 5567889999999 8999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE---CCCCCeEEccCCcccccCC----
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV---DQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGl~~~~~~---- 487 (640)
.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 92 EDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 99997443 2589999999999999999999954 59999999999999 4889999999999876532
Q ss_pred ---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHHHHhhcccccc
Q 006559 488 ---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWVQMMGQDESAW 557 (640)
Q Consensus 488 ---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~ 557 (640)
...++..|+|||++ ....++.++|||||||++|||+||+.||...... .........
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~------ 231 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTH-------LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS------ 231 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHH-------TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH------
T ss_pred cccccccccccccccccCChhhh-------cCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc------
Confidence 22457889999975 3345678999999999999999999999742211 100010000
Q ss_pred cccchhhccCh--HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCC
Q 006559 558 EVFDFELIMDK--EMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGSI 611 (640)
Q Consensus 558 ~~~d~~~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~~ 611 (640)
........ .......++.+++..||+.||++||++.++++.|+++..+...
T Consensus 232 ---~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 232 ---EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ---HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ---ccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 00000000 0011224577788889999999999999999999999876543
No 122
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.1e-38 Score=316.34 Aligned_cols=238 Identities=20% Similarity=0.277 Sum_probs=187.9
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||.||+|+.. +++.||||.+.... ..+.+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 568999999999999965 68899999987542 34668889999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC-------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH------- 486 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~------- 486 (640)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 92 L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred HHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 999997542 588999999999999999999954 59999999999999999999999999987542
Q ss_pred -CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 487 -TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 487 -~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
....++..|+|||++... ..++.++|||||||++|||+||+.||.........+......... ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~--- 230 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRR------EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----LNP--- 230 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCS------SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT----STT---
T ss_pred ccCCccccCccChHHHhcC------CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc----cCc---
Confidence 223468889999975322 223578999999999999999999997543322222211111100 000
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.. .....+.+++..||+.||++|||+.++++
T Consensus 231 -~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 -WK---KIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -GG---GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -hh---hcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 01 11234567788899999999999998865
No 123
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.5e-38 Score=328.92 Aligned_cols=253 Identities=19% Similarity=0.215 Sum_probs=185.2
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhc-cCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGG-LRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~-l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.++||+|+||.||+|+. .+++.||||++... ...+.+.+|++++.+ ++||||+++++++...+..|+||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 35799999999999994 56889999999754 335678889999888 579999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC---eEEccCCcccccCC---
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN---ACISDIGVHQLFHT--- 487 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl~~~~~~--- 487 (640)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 98 L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 98 ILSHIHKRR-----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred HHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999997543 588999999999999999999954 5999999999999998776 99999999876431
Q ss_pred ----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcc----
Q 006559 488 ----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQD---- 553 (640)
Q Consensus 488 ----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~---- 553 (640)
...+|..|+|||++.... .....++.++|||||||++|||+||+.||.........|.......
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFS--EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTS--HHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred cccccccccccccCCcCccChHHhhccc--ccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 123688999999753210 0113467899999999999999999999975432211111000000
Q ss_pred cccccccchhhccCh-HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 554 ESAWEVFDFELIMDK-EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 554 ~~~~~~~d~~~~~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.....+.......+. .......++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 000000000000010 01112345778888999999999999999875
No 124
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-38 Score=333.46 Aligned_cols=233 Identities=22% Similarity=0.341 Sum_probs=185.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
.++||+|+||.||+|+.. +++.||||.++.. ...+.+..|.+++..+ +||||+++++++...+..|+||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 578999999999999975 5888999999754 2334566788888766 89999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC----
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---- 486 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~---- 486 (640)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 102 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 999999997543 588999999999999999999954 59999999999999999999999999987642
Q ss_pred --CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 487 --TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 487 --~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
....+|..|+|||++. ...++.++|||||||++|||++|+.||...... ...+...... .
T Consensus 174 ~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~---------~ 235 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILL-------GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDN---------P 235 (345)
T ss_dssp CBCCCCSCGGGCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC---------C
T ss_pred cccCCCCCcccCChhhhc-------CCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhCC---------C
Confidence 2345688999999753 345778999999999999999999999754321 1111111110 0
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMS-IVH 599 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~-~v~ 599 (640)
..+...+ .++.+++.+||+.||++||++. ++.
T Consensus 236 ~~p~~~s---~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 FYPRWLE---KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCCTTSC---HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCCcccC---HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0111122 2456677889999999999997 654
No 125
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.3e-38 Score=328.25 Aligned_cols=235 Identities=18% Similarity=0.255 Sum_probs=180.2
Q ss_pred hhccccccCcceEEEEEe----CCCcEEEEEEecccc------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVL----DGGDVVVVKRIRERK------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~----~~~~~vavK~l~~~~------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 406 (640)
..+.||+|+||.||+++. .+++.||+|+++... ....+.+|++++++++||||+++++++...+..|+||
T Consensus 21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEE
Confidence 357899999999999986 478899999997542 2345678999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999997543 478899999999999999999954 59999999999999999999999999987542
Q ss_pred ------CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccccc
Q 006559 487 ------TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVF 560 (640)
Q Consensus 487 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (640)
....+|..|+|||++. ...++.++|||||||++|||++|+.||...... ...+.....
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~------- 236 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILM-------RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KTIDKILKC------- 236 (327)
T ss_dssp ------CTTSSCCTTSCHHHHT-------TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHT-------
T ss_pred cCCccccccCCCcCccCHhhCc-------CCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhC-------
Confidence 2245688999999753 345678999999999999999999999754321 111111111
Q ss_pred chhhccChHHHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006559 561 DFELIMDKEMEEEMRALLQVALLCLAPLPKDRP-----NMSIVHR 600 (640)
Q Consensus 561 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~~v~~ 600 (640)
....+.... .++.+++.+||+.||++|| ++.++++
T Consensus 237 --~~~~p~~~~---~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 --KLNLPPYLT---QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --CCCCCTTSC---HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CCCCCCCCC---HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 111111122 3456777889999999999 5666653
No 126
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=324.52 Aligned_cols=249 Identities=21% Similarity=0.276 Sum_probs=187.3
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccc----hHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKK----KREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+.. +|+.||||++..... .+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 467999999999999975 588999999865532 355778999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 88 VLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp HHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred hHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 9999887543 488999999999999999999954 599999999999999999999999999987642
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-HHHHHHhhcc------------
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI-VKWVQMMGQD------------ 553 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~-~~~~~~~~~~------------ 553 (640)
...++..|+|||++.+ ...++.++|||||||++|||+||+.||....... ...+......
T Consensus 160 ~~~~~~~~y~aPE~~~~------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 160 DDEVATRWYRSPELLVG------DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ------GGGCCHHHHHT------CSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred CCCcCCccccChHHHhc------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence 2345888999997532 2456789999999999999999999997543221 1111111000
Q ss_pred ccc--ccccchhhccC--hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 554 ESA--WEVFDFELIMD--KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 554 ~~~--~~~~d~~~~~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... ....++..... .........+.+++..||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 00000000000 001122345778889999999999999999975
No 127
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=336.97 Aligned_cols=267 Identities=18% Similarity=0.209 Sum_probs=198.4
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCC--eEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKD--ELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lV~Ey~~ 410 (640)
..++||+|+||.||+|+.. +++.||||++... ...+.+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 3568999999999999975 4889999999754 23466778999999999999999999998755 7899999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE----CCCCCeEEccCCcccccC
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV----DQLGNACISDIGVHQLFH 486 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGl~~~~~ 486 (640)
+|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999976432 12389999999999999999999954 59999999999999 788889999999998764
Q ss_pred C-----CccccccccCCccccCCCCc-cccCCCCCccchHHHHHHHHHHHhCCCCCCCCC--cchHHHHHHhh-ccc-cc
Q 006559 487 T-----PFFINDAYNAPELKFNNNNN-YSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGE--LGIVKWVQMMG-QDE-SA 556 (640)
Q Consensus 487 ~-----~~~~~~~y~aPE~~~~~~~~-~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~--~~~~~~~~~~~-~~~-~~ 556 (640)
. ...+|..|+|||++...... .....++.++|||||||++|||+||+.||.... ....+.+.... ... ..
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 3 23568899999975321100 001356678999999999999999999986321 11122221111 110 00
Q ss_pred cc-c-------cc--hhhccCh-HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 557 WE-V-------FD--FELIMDK-EMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 557 ~~-~-------~d--~~~~~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
+. . ++ ....... ........+.+++..||+.||++||++.++++.++++..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00 0 00 0000000 1133445667788889999999999999999999998654
No 128
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.8e-38 Score=323.71 Aligned_cols=248 Identities=19% Similarity=0.222 Sum_probs=188.6
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc-----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|+.. +++.||||.+.... ..+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 3578999999999999965 68889999987542 13567889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+++|.+++.... ++++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 118 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 999999997543 588999999999999999999954 599999999999999999999999999876543
Q ss_pred ----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 488 ----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
...++..|+|||++ ....++.++||||||+++|||+||+.||........ ......... .+.
T Consensus 190 ~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~-----~~~ 255 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERF-------SESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM--GAHINQAIP-----RPS 255 (309)
T ss_dssp -------CCGGGCCGGGT-------CC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH--HHHHHSCCC-----CGG
T ss_pred ccccccCCCcCccCHHHH-------cCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH--HHHhccCCC-----Ccc
Confidence 23457889999965 334567899999999999999999999975432211 111111100 000
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHhhccCC
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRP-NMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~~v~~~L~~i~~~~~ 610 (640)
.... ....++.+++.+||+.||++|| ++.++++.|+++.....
T Consensus 256 -~~~~---~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 256 -TVRP---GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp -GTST---TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred -ccCC---CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 0011 1122466778889999999999 99999999999876543
No 129
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.3e-38 Score=331.08 Aligned_cols=229 Identities=21% Similarity=0.288 Sum_probs=183.3
Q ss_pred hccccccCcceEEEEEeCC-CcEEEEEEeccc-----cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccC
Q 006559 338 AELLGKGCVGATYKVVLDG-GDVVVVKRIRER-----KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~l~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
.++||+|+||.||+|+... ++.||||+++.. ...+.+..|.+++..+ +||||+++++++...+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 5689999999999999764 788999999754 2345577888899887 79999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC----
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---- 486 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~---- 486 (640)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 999999997543 488999999999999999999954 59999999999999999999999999998632
Q ss_pred --CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 487 --TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 487 --~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
....+|..|+|||++. ...++.++|||||||++|||++|+.||..... ....+..... ..
T Consensus 177 ~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~---------~~ 238 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIA-------YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEH---------NV 238 (353)
T ss_dssp CBCCCCSCGGGCCHHHHT-------TCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC---------CC
T ss_pred ccccccCCccccChhhhc-------CCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHHhC---------CC
Confidence 2345689999999753 34577899999999999999999999975432 1222221111 11
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
..+...+ .++.+++..||+.||++||++
T Consensus 239 ~~p~~~s---~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 239 AYPKSMS---KEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp CCCTTSC---HHHHHHHHHHTCSCTTSCTTC
T ss_pred CCCCCCC---HHHHHHHHHHhhcCHHHcCCC
Confidence 1111222 346667788999999999964
No 130
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.5e-38 Score=329.52 Aligned_cols=251 Identities=15% Similarity=0.168 Sum_probs=188.2
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-------cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-------KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
..+.||+|+||.||+|+. .++..||+|.+... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 357899999999999996 46788999998643 2335688899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCC-----------------------------------CCCCCcCHHHHHHHHHHHHHHHHHhhcCCC
Q 006559 409 LPHGSLHSLLHGSRG-----------------------------------PGRMPVDWNKRLKLASDSAKGLAFLHGYNK 453 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~-----------------------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 453 (640)
+++|+|.+++..... .....+++..+..++.|++.||+|||+.
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-- 187 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ-- 187 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 999999999852110 0011345677888999999999999954
Q ss_pred CCceecCCCCCCeEECCCC--CeEEccCCcccccCC----------CccccccccCCccccCCCCccccCCCCCccchHH
Q 006559 454 AHLFHGHLSSSNIVVDQLG--NACISDIGVHQLFHT----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYS 521 (640)
Q Consensus 454 ~~ivHrdlk~~NILl~~~~--~~kl~DfGl~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~S 521 (640)
+|+||||||+|||++.++ .+||+|||+++.+.. ...+|..|+|||++.. ....++.++||||
T Consensus 188 -~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~~Diws 261 (345)
T 3hko_A 188 -GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT-----TNESYGPKCDAWS 261 (345)
T ss_dssp -TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC-----SSSCCCTHHHHHH
T ss_pred -CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc-----CCCCCCcHHHHHH
Confidence 599999999999998776 899999999976421 2346888999997632 2246778999999
Q ss_pred HHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-
Q 006559 522 FGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR- 600 (640)
Q Consensus 522 fGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~- 600 (640)
|||++|||+||+.||...... ............. .. +........+.+++..||+.||++||++.++++
T Consensus 262 lG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~--~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVNDA--DTISQVLNKKLCF--EN------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCT--TS------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHHHCCCCCCCCChH--HHHHHHHhccccc--CC------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 999999999999999754322 1111111111000 00 111112234667788899999999999999975
Q ss_pred -HHHHh
Q 006559 601 -MIEDI 605 (640)
Q Consensus 601 -~L~~i 605 (640)
.++++
T Consensus 332 p~~~~~ 337 (345)
T 3hko_A 332 PWISQF 337 (345)
T ss_dssp HHHHTT
T ss_pred hhhccC
Confidence 44443
No 131
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2e-38 Score=324.14 Aligned_cols=240 Identities=23% Similarity=0.293 Sum_probs=189.1
Q ss_pred cccccCcceEEEEEe---CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 340 LLGKGCVGATYKVVL---DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~---~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.||+|+||.||+|.. ..+..||||.++... ..+++.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 799999999999964 346789999987542 246688999999999999999999999 567789999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---- 488 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---- 488 (640)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (291)
T 1xbb_A 103 PLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174 (291)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence 9999998643 488999999999999999999954 5999999999999999999999999998876432
Q ss_pred -----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccch
Q 006559 489 -----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 489 -----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 562 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||....... ..+........
T Consensus 175 ~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~~~------ 239 (291)
T 1xbb_A 175 KAQTHGKWPVKWYAPECI-------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERM------ 239 (291)
T ss_dssp EC----CCCGGGCCHHHH-------HHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCC------
T ss_pred cccccCCCCceeeChHHh-------ccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHcCCCC------
Confidence 1234679999965 33456789999999999999999 999997543221 11111111000
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..+. .....+.+++..||+.||++||++.++++.|+++...
T Consensus 240 --~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 240 --GCPA---GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp --CCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --CCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0111 1223567788889999999999999999999998754
No 132
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.7e-38 Score=316.88 Aligned_cols=243 Identities=16% Similarity=0.212 Sum_probs=191.3
Q ss_pred hhccccccCcceEEEEEeCC-CcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 337 SAELLGKGCVGATYKVVLDG-GDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~-~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
..+.||+|+||.||+|+... +..||+|++... ...+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 35689999999999999654 678999998764 345678899999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE---CCCCCeEEccCCcccccCC---
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV---DQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGl~~~~~~--- 487 (640)
|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||++.....
T Consensus 93 L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHKR-----VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 999987543 58899999999999999999995 459999999999999 7889999999999876543
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
...++..|+|||++. ..++.++|||||||++|||+||+.||...... ............ ...
T Consensus 165 ~~~~~~t~~y~aPE~~~--------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~--~~~---- 228 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLE--------GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLKIREGTFT--FPE---- 228 (277)
T ss_dssp BCCCCSCTTTCCHHHHT--------TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCC--CCH----
T ss_pred hhccCCCCCccChHHhc--------ccCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCC--CCc----
Confidence 234688999999752 23778999999999999999999999754321 111111111000 000
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHh
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDI 605 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i 605 (640)
.........+.+++..||+.||++||++.++++ .+++.
T Consensus 229 --~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 229 --KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp --HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred --hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 000112345677888899999999999999974 44443
No 133
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=341.46 Aligned_cols=246 Identities=16% Similarity=0.175 Sum_probs=186.9
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.++||+|+||.||+++.. +++.||||++... ...+.+.+|..++..++||||+++++++.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 468999999999999974 6899999999753 1223477889999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 146 g~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~ 218 (412)
T 2vd5_A 146 GDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218 (412)
T ss_dssp CBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc
Confidence 99999997532 148899999999999999999995 4599999999999999999999999999976542
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++...........++.++|||||||++|||+||+.||...... +......... ...
T Consensus 219 ~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~-------~~~ 289 (412)
T 2vd5_A 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYGKIVHYK-------EHL 289 (412)
T ss_dssp ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTHH-------HHC
T ss_pred ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHHHHHhcc-------cCc
Confidence 2357899999997642111111345788999999999999999999999754321 1111111100 000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDR---PNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Ps~~~v~~ 600 (640)
..+........++.+++.+||. +|++| |++.|+.+
T Consensus 290 ~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 290 SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0010001122346677788999 99998 58888853
No 134
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.8e-38 Score=341.76 Aligned_cols=245 Identities=16% Similarity=0.212 Sum_probs=187.0
Q ss_pred hccccccCcceEEEEEeCC-CcEEEEEEecccc-----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLDG-GDVVVVKRIRERK-----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.++||+|+||+||+|+... ++.||||++.... ....+.+|..++..++||||++++++|.+.+..|+|||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 5689999999999999764 7889999997531 223478899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... ..+++..+..++.|++.||+|||+ .+||||||||+|||++.++.+||+|||+++....
T Consensus 159 g~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~ 231 (437)
T 4aw2_A 159 GDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231 (437)
T ss_dssp CBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred CcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc
Confidence 99999998632 258999999999999999999995 4599999999999999999999999999976532
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++.... .....++.++|||||||++|||+||+.||...... +......... ...
T Consensus 232 ~~~~~~GT~~Y~APE~l~~~~--~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~-------~~~ 300 (437)
T 4aw2_A 232 QSSVAVGTPDYISPEILQAME--GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIMNHK-------ERF 300 (437)
T ss_dssp ECCSCCSCGGGCCHHHHHHHH--TSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTHH-------HHC
T ss_pred ccccccCCcCeeChHHHhhcc--cCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--HHHHhhhhcc-------ccc
Confidence 245799999999763100 01345788999999999999999999999754321 1111111000 000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKD--RPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~~v~~ 600 (640)
..+........++.+++.+|+..+|++ ||++.|+.+
T Consensus 301 ~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 301 QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 001000011223556677788888888 999999864
No 135
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.3e-38 Score=317.87 Aligned_cols=234 Identities=20% Similarity=0.308 Sum_probs=186.4
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. ++..||||.+... .....+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 567999999999999865 5678999998653 2345688899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 165 (279)
T 3fdn_A 94 GTVYRELQKLS-----KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165 (279)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccccc
Confidence 99999987543 5889999999999999999999 45699999999999999999999999999865432
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...++..|+|||++ ....++.++||||||+++|||++|+.||...... ...+..... ....+
T Consensus 166 ~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~---------~~~~~ 227 (279)
T 3fdn_A 166 DLCGTLDYLPPEMI-------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRV---------EFTFP 227 (279)
T ss_dssp --CCCCTTCCHHHH-------TTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHT---------CCCCC
T ss_pred ccCCCCCccCHhHh-------ccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHHHhC---------CCCCC
Confidence 23568899999965 3345678999999999999999999999754321 111111110 00011
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... ...+.+++..||+.||++|||+.|+++
T Consensus 228 ~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 228 DFV---TEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp TTS---CHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CcC---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111 224567788899999999999999986
No 136
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.5e-38 Score=335.10 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=184.9
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc----chHHHHHHHHHHhccC--CCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK----KKREVDEWLRVIGGLR--HSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||++...+++.||||++.... ..+.+.+|++++++++ ||||+++++++...+..|+||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 357899999999999998889999999986542 2356788999999997 5999999999999999999999 56
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++.+..
T Consensus 139 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 139 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp SEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 889999998653 57888999999999999999995 4599999999999996 58999999999986532
Q ss_pred -----CccccccccCCccccCCCCc----cccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 488 -----PFFINDAYNAPELKFNNNNN----YSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 488 -----~~~~~~~y~aPE~~~~~~~~----~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
...+|..|+|||++...... .....++.++|||||||++|||++|+.||....... .............
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-~~~~~~~~~~~~~- 287 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKLHAIIDPNHEI- 287 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHCTTSCC-
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-HHHHHHhCccccC-
Confidence 23568899999986432111 112467889999999999999999999997532221 1111111111000
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+... ..++.+++..||+.||++||++.|+++
T Consensus 288 ------~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 288 ------EFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ------CCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------CCCccc---hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 001111 224667788899999999999999975
No 137
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.2e-38 Score=337.83 Aligned_cols=239 Identities=18% Similarity=0.272 Sum_probs=180.4
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 406 (640)
.+.||+|+||.||+|.. .+++.||||.+.... ....+.+|++++++++||||+++++++. .+..|+||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 56799999999999986 457899999987542 1124778999999999999999999986 45689999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC---CCeEEccCCccc
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL---GNACISDIGVHQ 483 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGl~~ 483 (640)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 219 e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 219 ELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp ECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecccce
Confidence 9999999999987543 589999999999999999999954 59999999999999754 459999999998
Q ss_pred ccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhccccc
Q 006559 484 LFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQDESA 556 (640)
Q Consensus 484 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~ 556 (640)
.... ...+|..|+|||++.. .....++.++|||||||++|||+||+.||..... .....+.....
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~---- 362 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVS----VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY---- 362 (419)
T ss_dssp SCC-----------CTTCCTTTTC--------CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC----
T ss_pred ecCCCccccccCCCCCccCceeeec----CCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC----
Confidence 7653 2346889999997532 1234577899999999999999999999975322 12211111000
Q ss_pred ccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 557 WEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 557 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. ..+ .........+.+++.+||+.||++||++.|+++
T Consensus 363 -~-~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 363 -N-FIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -C-CCH-----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -C-CCc-----hhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0 000 011122345777888999999999999999875
No 138
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-37 Score=328.02 Aligned_cols=189 Identities=22% Similarity=0.281 Sum_probs=161.9
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-cchHHHHHHHHHHhccC-----CCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-KKKREVDEWLRVIGGLR-----HSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~-----H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+|+. .+++.||||+++.. ...+.+..|++++++++ ||||+++++++...+..++||||+
T Consensus 39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 357899999999999996 56889999999754 33456677888888876 999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC-------------------
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ------------------- 470 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~------------------- 470 (640)
+++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.
T Consensus 119 -~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 119 -GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp -CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred -CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 8999999976532 248899999999999999999995 45999999999999985
Q ss_pred ------CCCeEEccCCcccccCC---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 006559 471 ------LGNACISDIGVHQLFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539 (640)
Q Consensus 471 ------~~~~kl~DfGl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~ 539 (640)
++.+||+|||+++.... ...+|..|+|||++. ...++.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVIL-------NLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHT-------TCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHc-------CCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 78999999999986543 345688999999753 345778999999999999999999999753
No 139
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-37 Score=317.71 Aligned_cols=238 Identities=22% Similarity=0.339 Sum_probs=185.7
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEc----CCeEEEEEec
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNG----KDELFLVYDY 408 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lV~Ey 408 (640)
.+.||+|+||.||+|.. .++..||+|.+.... ..+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 56799999999999986 457789999987542 23567889999999999999999999865 3568999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC-CCCCeEEccCCcccccCC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIGVHQLFHT 487 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGl~~~~~~ 487 (640)
+++|+|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||||+|||++ .++.+||+|||++.....
T Consensus 111 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred cCCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 99999999997543 5889999999999999999999542 3499999999999998 789999999999976543
Q ss_pred C----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 488 P----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ~----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
. ..++..|+|||++. ..++.++|||||||++|||+||+.||..... .....+......... ..
T Consensus 185 ~~~~~~~~t~~y~aPE~~~--------~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~-~~--- 251 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE--------EKYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRVTSGVKPA-SF--- 251 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG--------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHHTTTCCCG-GG---
T ss_pred cccccccCCcCcCCHHHHh--------ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-HHHHHHHHhccCCcc-cc---
Confidence 2 34688999999642 3477899999999999999999999975332 222222211111000 00
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+. ....++.+++..||+.||++|||+.++++
T Consensus 252 ---~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 ---DK---VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GG---CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CC---CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00 11134677888899999999999999875
No 140
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.8e-38 Score=318.45 Aligned_cols=242 Identities=20% Similarity=0.280 Sum_probs=189.1
Q ss_pred hhccccccCcceEEEEEeCC----CcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLDG----GDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~----~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+|+..+ +..||||.+... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 35789999999999998543 235999998765 234668889999999999999999999864 4578999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997543 248899999999999999999995 45999999999999999999999999998865432
Q ss_pred ------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcc-hHHHHHHhhccccccccc
Q 006559 489 ------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELG-IVKWVQMMGQDESAWEVF 560 (640)
Q Consensus 489 ------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 560 (640)
...+..|+|||++ ....++.++|||||||++|||+| |+.||...... ....+.. ....
T Consensus 168 ~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~---~~~~---- 233 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESI-------NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRL---- 233 (281)
T ss_dssp -----CCCCCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH---TCCC----
T ss_pred ccccccCCCCcceeCchhh-------ccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc---CCCC----
Confidence 2336679999964 34567789999999999999999 99999743222 2111111 1000
Q ss_pred chhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 006559 561 DFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRT 607 (640)
Q Consensus 561 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~ 607 (640)
..... ....+.+++.+||+.||++||++.++++.|+++..
T Consensus 234 ----~~~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 234 ----PKPDL---CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ----CCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCC---CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 00111 12346678888999999999999999999999864
No 141
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.9e-38 Score=334.24 Aligned_cols=238 Identities=16% Similarity=0.231 Sum_probs=178.5
Q ss_pred ccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHH-hccCCCcccceeEEEEc----CCeEEEEEeccCCC
Q 006559 339 ELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVI-GGLRHSNIVSIRAYCNG----KDELFLVYDYLPHG 412 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~~lV~Ey~~~g 412 (640)
++||+|+||+||+++.. +++.||||+++.. ..+.+|+.++ +..+||||+++++++.. .+..|+|||||++|
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg 144 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG 144 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc---hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCC
Confidence 57999999999999964 6889999998643 3456677665 44589999999999875 56799999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC---CCCeEEccCCcccccCC--
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl~~~~~~-- 487 (640)
+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 145 ~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 145 ELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp EHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred cHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 9999998643 23589999999999999999999954 5999999999999997 78999999999987642
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchH--HHHHHhhcccccccccch
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIV--KWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~d~ 562 (640)
...+|..|+|||++ ....++.++|||||||++|||+||+.||........ .......... .....+
T Consensus 219 ~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~--~~~~~~ 289 (400)
T 1nxk_A 219 SLTTPCYTPYYVAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNP 289 (400)
T ss_dssp --------CTTCCGGGS-------CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC--CCCCTT
T ss_pred ccccCCCCCCccCHhhc-------CCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc--ccCCCc
Confidence 23458899999975 345678899999999999999999999975322110 0011110000 000000
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......++.+++..||+.||++|||+.|+++
T Consensus 290 ------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 290 ------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp ------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01112235677888899999999999999976
No 142
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1e-38 Score=329.58 Aligned_cols=247 Identities=21% Similarity=0.268 Sum_probs=185.3
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEecccc-----chHHHHHHHHHHhccCCCcccceeEEEEcCC----eEEEEE
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERK-----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKD----ELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lV~ 406 (640)
..+.||+|+||.||+|+. .+++.||||+++... ....+.+|++++++++||||+++++++.... ..|+||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEE
Confidence 357899999999999995 668899999997642 1245778999999999999999999987643 359999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||+++|+|.++++... ++++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 96 e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 9999999999997543 589999999999999999999954 59999999999999999999999999987653
Q ss_pred C---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccc
Q 006559 487 T---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAW 557 (640)
Q Consensus 487 ~---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 557 (640)
. ...++..|+|||++ ....++.++|||||||++|||+||+.||.........+..... .. .
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~-~~-~- 237 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQA-------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DP-I- 237 (311)
T ss_dssp --------------CCTTCCHHHH-------HTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC-CC-C-
T ss_pred ccccccccccccCcCcccCCHHHh-------cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC-CC-C-
Confidence 2 12458899999975 3345778999999999999999999999754322221111111 00 0
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHH-HHHHHHHhhcc
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSI-VHRMIEDIRTK 608 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~-v~~~L~~i~~~ 608 (640)
.+. ... .....++.+++.+||+.||++||+..+ +...+.++...
T Consensus 238 ---~~~-~~~---~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 238 ---PPS-ARH---EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp ---CHH-HHS---TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred ---Ccc-ccc---CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 000 000 112335677888899999999997554 55666666543
No 143
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.5e-38 Score=343.48 Aligned_cols=236 Identities=20% Similarity=0.296 Sum_probs=182.0
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+|+. .+++.||||++... .....+.+|+++++.++||||++++++|...+..|+||||++
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 357899999999999995 46889999999754 123456678899999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC----
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---- 486 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~---- 486 (640)
+|+|.+++.... .+++..+..++.|++.||+|||+ ..+|+||||||+|||++.++.+||+|||+++...
T Consensus 232 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 232 GGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp SCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 999999997543 58899999999999999999995 1459999999999999999999999999987642
Q ss_pred --CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 487 --TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 487 --~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
....+|..|+|||++ ....++.++|||||||++|||+||+.||...... .......... .
T Consensus 305 ~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~---------~ 366 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVL-------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEE---------I 366 (446)
T ss_dssp --CCSSSCGGGCCHHHH-------HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC---------C
T ss_pred ccccccCCccccCHhhc-------CCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCC---------C
Confidence 234568899999975 3456788999999999999999999999754322 1111111110 0
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRP-----NMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~~v~~ 600 (640)
..+.... .++.+++..||+.||++|| ++.|+++
T Consensus 367 ~~p~~~~---~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RFPRTLG---PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCTTSC---HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCccCC---HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0111112 3466778889999999999 8888864
No 144
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=333.61 Aligned_cols=251 Identities=16% Similarity=0.114 Sum_probs=191.6
Q ss_pred hhccccccCcceEEEEEeCC---------CcEEEEEEeccccchHHHHHHHHHHhccCCCcccc---------------e
Q 006559 337 SAELLGKGCVGATYKVVLDG---------GDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVS---------------I 392 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~---------------l 392 (640)
..+.||+|+||.||+|+... ++.||||.+... +.+.+|++++++++||||++ +
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~ 122 (352)
T 2jii_A 46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC 122 (352)
T ss_dssp EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence 35789999999999999764 788999998754 45778899999999999988 6
Q ss_pred eEEEEc-CCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC
Q 006559 393 RAYCNG-KDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL 471 (640)
Q Consensus 393 ~~~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~ 471 (640)
++++.. .+..++||||+ +|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 123 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 123 MGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPE 195 (352)
T ss_dssp CEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETT
T ss_pred hhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCC
Confidence 777765 67899999999 999999998642 12589999999999999999999954 59999999999999999
Q ss_pred C--CeEEccCCcccccCC-------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 006559 472 G--NACISDIGVHQLFHT-------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAK 536 (640)
Q Consensus 472 ~--~~kl~DfGl~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~ 536 (640)
+ .+||+|||+++.+.. ...++..|+|||++ ....++.++|||||||++|||+||+.||
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH-------KGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH-------TTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHH-------ccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 8 999999999976532 22568899999965 3345778999999999999999999999
Q ss_pred CCCCcchH---HHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 537 GDGELGIV---KWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 537 ~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
........ .......... ....+.... .... ..++.+++..||+.||++||++.++++.|+++..+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKFVDKP--GPFVGPCGH-WIRP---SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp GGGTTCHHHHHHHHHHHHHSC--CCEECTTSC-EECC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccCCcCHHHHHHHHHhccCCh--hhhhhhccc-cCCC---cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 75322211 1111111110 001110000 0011 2346677888999999999999999999999886644
No 145
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.8e-37 Score=320.51 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=185.2
Q ss_pred hhccccccCcceEEEEEeC----CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCC-----eEE
Q 006559 337 SAELLGKGCVGATYKVVLD----GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKD-----ELF 403 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~----~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-----~~~ 403 (640)
..+.||+|+||.||+|+.. .+..||||.+.... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 4578999999999999854 24479999987542 2355788999999999999999999998754 359
Q ss_pred EEEeccCCCCHHHhhccCCC-CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcc
Q 006559 404 LVYDYLPHGSLHSLLHGSRG-PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH 482 (640)
Q Consensus 404 lV~Ey~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~ 482 (640)
+||||+++|+|.+++..... .....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999853321 122368999999999999999999994 56999999999999999999999999998
Q ss_pred cccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcc
Q 006559 483 QLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQD 553 (640)
Q Consensus 483 ~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 553 (640)
+..... ..++..|+|||++ ....++.++|||||||++|||+| |+.||....... ........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~ 265 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESL-------ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDYLLHG 265 (313)
T ss_dssp ----------------CCGGGSCHHHH-------HSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTT
T ss_pred eecccccccCcccccCCCccccCchhh-------cCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHHHHcC
Confidence 765321 2346689999964 34567789999999999999999 889987543221 11111111
Q ss_pred cccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 554 ESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 554 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
... .... ....++.+++..||+.||++||++.++++.|+++...
T Consensus 266 ~~~--------~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 266 HRL--------KQPE---DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCC--------CCBT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC--------CCCc---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 000 0011 1223567788889999999999999999999998754
No 146
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.7e-38 Score=337.83 Aligned_cols=241 Identities=17% Similarity=0.240 Sum_probs=187.4
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.++||+|+||.||+|+.. +++.||+|+++.. ...+.+.+|+++++.++|||||+++++|.+.+..|+|||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999975 5789999998753 2234577899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.++++.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 154 g~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 154 GDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred CcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 9999999753 378889999999999999999954 599999999999999999999999999976543
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++..... ...++.++|||||||++|||+||+.||...... ...+....... ....
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~---~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~-----~~~~ 294 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGG---DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMNHKN-----SLTF 294 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTT---TCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTHHH-----HCCC
T ss_pred cccCCcCCccccCHHHhhccCC---CcCCCCcceEecchHHHHHHHhCCCCCCCCChh--hHHHHHHhccc-----cccC
Confidence 3457899999998643211 112678999999999999999999999754321 11111111000 0000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKD--RPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~~v~~ 600 (640)
......+. ++.+++.+|+..+|++ ||++.||.+
T Consensus 295 p~~~~~s~---~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 295 PDDNDISK---EAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CTTCCCCH---HHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred CCcccccH---HHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 00011222 4556777799999988 999999875
No 147
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.8e-38 Score=329.89 Aligned_cols=231 Identities=18% Similarity=0.267 Sum_probs=181.8
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc-----chHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-----KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
.+.||+|+||.||+|+.. +++.||+|+++... ..+.+.+|..++.++ +||||+++++++...+..|+||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 568999999999999975 57889999997542 224467788888877 89999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC----
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---- 486 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~---- 486 (640)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 999999997543 588999999999999999999954 59999999999999999999999999998632
Q ss_pred --CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc------hHHH-HHHhhcccccc
Q 006559 487 --TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG------IVKW-VQMMGQDESAW 557 (640)
Q Consensus 487 --~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~------~~~~-~~~~~~~~~~~ 557 (640)
....+|..|+|||++. ...++.++|||||||++|||++|+.||...... .... .+...
T Consensus 166 ~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~------ 232 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILR-------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL------ 232 (345)
T ss_dssp CBCCCCSCGGGCCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHH------
T ss_pred cccccCCCccccCccccC-------CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHH------
Confidence 2345688999999753 345678999999999999999999999642110 0011 11111
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
......+...+ .++.+++.+||+.||++||++
T Consensus 233 ---~~~~~~p~~~s---~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 233 ---EKQIRIPRSLS---VKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---HCCCCCCTTSC---HHHHHHHHHHTCSSTTTSTTC
T ss_pred ---cCCCCCCCCCC---HHHHHHHHHHhcCCHhHCCCC
Confidence 11111111222 346667788999999999995
No 148
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=327.75 Aligned_cols=243 Identities=17% Similarity=0.227 Sum_probs=184.9
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc----chHHHHHHHHHHhccCC--CcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK----KKREVDEWLRVIGGLRH--SNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||++...+++.||||++.... ..+.+.+|++++++++| |||+++++++...+..++||| +.
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence 356899999999999998889999999987542 23567889999999987 999999999999999999999 56
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 92 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 92 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp SEEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 889999998653 588999999999999999999954 599999999999997 57899999999987532
Q ss_pred -----CccccccccCCccccCCCCc----cccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 488 -----PFFINDAYNAPELKFNNNNN----YSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 488 -----~~~~~~~y~aPE~~~~~~~~----~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
...+|..|+|||++...... .....++.++|||||||++|||+||+.||.................. ..
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~- 240 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH-EI- 240 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS-CC-
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc-cc-
Confidence 23568899999976431111 11256788999999999999999999999753322222211111110 00
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+... ..++.+++..||+.||++|||+.|+++
T Consensus 241 ------~~~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 241 ------EFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ------CCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------CCcccC---CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 001111 124667788899999999999999975
No 149
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.5e-37 Score=322.45 Aligned_cols=239 Identities=17% Similarity=0.255 Sum_probs=190.4
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc--------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK--------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. +|..||||.+.... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 3578999999999999965 58899999987542 24678899999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC----CeEEccCCccc
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG----NACISDIGVHQ 483 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGl~~ 483 (640)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 96 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 96 LVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 999999999997543 589999999999999999999954 599999999999999888 79999999998
Q ss_pred ccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 484 LFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 484 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
.... ...++..|+|||++ ....++.++|||||||++|||+||+.||..... ............
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~--- 235 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIV-------NYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITSVSY--- 235 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHH-------TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCC---
T ss_pred ecCccccccccCCCCCccCcccc-------cCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhccc---
Confidence 7643 23468899999965 334567899999999999999999999975322 111111111100
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+... .......+.+++..||+.||++|||+.|+++
T Consensus 236 ~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEF-----FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHH-----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhh-----hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011110 0112234677888999999999999999975
No 150
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.7e-38 Score=317.97 Aligned_cols=234 Identities=18% Similarity=0.272 Sum_probs=169.6
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+. .+++.||+|++... ...+.+.+|++++++++||||+++++++...+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 56799999999999985 56889999998754 23456889999999999999999999999999999999999 6
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 168 (275)
T 2eue_A 97 NELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168 (275)
T ss_dssp EEHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcccc
Confidence 78888876543 589999999999999999999954 599999999999999999999999999876543
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
...++..|+|||++... ...+.++|||||||++|||+||+.||...... ...+...... ...
T Consensus 169 ~~~~~t~~y~aPE~~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~---------~~~ 231 (275)
T 2eue_A 169 KTSCGSPNYAAPEVISGK------LYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGV---------YTL 231 (275)
T ss_dssp ------CTTCCHHHHCC-----------THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC---------CCC
T ss_pred cCCCCCcCcCCceeeeCC------CCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC---------CCC
Confidence 23468899999975322 22367899999999999999999999754322 1111111110 001
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+... ...+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~---~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 232 PKFL---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTTS---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CccC---CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1111 224667788899999999999999864
No 151
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=323.90 Aligned_cols=250 Identities=22% Similarity=0.277 Sum_probs=190.8
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEE----cCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCN----GKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~----~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+++. .+++.||||++... ...+.+.+|++++++++||||+++++++. .....++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 367899999999999996 67889999988644 34566889999999999999999999987 345789999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999875321 123589999999999999999999954 5999999999999999999999999998765321
Q ss_pred --------------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCC---CCcchHHHHHHhh
Q 006559 489 --------------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGD---GELGIVKWVQMMG 551 (640)
Q Consensus 489 --------------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~---~~~~~~~~~~~~~ 551 (640)
..++..|+|||++.... ...++.++|||||||++|||++|+.||.. ...........
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-- 262 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQS----HCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-- 262 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCS----EEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--
T ss_pred ccccccccccccccccCCcccCCHhHhccCC----CcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--
Confidence 12378899999753221 12357899999999999999999999852 11111111100
Q ss_pred cccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 552 QDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 552 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
. ....... .....+.+++.+||+.||++||++.++++.|+++...
T Consensus 263 -~--------~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 263 -Q--------LSIPQSP---RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -C----------CCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred -c--------CCCCccc---cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 0 0000011 1123567788889999999999999999999998754
No 152
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=315.59 Aligned_cols=235 Identities=20% Similarity=0.321 Sum_probs=173.6
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc-----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK-----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+. .+++.||||.+.... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 56899999999999996 578899999986542 235688899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... .++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 168 (278)
T 3cok_A 96 GEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK 168 (278)
T ss_dssp EEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred CcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc
Confidence 99999998543 2589999999999999999999954 599999999999999999999999999887542
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
...++..|+|||++. ...++.++|||||||++|||+||+.||........ .... ......
T Consensus 169 ~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~---------~~~~~~ 230 (278)
T 3cok_A 169 HYTLCGTPNYISPEIAT-------RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--LNKV---------VLADYE 230 (278)
T ss_dssp ------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------C---------CSSCCC
T ss_pred ceeccCCCCcCCcchhc-------CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--HHHH---------hhcccC
Confidence 234578899999653 34567899999999999999999999975332110 0000 000011
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.+... ..++.+++.+||+.||++|||+.++++
T Consensus 231 ~~~~~---~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 MPSFL---SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Ccccc---CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11111 234667888899999999999998875
No 153
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=328.05 Aligned_cols=229 Identities=19% Similarity=0.246 Sum_probs=184.6
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 406 (640)
.+.||+|+||.||+|+. .++..||||.+.... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 46899999999999985 568889999987542 2234667999999999999999999999999999999
Q ss_pred eccCCC-CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCccccc
Q 006559 407 DYLPHG-SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485 (640)
Q Consensus 407 Ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~ 485 (640)
||+..| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 109 e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp ECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999887 9999998653 589999999999999999999954 5999999999999999999999999999876
Q ss_pred CCC-----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccccc
Q 006559 486 HTP-----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVF 560 (640)
Q Consensus 486 ~~~-----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (640)
... ..+|..|+|||++... ..++.++|||||||++|||++|+.||..... . .....
T Consensus 181 ~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~------~~~~~ 241 (335)
T 3dls_A 181 ERGKLFYTFCGTIEYCAPEVLMGN------PYRGPELEMWSLGVTLYTLVFEENPFCELEE-------T------VEAAI 241 (335)
T ss_dssp CTTCCBCEECSCGGGCCHHHHTTC------CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------G------TTTCC
T ss_pred CCCCceeccCCCccccChhhhcCC------CCCCCcccchhHHHHHHHHHhCCCchhhHHH-------H------Hhhcc
Confidence 432 3468899999975322 1236789999999999999999999964110 0 00000
Q ss_pred chhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 561 DFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 561 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. .+... ..++.+++..||+.||++|||+.++++
T Consensus 242 ~----~~~~~---~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 242 H----PPYLV---SKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp C----CSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C----CCccc---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 11111 124667788899999999999999976
No 154
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.3e-38 Score=330.12 Aligned_cols=250 Identities=20% Similarity=0.315 Sum_probs=193.1
Q ss_pred hhccccccCcceEEEEEeCC-C-----cEEEEEEecccc---chHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVLDG-G-----DVVVVKRIRERK---KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~-~-----~~vavK~l~~~~---~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 406 (640)
..+.||+|+||.||+|+... + ..||+|.+.... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 35789999999999999643 2 379999997652 345678899999999 8999999999999999999999
Q ss_pred eccCCCCHHHhhccCCC---------CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEc
Q 006559 407 DYLPHGSLHSLLHGSRG---------PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACIS 477 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~ 477 (640)
||+++|+|.+++..... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEBC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEEC
Confidence 99999999999864310 0012578999999999999999999954 59999999999999999999999
Q ss_pred cCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHH
Q 006559 478 DIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQ 548 (640)
Q Consensus 478 DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~ 548 (640)
|||+++..... ..++..|+|||++ ....++.++|||||||++|||+| |+.||.........+ +
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~ 278 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESI-------FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY-K 278 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHH-------HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH-H
T ss_pred ccccccccccccceeecCCCCCCccccCHHHh-------ccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH-H
Confidence 99999865321 2235679999964 34457789999999999999999 999997543222111 1
Q ss_pred HhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 549 MMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 549 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
....... ...+.. ....+.+++..||+.||++|||+.++++.|+++..+
T Consensus 279 ~~~~~~~--------~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQ--------MAQPAF---APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCC--------CCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCC--------CCCCCC---CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1110000 000111 123467788889999999999999999999987643
No 155
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.9e-38 Score=326.68 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=194.2
Q ss_pred hhccccccCcceEEEEEeC------CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD------GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~------~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. .+..||||.+.... ....+.+|++++++++||||+++++++...+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 3578999999999999864 36789999997653 23457889999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCC-----CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcc
Q 006559 408 YLPHGSLHSLLHGSRG-----PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH 482 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~ 482 (640)
|+++|+|.+++..... ....++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999874320 1112568999999999999999999954 5999999999999999999999999998
Q ss_pred cccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcc
Q 006559 483 QLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQD 553 (640)
Q Consensus 483 ~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 553 (640)
+..... ..++..|+|||++ ....++.++|||||||++|||+| |+.||..... ....+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~ 256 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESL-------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVLRFVMEG 256 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HHHHHHHHTT
T ss_pred cccccccccccccCCCCCCCccChhhh-------ccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--HHHHHHHHcC
Confidence 765321 2336789999964 34557789999999999999999 8999875322 1112211111
Q ss_pred cccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 554 ESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 554 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
... . ... .....+.+++.+||+.||++|||+.++++.|+++...
T Consensus 257 ~~~----~----~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 257 GLL----D----KPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp CCC----C----CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CcC----C----CCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 100 0 011 1223466778889999999999999999999987653
No 156
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.6e-38 Score=333.03 Aligned_cols=186 Identities=26% Similarity=0.452 Sum_probs=150.5
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc----cchHHHHHHHHHHhccC-CCcccceeEEEEcCC--eEEEEEecc
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER----KKKREVDEWLRVIGGLR-HSNIVSIRAYCNGKD--ELFLVYDYL 409 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~~lV~Ey~ 409 (640)
.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+.++.++. ||||+++++++...+ ..|+|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 56899999999999985 56889999998643 23345678899999997 999999999997544 799999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC--
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-- 487 (640)
+ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 8 6999998753 478899999999999999999954 599999999999999999999999999976421
Q ss_pred -------------------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 006559 488 -------------------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539 (640)
Q Consensus 488 -------------------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~ 539 (640)
...+|..|+|||++.+ ...++.++|||||||++|||++|+.||.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG------STKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTT------CCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcC------CCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2356889999997632 245778999999999999999999999754
No 157
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.2e-38 Score=325.39 Aligned_cols=250 Identities=21% Similarity=0.308 Sum_probs=193.4
Q ss_pred hhccccccCcceEEEEEe------CCCcEEEEEEecccc---chHHHHHHHHHHhcc-CCCcccceeEEEEcCC-eEEEE
Q 006559 337 SAELLGKGCVGATYKVVL------DGGDVVVVKRIRERK---KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKD-ELFLV 405 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~------~~~~~vavK~l~~~~---~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~-~~~lV 405 (640)
..+.||+|+||.||+|+. .+++.||||.++... ..+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 357899999999999984 345789999997653 235678899999999 7899999999998754 59999
Q ss_pred EeccCCCCHHHhhccCCCCC-----------CCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCe
Q 006559 406 YDYLPHGSLHSLLHGSRGPG-----------RMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNA 474 (640)
Q Consensus 406 ~Ey~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~ 474 (640)
|||+++|+|.+++....... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~ 187 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 187 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCE
Confidence 99999999999998654210 12388999999999999999999954 59999999999999999999
Q ss_pred EEccCCcccccCCC--------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHH
Q 006559 475 CISDIGVHQLFHTP--------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVK 545 (640)
Q Consensus 475 kl~DfGl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~ 545 (640)
||+|||+++..... ..++..|+|||++ ....++.++|||||||++|||+| |+.||.........
T Consensus 188 kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~ 260 (316)
T 2xir_A 188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260 (316)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred EECCCccccccccCccceeccCCCcceeecCchhh-------ccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH
Confidence 99999999865321 2346689999965 34567789999999999999999 99999754322211
Q ss_pred HHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 546 WVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.......... ..... ...++.+++..||+.||++|||+.++++.|+++...
T Consensus 261 -~~~~~~~~~~--------~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 261 -CRRLKEGTRM--------RAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp -HHHHHHTCCC--------CCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHHhccCccC--------CCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 1111111000 00111 123467788889999999999999999999998753
No 158
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.6e-38 Score=334.23 Aligned_cols=233 Identities=19% Similarity=0.264 Sum_probs=177.9
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc-----chHHHHHHHHH-HhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-----KKREVDEWLRV-IGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..++||+|+||.||+|+.. ++..||||+++... ..+.+..|..+ ++.++||||+++++++...+..|+||||+
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 3578999999999999975 57889999997652 12334455554 57789999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC---
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH--- 486 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~--- 486 (640)
++|+|.+++.... .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 122 NGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999997543 478889999999999999999954 59999999999999999999999999997632
Q ss_pred ---CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 487 ---TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 487 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
....+|..|+|||++. ...++.++|||||||++|||++|+.||..... .+..+..... .
T Consensus 194 ~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~---------~ 255 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLH-------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNK---------P 255 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHT-------TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHHHHHHS---------C
T ss_pred CccccccCCccccCHHHhC-------CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhc---------c
Confidence 2345789999999753 34577899999999999999999999975432 1111111111 1
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIV 598 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v 598 (640)
......... .+.+++..||+.||++||++.+.
T Consensus 256 ~~~~~~~~~---~~~~li~~lL~~dp~~R~~~~~~ 287 (373)
T 2r5t_A 256 LQLKPNITN---SARHLLEGLLQKDRTKRLGAKDD 287 (373)
T ss_dssp CCCCSSSCH---HHHHHHHHHTCSSGGGSTTTTTT
T ss_pred cCCCCCCCH---HHHHHHHHHcccCHHhCCCCCCC
Confidence 111112222 45667778999999999998643
No 159
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=335.89 Aligned_cols=201 Identities=23% Similarity=0.401 Sum_probs=154.7
Q ss_pred ChHHHHHHhhccccccCcceEEEEEeC---CCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEc--CCeEE
Q 006559 329 NVGDLLKSSAELLGKGCVGATYKVVLD---GGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNG--KDELF 403 (640)
Q Consensus 329 ~~~~~~~~~~~~iG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~ 403 (640)
.+++.+.-..++||+|+||.||+|+.. ++..||||++........+.+|++++++++|||||++++++.. ....|
T Consensus 17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 344444334568999999999999965 4778999999877666778899999999999999999999954 67899
Q ss_pred EEEeccCCCCHHHhhccCC----CCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE----CCCCCeE
Q 006559 404 LVYDYLPHGSLHSLLHGSR----GPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV----DQLGNAC 475 (640)
Q Consensus 404 lV~Ey~~~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----~~~~~~k 475 (640)
+||||++ |+|.+++.... ......+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 9999997 58887775221 11122488999999999999999999954 59999999999999 7789999
Q ss_pred EccCCcccccCC---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 006559 476 ISDIGVHQLFHT---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539 (640)
Q Consensus 476 l~DfGl~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~ 539 (640)
|+|||+++.... ...+|..|+|||++.+ ...++.++|||||||++|||+||+.||...
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG------ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTT------CCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcC------CCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999999987542 2345889999997632 234778999999999999999999999743
No 160
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.5e-37 Score=314.49 Aligned_cols=248 Identities=19% Similarity=0.299 Sum_probs=194.9
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc--------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK--------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. +++.||||.++... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence 3568999999999999975 68899999986541 25678899999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC----CeEEccCCccc
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG----NACISDIGVHQ 483 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGl~~ 483 (640)
|+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++
T Consensus 89 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999997543 58999999999999999999995 4599999999999999877 89999999998
Q ss_pred ccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 484 LFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 484 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
.... ...++..|+|||++ ....++.++||||||+++|||+||+.||...... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~--- 228 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIV-------NYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTNISAVNY--- 228 (283)
T ss_dssp ECC--------CCCGGGCCHHHH-------TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCC---
T ss_pred eccCCCcccccCCCcCccCccee-------cCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHHhHhccc---
Confidence 7543 23468889999965 3345778999999999999999999999754321 11111111000
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhhccC
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIRTKG 609 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~~~~ 609 (640)
..+.. ........+.+++.+||+.||++||++.++++ .+++++...
T Consensus 229 ~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 229 DFDEE-----YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp CCCHH-----HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred CCcch-----hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 00100 01112235677888999999999999999986 677776553
No 161
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=8e-38 Score=340.73 Aligned_cols=180 Identities=22% Similarity=0.345 Sum_probs=143.5
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcC-----CeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGK-----DELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~ 406 (640)
..++||+|+||+||+|+.. +++.||||++... ...+.+.+|++++++++|||||++++++... ...|+||
T Consensus 57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 3578999999999999854 6889999998653 2345678899999999999999999999543 5799999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||+. |+|.+++.... .+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~~-~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eccc-cchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9985 79999987543 589999999999999999999954 59999999999999999999999999998753
Q ss_pred C---------------------------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh
Q 006559 487 T---------------------------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531 (640)
Q Consensus 487 ~---------------------------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t 531 (640)
. ...+|..|+|||++. ....++.++|||||||++|||+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL------LQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHT------TCCCCCTHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhh------CCCCCCcHhHHHHHHHHHHHHHH
Confidence 1 224588899999742 33457889999999999999999
No 162
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-37 Score=316.48 Aligned_cols=238 Identities=18% Similarity=0.246 Sum_probs=187.1
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|... ++..||+|++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 567999999999999864 58899999987542 2355778999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC---eEEccCCcccccCCC-
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN---ACISDIGVHQLFHTP- 488 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl~~~~~~~- 488 (640)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 91 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 91 ELFEDIVARE-----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9998887543 588999999999999999999954 5999999999999986655 999999998766432
Q ss_pred ----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 489 ----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 489 ----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
..++..|+|||++ ....++.++|||||||++|||++|+.||...... ........... ....+
T Consensus 163 ~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~--~~~~~-- 229 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVL-------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAY--DYPSP-- 229 (284)
T ss_dssp BCCCSCSCGGGCCHHHH-------TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC--CCCTT--
T ss_pred cccCCCCCcCCcCchhh-------cCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhccc--cCCch--
Confidence 3568899999975 3345678999999999999999999999754322 11111111100 00000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......++.+++..||+.||++|||+.|+++
T Consensus 230 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 230 ----EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00112234667788899999999999999976
No 163
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=320.04 Aligned_cols=241 Identities=22% Similarity=0.303 Sum_probs=186.6
Q ss_pred ccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 339 ELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
.+||+|+||.||+|+. .++..||||.+... ...+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4799999999999995 56788999998765 33567889999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC-CCCeEEccCCcccccCC------C
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ-LGNACISDIGVHQLFHT------P 488 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGl~~~~~~------~ 488 (640)
+++..... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++.... .
T Consensus 108 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 108 ALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99976532 2356788899999999999999995 45999999999999987 89999999999876542 2
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..++..|+|||++... ...++.++|||||||++|||+||+.||...........+..... ..+. .+.
T Consensus 183 ~~~~~~y~aPE~~~~~-----~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------~~~~--~~~ 249 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKG-----PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK------VHPE--IPE 249 (295)
T ss_dssp CCCCGGGCCHHHHHHG-----GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC------CCCC--CCT
T ss_pred cCCCccccChhhhcCC-----CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc------cccc--ccc
Confidence 3467899999975321 12367899999999999999999999964322111111110000 0001 111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.. ..++.+++.+||+.||++||++.++++
T Consensus 250 ~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 SM---SAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TS---CHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cC---CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11 234667788899999999999999864
No 164
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=331.03 Aligned_cols=252 Identities=26% Similarity=0.416 Sum_probs=192.8
Q ss_pred hhccccccCcceEEEEEe-----CCCcEEEEEEecccc--chHHHHHHHHHHhccCCCcccceeEEEEcCC--eEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVL-----DGGDVVVVKRIRERK--KKREVDEWLRVIGGLRHSNIVSIRAYCNGKD--ELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lV~E 407 (640)
..+.||+|+||.||++++ .+++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 357899999999999984 357889999997653 3457889999999999999999999987654 7899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999998653 258899999999999999999995 4599999999999999999999999999987643
Q ss_pred C---------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccc--
Q 006559 488 P---------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESA-- 556 (640)
Q Consensus 488 ~---------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 556 (640)
. ...+..|+|||++. ...++.++|||||||++|||+||+.|+.... ..+.+........
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~il~el~tg~~~~~~~~---~~~~~~~~~~~~~~~ 267 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLT-------ESKFSVASDVWSFGVVLYELFTYIEKSKSPP---AEFMRMIGNDKQGQM 267 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHH-------HCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH---HHHHHHHCTTCCTHH
T ss_pred cccccccccCCCCceeEECchhhc-------CCCCCchhhHHHHHHHHHHHHhcCCCCCCCH---HHHHHhhccccchhh
Confidence 2 22355799999653 3456789999999999999999999875321 1111111111000
Q ss_pred -----ccccch--hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 557 -----WEVFDF--ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 557 -----~~~~d~--~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
.+.+.. ...... ....++.+++..||+.||++|||+.++++.|++++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 268 IVFHLIELLKNNGRLPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHHHTTCCCCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhcCCCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 000000 000111 2234577788899999999999999999999998753
No 165
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=326.53 Aligned_cols=257 Identities=17% Similarity=0.317 Sum_probs=187.9
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccch---HHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKK---REVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||.||+|+.. +++.||||++...... ..+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 467999999999999965 6889999998754221 234568999999999999999999999999999999997 59
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------ 487 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------ 487 (640)
|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 86 LKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence 999887643 2588999999999999999999954 599999999999999999999999999876542
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHH-HHhhcc-ccccc-ccchh
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWV-QMMGQD-ESAWE-VFDFE 563 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~-~~~~~~-~~~~~-~~d~~ 563 (640)
...+|..|+|||++.+ ...++.++|||||||++|||+||+.||...... ....+ +..... ...+. .....
T Consensus 159 ~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLG------STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ----CGGGCCHHHHTT------CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cccCcccccChhhhcC------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence 2345889999997532 245678999999999999999999999754322 11111 111111 00010 00000
Q ss_pred ---------hccC---hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhhcc
Q 006559 564 ---------LIMD---KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIRTK 608 (640)
Q Consensus 564 ---------~~~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~~~ 608 (640)
.... ........++.+++.+||+.||++|||+.|+++ .+.++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 0000 000111235677888999999999999999976 55555443
No 166
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-37 Score=322.19 Aligned_cols=251 Identities=23% Similarity=0.354 Sum_probs=193.9
Q ss_pred hhccccccCcceEEEEEeC-CCcE--EEEEEeccc---cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDV--VVVKRIRER---KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~--vavK~l~~~---~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+|+.. ++.. ||||.++.. ...+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 3578999999999999864 4554 489988753 2345688899999999 8999999999999999999999999
Q ss_pred CCCCHHHhhccCCC-----------CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEcc
Q 006559 410 PHGSLHSLLHGSRG-----------PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISD 478 (640)
Q Consensus 410 ~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~D 478 (640)
++|+|.+++..... .....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kL~D 185 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIAD 185 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECC
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeEEEcc
Confidence 99999999976430 112358999999999999999999995 4599999999999999999999999
Q ss_pred CCcccccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhc
Q 006559 479 IGVHQLFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQ 552 (640)
Q Consensus 479 fGl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 552 (640)
||+++.... ....+..|+|||++ ....++.++|||||||++|||+| |+.||..... .........
T Consensus 186 fg~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~~~ 256 (327)
T 1fvr_A 186 FGLSRGQEVYVKKTMGRLPVRWMAIESL-------NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQ 256 (327)
T ss_dssp TTCEESSCEECCC----CCTTTCCHHHH-------HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHGGG
T ss_pred cCcCccccccccccCCCCCccccChhhh-------ccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--HHHHHHhhc
Confidence 999875431 22346789999965 33456789999999999999998 9999975432 222222211
Q ss_pred ccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 553 DESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 553 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
... ...... ...++.+++.+||+.||++|||+.++++.|+++..+..
T Consensus 257 ~~~--------~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 257 GYR--------LEKPLN---CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp TCC--------CCCCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCC--------CCCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 100 001111 12346678888999999999999999999999876543
No 167
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.1e-38 Score=325.31 Aligned_cols=240 Identities=18% Similarity=0.282 Sum_probs=186.9
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhccC-CCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGLR-HSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +++.||||++... .....+.+|+.++.+++ ||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 378999999999999965 5889999998754 23567888999999885 69999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC---CCCeEEccCCcccccCCC
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVHQLFHTP 488 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl~~~~~~~ 488 (640)
|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 114 ~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 114 GEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred CcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999986542 22589999999999999999999954 5999999999999997 789999999999876432
Q ss_pred -----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 489 -----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 489 -----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
..++..|+|||++ ....++.++|||||||++|||+||+.||........ ........ .+..
T Consensus 188 ~~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~~~-----~~~~ 253 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEIL-------NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--YLNISQVN-----VDYS 253 (327)
T ss_dssp ------CCCGGGCCHHHH-------TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHTC-----CCCC
T ss_pred cccccccCCcCccCCeee-------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHHHhcc-----cccC
Confidence 3568899999965 344677899999999999999999999975432211 11111100 0000
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. .........+.+++..||+.||++|||+.++++
T Consensus 254 ~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 254 E---ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp T---TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0 001112234667788899999999999999864
No 168
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.1e-37 Score=328.85 Aligned_cols=255 Identities=20% Similarity=0.275 Sum_probs=191.6
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||.||+|+.. ++..||+|.+... ...+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 467999999999999965 6889999998754 234567889999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC----CCc
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH----TPF 489 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~----~~~ 489 (640)
|.+++.... .+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++... ...
T Consensus 118 L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 118 LDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 999997643 488999999999999999999952 259999999999999999999999999986542 334
Q ss_pred cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccc---------------
Q 006559 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDE--------------- 554 (640)
Q Consensus 490 ~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~--------------- 554 (640)
.++..|+|||++ ....++.++|||||||++|||+||+.||..................
T Consensus 191 ~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 191 VGTRSYMSPERL-------QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp CCCCTTCCHHHH-------TTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred CCCCCeECHHHH-------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 568899999975 3345778999999999999999999999754432222111000000
Q ss_pred ------------ccccccchhhc---cChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 555 ------------SAWEVFDFELI---MDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 555 ------------~~~~~~d~~~~---~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
...+..+.... ..........++.+++..||+.||++|||+.|+++ .+++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 00000000000 00000011235778888999999999999999975 444443
No 169
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-37 Score=338.06 Aligned_cols=250 Identities=18% Similarity=0.223 Sum_probs=192.8
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhccCCC-cccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGLRHS-NIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~-niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
..++||+|+||.||+|+. .+++.||||++.......++..|+++++.++|+ +|..+..++...+..++||||+ +++|
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 356899999999999995 568899999987765666688899999999885 5555666667788999999999 9999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE---CCCCCeEEccCCcccccCC----
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV---DQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGl~~~~~~---- 487 (640)
.+++..... .+++..++.|+.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+++.+..
T Consensus 90 ~~ll~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCSR----KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 999975432 589999999999999999999954 59999999999999 6889999999999986542
Q ss_pred ---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHHHHhhcccccc
Q 006559 488 ---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWVQMMGQDESAW 557 (640)
Q Consensus 488 ---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~ 557 (640)
...+|..|+|||++ ....++.++|||||||++|||++|+.||...... ............ ..
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~-------~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-~~ 234 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTH-------LGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-VA 234 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHH-------TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH-HH
T ss_pred cccccccccccCCCccccCHHHh-------cCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc-cc
Confidence 23468899999965 3445778999999999999999999999753221 111111111100 00
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
... .........++.+++..||+.+|++||++.+|+++|+++...
T Consensus 235 ~~~------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 235 TSI------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp SCH------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccH------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 000 000012234677888889999999999999999999998543
No 170
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=318.54 Aligned_cols=249 Identities=21% Similarity=0.303 Sum_probs=183.5
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc-------chHHHHHHHHHHhcc---CCCcccceeEEEEcCC-----e
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK-------KKREVDEWLRVIGGL---RHSNIVSIRAYCNGKD-----E 401 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-------~~~~~~~e~~~l~~l---~H~niv~l~~~~~~~~-----~ 401 (640)
.+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++++++ +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 56799999999999995 568899999986431 134566677666655 5999999999998654 5
Q ss_pred EEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCc
Q 006559 402 LFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGV 481 (640)
Q Consensus 402 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 481 (640)
.++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 899999997 699999986542 2489999999999999999999954 499999999999999999999999999
Q ss_pred ccccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hH-HHHHHhhccc
Q 006559 482 HQLFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IV-KWVQMMGQDE 554 (640)
Q Consensus 482 ~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~-~~~~~~~~~~ 554 (640)
++.... ...+|..|+|||++ ....++.++|||||||++|||+||+.||...... .. ...+......
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVL-------LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHH-------HTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred ccccCCCcccCCccccccccCchHH-------cCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 986543 23458899999975 3345778999999999999999999999754322 11 1111111110
Q ss_pred -cccc----ccchhh----ccC--hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 555 -SAWE----VFDFEL----IMD--KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 555 -~~~~----~~d~~~----~~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+. ..+... ... ....+....+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 000000 000 000112245677888899999999999999875
No 171
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=324.02 Aligned_cols=251 Identities=18% Similarity=0.281 Sum_probs=179.2
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc--cchHHHHHHHHHHhccC-CCcccceeEEEE--------cCCeEEE
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER--KKKREVDEWLRVIGGLR-HSNIVSIRAYCN--------GKDELFL 404 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~-H~niv~l~~~~~--------~~~~~~l 404 (640)
..++||+|+||.||+|+. .+++.||||++... ...+.+.+|+.++.++. ||||+++++++. .....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 467899999999999996 46889999988654 33456788999999996 999999999994 3446899
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 405 VYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 405 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
||||+. |+|.+++..... ..++++..+..++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 112 v~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 999996 799998864221 125899999999999999999999532 3399999999999999999999999999987
Q ss_pred cCC------------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHH
Q 006559 485 FHT------------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKW 546 (640)
Q Consensus 485 ~~~------------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~ 546 (640)
... ...++..|+|||++.. .....++.++|||||||++|||+||+.||...... ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~ 261 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDL----YSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--RI 261 (337)
T ss_dssp CSSCC-------------------------------C----CTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhc----cccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--Hh
Confidence 543 1235778999997521 13456788999999999999999999999743211 11
Q ss_pred HHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCC
Q 006559 547 VQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGSI 611 (640)
Q Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~~ 611 (640)
...... ..... .....+.+++..||+.||++||++.|+++.|+++......
T Consensus 262 ~~~~~~-------~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 262 VNGKYS-------IPPHD-------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ----CC-------CCTTC-------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred hcCccc-------CCccc-------ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 100000 00000 0112356678889999999999999999999999866444
No 172
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.1e-38 Score=325.46 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=186.2
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 568999999999999965 48899999986542 2345678999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (331)
T 4aaa_A 110 ILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 181 (331)
T ss_dssp HHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred hHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcccc
Confidence 9998876443 488999999999999999999954 599999999999999999999999999976532
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-H-HHHHHhhcc-----------
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI-V-KWVQMMGQD----------- 553 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~-~-~~~~~~~~~----------- 553 (640)
...++..|+|||++.. ...++.++|||||||++|||+||+.||....... . .........
T Consensus 182 ~~~~~t~~y~aPE~~~~------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 182 DDEVATRWYRAPELLVG------DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --CCCCCTTCCHHHHTT------CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred CCCcCCccccCcccccC------CCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 2356888999997532 2356789999999999999999999997543211 1 111111100
Q ss_pred cccccccchhhccC----hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 554 ESAWEVFDFELIMD----KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 554 ~~~~~~~d~~~~~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
........+..... .........+.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000000000 001122346778888999999999999999874
No 173
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-38 Score=330.18 Aligned_cols=239 Identities=20% Similarity=0.274 Sum_probs=185.9
Q ss_pred hhccccccCcceEEEEEe----CCCcEEEEEEeccc------cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEE
Q 006559 337 SAELLGKGCVGATYKVVL----DGGDVVVVKRIRER------KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLV 405 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~----~~~~~vavK~l~~~------~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV 405 (640)
..+.||+|+||.||+++. .+++.||||+++.. ...+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 137 (355)
T 1vzo_A 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI 137 (355)
T ss_dssp EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEE
T ss_pred EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEE
Confidence 357899999999999997 46889999998753 2234566788889988 699999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCccccc
Q 006559 406 YDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485 (640)
Q Consensus 406 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~ 485 (640)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 138 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 138 LDYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp ECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999997543 588999999999999999999954 5999999999999999999999999998765
Q ss_pred CC-------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhccccc
Q 006559 486 HT-------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQDESA 556 (640)
Q Consensus 486 ~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~ 556 (640)
.. ...+|..|+|||++.+. ...++.++|||||||++|||+||+.||..... ....+.+......
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-- 282 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGG-----DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-- 282 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTC-----C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC--
T ss_pred ccCCCCcccCcccCcCccChhhhcCC-----CCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC--
Confidence 32 23568899999976321 23467899999999999999999999974321 2222222211110
Q ss_pred ccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006559 557 WEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRP-----NMSIVHR 600 (640)
Q Consensus 557 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~~v~~ 600 (640)
...+... ...+.+++.+||+.||++|| ++.|+++
T Consensus 283 -------~~~~~~~---~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 283 -------PPYPQEM---SALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp -------CCCCTTS---CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -------CCCCccc---CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 0011111 23456778889999999999 8888765
No 174
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.3e-37 Score=325.60 Aligned_cols=244 Identities=17% Similarity=0.273 Sum_probs=189.8
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc----------chHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEE
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----------KKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLV 405 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----------~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV 405 (640)
.+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|+.+++++ +||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 368999999999999975 68999999986542 134567889999998 799999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCccccc
Q 006559 406 YDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485 (640)
Q Consensus 406 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~ 485 (640)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 179 ~e~~~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp ECCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999997542 588999999999999999999954 5999999999999999999999999998765
Q ss_pred CC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccccc
Q 006559 486 HT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVF 560 (640)
Q Consensus 486 ~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (640)
.. ...+|..|+|||++.+.... ....++.++|||||||++|||+||+.||...... ...+....... ...
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~--~~~ 325 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDE-THPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMIMEGQY--QFS 325 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCT-TSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC--CCC
T ss_pred CCCcccccCCCCCCccChhhccccccc-cCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCC--CCC
Confidence 43 23568899999976432111 1235788999999999999999999999753321 11111111100 000
Q ss_pred chhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 561 DFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 561 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.+ ........+.+++.+||+.||++|||+.++++
T Consensus 326 ~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 326 SP------EWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH------HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred Cc------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 01112235677888899999999999999875
No 175
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=319.33 Aligned_cols=239 Identities=19% Similarity=0.313 Sum_probs=187.1
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..+.||+|+||.||+|+.. +|..||||.+......+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred hheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 3567999999999999975 588999999987766778899999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------Cc
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------PF 489 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------~~ 489 (640)
+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..... ..
T Consensus 113 ~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (314)
T 3com_A 113 DIIRLRN----KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 185 (314)
T ss_dssp HHHHHHT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCC
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCcc
Confidence 9986322 2588999999999999999999954 599999999999999999999999999876543 23
Q ss_pred cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccChH
Q 006559 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKE 569 (640)
Q Consensus 490 ~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 569 (640)
.++..|+|||++ ....++.++|||||||++|||++|+.||.........+ ....... +.......
T Consensus 186 ~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~------~~~~~~~~ 250 (314)
T 3com_A 186 IGTPFWMAPEVI-------QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF--MIPTNPP------PTFRKPEL 250 (314)
T ss_dssp CSCGGGCCHHHH-------SSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHHSCC------CCCSSGGG
T ss_pred CCCCCccChhhc-------CCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHhcCCC------cccCCccc
Confidence 457889999975 33457789999999999999999999997533211111 1111100 00000111
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 570 MEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 570 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
....+.+++..||+.||++|||+.++++
T Consensus 251 ---~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 251 ---WSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---SCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1234667888899999999999999975
No 176
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.3e-37 Score=321.88 Aligned_cols=249 Identities=23% Similarity=0.297 Sum_probs=191.1
Q ss_pred hhccccccCcceEEEEEe------CCCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVL------DGGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~------~~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+. .++..||||.+... .....+.+|+.++++++||||+++++++...+..|+|||
T Consensus 34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence 357899999999999984 34678999999754 234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCC--CCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC---CCCeEEccCCcc
Q 006559 408 YLPHGSLHSLLHGSRGP--GRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVH 482 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl~ 482 (640)
|+++|+|.+++...... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999865321 123588999999999999999999954 5999999999999994 456999999998
Q ss_pred cccCC--------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcc
Q 006559 483 QLFHT--------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQD 553 (640)
Q Consensus 483 ~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 553 (640)
+.... ...++..|+|||++ ....++.++|||||||++|||+| |+.||...... .........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~ 261 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAF-------MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSG 261 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTT
T ss_pred cccccccccccCCCcCCCcceeCHhHh-------cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcC
Confidence 75421 12346789999965 33457789999999999999999 99999754321 112111111
Q ss_pred cccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 554 ESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 554 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
... + .... ....+.+++..||+.||++||++.++++.|+.+...
T Consensus 262 ~~~----~----~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 262 GRM----D----PPKN---CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CCC----C----CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC----C----CCCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 100 0 0111 123466788889999999999999999999998764
No 177
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.6e-37 Score=334.33 Aligned_cols=244 Identities=19% Similarity=0.284 Sum_probs=180.1
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcC------CeEEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGK------DELFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lV~ 406 (640)
.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+++++.++|||||++++++... ...|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 56899999999999985 45888999999754 2345677899999999999999999999654 4689999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
|||++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 147 E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 147 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp ECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred eCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 99986 46666643 378899999999999999999954 59999999999999999999999999998764
Q ss_pred C-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHH---HHhhccc-ccc
Q 006559 487 T-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWV---QMMGQDE-SAW 557 (640)
Q Consensus 487 ~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~---~~~~~~~-~~~ 557 (640)
. ...+|..|+|||++. ...++.++||||+||++|||++|+.||.+... ...+. +..+... ..+
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVIL-------GMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp -CCCC----CCCTTCCHHHHT-------TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHH
T ss_pred CCcccCCCcccccccCHHHHc-------CCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHH
Confidence 3 345688999999753 34577899999999999999999999975432 11111 1111100 000
Q ss_pred c-----------------------ccchh-hccC-hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 558 E-----------------------VFDFE-LIMD-KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 558 ~-----------------------~~d~~-~~~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. .+... .... ........++.+++.+||..||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000 0000 111122456788899999999999999999874
No 178
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.9e-38 Score=325.27 Aligned_cols=249 Identities=19% Similarity=0.296 Sum_probs=181.9
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccc----hHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKK----KREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
..+.||+|+||.||+|+. .+++.||||+++.... .+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 116 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE- 116 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-
Confidence 357899999999999985 4688999999975422 3456789999999999999999999999999999999998
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE-----CCCCCeEEccCCcccccC
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV-----DQLGNACISDIGVHQLFH 486 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-----~~~~~~kl~DfGl~~~~~ 486 (640)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 117 ~~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 117 NDLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 59999997653 488999999999999999999954 59999999999999 455569999999997654
Q ss_pred C------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch--HHHHHHhhccc-ccc
Q 006559 487 T------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI--VKWVQMMGQDE-SAW 557 (640)
Q Consensus 487 ~------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~--~~~~~~~~~~~-~~~ 557 (640)
. ...+|..|+|||++.. ...++.++|||||||++|||++|+.||....... ....+...... ..+
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLG------SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp -----------CCTTCCHHHHTT------CCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred CcccccCCCcCCccccCHHHhcC------CCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence 2 2345889999997532 2346789999999999999999999997543211 11111111110 000
Q ss_pred cccc----h--hh--ccChHHHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 558 EVFD----F--EL--IMDKEMEE-----EMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 558 ~~~d----~--~~--~~~~~~~~-----~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.... . .. ........ ...++.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 0 00 00000000 1245678888999999999999999875
No 179
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.6e-38 Score=319.81 Aligned_cols=240 Identities=23% Similarity=0.358 Sum_probs=190.2
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEc----------------C
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNG----------------K 399 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----------------~ 399 (640)
..+.||+|+||.||+|+.. +++.||+|.+.... ..+.+|++++++++||||+++++++.. .
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (284)
T 2a19_B 15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92 (284)
T ss_dssp EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEE
T ss_pred eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCc
Confidence 3578999999999999975 78999999987543 356788999999999999999998854 3
Q ss_pred CeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccC
Q 006559 400 DELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDI 479 (640)
Q Consensus 400 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 479 (640)
...++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 93 KCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp EEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred ceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECcc
Confidence 45899999999999999997542 12588999999999999999999954 5999999999999999999999999
Q ss_pred CcccccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccc
Q 006559 480 GVHQLFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDE 554 (640)
Q Consensus 480 Gl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 554 (640)
|+++.... ...++..|+|||++ ....++.++|||||||++|||+||..|+... ..+.......
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~- 234 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQI-------SSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRDG- 234 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHH-------HCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHTT-
T ss_pred hhheeccccccccccCCcccccChhhh-------ccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhcc-
Confidence 99877643 23468899999965 3445778999999999999999999887421 1111111110
Q ss_pred ccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 555 SAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 555 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
. .....+ .++.+++..||+.||++||++.|+++.|+.+....
T Consensus 235 ~----------~~~~~~---~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 235 I----------ISDIFD---KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp C----------CCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred c----------ccccCC---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 0 001111 23566778899999999999999999999988653
No 180
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-37 Score=324.84 Aligned_cols=253 Identities=18% Similarity=0.261 Sum_probs=189.3
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc---chHHHHHHHH-HHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK---KKREVDEWLR-VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+. .+|+.||||+++... ...++..|.. .++.++||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 56799999999999996 578899999997642 2233444444 47889999999999999999999999999975
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---- 488 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---- 488 (640)
+|.+++..... ....+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 99888763210 112589999999999999999999953 25999999999999999999999999998776432
Q ss_pred -ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 489 -FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 489 -~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
..+|..|+|||++... .....++.++|||||||++|||+||+.||...........+...... . ... .
T Consensus 212 ~~~gt~~y~aPE~~~~~---~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~------~~~-~ 280 (340)
T 3an0_A 212 IDAGCKPYMAPERINPE---LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS-P------QLP-A 280 (340)
T ss_dssp HSSCCCCCCCHHHHSCC---TTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC-C------CCC-G
T ss_pred cCCCCccccCccccccc---cccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC-C------CCC-c
Confidence 3568899999975321 22345788999999999999999999999753322222222111110 0 000 0
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhhcc
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIRTK 608 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~~~ 608 (640)
. ....++.+++.+||+.||++||++.|+++ .+.....+
T Consensus 281 ~---~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 320 (340)
T 3an0_A 281 D---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK 320 (340)
T ss_dssp G---GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTTS
T ss_pred c---cCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccccc
Confidence 1 11234677888899999999999999976 55444433
No 181
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6.1e-37 Score=315.18 Aligned_cols=239 Identities=17% Similarity=0.269 Sum_probs=187.6
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc--chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK--KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
..+.||+|+||.||+++.. +|+.||+|.++... ..+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 3578999999999999964 68899999997652 34568899999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE---CCCCCeEEccCCcccccCCC--
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV---DQLGNACISDIGVHQLFHTP-- 488 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGl~~~~~~~-- 488 (640)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILERG-----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 999987543 588999999999999999999954 59999999999999 78899999999998765432
Q ss_pred --ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 489 --FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 489 --~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
..++..|+|||++ ....++.++|||||||++|||+||+.||...... ............ .... .
T Consensus 165 ~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~---~~~~--~ 230 (304)
T 2jam_A 165 STACGTPGYVAPEVL-------AQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYYE---FESP--F 230 (304)
T ss_dssp HHHHSCCCBCCTTTB-------SSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCCC---CCTT--T
T ss_pred ccccCCCCccChHHh-------ccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCC---CCcc--c
Confidence 2358899999965 3345778999999999999999999999753321 111111111000 0000 0
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.. .....+.+++..||+.||++||++.++++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 WD---DISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TT---TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cc---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01 12234667888899999999999999875
No 182
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.7e-37 Score=320.69 Aligned_cols=249 Identities=19% Similarity=0.331 Sum_probs=185.4
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEc--------CCeEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNG--------KDELFL 404 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------~~~~~l 404 (640)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+|++++++++||||+++++++.. .+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 56899999999999997 568899999986542 24567889999999999999999999976 346899
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 405 VYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 405 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 102 v~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 9999985 7877776543 2588999999999999999999954 599999999999999999999999999876
Q ss_pred cCC----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHHHHHHh-hc
Q 006559 485 FHT----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVKWVQMM-GQ 552 (640)
Q Consensus 485 ~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~~~~~~-~~ 552 (640)
+.. ...+|..|+|||++.+ ...++.++|||||||++|||+||+.||...... ....+... ..
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 247 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLG------ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 247 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTT------CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred ccccccccccccCCcccccCccCchhhcC------CCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 531 2345888999997532 244678999999999999999999999854322 11111111 11
Q ss_pred c-cccccccch-hh--------ccChHHHHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 553 D-ESAWEVFDF-EL--------IMDKEMEEE------MRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 553 ~-~~~~~~~d~-~~--------~~~~~~~~~------~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. ...+...+. .. .......+. ...+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0 000100000 00 000001111 234778899999999999999999876
No 183
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.1e-37 Score=314.95 Aligned_cols=235 Identities=20% Similarity=0.361 Sum_probs=188.7
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.||+|+||.||+|+. .+++.||||.+... ...+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 56799999999999985 46889999998754 234678899999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT------ 487 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~------ 487 (640)
|.+++... ++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 107 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 177 (303)
T 3a7i_A 107 ALDLLEPG------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177 (303)
T ss_dssp HHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBC
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccccC
Confidence 99999643 488999999999999999999954 599999999999999999999999999876543
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...++..|+|||++ ....++.++|||||||++|||+||+.||...... ........... +. ..
T Consensus 178 ~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~------~~--~~ 240 (303)
T 3a7i_A 178 TFVGTPFWMAPEVI-------KQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNP------PT--LE 240 (303)
T ss_dssp CCCSCGGGCCHHHH-------TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCC------CC--CC
T ss_pred ccCCCcCccCHHHH-------hcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCC------CC--Cc
Confidence 23457889999975 3345678999999999999999999999753221 11111111100 00 01
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRM 601 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~ 601 (640)
... ...+.+++..||+.||++|||+.++++.
T Consensus 241 ~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 241 GNY---SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp SSC---CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ccc---CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111 2346677888999999999999999763
No 184
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.8e-37 Score=320.37 Aligned_cols=245 Identities=16% Similarity=0.261 Sum_probs=186.2
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhccC-CCcccceeEEEEc--CCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGLR-HSNIVSIRAYCNG--KDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+. .+++.||||.++.. ..+.+.+|++++++++ ||||+++++++.. ....++||||++++
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc-chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 357899999999999985 56889999998743 4567889999999997 9999999999987 56799999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC-CeEEccCCcccccCC----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG-NACISDIGVHQLFHT---- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGl~~~~~~---- 487 (640)
+|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 119 ~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 9999985 367889999999999999999954 599999999999999776 899999999986543
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHH---HHhhccccccccc---
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWV---QMMGQDESAWEVF--- 560 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~---~~~~~~~~~~~~~--- 560 (640)
...++..|+|||++. ....++.++|||||||++|||+||+.||........... +..... ......
T Consensus 188 ~~~~~~~~y~aPE~~~------~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~ 260 (330)
T 3nsz_A 188 NVRVASRYFKGPELLV------DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE-DLYDYIDKY 260 (330)
T ss_dssp CSCCSCGGGCCHHHHT------TCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHH-HHHHHHHHT
T ss_pred ccccccccccChhhhc------CCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCc-hhhhHHHHh
Confidence 234578899999752 224577899999999999999999999964332221111 111100 000000
Q ss_pred ----chh---------------hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 561 ----DFE---------------LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 561 ----d~~---------------~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
++. ............++.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 0000000112345778888999999999999999975
No 185
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.6e-37 Score=324.76 Aligned_cols=238 Identities=18% Similarity=0.263 Sum_probs=182.3
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
.+.||+|+||.||+|+.. +++.||||.+..... ...+|++++.++ +||||+++++++.+.+..|+||||+++|+|.
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 104 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL 104 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence 568999999999999965 578899999975522 234567777776 7999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC----CCeEEccCCcccccCC----
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL----GNACISDIGVHQLFHT---- 487 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~----~~~kl~DfGl~~~~~~---- 487 (640)
+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+.++ +.+||+|||+++....
T Consensus 105 ~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 176 (342)
T 2qr7_A 105 DKILRQK-----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176 (342)
T ss_dssp HHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred HHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence 9997543 589999999999999999999954 59999999999998533 3599999999986532
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHHHHHHhhcccccccccchhh
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++. ...++.++|||||||++|||++|+.||..... ...+........... . ...
T Consensus 177 ~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~--~-~~~- 245 (342)
T 2qr7_A 177 LMTPCYTANFVAPEVLE-------RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS--L-SGG- 245 (342)
T ss_dssp BCCSSCCSSCCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC--C-CST-
T ss_pred eeccCCCccccCHHHhc-------CCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc--c-Ccc-
Confidence 234588999999753 33467899999999999999999999975322 222222222211100 0 000
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..... ..++.+++..||+.||++||++.++++
T Consensus 246 -~~~~~---s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 246 -YWNSV---SDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -TTTTS---CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -ccccC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00112 234566778899999999999999865
No 186
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.8e-37 Score=321.36 Aligned_cols=235 Identities=18% Similarity=0.275 Sum_probs=188.1
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+++.. +++.||+|.+... ...+.+.+|+.++++++||||+++++++...+..|+||||++
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCC
Confidence 3578999999999999965 4788999998654 234567889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 125 ~~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 125 RRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp TCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 999999987543 588999999999999999999954 599999999999999999999999999976532
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...++..|+|||++ ....++.++|||||||++|||+||+.||...... .......... .
T Consensus 197 ~~~~~~gt~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~---------~ 258 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVL-------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKKNE---------Y 258 (335)
T ss_dssp CBCCCCSCCSSCCHHHH-------HTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTC---------C
T ss_pred cccccCCCccccCHHHh-------ccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHhcCC---------C
Confidence 23457889999975 3345678999999999999999999999754321 1111111110 0
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
....... ..+.+++.+||+.||++||++.|+++
T Consensus 259 ~~~~~~~---~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 259 SIPKHIN---PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CCCTTSC---HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCCccCC---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111111 24566788899999999999999976
No 187
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.8e-37 Score=335.82 Aligned_cols=237 Identities=19% Similarity=0.272 Sum_probs=188.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.++||+|+||+||+|+.. +++.||||++... .....+.+|++++++++||||+++++++......|+||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 578999999999999965 6889999998643 34567889999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC---CCCCeEEccCCcccccCC--
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD---QLGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGl~~~~~~-- 487 (640)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 107 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 9999887543 588999999999999999999954 599999999999995 456899999999986643
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|+.|+|||++. ..++.++||||+||++|||++|+.||..... ....+......... + .
T Consensus 179 ~~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~---~--~ 243 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLR--------GTYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVETGKYAF---D--L 243 (486)
T ss_dssp ---CCTTGGGGCCGGGGG--------SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCS---C--S
T ss_pred ccCCCcCCCCCCCHHHhC--------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCCC---C--C
Confidence 245688999999753 2477899999999999999999999975432 11122211111000 0 0
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+.......++.+++..||+.||++|||+.++++
T Consensus 244 ---~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 244 ---PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp ---GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011112234667788899999999999999986
No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.1e-37 Score=337.44 Aligned_cols=243 Identities=20% Similarity=0.286 Sum_probs=187.5
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
..+.||+|+||.||+|+.. ++..||||++... .....+.+|+++++.++|||||+++++|......|+||||+++
T Consensus 41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 3578999999999999965 6788999998754 2356788999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC---CCCeEEccCCcccccCC-
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVHQLFHT- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl~~~~~~- 487 (640)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 121 g~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999887543 588999999999999999999954 5999999999999976 45599999999987643
Q ss_pred ----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchh
Q 006559 488 ----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 ----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 563 (640)
...+|..|+|||++. ..++.++||||+||++|||++|+.||...... ...+........ ++.
T Consensus 193 ~~~~~~~gt~~y~aPE~l~--------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~---~~~- 258 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR--------KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGKYT---FDS- 258 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT--------TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC---CCS-
T ss_pred ccccccCCCcCeeCHHHHc--------ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC---CCc-
Confidence 235688999999752 35778999999999999999999999754322 222221111100 000
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHh
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDI 605 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i 605 (640)
+........+.+++..||+.||++|||+.++++ .+.+.
T Consensus 259 ----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 259 ----PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp ----GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred ----hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 011112234667788899999999999999974 35444
No 189
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.6e-37 Score=318.98 Aligned_cols=250 Identities=24% Similarity=0.333 Sum_probs=174.0
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+. .+++.||||.+... ...+++.+|++++++++||||+++++++...+..++||||+++|
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 357899999999999985 46889999998654 23456778899999999999999999999999999999999999
Q ss_pred CHHHhhccC---CCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC--
Q 006559 413 SLHSLLHGS---RGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 413 sL~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-- 487 (640)
+|.+++... .......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 999998631 111123589999999999999999999954 599999999999999999999999999876532
Q ss_pred ---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccc-
Q 006559 488 ---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAW- 557 (640)
Q Consensus 488 ---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 557 (640)
...++..|+|||++. ....++.++|||||||++|||+||+.||.....................
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVME------QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249 (303)
T ss_dssp ------------CCCTTCCHHHHH------HHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred CccchhhhcccCCCccccCHHHhc------cccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence 234578899999752 1235678999999999999999999999754322111111111100000
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
...+.... . ....++.+++.+||+.||++||++.++++
T Consensus 250 ~~~~~~~~--~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 250 GVQDKEML--K---KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----CCC--C---CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhh--h---hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00011110 1 11234667888899999999999999975
No 190
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.9e-37 Score=314.34 Aligned_cols=234 Identities=18% Similarity=0.258 Sum_probs=188.3
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. ++..||||.+... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 568999999999999965 5778999998643 2245688999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 99 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (284)
T 2vgo_A 99 GELYKELQKHG-----RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR 170 (284)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccccc
Confidence 99999997543 48899999999999999999994 5699999999999999999999999999876543
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...++..|+|||++. ...++.++||||||+++|||++|+.||...... ...+..... ....+
T Consensus 171 ~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~---------~~~~~ 232 (284)
T 2vgo_A 171 TMCGTLDYLPPEMIE-------GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRIVNV---------DLKFP 232 (284)
T ss_dssp CCCSCGGGCCHHHHT-------TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTT---------CCCCC
T ss_pred cccCCCCcCCHHHhc-------cCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHHhcc---------ccCCC
Confidence 235688999999753 345678999999999999999999999754321 111111110 01111
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
...+ .++.+++..|++.||++||++.++++
T Consensus 233 ~~~~---~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 233 PFLS---DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp TTSC---HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CcCC---HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1122 24567788899999999999999975
No 191
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.9e-38 Score=318.48 Aligned_cols=251 Identities=18% Similarity=0.255 Sum_probs=179.9
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccccc----hHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERKK----KREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+. .+++.||||+++.... .+.+.++...++.++||||+++++++...+..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 56899999999999996 5788999999976522 2234445556888999999999999999999999999997 5
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---- 488 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---- 488 (640)
+|.+++..... ....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 91 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 88877653211 112589999999999999999999963 25999999999999999999999999998765432
Q ss_pred -ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 489 -FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 489 -~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
..++..|+|||++... .....++.++|||||||++|||+||+.||...........+....... .. ..
T Consensus 168 ~~~~t~~y~aPE~~~~~---~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~-~~ 236 (290)
T 3fme_A 168 IDAGCKPYMAPERINPE---LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP-------QL-PA 236 (290)
T ss_dssp --CCCCCCSCHHHHSCC---TTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC-------CC-CT
T ss_pred ccCCCccccChhhcChh---hcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC-------Cc-cc
Confidence 3468899999975211 234557789999999999999999999997543333222222221110 00 00
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
. ....++.+++.+||+.||++|||+.|+++ .+....
T Consensus 237 ~---~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 237 D---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred c---cCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 1 11234677888899999999999999976 554443
No 192
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.4e-37 Score=310.20 Aligned_cols=235 Identities=19% Similarity=0.294 Sum_probs=182.8
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +++.||||.+... ...+.+.+|++.++.++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 567999999999999975 6889999998654 2245678899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC---
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP--- 488 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~--- 488 (640)
++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 167 (276)
T 2h6d_A 96 GELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167 (276)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred CcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcce
Confidence 99999997543 478999999999999999999954 5999999999999999999999999998876432
Q ss_pred --ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhcc
Q 006559 489 --FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIM 566 (640)
Q Consensus 489 --~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 566 (640)
..++..|+|||++... ...+.++||||||+++|||++|+.||..... ....+...... ...
T Consensus 168 ~~~~~~~~y~aPE~~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~---------~~~ 230 (276)
T 2h6d_A 168 RTSCGSPNYAAPEVISGR------LYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGGV---------FYI 230 (276)
T ss_dssp ---------CCTGGGTTS------CCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC---------CCC
T ss_pred ecccCCccccCHHHHcCC------CCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcCc---------ccC
Confidence 3457889999975322 1235789999999999999999999975432 11111111110 001
Q ss_pred ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 567 DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 567 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+... ...+.+++.+||+.||++|||+.++++
T Consensus 231 ~~~~---~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 231 PEYL---NRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhc---CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1111 234667788899999999999999976
No 193
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.5e-37 Score=319.68 Aligned_cols=240 Identities=20% Similarity=0.281 Sum_probs=184.3
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc----------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEE
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLV 405 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 405 (640)
..+.||+|+||.||+|+.. +++.||||.+.... ....+.+|++++++++||||+++++++...+ .|+|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEE
Confidence 3578999999999999964 57889999986431 1234778999999999999999999997655 8999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC---eEEccCCcc
Q 006559 406 YDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN---ACISDIGVH 482 (640)
Q Consensus 406 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl~ 482 (640)
|||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 99999999999987543 588999999999999999999954 5999999999999987654 999999999
Q ss_pred cccCCC-----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhcccc
Q 006559 483 QLFHTP-----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQDES 555 (640)
Q Consensus 483 ~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~ 555 (640)
+..... ..++..|+|||++.. .....++.++|||||||++|||+||+.||..... .....+.....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--- 237 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVS----VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY--- 237 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHH----TTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC---
T ss_pred eecccccccccccCCcCccCchhhcc----CCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc---
Confidence 876543 245889999997521 1234577899999999999999999999975322 22221111000
Q ss_pred cccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 556 AWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 556 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. ..+. .......++.+++.+||+.||++||++.++++
T Consensus 238 --~-~~~~-----~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 --N-FIPE-----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --C-CCHH-----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --c-cCch-----hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 0000 01122345777888999999999999999873
No 194
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.8e-37 Score=316.06 Aligned_cols=235 Identities=18% Similarity=0.275 Sum_probs=188.0
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+++.. +++.||+|.+... ...+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCC
Confidence 3578999999999999975 5788999998654 224567789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 ~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999987543 588999999999999999999954 599999999999999999999999999876532
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...++..|+|||++ ....++.++||||||+++|||+||+.||...... .......... .
T Consensus 171 ~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~---------~ 232 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVL-------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKKNE---------Y 232 (294)
T ss_dssp CBCCCCSCCSSCCHHHH-------TTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTC---------C
T ss_pred ccccccCCCCcCCcchh-------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhhcc---------C
Confidence 23457889999975 3345678999999999999999999999754321 1111111110 0
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+.... ..+.+++.+||+.||++|||+.++++
T Consensus 233 ~~~~~~~---~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 233 SIPKHIN---PVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CCCTTSC---HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCccccC---HHHHHHHHHHcccChhhCcCHHHHhh
Confidence 0111112 24566788899999999999999976
No 195
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.5e-37 Score=339.82 Aligned_cols=238 Identities=18% Similarity=0.220 Sum_probs=188.7
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.++||+|+||.||+|+.. +|+.||||++... .....+.+|++++++++|||||++++++.+.+..|+||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 467999999999999974 6899999999653 2345577899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC----
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT---- 487 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~---- 487 (640)
|+|.+++.... ...+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++....
T Consensus 269 g~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~ 342 (576)
T 2acx_A 269 GDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342 (576)
T ss_dssp CBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred CcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence 99999997543 22489999999999999999999954 599999999999999999999999999987643
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc--hHHHHHHhhcccccccccchhh
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG--IVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++. ...++.++|||||||++|||+||+.||...... .....+..... ..
T Consensus 343 ~~~~GT~~Y~APEvl~-------~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~---------~~ 406 (576)
T 2acx_A 343 KGRVGTVGYMAPEVVK-------NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---------PE 406 (576)
T ss_dssp ECCCSCGGGCCHHHHT-------TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC---------CC
T ss_pred cccCCCccccCHHHHc-------CCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc---------cc
Confidence 245689999999753 345678999999999999999999999753221 11111111111 00
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRP-----NMSIVHR 600 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~~v~~ 600 (640)
......+ .++.+++..||+.||++|| ++.||.+
T Consensus 407 ~~p~~~s---~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 EYSERFS---PQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCTTSC---HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cCCccCC---HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0111122 3466677889999999999 6677753
No 196
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.7e-37 Score=333.24 Aligned_cols=189 Identities=23% Similarity=0.338 Sum_probs=159.7
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc-chHHHHHHHHHHhcc------CCCcccceeEEEEcCCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-KKREVDEWLRVIGGL------RHSNIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~~~~lV~Ey 408 (640)
..++||+|+||.||+|+.. +++.||||+++... ..+++.+|+++++.+ +|+||+++++++...+..++||||
T Consensus 101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 3578999999999999864 57899999997653 345666777777665 677999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC--eEEccCCcccccC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN--ACISDIGVHQLFH 486 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~--~kl~DfGl~~~~~ 486 (640)
+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 181 ~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 181 LS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp CC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred cC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 96 699999876532 2489999999999999999999954 5999999999999999887 9999999997654
Q ss_pred C---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 006559 487 T---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539 (640)
Q Consensus 487 ~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~ 539 (640)
. ...+|..|+|||++. ...++.++|||||||++|||+||+.||...
T Consensus 254 ~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVIL-------GARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHH-------TBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcccccCCCCCccChHHHh-------CCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 3 345688999999753 345788999999999999999999999754
No 197
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.7e-37 Score=337.07 Aligned_cols=244 Identities=20% Similarity=0.309 Sum_probs=192.6
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..++||+|+||.||+|+.. +++.||||++... ...+.+.+|++++++++||||+++++++...+..|+||||++
T Consensus 30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 3578999999999999965 6889999998643 335678899999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE---CCCCCeEEccCCcccccCC
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV---DQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGl~~~~~~ 487 (640)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 110 ~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999987543 589999999999999999999954 59999999999999 4678999999999987654
Q ss_pred C-----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccch
Q 006559 488 P-----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 488 ~-----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 562 (640)
. ..+|..|+|||++. ..++.++||||+||++|||++|+.||...... ...+.........
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~----- 246 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLH--------GTYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYTF----- 246 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHH--------TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC-----
T ss_pred ccccccCCCCccccCceeec--------CCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCCC-----
Confidence 2 34688999999752 24778999999999999999999999754321 1122211111000
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
.. +........+.+++.+||+.||++|||+.++++ .++...
T Consensus 247 ~~---~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 247 EL---PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp CS---GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred CC---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 00 011112234667788899999999999999975 555443
No 198
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.9e-37 Score=333.43 Aligned_cols=185 Identities=19% Similarity=0.324 Sum_probs=156.2
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcC-----CeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGK-----DELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~ 406 (640)
..+.||+|+||.||+|+.. +++.||||++... ...+.+.+|++++++++||||+++++++... ...|+||
T Consensus 30 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 3578999999999999964 5788999999754 2345678899999999999999999999765 5799999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||++ |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9987 69999997543 589999999999999999999954 59999999999999999999999999998653
Q ss_pred ----------------------------CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 006559 487 ----------------------------TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAK 536 (640)
Q Consensus 487 ----------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~ 536 (640)
....+|..|+|||++. ....++.++||||+||++|||+||..||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~------~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL------LQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHT------TCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHh------cCCCCCcccccchHHHHHHHHHhccccc
Confidence 2345688999999742 3345788999999999999999865544
No 199
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=321.85 Aligned_cols=252 Identities=19% Similarity=0.293 Sum_probs=182.6
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCC------eEEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKD------ELFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lV~ 406 (640)
.+.||+|+||.||+|+. .+|+.||||++... ...+.+.+|+++++.++||||+++++++.... ..|+||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 56799999999999996 56899999998643 22356778999999999999999999997653 469999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp ECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 999 78999999753 478999999999999999999954 59999999999999999999999999998764
Q ss_pred C---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHH-HHHHhhcccc-cc-cc
Q 006559 487 T---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVK-WVQMMGQDES-AW-EV 559 (640)
Q Consensus 487 ~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~-~~~~~~~~~~-~~-~~ 559 (640)
. ...+|..|+|||++.+ ...++.++||||+||++|||++|+.||.+.... ... ..+..+.... .. .+
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 253 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILN------WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHT------TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred cccCcCcCCCCcCCHHHHhC------CCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 3 3456889999997532 245788999999999999999999999754321 111 1111111100 00 00
Q ss_pred cch-------hh------ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHh
Q 006559 560 FDF-------EL------IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDI 605 (640)
Q Consensus 560 ~d~-------~~------~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i 605 (640)
... .+ ............+.+++.+||+.||++|||+.|+++ .++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000 00 000000112345677888899999999999999876 34443
No 200
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.8e-37 Score=331.87 Aligned_cols=249 Identities=21% Similarity=0.237 Sum_probs=182.7
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccCCCCHHH
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLPHGSLHS 416 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~ 416 (640)
.++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++...+..|+||||+. |+|.+
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~ 97 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQD 97 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHH
Confidence 46799999999987777789999999986542 34567889988876 89999999999999999999999996 69999
Q ss_pred hhccCCCCCC--CCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC-------------CCeEEccCCc
Q 006559 417 LLHGSRGPGR--MPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL-------------GNACISDIGV 481 (640)
Q Consensus 417 ~l~~~~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~-------------~~~kl~DfGl 481 (640)
++........ ....+..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~ 174 (434)
T 2rio_A 98 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174 (434)
T ss_dssp HHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred HHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence 9986542111 0112334578999999999999954 59999999999999654 4899999999
Q ss_pred ccccCC----------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHh
Q 006559 482 HQLFHT----------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMM 550 (640)
Q Consensus 482 ~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~ 550 (640)
++.... ...+|..|+|||++.+.........++.++|||||||++|||+| |+.||.+.........+..
T Consensus 175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~ 254 (434)
T 2rio_A 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 254 (434)
T ss_dssp CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTC
T ss_pred ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCC
Confidence 987643 12468899999987554333334678899999999999999999 9999975432222222111
Q ss_pred hcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 551 GQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 551 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.... ....... .....++.+++.+||+.||++|||+.+|++
T Consensus 255 ~~~~------~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 255 FSLD------EMKCLHD---RSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp CCCC------CCTTCCC---HHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCcc------ccccccc---ccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1100 0011111 233456778888999999999999999974
No 201
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.7e-38 Score=334.50 Aligned_cols=246 Identities=17% Similarity=0.175 Sum_probs=180.5
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc-----cchHHHHHHH---HHHhccCCCccccee-------EEEEcCC-
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER-----KKKREVDEWL---RVIGGLRHSNIVSIR-------AYCNGKD- 400 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~e~---~~l~~l~H~niv~l~-------~~~~~~~- 400 (640)
.+.||+|+||.||+|+. .+|+.||||++... ...+.+.+|+ +.+++++|||||+++ +++...+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 57899999999999995 56899999998643 2346678888 566677899999998 6666553
Q ss_pred ----------------eEEEEEeccCCCCHHHhhccCCC--CCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCC
Q 006559 401 ----------------ELFLVYDYLPHGSLHSLLHGSRG--PGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLS 462 (640)
Q Consensus 401 ----------------~~~lV~Ey~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk 462 (640)
..|+||||+ +|+|.+++..... .....++|..++.++.|++.||+|||+. +|+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 289999999 6899999975321 1112456788999999999999999964 59999999
Q ss_pred CCCeEECCCCCeEEccCCcccccCC---CccccccccCCccccCCCC----ccccCCCCCccchHHHHHHHHHHHhCCCC
Q 006559 463 SSNIVVDQLGNACISDIGVHQLFHT---PFFINDAYNAPELKFNNNN----NYSQRKFWQRCDVYSFGVVLLEILTGKMA 535 (640)
Q Consensus 463 ~~NILl~~~~~~kl~DfGl~~~~~~---~~~~~~~y~aPE~~~~~~~----~~~~~~~~~k~DV~SfGvvl~el~tg~~p 535 (640)
|+|||++.++.+||+|||+++.... ...+ ..|+|||++..... ......++.++|||||||++|||+||+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999987543 2345 88999997532100 00012578899999999999999999999
Q ss_pred CCCCCcchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 536 KGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
|....... ....+... .... ..++.+++.+||+.||++||++.++++ .++++.
T Consensus 313 f~~~~~~~-----------~~~~~~~~----~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 313 ITKDAALG-----------GSEWIFRS----CKNI---PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp C------C-----------CSGGGGSS----CCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred Cccccccc-----------chhhhhhh----ccCC---CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence 96432100 00011110 0111 234667788899999999999999985 555554
No 202
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=323.76 Aligned_cols=251 Identities=22% Similarity=0.336 Sum_probs=188.1
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
..+.||+|+||.||+|+..+ .+|+|.++.. ...+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 35789999999999999764 4899998743 22345678899999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 115 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999997643 2578899999999999999999954 599999999999998 68999999999765421
Q ss_pred ------CccccccccCCccccCCCCc--cccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 488 ------PFFINDAYNAPELKFNNNNN--YSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 488 ------~~~~~~~y~aPE~~~~~~~~--~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
...++..|+|||++...... .....++.++|||||||++|||+||+.||.........+ .......
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~---- 260 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW--QMGTGMK---- 260 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH--HHHTTCC----
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HhccCCC----
Confidence 12357789999986432111 123457889999999999999999999997544322221 1111100
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKG 609 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~ 609 (640)
+... ... ...++.+++..||+.||++|||+.+++++|+++..+.
T Consensus 261 --~~~~-~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 261 --PNLS-QIG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp --CCCC-CSS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred --CCCC-cCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 0000 001 1123667788899999999999999999999988664
No 203
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3e-37 Score=313.18 Aligned_cols=244 Identities=18% Similarity=0.240 Sum_probs=185.9
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEc--CCeEEEEEeccC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNG--KDELFLVYDYLP 410 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lV~Ey~~ 410 (640)
.+.||+|+||.||+++.. +++.||+|.+... ...+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 567999999999999965 6889999998754 234567889999999999999999998854 568999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC--CCCceecCCCCCCeEECCCCCeEEccCCcccccCCC
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN--KAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP 488 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~ 488 (640)
+|+|.+++..... ....+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~ 169 (279)
T 2w5a_A 91 GGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169 (279)
T ss_dssp TEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred CCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence 9999999875321 1224899999999999999999999543 123999999999999999999999999998876432
Q ss_pred ------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccch
Q 006559 489 ------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDF 562 (640)
Q Consensus 489 ------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 562 (640)
..++..|+|||++. ...++.++|||||||++|||+||+.||...... .......... ..
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~-~~----- 234 (279)
T 2w5a_A 170 TSFAKTFVGTPYYMSPEQMN-------RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGK-FR----- 234 (279)
T ss_dssp CHHHHHHHSCCTTCCHHHHH-------CC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC-CC-----
T ss_pred cccccccCCCccccChHHhc-------cCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhcc-cc-----
Confidence 24578899999753 345678999999999999999999999754321 1111111110 00
Q ss_pred hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006559 563 ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMI 602 (640)
Q Consensus 563 ~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L 602 (640)
. .+.. ...++.+++.+||+.||++||++.|+++.+
T Consensus 235 ~--~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 235 R--IPYR---YSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp C--CCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred c--CCcc---cCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 0 0111 123466778889999999999999998755
No 204
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.3e-37 Score=336.59 Aligned_cols=237 Identities=21% Similarity=0.331 Sum_probs=186.1
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc---------------chHHHHHHHHHHhccCCCcccceeEEEEcCCe
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK---------------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDE 401 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---------------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 401 (640)
.+.||+|+||+||+|+.. ++..||||.+.... ..+.+.+|++++++++||||+++++++.....
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 578999999999999965 57889999987531 23567889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC---CeEEcc
Q 006559 402 LFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG---NACISD 478 (640)
Q Consensus 402 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~---~~kl~D 478 (640)
.|+|||||++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999987543 589999999999999999999954 599999999999999776 699999
Q ss_pred CCcccccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcc
Q 006559 479 IGVHQLFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQD 553 (640)
Q Consensus 479 fGl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~ 553 (640)
||+++.... ...+|..|+|||++. ..++.++||||+||++|||++|+.||..... ..........
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~ 262 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK--------KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDIIKKVEKG 262 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT--------TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc--------cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcC
Confidence 999987643 245688999999752 3577899999999999999999999975432 2222222111
Q ss_pred cccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 554 ESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 554 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... ++. +.......++.+++..||+.||++|||+.|+++
T Consensus 263 ~~~---~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 263 KYY---FDF-----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCC---CCH-----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCC---CCc-----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 100 000 011112235677788899999999999999974
No 205
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-36 Score=334.46 Aligned_cols=235 Identities=18% Similarity=0.261 Sum_probs=186.4
Q ss_pred ccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 339 ELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
++||+|+||.||+|+.. +|+.||||++... ...+.+..|++++++++||||+++++++...+..|+||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 56999999999999975 6899999999754 22356778999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++..... ....+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 271 ~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~ 346 (543)
T 3c4z_A 271 DIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346 (543)
T ss_dssp BHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCB
T ss_pred CHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCccc
Confidence 99999875432 123589999999999999999999954 599999999999999999999999999986542
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhcccccccccchhh
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
...+|..|+|||++. ...++.++|||||||++|||+||+.||..... ......+..... ..
T Consensus 347 ~~~~GT~~Y~APE~l~-------~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~---------~~ 410 (543)
T 3c4z_A 347 KGYAGTPGFMAPELLL-------GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ---------AV 410 (543)
T ss_dssp CCCCSCTTTSCHHHHT-------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC---------CC
T ss_pred ccccCCccccChhhhc-------CCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc---------cc
Confidence 236789999999753 34677899999999999999999999975321 122222221111 11
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMS 596 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ 596 (640)
..+...+ ..+.+++..||+.||++||++.
T Consensus 411 ~~p~~~s---~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 411 TYPDKFS---PASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp CCCTTSC---HHHHHHHHHHSCSSGGGSCCCB
T ss_pred CCCcccC---HHHHHHHHHhccCCHhHCCCCc
Confidence 1111222 3456677789999999999763
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5e-37 Score=315.24 Aligned_cols=243 Identities=16% Similarity=0.296 Sum_probs=185.4
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCH
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
.+.||+|+||.||+|+.. ++..||+|.+... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 567999999999999975 5889999998754 3456788899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC------CC
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH------TP 488 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~------~~ 488 (640)
.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.... ..
T Consensus 104 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 104 DAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp HHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 99987532 2488999999999999999999954 59999999999999999999999999875421 23
Q ss_pred ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccCh
Q 006559 489 FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDK 568 (640)
Q Consensus 489 ~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 568 (640)
..++..|+|||++... ......++.++|||||||++|||+||+.||..... ............. ......
T Consensus 177 ~~~~~~y~aPE~~~~~--~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~------~~~~~~ 246 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCE--TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKSDPP------TLLTPS 246 (302)
T ss_dssp --CCGGGCCHHHHHHH--HTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCCC------CCSSGG
T ss_pred ccCChhhcCCeeeccc--cCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHhccCCc------ccCCcc
Confidence 4568899999975311 01244577899999999999999999999975332 1111111111100 000111
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. ....+.+++..||+.||++|||+.++++
T Consensus 247 ~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 247 K---WSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp G---SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred c---cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1 1234667788899999999999998864
No 207
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=5.2e-37 Score=312.37 Aligned_cols=237 Identities=17% Similarity=0.267 Sum_probs=183.1
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +++.||||.+... ....++.+|+..+.++ +||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 578999999999999975 7899999998754 2345677788888888 999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC-------------------C
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL-------------------G 472 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~-------------------~ 472 (640)
|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.+ .
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999975321 012588999999999999999999954 59999999999999844 4
Q ss_pred CeEEccCCcccccCCC--ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHh
Q 006559 473 NACISDIGVHQLFHTP--FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMM 550 (640)
Q Consensus 473 ~~kl~DfGl~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~ 550 (640)
.+||+|||++...... ..++..|+|||++.. ...++.++|||||||++|||++|+.++.... .+....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~ 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQE------NYTHLPKADIFALALTVVCAAGAEPLPRNGD----QWHEIR 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTT------CCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----HHHHHH
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcC------CCCCCchhhHHHHHHHHHHHhcCCCCCcchh----HHHHHH
Confidence 7999999998876543 346889999997632 2245579999999999999999998764321 111111
Q ss_pred hcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 551 GQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 551 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... . +. .+... ...+.+++.+||+.||++|||+.++++
T Consensus 242 ~~~--~-----~~--~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 242 QGR--L-----PR--IPQVL---SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp TTC--C-----CC--CSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCC--C-----CC--CCccc---CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 100 0 00 01111 234667788899999999999999864
No 208
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-37 Score=321.92 Aligned_cols=249 Identities=20% Similarity=0.341 Sum_probs=185.6
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc-------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
.+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 568999999999999964 58899999987431 1245778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC--
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~-- 487 (640)
++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 95 ET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp SE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred CC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 86 8988887543 2577888999999999999999954 599999999999999999999999999987642
Q ss_pred ----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-h-HHHHHHhhcc-ccccc-c
Q 006559 488 ----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-I-VKWVQMMGQD-ESAWE-V 559 (640)
Q Consensus 488 ----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~-~~~~~~~~~~-~~~~~-~ 559 (640)
...+|..|+|||++.+ ...++.++|||||||++|||++|+.||...... . ....+..... ...+. .
T Consensus 167 ~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 167 RAYTHQVVTRWYRAPELLFG------ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp CCCCCSCCCCTTCCHHHHTT------CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred ccCCcccccccccCchHhhC------CCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 2345889999997532 234678999999999999999999998754321 1 1111111111 00000 0
Q ss_pred c---ch---h-hc-cC--hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 560 F---DF---E-LI-MD--KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 560 ~---d~---~-~~-~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
. +. . .. .. ........++.+++..||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00 0 00 00 000112245778888899999999999999876
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.3e-36 Score=311.76 Aligned_cols=250 Identities=20% Similarity=0.313 Sum_probs=186.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||++ |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 467999999999999965 68899999986542 23567889999999999999999999999999999999998 6
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 160 (299)
T 2r3i_A 87 DLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160 (299)
T ss_dssp EHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred CHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcccc
Confidence 99999876531 2478899999999999999999954 599999999999999999999999999876532
Q ss_pred -CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch--HHHHHHhhccc-ccccc----
Q 006559 488 -PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI--VKWVQMMGQDE-SAWEV---- 559 (640)
Q Consensus 488 -~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~--~~~~~~~~~~~-~~~~~---- 559 (640)
...++..|+|||++.+ ...++.++|||||||++|||+||+.||....... ....+...... ..+..
T Consensus 161 ~~~~~~~~y~aPE~~~~------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 161 THEVVTLWYRAPEILLG------AKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp TSCBCCCTTCCHHHHTT------CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccccccCcHHhhc------cccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcC
Confidence 2345788999997532 2236789999999999999999999997543211 11111111110 00000
Q ss_pred --cchhhcc--ChH----HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 560 --FDFELIM--DKE----MEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 560 --~d~~~~~--~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+.... ... ......++.+++.+|++.||++|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 000 0111245677888899999999999999875
No 210
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.7e-37 Score=320.52 Aligned_cols=251 Identities=14% Similarity=0.206 Sum_probs=190.5
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccccc-----h--------------HHHHHHHHHHhccCCCcccceeEEEE
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERKK-----K--------------REVDEWLRVIGGLRHSNIVSIRAYCN 397 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----~--------------~~~~~e~~~l~~l~H~niv~l~~~~~ 397 (640)
..+.||+|+||.||+|+. ++..||||.+..... . +.+.+|++++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 356899999999999999 899999999875411 1 77899999999999999999999999
Q ss_pred cCCeEEEEEeccCCCCHHHh------hccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC
Q 006559 398 GKDELFLVYDYLPHGSLHSL------LHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL 471 (640)
Q Consensus 398 ~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~ 471 (640)
..+..++||||+++|+|.++ +.... ...+++..+..++.|++.||+|||+ ..+|+||||||+||+++.+
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECTT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcCC
Confidence 99999999999999999998 54321 2368999999999999999999995 1569999999999999999
Q ss_pred CCeEEccCCcccccCC----CccccccccCCccccCCCCccccCCCCC-ccchHHHHHHHHHHHhCCCCCCCCCcchHHH
Q 006559 472 GNACISDIGVHQLFHT----PFFINDAYNAPELKFNNNNNYSQRKFWQ-RCDVYSFGVVLLEILTGKMAKGDGELGIVKW 546 (640)
Q Consensus 472 ~~~kl~DfGl~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~~~~-k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~ 546 (640)
+.+||+|||+++.... ...++..|+|||++... ..++. ++|||||||++|||+||+.||...... ...
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~ 261 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNE------SSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VEL 261 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSC------CCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHH
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCC------CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHH
Confidence 9999999999987543 34568899999975322 13444 899999999999999999999754331 112
Q ss_pred HHHhhcccccccc----cchhhccC---hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 547 VQMMGQDESAWEV----FDFELIMD---KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 547 ~~~~~~~~~~~~~----~d~~~~~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.+........... ........ ........++.+++.+||+.||++||++.|+++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2222111100000 00000000 000122345777888899999999999999975
No 211
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.9e-37 Score=348.43 Aligned_cols=229 Identities=20% Similarity=0.279 Sum_probs=184.3
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-----cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-----KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
.++||+|+||.||+|+.. +++.||||+++.. ...+.+..|.+++..+ +||||+++++++.+.+.+|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 568999999999999965 5788999999753 2335567788888887 79999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC----
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH---- 486 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~---- 486 (640)
+|+|.+++.... .+++..+..++.||+.||+|||+. +||||||||+||||+.++.+||+|||+++...
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 999999998643 589999999999999999999954 59999999999999999999999999998632
Q ss_pred --CCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 487 --TPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 487 --~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
....+|..|+|||++ ....++.++|||||||++|||+||+.||..... .+..+..... ..
T Consensus 498 ~~~~~~GT~~Y~APE~l-------~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~---------~~ 559 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEII-------AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEH---------NV 559 (674)
T ss_dssp CBCCCCSCSSSCCHHHH-------TCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHSS---------CC
T ss_pred ccccccCCCcccCHhhh-------cCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHHHHHhC---------CC
Confidence 234578999999975 345678899999999999999999999975432 2222222211 11
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
..+..... ++.+++..||+.||++||++
T Consensus 560 ~~p~~~s~---~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 560 AYPKSMSK---EAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp CCCTTSCH---HHHHHHHHHSCSSSTTCTTC
T ss_pred CCCccCCH---HHHHHHHHHccCCHHHCCCC
Confidence 11222223 45667778999999999997
No 212
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.8e-37 Score=316.77 Aligned_cols=245 Identities=21% Similarity=0.305 Sum_probs=183.1
Q ss_pred hhccccccCcceEEEEEeC--CCc--EEEEEEeccc-----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD--GGD--VVVVKRIRER-----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~--~~~--~vavK~l~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|++. ++. .||||.++.. ...+.+.+|++++++++||||+++++++.... .++|||
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence 3578999999999999853 333 5899988743 23456788999999999999999999998654 899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999997542 2588999999999999999999954 599999999999999999999999999877542
Q ss_pred C---------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccc
Q 006559 488 P---------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAW 557 (640)
Q Consensus 488 ~---------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 557 (640)
. ...+..|+|||++ ....++.++|||||||++|||+| |+.||..... .............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~- 243 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESL-------KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQILHKIDKEGER- 243 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHH-------HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTSCCC-
T ss_pred cccchhhhccCCCCceeeCchhh-------cCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--HHHHHHHHccCCC-
Confidence 2 2235679999965 33456789999999999999999 9999975432 2222222111100
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
..... ....++.+++..||+.||++||++.++++.|+++...
T Consensus 244 ------~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 244 ------LPRPE---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ------CCCCc---CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00111 1223567788889999999999999999999998754
No 213
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.7e-36 Score=319.77 Aligned_cols=249 Identities=20% Similarity=0.266 Sum_probs=180.7
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccc-------------hHHHHHHHHHHhccCCCcccceeEEEEc-----C
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKK-------------KREVDEWLRVIGGLRHSNIVSIRAYCNG-----K 399 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-------------~~~~~~e~~~l~~l~H~niv~l~~~~~~-----~ 399 (640)
.+.||+|+||.||+|+..+|..||||++..... .+.+.+|++++++++||||+++++++.. .
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 568999999999999988899999999864311 2668899999999999999999999853 3
Q ss_pred CeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccC
Q 006559 400 DELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDI 479 (640)
Q Consensus 400 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 479 (640)
...|+||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 178 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDF 178 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCT
T ss_pred ceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEec
Confidence 46899999998 68888887543 2589999999999999999999954 5999999999999999999999999
Q ss_pred CcccccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hH-HHHHHhhc
Q 006559 480 GVHQLFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IV-KWVQMMGQ 552 (640)
Q Consensus 480 Gl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~-~~~~~~~~ 552 (640)
|+++.... ...++..|+|||++.. ...++.++|||||||++|||+||+.||...... .. ..+.....
T Consensus 179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 252 (362)
T 3pg1_A 179 NLAREDTADANKTHYVTHRWYRAPELVMQ------FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252 (362)
T ss_dssp TC---------------CGGGCCHHHHTT------CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred CcccccccccccceecccceecCcHHhcC------CCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 99975432 2345788999997532 245778999999999999999999999754321 11 11111111
Q ss_pred ccccc----------cccchhh---cc---ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 553 DESAW----------EVFDFEL---IM---DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 553 ~~~~~----------~~~d~~~---~~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..... ....... .. ..........+.+++..||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00000 0000000 00 0000111245778888999999999999999875
No 214
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.2e-37 Score=329.95 Aligned_cols=250 Identities=14% Similarity=0.042 Sum_probs=170.4
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc-----chHHHHHHH---HHHhccCCCccccee-------EEEEcC-
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-----KKREVDEWL---RVIGGLRHSNIVSIR-------AYCNGK- 399 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~e~---~~l~~l~H~niv~l~-------~~~~~~- 399 (640)
..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+ +.++. +||||++++ +++...
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCC
Confidence 3578999999999999964 68899999998642 234456674 55556 799987754 455432
Q ss_pred ----------------CeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHH------HHHHHHHHHHHHHhhcCCCCCce
Q 006559 400 ----------------DELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKR------LKLASDSAKGLAFLHGYNKAHLF 457 (640)
Q Consensus 400 ----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~iv 457 (640)
...|+|||||+ |+|.+++..... .+.+..+ ..++.|++.||+|||+. +|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 34899999999 899999975421 2344455 77889999999999954 599
Q ss_pred ecCCCCCCeEECCCCCeEEccCCcccccCCC---ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCC
Q 006559 458 HGHLSSSNIVVDQLGNACISDIGVHQLFHTP---FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534 (640)
Q Consensus 458 Hrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~ 534 (640)
||||||+|||++.++.+||+|||+++..... ...+..|+|||++.. ....++.++|||||||++|||+||+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNA-----STATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTC-----SEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccC-----CCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999876542 345789999997521 12457889999999999999999999
Q ss_pred CCCCCCcchHH-HHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 535 AKGDGELGIVK-WVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 535 p~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
||......... |... ............+ ........+.+++.+||+.||++|||+.++++ .++++.
T Consensus 292 Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRP-----SLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp STTBCCTTCTTCCCBC-----CTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred CCCCcCcccccchhhh-----hhhhccccccchh-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 99754221110 0000 0000000011000 00112335667888899999999999999964 444443
No 215
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.7e-37 Score=322.04 Aligned_cols=248 Identities=17% Similarity=0.303 Sum_probs=186.1
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcC-----CeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGK-----DELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. ++..||||++.... ..+.+.+|++++++++||||+++++++... ...|+|||
T Consensus 31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEc
Confidence 3578999999999999854 67889999997542 235678899999999999999999999764 36899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 997 5999998753 488999999999999999999954 599999999999999999999999999976542
Q ss_pred ---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHHHH-HHhhcccc-
Q 006559 488 ---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVKWV-QMMGQDES- 555 (640)
Q Consensus 488 ---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~~~-~~~~~~~~- 555 (640)
...+|..|+|||++. ....++.++|||||||++|||+||+.||..... .....+ ........
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHH------TBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred CCCccccccccccccCCCCCHHhc------CCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 235688999999752 234467899999999999999999999975432 221111 11111100
Q ss_pred -cccccch-------hhc----c--ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 556 -AWEVFDF-------ELI----M--DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 556 -~~~~~d~-------~~~----~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.....+. ... . .........++.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 000 0 0000112245778888999999999999999875
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.4e-36 Score=321.71 Aligned_cols=244 Identities=17% Similarity=0.259 Sum_probs=179.1
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCC------eEEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKD------ELFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lV~ 406 (640)
.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+.+++.++||||+++++++...+ ..|+||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 56899999999999985 46888999998753 22355778999999999999999999997654 789999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 110 ELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp ECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred EcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 9997 578888863 378899999999999999999954 59999999999999999999999999998764
Q ss_pred C-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccc----cc
Q 006559 487 T-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDES----AW 557 (640)
Q Consensus 487 ~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~ 557 (640)
. ...+|..|+|||++. ...++.++|||||||++|||+||+.||..... ...+......... ..
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVIL-------GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp -----------CTTCCHHHHT-------TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHC-CCCCCHHHH
T ss_pred cccccCCceecCCccCHHHhc-------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 3 245688999999753 34577899999999999999999999975432 1112111110000 00
Q ss_pred ccc-----------------c-----hhh--cc-ChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 558 EVF-----------------D-----FEL--IM-DKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 558 ~~~-----------------d-----~~~--~~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... . +.. .. .........++.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000 0 000 00 0111223456888999999999999999999975
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.5e-37 Score=316.82 Aligned_cols=244 Identities=18% Similarity=0.320 Sum_probs=184.1
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-cchHHHHHHHHHHhcc-CCCcccceeEEEEc------CCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-KKKREVDEWLRVIGGL-RHSNIVSIRAYCNG------KDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~------~~~~~lV~E 407 (640)
..+.||+|+||.||+|+. .+++.||||.+... ...+.+.+|+.+++++ +||||+++++++.. .+..++|||
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 357899999999999996 46889999998755 3456788999999998 79999999999976 468999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 108 ~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp CCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred cCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 999999999997542 12588899999999999999999954 599999999999999999999999999876542
Q ss_pred ------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccc
Q 006559 488 ------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFD 561 (640)
Q Consensus 488 ------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 561 (640)
...++..|+|||++.... .....++.++|||||||++|||+||+.||.........+ .......
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~------ 251 (326)
T 2x7f_A 182 TVGRRNTFIGTPYWMAPEVIACDE--NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF--LIPRNPA------ 251 (326)
T ss_dssp ---------CCGGGCCHHHHC----------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHHSCC------
T ss_pred CccccccccCCccccChhhhcccc--ccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--HhhcCcc------
Confidence 234688999999764221 113457789999999999999999999997533211111 1111100
Q ss_pred hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 562 FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+.. ..... ...+.+++..||+.||++||++.++++
T Consensus 252 ~~~-~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 PRL-KSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCC-SCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccC-Ccccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000 00111 234667788899999999999999975
No 218
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.9e-37 Score=346.73 Aligned_cols=244 Identities=19% Similarity=0.288 Sum_probs=191.5
Q ss_pred hhccccccCcceEEEEEeCC----CcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLDG----GDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~----~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~ 409 (640)
..+.||+|+||.||+|+... +..||||.++... ..+.+.+|+.++++++||||+++++++. .+..|+||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 35679999999999998643 4569999987542 2366888999999999999999999985 46789999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP- 488 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~- 488 (640)
++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999997543 2588999999999999999999954 5999999999999999999999999999876432
Q ss_pred ------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhcccccccccc
Q 006559 489 ------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVFD 561 (640)
Q Consensus 489 ------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 561 (640)
..++..|+|||++ ....++.++|||||||++|||++ |+.||.+.... ...........
T Consensus 546 ~~~~~~~~~t~~y~aPE~~-------~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~------ 610 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESI-------NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER------ 610 (656)
T ss_dssp --------CCGGGCCHHHH-------HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCC------
T ss_pred ceeccCCCCCcceeCHHHh-------cCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCC------
Confidence 2235689999964 34567889999999999999997 99999753321 11111111100
Q ss_pred hhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 006559 562 FELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTK 608 (640)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~ 608 (640)
...+. .....+.+++..||+.||++||++.++++.|+++..+
T Consensus 611 --~~~~~---~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 --LPMPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp --CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCc---cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 00111 1223567788889999999999999999999998643
No 219
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-36 Score=320.47 Aligned_cols=247 Identities=18% Similarity=0.281 Sum_probs=170.2
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcC------CeEEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGK------DELFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lV~ 406 (640)
.+.||+|+||.||+|+. .+|+.||||++... ...+.+.+|+++++.++||||+++++++... ...|+|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 56899999999999985 56889999998653 2345677899999999999999999999754 5689999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||+ +++|.+++... .+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 114 e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 114 HLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp ECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred ccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 999 68999988642 48899999999999999999995 459999999999999999999999999998764
Q ss_pred C---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc-chHH-HHHHhhcccc-cc-cc
Q 006559 487 T---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL-GIVK-WVQMMGQDES-AW-EV 559 (640)
Q Consensus 487 ~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~-~~~~-~~~~~~~~~~-~~-~~ 559 (640)
. ...+|..|+|||++.+ ...++.++|||||||++|||+||+.||.+... .... ..+..+.... .. .+
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 257 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLN------WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257 (367)
T ss_dssp -------CCCTTCCHHHHTT------CCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred ccCCCcCcCcCccChHHHcC------CcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 3 3456889999997532 24577899999999999999999999975432 1111 1111111100 00 00
Q ss_pred cch-------hhc--cChHH----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 560 FDF-------ELI--MDKEM----EEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 560 ~d~-------~~~--~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... .+. ..... ......+.+++.+||..||++|||+.++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000 000 00000 011235678888999999999999999875
No 220
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=311.91 Aligned_cols=245 Identities=19% Similarity=0.289 Sum_probs=177.6
Q ss_pred hccccccCcceEEEEEeCC-CcEEEEEEeccc--cchHHHHHHHHHHhccCCCcccceeEEEE--------------cCC
Q 006559 338 AELLGKGCVGATYKVVLDG-GDVVVVKRIRER--KKKREVDEWLRVIGGLRHSNIVSIRAYCN--------------GKD 400 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~-~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~--------------~~~ 400 (640)
.+.||+|+||.||+|+... ++.||||++... ...+.+.+|++++++++||||+++++++. ...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 5679999999999999764 889999998754 23466788999999999999999999874 346
Q ss_pred eEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC-CCCCeEEccC
Q 006559 401 ELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDI 479 (640)
Q Consensus 401 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~-~~~~~kl~Df 479 (640)
..++||||++ |+|.+++... ++++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 7899999998 6999999643 478899999999999999999954 599999999999997 5679999999
Q ss_pred CcccccCC---------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHh
Q 006559 480 GVHQLFHT---------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMM 550 (640)
Q Consensus 480 Gl~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~ 550 (640)
|+++.... ...++..|+|||++. ....++.++|||||||++|||+||+.||...... ...+..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~ 237 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL------SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLI 237 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHH------CTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred ccccccCCCcccccccccccccccccCcHHhc------CcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 99986532 123477899999753 2245778999999999999999999999754321 111111
Q ss_pred hcc-ccc-----ccc-------cchhhccC-----hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 551 GQD-ESA-----WEV-------FDFELIMD-----KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 551 ~~~-~~~-----~~~-------~d~~~~~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
... ... .+. ........ ........++.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 100 000 000 00000000 000112345778889999999999999999965
No 221
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.9e-36 Score=310.66 Aligned_cols=238 Identities=21% Similarity=0.357 Sum_probs=179.6
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEc-------------CCeE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNG-------------KDEL 402 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------------~~~~ 402 (640)
.+.||+|+||.||+|+. .+++.||||.+... ...+.+.+|++++++++||||+++++++.. .+..
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCce
Confidence 56899999999999996 47889999999754 334668889999999999999999998864 3578
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcc
Q 006559 403 FLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH 482 (640)
Q Consensus 403 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~ 482 (640)
|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 91 FIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp EEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred EEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 99999999999999997543 2578889999999999999999954 5999999999999999999999999998
Q ss_pred cccCC--------------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc
Q 006559 483 QLFHT--------------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG 542 (640)
Q Consensus 483 ~~~~~--------------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~ 542 (640)
+.... ...++..|+|||++.+ ...++.++|||||||++|||++ ||.... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~Di~slG~il~~l~~---p~~~~~-~ 233 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG------TGHYNEKIDMYSLGIIFFEMIY---PFSTGM-E 233 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTS------CSCCCTHHHHHHHHHHHHHHHS---CCSSHH-H
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccC------CCCCcchhhHHHHHHHHHHHHh---ccCCch-h
Confidence 76531 1235778999997532 2357789999999999999998 553211 1
Q ss_pred hHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 543 IVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.....+....... .+... .. ......+.+++.+||+.||++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~---~~~~~--~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 234 RVNILKKLRSVSI---EFPPD--FD---DNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHHSTTC---CCCTT--CC---TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHhcccccc---ccCcc--cc---ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111111111100 00000 11 122234667888899999999999999975
No 222
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.2e-36 Score=314.01 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=188.1
Q ss_pred hhccccccCcceEEEEEe--CCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCc------ccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVL--DGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSN------IVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~--~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|.. .++..||||+++.. ...+.+.+|+++++.++|+| ++++++++...+..++|||
T Consensus 18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 356799999999999986 36788999999765 33456778888888887665 9999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC-----------------
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ----------------- 470 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~----------------- 470 (640)
|+ +++|.+++.... ..++++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999997653 23588999999999999999999954 5999999999999987
Q ss_pred --CCCeEEccCCcccccCC---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-H
Q 006559 471 --LGNACISDIGVHQLFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI-V 544 (640)
Q Consensus 471 --~~~~kl~DfGl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~-~ 544 (640)
++.+||+|||+++.... ...+|..|+|||++. ...++.++|||||||++|||+||+.||....... .
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL-------ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHT-------TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhh-------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 67899999999987543 345688999999753 3457789999999999999999999997543221 1
Q ss_pred HHHHHhhc-ccc-c----------------cccc-----------chhhccChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 545 KWVQMMGQ-DES-A----------------WEVF-----------DFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 545 ~~~~~~~~-~~~-~----------------~~~~-----------d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
..+..... ... . |... .+.............++.+++.+||+.||++|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 11111110 000 0 0000 00000000011334568889999999999999999
Q ss_pred HHHHH
Q 006559 596 SIVHR 600 (640)
Q Consensus 596 ~~v~~ 600 (640)
.|+++
T Consensus 324 ~ell~ 328 (339)
T 1z57_A 324 REALK 328 (339)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99874
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1e-36 Score=325.23 Aligned_cols=257 Identities=18% Similarity=0.327 Sum_probs=183.2
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcCC------eEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGKD------ELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lV~Ey~~ 410 (640)
..++||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ ..++||||++
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~ 121 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCS
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccC
Confidence 3578999999999999987777799998865421 2236889999999999999999996543 3889999998
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC-CCCCeEEccCCcccccCC--
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGl~~~~~~-- 487 (640)
++.+........ ....+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 122 ~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 122 ETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp EEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred ccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 754443332111 112588999999999999999999954 599999999999999 799999999999987532
Q ss_pred ---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc--hHHHHHHhhccccc-ccccc
Q 006559 488 ---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG--IVKWVQMMGQDESA-WEVFD 561 (640)
Q Consensus 488 ---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~-~~~~d 561 (640)
...+|..|+|||++.+ ...++.++|||||||++|||++|+.||.+.... +...++..+..... ....+
T Consensus 197 ~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 197 PNVSYICSRYYRAPELIFG------ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CCCSSCSCGGGCCHHHHTT------CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred CCcccccCcCccCHHHHcC------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 3456889999997532 235778999999999999999999999754321 22222222111000 00000
Q ss_pred hhh-------ccChHHH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 562 FEL-------IMDKEME-----EEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 562 ~~~-------~~~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
+.. ....... ....++.+++.+||+.||++|||+.|+++ .+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 000 0000000 12245778888999999999999999975 344444
No 224
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.8e-36 Score=319.32 Aligned_cols=261 Identities=17% Similarity=0.295 Sum_probs=175.6
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc-cchHHHHHHHHHHhccCCCcccceeEEEEcCCe-------EEEEEec
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDE-------LFLVYDY 408 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-------~~lV~Ey 408 (640)
.+.||+|+||.||+|+.. ++..||||++... .......++++.++.++||||+++++++...+. .++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~ 107 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeec
Confidence 567999999999999974 6889999988654 334456677888888999999999999975433 8899999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC-CCCeEEccCCcccccCC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ-LGNACISDIGVHQLFHT 487 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGl~~~~~~ 487 (640)
+++ +|.+.+..... ....+++..+..++.|++.||.|||.. ..+|+||||||+|||++. ++.+||+|||+++....
T Consensus 108 ~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~ 184 (360)
T 3e3p_A 108 VPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP 184 (360)
T ss_dssp CSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred ccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence 986 55444331100 112578889999999999999999932 345999999999999996 89999999999987643
Q ss_pred -----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc--hHHHHHHhhcccc-cccc
Q 006559 488 -----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG--IVKWVQMMGQDES-AWEV 559 (640)
Q Consensus 488 -----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~--~~~~~~~~~~~~~-~~~~ 559 (640)
...+|..|+|||++. ....++.++|||||||++|||+||+.||...... ....++....... .+..
T Consensus 185 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3e3p_A 185 SEPNVAYICSRYYRAPELIF------GNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258 (360)
T ss_dssp TSCCCSTTSCGGGCCHHHHT------TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred CCCcccccCCcceeCHHHHc------CCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHh
Confidence 234588999999753 2334678999999999999999999999754321 1111221111100 0000
Q ss_pred cch-----hh----------ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhhc
Q 006559 560 FDF-----EL----------IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIRT 607 (640)
Q Consensus 560 ~d~-----~~----------~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~~ 607 (640)
.++ .. ...........++.+++.+||+.||++|||+.|+++ .++++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 000 00 000000112456788889999999999999999975 4555543
No 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=309.73 Aligned_cols=237 Identities=20% Similarity=0.303 Sum_probs=182.3
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEeccc------cchHHHHHHHHHHhccCCCcccceeEEEE--cCCeEEEEEec
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRER------KKKREVDEWLRVIGGLRHSNIVSIRAYCN--GKDELFLVYDY 408 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~lV~Ey 408 (640)
.+.||+|+||.||++.. .++..||||.+... ...+.+.+|++++++++||||+++++++. .....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 56899999999999996 46789999999754 23456889999999999999999999985 34589999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT- 487 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~- 487 (640)
+++| |.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 90 CVCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp CSEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred ccCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9877 7777764321 2588999999999999999999954 599999999999999999999999999876532
Q ss_pred -------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccccc
Q 006559 488 -------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVF 560 (640)
Q Consensus 488 -------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (640)
...++..|+|||++... ...++.++|||||||++|||+||+.||.... .....+......
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~~~~------ 229 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGL-----DTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--IYKLFENIGKGS------ 229 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCC-----SCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHCC------
T ss_pred ccccccccCCCCCCCcChhhccCc-----ccCCcchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHhcCC------
Confidence 23458899999976321 1223578999999999999999999997543 222222221111
Q ss_pred chhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 561 DFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 561 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
...... ....+.+++.+||+.||++|||+.++++
T Consensus 230 ---~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 230 ---YAIPGD---CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp ---CCCCSS---SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---CCCCCc---cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 001111 1234567788899999999999999985
No 226
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.7e-36 Score=309.15 Aligned_cols=244 Identities=18% Similarity=0.240 Sum_probs=188.8
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEecccc-----------chHHHHHHHHHHhccC-CCcccceeEEEEcCCeEEE
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-----------KKREVDEWLRVIGGLR-HSNIVSIRAYCNGKDELFL 404 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----------~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~l 404 (640)
.+.||+|+||.||+|+.. +++.||||.+.... ..+.+.+|+++++++. ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 568999999999999975 57899999986431 1345678899999995 9999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 405 VYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 405 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 999999999999997542 58899999999999999999995 4599999999999999999999999999877
Q ss_pred cCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 485 FHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 485 ~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
... ...++..|+|||++..... .....++.++|||||||++|||++|+.||...... ...+........ .
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~--~ 248 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMN-DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMIMSGNYQ--F 248 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHC-TTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC--C
T ss_pred cCCCcccccccCCccccCHHHhccccc-cccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHHHHHhcCCcc--c
Confidence 543 2345889999997532110 12345778999999999999999999999753321 111111111000 0
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.. +........+.+++.+||+.||++|||+.++++
T Consensus 249 ~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 249 GS------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CT------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred Cc------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00 011122335677888899999999999999864
No 227
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.3e-36 Score=322.46 Aligned_cols=251 Identities=17% Similarity=0.227 Sum_probs=185.3
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-cchHHHHHHHHHHhccC--------CCcccceeEEEE----cCCeE
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-KKKREVDEWLRVIGGLR--------HSNIVSIRAYCN----GKDEL 402 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~----~~~~~ 402 (640)
..+.||+|+||.||+|+. .+++.||||+++.. ...+.+.+|+++++.++ |+||+++++++. .....
T Consensus 41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 356899999999999985 56788999999765 33466788999888885 888999999987 55689
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCC----------
Q 006559 403 FLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLG---------- 472 (640)
Q Consensus 403 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~---------- 472 (640)
++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 9999999 566666665432 125889999999999999999999641 699999999999999775
Q ss_pred ---------------------------------------CeEEccCCcccccCC---CccccccccCCccccCCCCcccc
Q 006559 473 ---------------------------------------NACISDIGVHQLFHT---PFFINDAYNAPELKFNNNNNYSQ 510 (640)
Q Consensus 473 ---------------------------------------~~kl~DfGl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~ 510 (640)
.+||+|||+++.... ...+|..|+|||++. .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~-------~ 267 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLI-------G 267 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHH-------T
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhc-------C
Confidence 899999999987643 345688999999753 3
Q ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCCCCcc--------hHHHHHHhhcccc--------cccccch----------h-
Q 006559 511 RKFWQRCDVYSFGVVLLEILTGKMAKGDGELG--------IVKWVQMMGQDES--------AWEVFDF----------E- 563 (640)
Q Consensus 511 ~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~--------~~~~~d~----------~- 563 (640)
..++.++|||||||++|||+||+.||...... +....+....... ....+.. .
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 45778999999999999999999999743211 0111111111000 0000000 0
Q ss_pred -------hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 564 -------LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 564 -------~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
........+....+.+++.+||+.||++|||+.|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0000011344567888999999999999999999875
No 228
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-36 Score=323.89 Aligned_cols=255 Identities=21% Similarity=0.321 Sum_probs=184.6
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcC----------------
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGK---------------- 399 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~---------------- 399 (640)
..+.||+|+||.||+|+. .+|+.||||++.... +...+|+++++.++|||||++++++...
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP--RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNK 88 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccc
Confidence 357899999999999985 578999999986542 2234689999999999999999998543
Q ss_pred ----------------------CeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCce
Q 006559 400 ----------------------DELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLF 457 (640)
Q Consensus 400 ----------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 457 (640)
...++||||++ |+|.+.+..... ....+++..+..++.|+++||+|||+ .+|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~gi~ 163 (383)
T 3eb0_A 89 LGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHS---LGIC 163 (383)
T ss_dssp ---------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEE
T ss_pred ccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CcCc
Confidence 34889999998 588777653111 11258899999999999999999994 5699
Q ss_pred ecCCCCCCeEEC-CCCCeEEccCCcccccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh
Q 006559 458 HGHLSSSNIVVD-QLGNACISDIGVHQLFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT 531 (640)
Q Consensus 458 Hrdlk~~NILl~-~~~~~kl~DfGl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t 531 (640)
||||||+|||++ .++.+||+|||+++.... ...++..|+|||++.+ ...++.++||||+||++|||++
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLG------ATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTT------CSSCCTHHHHHHHHHHHHHHHH
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcC------CCCCCcchhhhhHHHHHHHHHh
Confidence 999999999998 689999999999986532 2355888999997532 2347789999999999999999
Q ss_pred CCCCCCCCCcc--hHHHHHHhhccccc---------ccc-------cchhhccChHHHHHHHHHHHHHHHccCCCCCCCC
Q 006559 532 GKMAKGDGELG--IVKWVQMMGQDESA---------WEV-------FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRP 593 (640)
Q Consensus 532 g~~p~~~~~~~--~~~~~~~~~~~~~~---------~~~-------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 593 (640)
|+.||...... +...++..+..... ... .+.....+. ....++.+++.+||+.||++||
T Consensus 238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPE---GTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCT---TCCHHHHHHHHHHCCSSGGGSC
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCC---CCCHHHHHHHHHHccCChhhCC
Confidence 99999753321 12222222111000 000 000000111 1223577888899999999999
Q ss_pred CHHHHHH--HHHHhhc
Q 006559 594 NMSIVHR--MIEDIRT 607 (640)
Q Consensus 594 s~~~v~~--~L~~i~~ 607 (640)
|+.|+++ .+++++.
T Consensus 315 t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 315 NPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CHHHHHTSGGGHHHHH
T ss_pred CHHHHhcCHHHHHHHh
Confidence 9999973 5555544
No 229
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6e-36 Score=318.06 Aligned_cols=191 Identities=24% Similarity=0.321 Sum_probs=158.7
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc-chHHHHHHHHHHhccC-CC-----cccceeEEEEcCCeEEEEEec
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK-KKREVDEWLRVIGGLR-HS-----NIVSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~~~~lV~Ey 408 (640)
..+.||+|+||.||+|+.. +++.||||+++... ...++..|+++++.++ |+ +|+++.+++...+..++||||
T Consensus 58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 3578999999999999865 57889999997653 3455667777777664 44 499999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC--CCCCeEEccCCcccccC
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD--QLGNACISDIGVHQLFH 486 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~--~~~~~kl~DfGl~~~~~ 486 (640)
++ |+|.+++..... ..+++..+..++.|++.||+|||+. +.+|+||||||+|||++ .++.+||+|||+++...
T Consensus 138 ~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 138 LS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp CC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred CC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 96 599999976531 2488999999999999999999963 35799999999999994 57889999999998765
Q ss_pred C---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 006559 487 T---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDG 539 (640)
Q Consensus 487 ~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~ 539 (640)
. ...+|..|+|||++. ...++.++|||||||++|||+||+.||...
T Consensus 213 ~~~~~~~~t~~y~aPE~~~-------~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 213 QRIYQYIQSRFYRSPEVLL-------GMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCCSSCSCGGGCCHHHHT-------TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccCCccccChHHHc-------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3 345688999999753 345778999999999999999999999853
No 230
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.5e-36 Score=317.27 Aligned_cols=248 Identities=17% Similarity=0.291 Sum_probs=185.6
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcC-----CeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGK-----DELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. +|+.||||++.... ....+.+|++++++++||||+++++++... ...++|||
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEe
Confidence 3568999999999999965 68899999997542 235577899999999999999999998754 67999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 6999998753 488999999999999999999954 599999999999999999999999999886532
Q ss_pred ----------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-HH-HHHH
Q 006559 488 ----------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI-VK-WVQM 549 (640)
Q Consensus 488 ----------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~-~~-~~~~ 549 (640)
...+|..|+|||++. ....++.++|||||||++|||++|+.||....... .. ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVML------TSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHH------SCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccCccccccchhhccccccccCCeeec------cCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 124578899999752 23457789999999999999999999997543211 11 1111
Q ss_pred hhccc--cccccc-ch-------hhc---cC---hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 550 MGQDE--SAWEVF-DF-------ELI---MD---KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 550 ~~~~~--~~~~~~-d~-------~~~---~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..... ...... .. .+. .. ........++.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11100 000000 00 000 00 000122345678888999999999999999875
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.7e-36 Score=316.91 Aligned_cols=246 Identities=18% Similarity=0.265 Sum_probs=182.0
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCeE------EEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDEL------FLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~------~lV~ 406 (640)
.+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+.+++.++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 56799999999999985 468899999997542 235677899999999999999999999876654 9999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 127 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 127 PFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp ECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred cccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 9997 689888742 378999999999999999999954 59999999999999999999999999998764
Q ss_pred C---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-h-HHHHHHhhcccc-ccccc
Q 006559 487 T---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-I-VKWVQMMGQDES-AWEVF 560 (640)
Q Consensus 487 ~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~-~~~~~~~~~~~~-~~~~~ 560 (640)
. ...+|..|+|||++.. ...++.++|||||||++|||+||+.||...... . ....+....... .....
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 269 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILS------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 269 (371)
T ss_dssp ----CTTCCCTTSCHHHHSC------CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred cCcCCcccCccccCHHHhcC------CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHh
Confidence 3 3456889999997532 245778999999999999999999999754321 1 111111111000 00000
Q ss_pred c-h-------hhc--cChH----HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 561 D-F-------ELI--MDKE----MEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 561 d-~-------~~~--~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
+ . ... .... .......+.+++.+||+.||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 0 000 0000 0112346778888999999999999999864
No 232
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-36 Score=327.21 Aligned_cols=257 Identities=21% Similarity=0.305 Sum_probs=183.4
Q ss_pred hhccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEcC------CeEEEEEecc
Q 006559 337 SAELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNGK------DELFLVYDYL 409 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lV~Ey~ 409 (640)
..++||+|+||.||+|+.. +++.||||++.... +...+|++++++++|||||+++++|... ...++||||+
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~ 135 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECC
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcc
Confidence 3568999999999999975 58999999986542 2234689999999999999999998542 2367999999
Q ss_pred CCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC-CCeEEccCCcccccCC-
Q 006559 410 PHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL-GNACISDIGVHQLFHT- 487 (640)
Q Consensus 410 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGl~~~~~~- 487 (640)
++ ++.+.+..... ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.+ +.+||+|||+++....
T Consensus 136 ~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~ 210 (420)
T 1j1b_A 136 PE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210 (420)
T ss_dssp CE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred cc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhcccC
Confidence 86 66665542110 11258899999999999999999994 569999999999999965 5789999999986532
Q ss_pred ----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCc--chHHHHHHhhcccc------
Q 006559 488 ----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGEL--GIVKWVQMMGQDES------ 555 (640)
Q Consensus 488 ----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~------ 555 (640)
...+|..|+|||++.+ ...++.++|||||||++|||++|+.||.+... .+...++..+....
T Consensus 211 ~~~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~ 284 (420)
T 1j1b_A 211 EPNVSYICSRYYRAPELIFG------ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 284 (420)
T ss_dssp CCCCSCCSCTTSCCHHHHTT------CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred CCceeeeeCCCcCCHHHHcC------CCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 3456889999997532 23577899999999999999999999975432 12222222221100
Q ss_pred ---cccccchhhccChH----HHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 556 ---AWEVFDFELIMDKE----MEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 556 ---~~~~~d~~~~~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
..+..-+.+..... ......++.+++.+||+.||++||++.|+++ .+++++
T Consensus 285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 00000000000000 0011245778888999999999999999974 455554
No 233
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.1e-36 Score=304.14 Aligned_cols=242 Identities=19% Similarity=0.273 Sum_probs=189.2
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccc----cchHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRER----KKKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+.. +++.||||.+... ...+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 568999999999999975 6889999998654 23567889999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCC---CCeEEccCCcccccCCC-
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQL---GNACISDIGVHQLFHTP- 488 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGl~~~~~~~- 488 (640)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++.....
T Consensus 107 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999886543 588999999999999999999954 59999999999999754 47999999998865432
Q ss_pred ----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhh
Q 006559 489 ----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFEL 564 (640)
Q Consensus 489 ----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 564 (640)
..++..|+|||++. ..++.++||||||+++|||+||+.||..... ....+......... + .
T Consensus 179 ~~~~~~~~~~y~aPE~~~--------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~---~--~ 243 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLR--------GTYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVETGKYAF---D--L 243 (287)
T ss_dssp SCSCHHHHHTTCCHHHHT--------TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCCCC---C--S
T ss_pred ccccccCcccccChHHhc--------CCCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCCCC---C--c
Confidence 23477899999753 2367899999999999999999999975432 12222221111000 0 0
Q ss_pred ccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHh
Q 006559 565 IMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDI 605 (640)
Q Consensus 565 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i 605 (640)
+.......++.+++..||+.||++|||+.++++ .+++.
T Consensus 244 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 244 ---PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp ---GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred ---hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 001112234677888899999999999999986 44443
No 234
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6e-36 Score=310.72 Aligned_cols=250 Identities=22% Similarity=0.337 Sum_probs=182.8
Q ss_pred hhccccccCcceEEEEEe--CCCcEEEEEEecccc----chHHHHHHHHHHhcc---CCCcccceeEEEE-----cCCeE
Q 006559 337 SAELLGKGCVGATYKVVL--DGGDVVVVKRIRERK----KKREVDEWLRVIGGL---RHSNIVSIRAYCN-----GKDEL 402 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~--~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l---~H~niv~l~~~~~-----~~~~~ 402 (640)
..+.||+|+||.||+|+. .+++.||||++.... ....+.+|+.+++.+ +||||+++++++. .....
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 94 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence 356899999999999997 467889999987542 123455666666555 8999999999987 45679
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcc
Q 006559 403 FLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVH 482 (640)
Q Consensus 403 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~ 482 (640)
++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 95 ~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 95 TLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp EEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred EEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCccc
Confidence 99999998 699999976532 2488999999999999999999954 5999999999999999999999999998
Q ss_pred cccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHH-HHHHhhccc-
Q 006559 483 QLFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVK-WVQMMGQDE- 554 (640)
Q Consensus 483 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~-~~~~~~~~~- 554 (640)
+.... ...++..|+|||++. ...++.++|||||||++|||+||+.||...... ... .+.......
T Consensus 168 ~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 168 RIYSFQMALTSVVVTLWYRAPEVLL-------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp CCCCGGGGGCCCCCCCTTCCHHHHT-------TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred ccccCCCCccccccccceeCHHHHh-------cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 76542 234588999999753 345778999999999999999999999754321 111 111111100
Q ss_pred cccc--------ccchh--hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 555 SAWE--------VFDFE--LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 555 ~~~~--------~~d~~--~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+. .+... .............+.+++.+||+.||++||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00000 0000000112234667888899999999999999874
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.1e-36 Score=312.87 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=163.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhccCCCcccceeEEEEc----CCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGLRHSNIVSIRAYCNG----KDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lV~Ey~~~g 412 (640)
.++||+|+||.||+|+.. +++.||||++.... +...+....++.++||||+++++++.. ....++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg 111 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG 111 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence 457999999999999975 68899999987542 222223344566799999999999876 44589999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC---CCCeEEccCCcccccCC--
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVHQLFHT-- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl~~~~~~-- 487 (640)
+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 112 ~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~ 185 (336)
T 3fhr_A 112 ELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA 185 (336)
T ss_dssp EHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----
T ss_pred CHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceeccccc
Confidence 99999986532 3589999999999999999999954 5999999999999986 45699999999986543
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHH--HHHHhhcccccccccchh
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVK--WVQMMGQDESAWEVFDFE 563 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~d~~ 563 (640)
...++..|+|||++ ....++.++|||||||++|||+||+.||......... ..+..... ...
T Consensus 186 ~~~~~~t~~y~aPE~~-------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~ 251 (336)
T 3fhr_A 186 LQTPCYTPYYVAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG-------QYG 251 (336)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------C
T ss_pred cccCCCCcCccChhhh-------CCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc-------ccc
Confidence 23458899999964 3345678999999999999999999999743221110 00000000 000
Q ss_pred hccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 564 LIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 564 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.. .+.......++.+++..||+.||++|||+.|+++
T Consensus 252 ~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 252 FP-NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CC-TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cC-chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0001122334667888899999999999999986
No 236
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.7e-36 Score=310.62 Aligned_cols=243 Identities=17% Similarity=0.231 Sum_probs=183.6
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc----chHHHHHHHHHHhccC--CCcccceeEEEEcCCeEEEEEeccC
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK----KKREVDEWLRVIGGLR--HSNIVSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lV~Ey~~ 410 (640)
..+.||+|+||.||+++..+++.||||.+.... ..+.+.+|++++++++ ||||+++++++...+..++||| +.
T Consensus 32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 110 (313)
T 3cek_A 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 110 (313)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cC
Confidence 356899999999999998889999999986542 2356788999999997 4999999999999999999999 56
Q ss_pred CCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC---
Q 006559 411 HGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 411 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~--- 487 (640)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++ +.+||+|||+++....
T Consensus 111 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 111 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp SEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 889999998643 588999999999999999999954 5999999999999964 8999999999986532
Q ss_pred -----CccccccccCCccccCCCCc----cccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccccc
Q 006559 488 -----PFFINDAYNAPELKFNNNNN----YSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWE 558 (640)
Q Consensus 488 -----~~~~~~~y~aPE~~~~~~~~----~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 558 (640)
...++..|+|||++...... .....++.++|||||||++|||+||+.||................. ...
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~- 259 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN-HEI- 259 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT-SCC-
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcc-ccc-
Confidence 22458899999986432111 1124678899999999999999999999975332222211111111 000
Q ss_pred ccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 559 VFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 559 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
..+... ..++.+++.+||+.||++||++.|+++
T Consensus 260 ------~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 260 ------EFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ------CCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------CCcccc---hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 001111 234667788899999999999999975
No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.9e-36 Score=313.50 Aligned_cols=255 Identities=20% Similarity=0.251 Sum_probs=170.0
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccc---hHHHHHHHH-HHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKK---KREVDEWLR-VIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+.. +++.||||++..... ..++..|+. +++.++||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 567999999999999974 688999999976522 233444444 77888999999999999999999999999985
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCC----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTP---- 488 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~---- 488 (640)
+|.+++..........+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 183 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT 183 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccc
Confidence 887776531111122588999999999999999999953 15999999999999999999999999999775432
Q ss_pred -ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 489 -FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 489 -~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
..++..|+|||++... .....++.++|||||||++|||+||+.||....... .......... .+.+..
T Consensus 184 ~~~gt~~y~aPE~~~~~---~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~------~~~~~~- 252 (327)
T 3aln_A 184 RDAGCRPYMAPERIDPS---ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQLTQVVKGD------PPQLSN- 252 (327)
T ss_dssp -------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCSC------CCCCCC-
T ss_pred cCCCCccccCceeeccc---cCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHHHHHhcCC------CCCCCC-
Confidence 2467889999975221 123457889999999999999999999997432111 1111100000 000000
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHhh
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDIR 606 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i~ 606 (640)
........++.+++..||+.||++||++.++++ .+.+..
T Consensus 253 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 000112235677888899999999999999975 444443
No 238
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=322.55 Aligned_cols=239 Identities=18% Similarity=0.218 Sum_probs=176.2
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+....|+|||||+ |+|.
T Consensus 28 ~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred cCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 3578999999997665567789999999865422 2356788899988 79999999999999999999999996 6999
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC-----CCCeEEccCCcccccCC---
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ-----LGNACISDIGVHQLFHT--- 487 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~-----~~~~kl~DfGl~~~~~~--- 487 (640)
+++..... .+.+.....++.|++.||+|||+. +|+||||||+|||++. ...+||+|||+++....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99976542 233445678999999999999954 5999999999999953 34688999999986542
Q ss_pred ------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCcchHHHHHHhhccccccccc
Q 006559 488 ------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILT-GKMAKGDGELGIVKWVQMMGQDESAWEVF 560 (640)
Q Consensus 488 ------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (640)
...+|..|+|||++... ....++.++|||||||++|||+| |+.||........... .... .....
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~----~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~---~~~~-~~~~~ 250 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSED----CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL---LGAC-SLDCL 250 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC-------CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH---TTCC-CCTTS
T ss_pred ceeeccccCCCcCccChhhhhcc----cccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH---hccC-Ccccc
Confidence 23468999999976321 13456779999999999999999 8999965432222111 1100 00000
Q ss_pred chhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006559 561 DFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVH 599 (640)
Q Consensus 561 d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~ 599 (640)
. ... .....+.+++.+||+.||++|||+.+|+
T Consensus 251 ~----~~~---~~~~~~~~li~~~L~~dP~~Rps~~evl 282 (432)
T 3p23_A 251 H----PEK---HEDVIARELIEKMIAMDPQKRPSAKHVL 282 (432)
T ss_dssp C----TTC---HHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred C----ccc---cccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence 0 111 2223456788889999999999999998
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=314.37 Aligned_cols=246 Identities=17% Similarity=0.249 Sum_probs=181.7
Q ss_pred hccccccCcceEEEEEe-CCCcEEEEEEecccc----chHHHHHHHHHHhccCCCcccceeEEEEcCCe------EEEEE
Q 006559 338 AELLGKGCVGATYKVVL-DGGDVVVVKRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDE------LFLVY 406 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~~lV~ 406 (640)
.+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+.++++++||||+++++++...+. .|+||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 56799999999999996 468899999997542 23567789999999999999999999987643 59999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccC
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 109 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp ECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred cccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 9997 688887742 378999999999999999999954 59999999999999999999999999998764
Q ss_pred C---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hHH-HHHHhhcccc-c-ccc
Q 006559 487 T---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IVK-WVQMMGQDES-A-WEV 559 (640)
Q Consensus 487 ~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~~-~~~~~~~~~~-~-~~~ 559 (640)
. ...++..|+|||++.. ...++.++|||||||++|||+||+.||...... ... ..+..+.... . ..+
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~------~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILS------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp ------CCSBCCSCHHHHSC------CSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred CCccccccCcCcCCHHHHhC------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3 2356889999997532 245678999999999999999999999754321 111 1111111000 0 000
Q ss_pred cch-------------hhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 560 FDF-------------ELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 560 ~d~-------------~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.+. .............++.+++.+||+.||++|||+.++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 252 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp SCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 00000000122345777888899999999999999864
No 240
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.7e-35 Score=310.68 Aligned_cols=250 Identities=19% Similarity=0.230 Sum_probs=185.3
Q ss_pred hhccccccCcceEEEEEeC-C-CcEEEEEEeccc-cchHHHHHHHHHHhccCCCc------ccceeEEEEcCCeEEEEEe
Q 006559 337 SAELLGKGCVGATYKVVLD-G-GDVVVVKRIRER-KKKREVDEWLRVIGGLRHSN------IVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~-~-~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~~lV~E 407 (640)
..+.||+|+||.||+|+.. + +..||||.++.. ...+.+.+|++++++++|++ ++.+.+++...+..++|||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 3568999999999999864 3 368999999765 33556778898888888766 8999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEE-------------------
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVV------------------- 468 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl------------------- 468 (640)
|+ +|++.+++..... .++++..+..++.|++.||+|||+ .+|+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENNF---QPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccccccc
Confidence 99 6677777765431 258899999999999999999994 569999999999999
Q ss_pred CCCCCeEEccCCcccccCC---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc-hH
Q 006559 469 DQLGNACISDIGVHQLFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-IV 544 (640)
Q Consensus 469 ~~~~~~kl~DfGl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-~~ 544 (640)
+.++.+||+|||+++.... ...+|..|+|||++. ...++.++|||||||++|||+||+.||...... ..
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 248 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL-------ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHT-------TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeee-------cCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 5678999999999987543 345688999999753 345778999999999999999999999754321 11
Q ss_pred HHHHHhh-ccccc--------ccccchhhc--------------------cChHHHHHHHHHHHHHHHccCCCCCCCCCH
Q 006559 545 KWVQMMG-QDESA--------WEVFDFELI--------------------MDKEMEEEMRALLQVALLCLAPLPKDRPNM 595 (640)
Q Consensus 545 ~~~~~~~-~~~~~--------~~~~d~~~~--------------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 595 (640)
..+.... ..... ......... ..........++.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 1111111 00000 000000000 000011234467889999999999999999
Q ss_pred HHHHH
Q 006559 596 SIVHR 600 (640)
Q Consensus 596 ~~v~~ 600 (640)
.|+++
T Consensus 329 ~e~l~ 333 (355)
T 2eu9_A 329 AEALL 333 (355)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99864
No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=306.60 Aligned_cols=249 Identities=20% Similarity=0.260 Sum_probs=171.4
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccc----hHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKK----KREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHG 412 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~g 412 (640)
.+.||+|+||.||+|+.. +|+.||||++..... .+.+.++..+++.++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 567999999999999975 688999999976522 223444556788899999999999999999999999999 45
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC-----
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT----- 487 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~----- 487 (640)
.+..+..... ..+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++....
T Consensus 109 ~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (318)
T 2dyl_A 109 CAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD 182 (318)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccc
Confidence 5555544322 2588999999999999999999952 2599999999999999999999999999876532
Q ss_pred CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC
Q 006559 488 PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD 567 (640)
Q Consensus 488 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 567 (640)
...++..|+|||++... ......++.++|||||||++|||+||+.||.........+......... .....
T Consensus 183 ~~~~~~~y~aPE~~~~~--~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~ 253 (318)
T 2dyl_A 183 RSAGCAAYMAPERIDPP--DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP-------LLPGH 253 (318)
T ss_dssp ----CCTTCCHHHHC----------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC-------CCCSS
T ss_pred ccCCCccccChhhcccc--cccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC-------CCCcc
Confidence 23468899999976321 1123457789999999999999999999997533222222211111100 00000
Q ss_pred hHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHHh
Q 006559 568 KEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR--MIEDI 605 (640)
Q Consensus 568 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~--~L~~i 605 (640)
. ....++.+++..||+.||++||++.++++ .+++.
T Consensus 254 ~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 254 M---GFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp S---CCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred C---CCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 1 11234667788899999999999999975 44443
No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1e-35 Score=314.94 Aligned_cols=248 Identities=16% Similarity=0.258 Sum_probs=184.5
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc-cchHHHHHHHHHHhccC-----------CCcccceeEEEEcCC---
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER-KKKREVDEWLRVIGGLR-----------HSNIVSIRAYCNGKD--- 400 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~~~~~--- 400 (640)
..+.||+|+||.||+|+. .+++.||||++... ...+.+.+|++++++++ ||||+++++++...+
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 357899999999999995 56889999999755 33456778888888776 899999999998654
Q ss_pred -eEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC------CCCC
Q 006559 401 -ELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD------QLGN 473 (640)
Q Consensus 401 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~------~~~~ 473 (640)
..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+. .+|+||||||+|||++ ..+.
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred ceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCCcCcce
Confidence 789999999 8999999976432 2488999999999999999999964 1599999999999994 4458
Q ss_pred eEEccCCcccccCC---CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcc--------
Q 006559 474 ACISDIGVHQLFHT---PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELG-------- 542 (640)
Q Consensus 474 ~kl~DfGl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~-------- 542 (640)
+||+|||+++.... ...+|..|+|||++. ...++.++|||||||++|||+||+.||......
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~-------~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLL-------GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHH-------TCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHh-------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 99999999987653 345688999999753 345778999999999999999999999743211
Q ss_pred hHHHHHHhhcccc-----------------cc------------cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCC
Q 006559 543 IVKWVQMMGQDES-----------------AW------------EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRP 593 (640)
Q Consensus 543 ~~~~~~~~~~~~~-----------------~~------------~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 593 (640)
+....+....... .. .+....... ......++.+++..||+.||++||
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF---SKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCC---CHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccC---CcchHHHHHHHHHHHhccCccccC
Confidence 1111111111000 00 000000001 124456788899999999999999
Q ss_pred CHHHHHH
Q 006559 594 NMSIVHR 600 (640)
Q Consensus 594 s~~~v~~ 600 (640)
|+.|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999975
No 243
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.8e-35 Score=298.25 Aligned_cols=225 Identities=10% Similarity=0.008 Sum_probs=172.5
Q ss_pred hccccccCcceEEEEEeC-CCcEEEEEEeccccc-----hHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEeccCC
Q 006559 338 AELLGKGCVGATYKVVLD-GGDVVVVKRIRERKK-----KREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPH 411 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-----~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~ 411 (640)
.+.||+|+||.||+|+.. +++.||||.+..... .+.+.+|++.+.+++||||+++++++...+..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 468999999999999975 488999999976522 25678899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCCccc
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFI 491 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 491 (640)
++|.+++... ....+..+++.|++.||+|||+. +|+||||||+|||++.++.+||+++|
T Consensus 116 ~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 116 GSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp EEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred CCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 9999999532 23446788999999999999954 59999999999999999999998543
Q ss_pred cccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcch-HHHHHHhhcccccccccchhhccC-hH
Q 006559 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGI-VKWVQMMGQDESAWEVFDFELIMD-KE 569 (640)
Q Consensus 492 ~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~-~~ 569 (640)
|++| ++.++|||||||++|||+||+.||....... .. ............. ..
T Consensus 175 ---~~~~--------------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 228 (286)
T 3uqc_A 175 ---TMPD--------------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA---------PAERDTAGQPIEPADI 228 (286)
T ss_dssp ---CCTT--------------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE---------ECCBCTTSCBCCHHHH
T ss_pred ---ccCC--------------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH---------HHHHHhccCCCChhhc
Confidence 3332 3578999999999999999999997533210 00 0000000000000 00
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 006559 570 MEEEMRALLQVALLCLAPLPKDRPNMSIVHRMIEDIRTKGS 610 (640)
Q Consensus 570 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~~L~~i~~~~~ 610 (640)
......++.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 229 ~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 229 DRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp CTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred ccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 01122346778888999999999 99999999999886543
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.9e-36 Score=310.27 Aligned_cols=230 Identities=17% Similarity=0.326 Sum_probs=181.9
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEecccc--------chHHHHHHHHHHhccC--CCcccceeEEEEcCCeEEEE
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERK--------KKREVDEWLRVIGGLR--HSNIVSIRAYCNGKDELFLV 405 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--------~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lV 405 (640)
..+.||+|+||.||+|+. .+++.||||.+.... ..+.+..|+.++++++ |+||+++++++...+..++|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv 126 (320)
T 3a99_A 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 126 (320)
T ss_dssp EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEE
Confidence 357899999999999985 568889999987542 1234567888888886 59999999999999999999
Q ss_pred EeccCC-CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC-CCCCeEEccCCccc
Q 006559 406 YDYLPH-GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIGVHQ 483 (640)
Q Consensus 406 ~Ey~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGl~~ 483 (640)
|||+.. ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++ +++.+||+|||+++
T Consensus 127 ~e~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 127 LERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEcCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 999976 89999997543 58899999999999999999995 4599999999999999 78999999999988
Q ss_pred ccCCC----ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccc
Q 006559 484 LFHTP----FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEV 559 (640)
Q Consensus 484 ~~~~~----~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
..... ..++..|+|||++... ..++.++|||||||++|||+||+.||.... .... ..
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~~---~~------ 259 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRYH------RYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIR---GQ------ 259 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHS------CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH---CC------
T ss_pred ccccccccCCCCCccCCChHHhccC------CCCCccchHHhHHHHHHHHHHCCCCCCChh----hhhc---cc------
Confidence 76532 3468899999975321 223578999999999999999999996421 1000 00
Q ss_pred cchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 560 FDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 560 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
....... ..++.+++.+||+.||++|||+.++++
T Consensus 260 ----~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 ----VFFRQRV---SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----CCCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----ccccccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0001111 124667788899999999999999875
No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.1e-35 Score=299.07 Aligned_cols=223 Identities=15% Similarity=0.204 Sum_probs=169.3
Q ss_pred ccccccCcceEEEEEe-CCCcEEEEEEeccccchHHHHHHHHHH-hccCCCcccceeEEEEc----CCeEEEEEeccCCC
Q 006559 339 ELLGKGCVGATYKVVL-DGGDVVVVKRIRERKKKREVDEWLRVI-GGLRHSNIVSIRAYCNG----KDELFLVYDYLPHG 412 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~~lV~Ey~~~g 412 (640)
++||+|+||.||+++. .+++.||||.++.. ..+.+|+.++ +.++||||+++++++.. ....++||||+++|
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~ 100 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG 100 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc---HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCC
Confidence 6799999999999996 56889999998643 4456677766 56699999999999876 66799999999999
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECC---CCCeEEccCCcccccCCCc
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQ---LGNACISDIGVHQLFHTPF 489 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGl~~~~~~~~ 489 (640)
+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+++....
T Consensus 101 ~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-- 172 (299)
T 3m2w_A 101 ELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-- 172 (299)
T ss_dssp BHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT--
T ss_pred cHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEecccccccccc--
Confidence 99999986532 258999999999999999999995 45999999999999998 78999999999865431
Q ss_pred cccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccC-h
Q 006559 490 FINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMD-K 568 (640)
Q Consensus 490 ~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~ 568 (640)
..++.++|||||||++|||+||+.||......... . .....+........ .
T Consensus 173 ---------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~--~-----~~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 173 ---------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--P-----GMKTRIRMGQYEFPNP 224 (299)
T ss_dssp ---------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC---------C-----CSCCSSCTTCCSSCHH
T ss_pred ---------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh--H-----HHHHHHhhccccCCch
Confidence 23457899999999999999999999743211100 0 00000000000011 0
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 569 EMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 569 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
.......++.+++..||+.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11122345777888899999999999999986
No 246
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=306.39 Aligned_cols=230 Identities=20% Similarity=0.324 Sum_probs=176.3
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccccc--------hHHHHHHHHHHhcc----CCCcccceeEEEEcCCeEE
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRERKK--------KREVDEWLRVIGGL----RHSNIVSIRAYCNGKDELF 403 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--------~~~~~~e~~~l~~l----~H~niv~l~~~~~~~~~~~ 403 (640)
..+.||+|+||.||+|+. .+++.||||.+..... ...+..|+.++.++ +||||+++++++...+..+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~ 114 (312)
T 2iwi_A 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFM 114 (312)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CE
T ss_pred EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEE
Confidence 357899999999999985 5688999999965421 12344677777777 8999999999999889999
Q ss_pred EEEec-cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEEC-CCCCeEEccCCc
Q 006559 404 LVYDY-LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVD-QLGNACISDIGV 481 (640)
Q Consensus 404 lV~Ey-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGl 481 (640)
+|||| +++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 115 ~v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 115 LVLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp EEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred EEEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 99999 78999999997643 589999999999999999999954 599999999999999 889999999999
Q ss_pred ccccCC----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccc
Q 006559 482 HQLFHT----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAW 557 (640)
Q Consensus 482 ~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 557 (640)
++.... ...++..|+|||++.. ....+.++|||||||++|||+||+.||.... .... .
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~---~----- 248 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISR------HQYHALPATVWSLGILLYDMVCGDIPFERDQ----EILE---A----- 248 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHH------SCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH---T-----
T ss_pred hhhcccCcccccCCcccccCceeeec------CCCCCccchHHHHHHHHHHHHHCCCCCCChH----HHhh---h-----
Confidence 887643 2345788999997532 1222458999999999999999999996421 1100 0
Q ss_pred cccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006559 558 EVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVHR 600 (640)
Q Consensus 558 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~~ 600 (640)
........ ..++.+++.+||+.||++||++.|+++
T Consensus 249 -----~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 249 -----ELHFPAHV---SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -----CCCCCTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----ccCCcccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011111 224667788899999999999999975
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.1e-35 Score=327.48 Aligned_cols=259 Identities=24% Similarity=0.289 Sum_probs=190.2
Q ss_pred hhccccccCcceEEEEEe-CCCcEEEEEEeccc---cchHHHHHHHHHHhccCCCcccceeEEEEc------CCeEEEEE
Q 006559 337 SAELLGKGCVGATYKVVL-DGGDVVVVKRIRER---KKKREVDEWLRVIGGLRHSNIVSIRAYCNG------KDELFLVY 406 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~~~lV~ 406 (640)
..+.||+|+||.||+|.. .+|..||||++... ...+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 357899999999999986 46889999998754 234567889999999999999999998765 66789999
Q ss_pred eccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC---eEEccCCccc
Q 006559 407 DYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN---ACISDIGVHQ 483 (640)
Q Consensus 407 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl~~ 483 (640)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 99999999999986432 2247888899999999999999995 45999999999999997665 9999999998
Q ss_pred ccCC-----CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhccccc--
Q 006559 484 LFHT-----PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESA-- 556 (640)
Q Consensus 484 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 556 (640)
.... ...++..|+|||++ ....++.++|||||||++|||+||+.||.... ....|..........
T Consensus 173 ~~~~~~~~~~~~gt~~Y~APE~l-------~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~~~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 173 ELDQGELCTEFVGTLQYLAPELL-------EQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-QPVQWHGKVREKSNEHI 244 (676)
T ss_dssp BTTSCCCCCCCCSCCTTCSSCSS-------CCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-HHHHSSTTCC------C
T ss_pred ccccccccccccCCcccCChHHh-------ccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-chhhhhhhhhcccchhh
Confidence 7643 23568899999964 34567889999999999999999999996432 222222211111000
Q ss_pred --ccc------cchhhccCh-HHHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHHhhcc
Q 006559 557 --WEV------FDFELIMDK-EMEEEMRALLQVALLCLAPLPKDRPNMSI-----VHRMIEDIRTK 608 (640)
Q Consensus 557 --~~~------~d~~~~~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~-----v~~~L~~i~~~ 608 (640)
... +........ ........+.+++..||+.||++|||+.+ ..+.++++...
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 000 000000000 01123345777888899999999999988 45667776654
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-34 Score=329.04 Aligned_cols=230 Identities=16% Similarity=0.217 Sum_probs=180.3
Q ss_pred hccccccCcceEEEEEeC--CCcEEEEEEecccc---chHHHHHHHHHHhccCCCcccceeEEEEcCCe-----EEEEEe
Q 006559 338 AELLGKGCVGATYKVVLD--GGDVVVVKRIRERK---KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDE-----LFLVYD 407 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~--~~~~vavK~l~~~~---~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-----~~lV~E 407 (640)
.+.||+|+||.||+|+.. +++.||||.+.... ....+.+|++++++++||||+++++++...+. .|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 567999999999999975 58899999986542 23467789999999999999999999987654 799999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|+++++|.+++.. .++|..++.++.||+.||+|||+. +||||||||+|||++.+ .+||+|||+++....
T Consensus 165 ~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp CCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred eCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 9999999987753 489999999999999999999954 59999999999999985 899999999987654
Q ss_pred --CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhc
Q 006559 488 --PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELI 565 (640)
Q Consensus 488 --~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 565 (640)
...+|..|+|||++.. ..+.++|||||||++|||++|..|+...... . +.
T Consensus 234 ~~~~~gt~~y~aPE~~~~--------~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------~----~~----- 285 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRT--------GPTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------G----LP----- 285 (681)
T ss_dssp CSCCCCCTTTSCTTHHHH--------CSCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------S----CC-----
T ss_pred CCccCCCccccCHHHHcC--------CCCCceehhhhHHHHHHHHhCCCCCcccccc-----------c----cc-----
Confidence 3457899999997532 2367999999999999999999887532100 0 00
Q ss_pred cChHHHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHHhh
Q 006559 566 MDKEMEEEMRALLQVALLCLAPLPKDRPN-MSIVHRMIEDIR 606 (640)
Q Consensus 566 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~~v~~~L~~i~ 606 (640)
...........+.+++.+||+.||++||+ +.++...+..+.
T Consensus 286 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 286 EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 00011122345777888999999999995 666666666653
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-33 Score=301.02 Aligned_cols=239 Identities=16% Similarity=0.089 Sum_probs=168.8
Q ss_pred hccccccCcceEEEEE-eCCCcEEEEEEeccc-----cchHHHHHHHHHHhccCC-Ccccce---------eEE------
Q 006559 338 AELLGKGCVGATYKVV-LDGGDVVVVKRIRER-----KKKREVDEWLRVIGGLRH-SNIVSI---------RAY------ 395 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~-~~~~~~vavK~l~~~-----~~~~~~~~e~~~l~~l~H-~niv~l---------~~~------ 395 (640)
.++||+|+||+||+|+ ..+|+.||||++... ...+.+.+|+.+++.++| +|.... ...
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 5689999999999999 456899999998733 224668889999998887 322111 111
Q ss_pred ------EEc-----CCeEEEEEeccCCCCHHHhhccCC--CCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCC
Q 006559 396 ------CNG-----KDELFLVYDYLPHGSLHSLLHGSR--GPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLS 462 (640)
Q Consensus 396 ------~~~-----~~~~~lV~Ey~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk 462 (640)
+.. ....+++|+++ .++|.+++.... .....++++..++.++.|+++||+|||+ .+|||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcc
Confidence 111 22467777765 689999884110 0112358899999999999999999995 459999999
Q ss_pred CCCeEECCCCCeEEccCCcccccCC---CccccccccCCccccCCC--Ccc-ccCCCCCccchHHHHHHHHHHHhCCCCC
Q 006559 463 SSNIVVDQLGNACISDIGVHQLFHT---PFFINDAYNAPELKFNNN--NNY-SQRKFWQRCDVYSFGVVLLEILTGKMAK 536 (640)
Q Consensus 463 ~~NILl~~~~~~kl~DfGl~~~~~~---~~~~~~~y~aPE~~~~~~--~~~-~~~~~~~k~DV~SfGvvl~el~tg~~p~ 536 (640)
|+|||++.++.+||+|||+++.... ...+ ..|+|||++.... ... ....++.++|||||||++|||+||+.||
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf 317 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN 317 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999876543 2345 8999999763211 000 3345778999999999999999999999
Q ss_pred CCCCcchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 006559 537 GDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLCLAPLPKDRPNMSIVH 599 (640)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~~v~ 599 (640)
...... .....++... ... ..++.+++..||+.||++||++.+++
T Consensus 318 ~~~~~~-----------~~~~~~~~~~----~~~---~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 318 TDDAAL-----------GGSEWIFRSC----KNI---PQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CTTGGG-----------SCSGGGGSSC----CCC---CHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCcchh-----------hhHHHHHhhc----ccC---CHHHHHHHHHHccCChhhCcCHHHHH
Confidence 753211 0001111100 111 13467778889999999999977764
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=2.9e-33 Score=292.04 Aligned_cols=234 Identities=13% Similarity=0.121 Sum_probs=171.6
Q ss_pred hhccccccCcceEEEEEeCCCcEEEEEEecccc----------chHHHHHHHHHHhccC---------CCcccceeEEEE
Q 006559 337 SAELLGKGCVGATYKVVLDGGDVVVVKRIRERK----------KKREVDEWLRVIGGLR---------HSNIVSIRAYCN 397 (640)
Q Consensus 337 ~~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----------~~~~~~~e~~~l~~l~---------H~niv~l~~~~~ 397 (640)
..+.||+|+||+||+|+. +|+.||||++.... ..+.+.+|+++++.++ |||||++.+++.
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~ 102 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEE
T ss_pred heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeE
Confidence 467899999999999998 67999999997542 1267888888888775 777777666542
Q ss_pred -----------------c-------------CCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHH
Q 006559 398 -----------------G-------------KDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAF 447 (640)
Q Consensus 398 -----------------~-------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~y 447 (640)
. .+..|+||||+++|++.+.+... .+++..+..++.|++.||+|
T Consensus 103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~------~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK------LSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT------CCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc------CCCHHHHHHHHHHHHHHHHH
Confidence 2 67899999999999777666432 47899999999999999999
Q ss_pred hh-cCCCCCceecCCCCCCeEECCCC--------------------CeEEccCCcccccCCC-ccccccccCCccccCCC
Q 006559 448 LH-GYNKAHLFHGHLSSSNIVVDQLG--------------------NACISDIGVHQLFHTP-FFINDAYNAPELKFNNN 505 (640)
Q Consensus 448 LH-~~~~~~ivHrdlk~~NILl~~~~--------------------~~kl~DfGl~~~~~~~-~~~~~~y~aPE~~~~~~ 505 (640)
|| +.+ |+||||||+|||++.++ .+||+|||+++..... ..+|..|+|||++.+.
T Consensus 177 lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~- 252 (336)
T 2vuw_A 177 AEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGD- 252 (336)
T ss_dssp HHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCC-
T ss_pred HHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCC-
Confidence 99 655 99999999999999887 8999999999877543 4578999999976432
Q ss_pred CccccCCCCCccchHHHHHH-HHHHHhCCCCCCCCCcchHHHHHHhhcccccccccchhhccChHHHHHHHHHHHHHHHc
Q 006559 506 NNYSQRKFWQRCDVYSFGVV-LLEILTGKMAKGDGELGIVKWVQMMGQDESAWEVFDFELIMDKEMEEEMRALLQVALLC 584 (640)
Q Consensus 506 ~~~~~~~~~~k~DV~SfGvv-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~C 584 (640)
.+.++||||++++ .+++++|..||.. ..|........ ....................++.+++.+|
T Consensus 253 -------~~~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~dli~~~ 319 (336)
T 2vuw_A 253 -------GDYQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDKM-LKQMTFKTKCNTPAMKQIKRKIQEFHRTM 319 (336)
T ss_dssp -------SSHHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHHH-HHTCCCSSCCCSHHHHHHHHHHHHHHHHG
T ss_pred -------CccceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHhh-hhhhccCcccchhhhhhcCHHHHHHHHHH
Confidence 2578999998777 7788899999842 22322111100 00000000001122234556678888899
Q ss_pred cCCCCCCCCCHHHHH
Q 006559 585 LAPLPKDRPNMSIVH 599 (640)
Q Consensus 585 l~~~P~~RPs~~~v~ 599 (640)
|+.| |+.|++
T Consensus 320 L~~d-----sa~e~l 329 (336)
T 2vuw_A 320 LNFS-----SATDLL 329 (336)
T ss_dssp GGSS-----SHHHHH
T ss_pred hccC-----CHHHHH
Confidence 9976 888776
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=4.4e-28 Score=269.22 Aligned_cols=176 Identities=17% Similarity=0.067 Sum_probs=123.9
Q ss_pred cccccCcceEEEEE-eCCCcEEEEEEeccc------------cchHHHHHHHHHHhcc-CCCcccceeEEEEcCCeEEEE
Q 006559 340 LLGKGCVGATYKVV-LDGGDVVVVKRIRER------------KKKREVDEWLRVIGGL-RHSNIVSIRAYCNGKDELFLV 405 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~-~~~~~~vavK~l~~~------------~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV 405 (640)
..+.|++|.++.++ .--|+.++||.+... ...+++.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 46677777766654 345888999998643 1235688999999999 699999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCccccc
Q 006559 406 YDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLF 485 (640)
Q Consensus 406 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~ 485 (640)
|||++||+|.++|.... +++.. +|+.||+.||+|+|+ .+||||||||+|||++++|.+||+|||+++..
T Consensus 321 MEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999998653 45543 488999999999995 45999999999999999999999999999876
Q ss_pred CCC------ccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCC
Q 006559 486 HTP------FFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534 (640)
Q Consensus 486 ~~~------~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~ 534 (640)
... .++|+.|+|||++.+ .+..++|+||+|++++++.++..
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g--------~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAE--------NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC-------------------------CCCCTTHH
T ss_pred CCCCccccCceechhhccHHHhCC--------CCCCcccccccccchhhhccccc
Confidence 432 346889999997532 34567999999999888766543
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=6.1e-27 Score=241.56 Aligned_cols=188 Identities=30% Similarity=0.526 Sum_probs=168.0
Q ss_pred CChhhHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCceEecCCC--CcEEEEEeCCCCCCC---CchhccCCCCCCEE
Q 006559 22 SPYSDISTLLSFKASVTGSSDSLSSWVNSTDPCFDSWRGVTCNPST--HRVIKLVLEDLDLTG---PAEVLSRLTQLRLL 96 (640)
Q Consensus 22 ~~~~~~~~ll~~k~~~~~~~~~~~sW~~~~~~c~~~w~gv~C~~~~--~~v~~l~l~~~~l~g---~~~~l~~l~~L~~L 96 (640)
+...|.+||++||+++.++. .+.+|+.+.+||.+.|.||+|+..+ ++|+.|+|.++.++| .++.+.++++|++|
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 45689999999999996554 5678976677774459999998765 799999999999998 34789999999999
Q ss_pred eCCC-CcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCc
Q 006559 97 SLKN-NLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNR 174 (640)
Q Consensus 97 ~Ls~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~ 174 (640)
+|++ |.+.+..| .+..+++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+| ..+..+++|++|+|++|+
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP-PSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCC-GGGGGCTTCCEEECCSSC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCC-hHHhcCCCCCeEECcCCc
Confidence 9995 99987655 79999999999999999999999999999999999999999999898 789999999999999999
Q ss_pred ceecccCCcCCCC-CCcEEEcccCcCcccCCcccCCCC
Q 006559 175 FTGTLYSVNSSSR-SILDFNVSNNQLSGQIPAWMSPFG 211 (640)
Q Consensus 175 l~g~~~~~~~~~~-~L~~l~ls~N~l~g~ip~~~~~~~ 211 (640)
++|.+|..+..+. +|+.|++++|+++|.+|..+..+.
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc
Confidence 9999999998888 999999999999999998876553
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.3e-25 Score=247.97 Aligned_cols=175 Identities=15% Similarity=0.181 Sum_probs=137.2
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEecccc----------chHHHHHHHHHHhccCCCcccceeEEEEcCCeEEEEEe
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERK----------KKREVDEWLRVIGGLRHSNIVSIRAYCNGKDELFLVYD 407 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 407 (640)
.++||+|+||.||+|... +..+++|+...+. ..+.+.+|++++++++||||+++..++...+..|+|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999544 5778888764331 12347889999999999999977777777778899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCC
Q 006559 408 YLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHT 487 (640)
Q Consensus 408 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~ 487 (640)
|+++|+|.+++.. +..++.|+++||+|||+ .+|+||||||+|||++. .+||+|||+++....
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 9999999999874 35799999999999995 45999999999999999 999999999988754
Q ss_pred -------------CccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 006559 488 -------------PFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAK 536 (640)
Q Consensus 488 -------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~ 536 (640)
...+|..|+|||++.. ....|+.++|+||..+-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~-----~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWER-----FLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHH-----HHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHH-----HHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2345889999997632 1234667889999999988888877665
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=2.4e-23 Score=240.76 Aligned_cols=177 Identities=28% Similarity=0.376 Sum_probs=110.5
Q ss_pred CCChhhHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCceEecCCCCcEEEEEeCCCCCCCC----chhccC-------
Q 006559 21 NSPYSDISTLLSFKASVTGSSDSLSSWVNSTDPCFDSWRGVTCNPSTHRVIKLVLEDLDLTGP----AEVLSR------- 89 (640)
Q Consensus 21 ~~~~~~~~~ll~~k~~~~~~~~~~~sW~~~~~~c~~~w~gv~C~~~~~~v~~l~l~~~~l~g~----~~~l~~------- 89 (640)
+....|++||++||+++.++. .+++|+.++||| +|.||+|+ +++|+.|+|++.++.|. .+.+.+
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C--~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPC--TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGG--GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCc--CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 345789999999999997666 778997566655 89999999 58999999999999885 233444
Q ss_pred ----------------CCCCCEEeCCCCcCCCCCC---CCCCCCCCcEEEcccccccccCCccC-CCCCCCCEEEcccCC
Q 006559 90 ----------------LTQLRLLSLKNNLLSSSNL---NLSSWPHLKHLYLSHNRFTGTFPSGV-SSLRHLRRVDLSHNA 149 (640)
Q Consensus 90 ----------------l~~L~~L~Ls~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~ 149 (640)
+++|++|+|++|.++|..+ .++++++|++|+|++|.+++.+|..+ .++++|++|||++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4555555555555544222 34445555555555555554444433 445555555555555
Q ss_pred CCCCCCchh---cCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCc
Q 006559 150 YEGEIPMTE---LTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 150 l~g~~p~~~---~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
+++..| .. +.++++|++|+|++|.+++.++. ..+++|+.|++++|++++.+|.
T Consensus 163 l~~~~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~ 218 (768)
T 3rgz_A 163 ISGANV-VGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF 218 (768)
T ss_dssp CEEETH-HHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB
T ss_pred cCCcCC-hhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc
Confidence 554433 22 44555555555555555554443 4466677777777777766665
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=2.5e-23 Score=240.33 Aligned_cols=181 Identities=23% Similarity=0.349 Sum_probs=153.3
Q ss_pred hhhHHHHHHhhhcCCCCCCCCCCCCCCC-----CCCCCCC------------CceEecCCCCcEEEEEeCCCCCCCCc-h
Q 006559 24 YSDISTLLSFKASVTGSSDSLSSWVNST-----DPCFDSW------------RGVTCNPSTHRVIKLVLEDLDLTGPA-E 85 (640)
Q Consensus 24 ~~~~~~ll~~k~~~~~~~~~~~sW~~~~-----~~c~~~w------------~gv~C~~~~~~v~~l~l~~~~l~g~~-~ 85 (640)
..|..||++||+++.++ +|+.+. +||+|+| .||+|+. .+||+.|+|++++++|.. +
T Consensus 268 ~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 268 IKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred hHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 56999999999999654 675443 5655699 9999987 489999999999999875 7
Q ss_pred hccCCCCCCEEeC-CCCcCCCC----------------------------------------------------------
Q 006559 86 VLSRLTQLRLLSL-KNNLLSSS---------------------------------------------------------- 106 (640)
Q Consensus 86 ~l~~l~~L~~L~L-s~N~l~~~---------------------------------------------------------- 106 (640)
.+++|++|+.|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 8999999999999 88865432
Q ss_pred -------------------CCCCCCCCCCcEEEcccccccc-----------------cCCccCC--CCCCCCEEEcccC
Q 006559 107 -------------------NLNLSSWPHLKHLYLSHNRFTG-----------------TFPSGVS--SLRHLRRVDLSHN 148 (640)
Q Consensus 107 -------------------~~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~Ls~N 148 (640)
|..++++++|++|+|++|.|+| .+|..++ ++++|+.|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 2357788999999999999999 4999988 9999999999999
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCc-cee-cccCCcCC-------CCCCcEEEcccCcCcccCCc--ccCCCCC
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNR-FTG-TLYSVNSS-------SRSILDFNVSNNQLSGQIPA--WMSPFGG 212 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~-l~g-~~~~~~~~-------~~~L~~l~ls~N~l~g~ip~--~~~~~~~ 212 (640)
++.|.+| ..+.++++|+.|+|++|+ |+| .+|..+.. +++|+.|+|++|+|+ .+|. .+..+..
T Consensus 502 ~l~~~iP-~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 502 PNMTQLP-DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp TTCCSCC-GGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred CCCccCh-HHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 9999999 789999999999999998 998 78865544 449999999999999 8888 6765543
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=6.6e-23 Score=231.88 Aligned_cols=184 Identities=21% Similarity=0.334 Sum_probs=155.7
Q ss_pred hhhHHHHHHhhhcCCCCCCC--------CCCCCCCCCCCCCCC---CceEecCCCCcEEEEEeCCCCCCCCc-hhccCCC
Q 006559 24 YSDISTLLSFKASVTGSSDS--------LSSWVNSTDPCFDSW---RGVTCNPSTHRVIKLVLEDLDLTGPA-EVLSRLT 91 (640)
Q Consensus 24 ~~~~~~ll~~k~~~~~~~~~--------~~sW~~~~~~c~~~w---~gv~C~~~~~~v~~l~l~~~~l~g~~-~~l~~l~ 91 (640)
..|+.||.+++.++.++.+. ..+|+.+.++| .| .||+|+.. +||+.|+|++++++|.. +.+++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c--~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD--MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG--GTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc--cccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 46899999999998654332 23797666665 89 99999876 89999999999999865 7899999
Q ss_pred CCCEEeCCCCcC--------------------------------------------------------------------
Q 006559 92 QLRLLSLKNNLL-------------------------------------------------------------------- 103 (640)
Q Consensus 92 ~L~~L~Ls~N~l-------------------------------------------------------------------- 103 (640)
+|+.|+|++|.+
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 999999999954
Q ss_pred ----------CCCCCCCCCCCCCcEEEccccccccc-----------------CCccCC--CCCCCCEEEcccCCCCCCC
Q 006559 104 ----------SSSNLNLSSWPHLKHLYLSHNRFTGT-----------------FPSGVS--SLRHLRRVDLSHNAYEGEI 154 (640)
Q Consensus 104 ----------~~~~~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~ 154 (640)
++.|..++++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++.|.+
T Consensus 186 l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 186 TQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 23334578899999999999999996 999999 9999999999999999999
Q ss_pred CchhcCCCCCCcEEEccCCc-cee-cccCCcCCC------CCCcEEEcccCcCcccCCc--ccCCCCC
Q 006559 155 PMTELTRLPNLLTLRLEDNR-FTG-TLYSVNSSS------RSILDFNVSNNQLSGQIPA--WMSPFGG 212 (640)
Q Consensus 155 p~~~~~~l~~L~~L~L~~N~-l~g-~~~~~~~~~------~~L~~l~ls~N~l~g~ip~--~~~~~~~ 212 (640)
| ..++++++|++|+|++|+ ++| .+|..+..+ ++|+.|++++|+++ .+|. .+..+..
T Consensus 266 p-~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~ 331 (636)
T 4eco_A 266 P-TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKK 331 (636)
T ss_dssp C-TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTT
T ss_pred h-HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCC
Confidence 9 789999999999999998 999 888877665 89999999999999 8888 6765543
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=1.3e-21 Score=198.19 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=111.1
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEecccc--------------------chHHHHHHHHHHhccCCCcccceeEEEE
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERK--------------------KKREVDEWLRVIGGLRHSNIVSIRAYCN 397 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~--------------------~~~~~~~e~~~l~~l~H~niv~l~~~~~ 397 (640)
.+.||+|+||.||+|+..+|+.||||.++... ....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 37899999999999999779999999996431 2345788999999998 5 66666554
Q ss_pred cCCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEc
Q 006559 398 GKDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACIS 477 (640)
Q Consensus 398 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~ 477 (640)
. +..|+||||+++|+|.+ +... ....++.|++.||+|||+ .+|+||||||+|||++ ++.+||+
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~~-----------~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRVE-----------NPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCCS-----------CHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEEC
T ss_pred c-cceEEEEEecCCCcHHH-cchh-----------hHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEE
Confidence 3 55699999999999998 5321 234699999999999995 4599999999999999 9999999
Q ss_pred cCCcccccCCCccccccccCCccc
Q 006559 478 DIGVHQLFHTPFFINDAYNAPELK 501 (640)
Q Consensus 478 DfGl~~~~~~~~~~~~~y~aPE~~ 501 (640)
|||+++.. ..++|||++
T Consensus 235 DFG~a~~~-------~~~~a~e~l 251 (282)
T 1zar_A 235 DFPQSVEV-------GEEGWREIL 251 (282)
T ss_dssp CCTTCEET-------TSTTHHHHH
T ss_pred ECCCCeEC-------CCCCHHHHH
Confidence 99999754 346788864
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.84 E-value=1.9e-21 Score=224.78 Aligned_cols=120 Identities=33% Similarity=0.550 Sum_probs=110.2
Q ss_pred CCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCc
Q 006559 111 SSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSIL 190 (640)
Q Consensus 111 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~ 190 (640)
..+++|+.|||++|+|+|.+|..|+++++|+.|+|++|+++|.+| ..++++++|+.|||++|+++|.+|..+..+++|+
T Consensus 629 ~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip-~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP-DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp SSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC-GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC-hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 345778999999999999999999999999999999999999999 7899999999999999999999999999999999
Q ss_pred EEEcccCcCcccCCcc--cCCCCCCCCCCCcccCCCCCCCCCCC
Q 006559 191 DFNVSNNQLSGQIPAW--MSPFGGSSFAGNKNLCGRPLPSDCSN 232 (640)
Q Consensus 191 ~l~ls~N~l~g~ip~~--~~~~~~~~~~gn~~lcg~~~~~~c~~ 232 (640)
.|||++|+|+|.||.. +.++...+|.||+++||.|++ .|..
T Consensus 708 ~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred EEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 9999999999999974 677888899999999999987 5854
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=1.5e-21 Score=202.48 Aligned_cols=184 Identities=19% Similarity=0.259 Sum_probs=151.4
Q ss_pred CChhhHHHHHHhhhcCC-CCCCCCCCCC----CCCCCCCCCCCceEecC--------CCCcEEEEEeCCCCCCCCchhcc
Q 006559 22 SPYSDISTLLSFKASVT-GSSDSLSSWV----NSTDPCFDSWRGVTCNP--------STHRVIKLVLEDLDLTGPAEVLS 88 (640)
Q Consensus 22 ~~~~~~~~ll~~k~~~~-~~~~~~~sW~----~~~~~c~~~w~gv~C~~--------~~~~v~~l~l~~~~l~g~~~~l~ 88 (640)
...+|..+|++||..+. ++.....+|. ...++| .|.|+.|+. ...+|+.|+|+++.++..++.+.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~~lp~~l~ 101 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLPQFPDQAF 101 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCSSCCSCGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCchhcChhhh
Confidence 34678999999999883 4433345783 233344 899999952 34689999999999997777788
Q ss_pred CCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcC--------
Q 006559 89 RLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELT-------- 160 (640)
Q Consensus 89 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-------- 160 (640)
.+++|++|+|++|.++..+..+..+++|++|+|++|.|+ .+|..++++++|++|+|++|++.+.+| ..+.
T Consensus 102 ~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p-~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELP-EPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCC-SCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccC-hhHhhccchhhh
Confidence 899999999999999966667999999999999999999 789999999999999999999999998 4444
Q ss_pred -CCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC
Q 006559 161 -RLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG 211 (640)
Q Consensus 161 -~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~ 211 (640)
++++|++|+|++|+++ .+|..+..+++|+.|+|++|++++ +|..+..++
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~ 229 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLP 229 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCT
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCC
Confidence 4899999999999998 778888889999999999999986 555555443
No 260
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=6.8e-19 Score=169.86 Aligned_cols=152 Identities=24% Similarity=0.262 Sum_probs=128.5
Q ss_pred CCCCCCCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCCC-CCCCCCCcEEE
Q 006559 52 DPCFDSWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNLN-LSSWPHLKHLY 120 (640)
Q Consensus 52 ~~c~~~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~ 120 (640)
+.|.|+|++|.|... ..+++.|+|+++.+++.. ..+..+++|+.|+|++|.+++.++. +..+++|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 356679999999753 236888999999998765 4578999999999999999987664 68899999999
Q ss_pred cccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCc
Q 006559 121 LSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLS 200 (640)
Q Consensus 121 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 200 (640)
|++|.+++..+..|.++++|+.|+|++|++++ +|...+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcc-cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 99999997777778999999999999999985 45466888999999999999999877777888899999999999887
Q ss_pred ccCC
Q 006559 201 GQIP 204 (640)
Q Consensus 201 g~ip 204 (640)
+..|
T Consensus 162 ~~~~ 165 (208)
T 2o6s_A 162 CTCP 165 (208)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 7666
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=9.8e-19 Score=171.49 Aligned_cols=154 Identities=23% Similarity=0.257 Sum_probs=101.3
Q ss_pred CCCCCCCCCCCCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCC
Q 006559 47 WVNSTDPCFDSWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPH 115 (640)
Q Consensus 47 W~~~~~~c~~~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~ 115 (640)
|+.+...| +|++|.|... ...+..|+|+++.+++.. ..+..+++|+.|+|++|.|+..++ .+..+++
T Consensus 12 ~~~~~~~C--s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 12 ACPSQCSC--SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp CCCTTCEE--ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCCCCEE--eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 33344444 8999999753 124566677777766653 456667777777777777766554 3566777
Q ss_pred CcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcc
Q 006559 116 LKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVS 195 (640)
Q Consensus 116 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls 195 (640)
|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+| ..+..+++|++|+|++|+|++..+..+..+++|+.|+|+
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 167 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELP-RGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLF 167 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCC-TTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccC-cccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 777777777776655555666777777777777776 566 456666777777777777776555566666777777777
Q ss_pred cCcCcccCC
Q 006559 196 NNQLSGQIP 204 (640)
Q Consensus 196 ~N~l~g~ip 204 (640)
+|.+++..+
T Consensus 168 ~N~~~c~c~ 176 (229)
T 3e6j_A 168 GNPWDCECR 176 (229)
T ss_dssp TSCBCTTBG
T ss_pred CCCccCCcc
Confidence 777665544
No 262
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.78 E-value=2e-18 Score=171.75 Aligned_cols=153 Identities=23% Similarity=0.282 Sum_probs=122.4
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
.+..|+|.++.+++.. ..+..+++|+.|+|++|.|++.++ .+..+++|++|+|++|.|++..|..|.++++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 5677888888888765 468889999999999999988766 47888999999999999988777788889999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCcccC
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNLC 222 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~lc 222 (640)
+|++++ +|...+..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++..|..+..+. ...+.+|+..|
T Consensus 116 ~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 116 GNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp SSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCcCCC-cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 999985 5546678889999999999999887777788888999999999999877776665443 33445555443
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=6.5e-19 Score=171.66 Aligned_cols=152 Identities=18% Similarity=0.224 Sum_probs=90.1
Q ss_pred CCCCCCCCceEecCCC---------CcEEEEEeCCCCCCCCc--hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEE
Q 006559 52 DPCFDSWRGVTCNPST---------HRVIKLVLEDLDLTGPA--EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHL 119 (640)
Q Consensus 52 ~~c~~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~--~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L 119 (640)
+.|.|.|+.+.|.... ..+..|+|++|.+++.. ..+..+++|+.|+|++|.|++.++ .+..+++|++|
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 3465678877776421 23445666666665542 335566666666666666665544 45666666666
Q ss_pred EcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcC
Q 006559 120 YLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQL 199 (640)
Q Consensus 120 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l 199 (640)
+|++|.|++..|..|.++++|+.|+|++|++++..| ..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|.|
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGN-DSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCT-TSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECH-hHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 666666665555556666666666666666665434 4556666666666666666665566666666666666666666
Q ss_pred cccCC
Q 006559 200 SGQIP 204 (640)
Q Consensus 200 ~g~ip 204 (640)
++..+
T Consensus 166 ~c~c~ 170 (220)
T 2v70_A 166 NCNCY 170 (220)
T ss_dssp ECSGG
T ss_pred cCCCc
Confidence 55443
No 264
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=3.2e-18 Score=166.72 Aligned_cols=156 Identities=22% Similarity=0.274 Sum_probs=110.2
Q ss_pred CCCCCCCCceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccC
Q 006559 52 DPCFDSWRGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTF 130 (640)
Q Consensus 52 ~~c~~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~ 130 (640)
..|.|.|..|.|.. ++++..+..+. ++|+.|+|++|.|++.++ .+..+++|++|+|++|.+++..
T Consensus 7 ~~C~C~~~~v~c~~------------~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~ 72 (220)
T 2v9t_B 7 AACTCSNNIVDCRG------------KGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELA 72 (220)
T ss_dssp TTSEEETTEEECTT------------SCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEEC
T ss_pred CCCEECCCEEEcCC------------CCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcC
Confidence 34656788888864 33333332222 577888888888877655 5777888888888888888777
Q ss_pred CccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCC
Q 006559 131 PSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPF 210 (640)
Q Consensus 131 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~ 210 (640)
|..|.++++|+.|+|++|+++ .+|...|..+++|++|+|++|+|++..|..+..+++|+.|+|++|+|++..|..+..+
T Consensus 73 ~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 151 (220)
T 2v9t_B 73 PDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 151 (220)
T ss_dssp TTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred HHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCC
Confidence 778888888888888888887 4564667778888888888888887777777778888888888888887666655544
Q ss_pred CC---CCCCCCcccC
Q 006559 211 GG---SSFAGNKNLC 222 (640)
Q Consensus 211 ~~---~~~~gn~~lc 222 (640)
.. ..+.+|+..|
T Consensus 152 ~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 152 RAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred CCCCEEEeCCCCcCC
Confidence 32 3445665554
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=7.6e-18 Score=160.40 Aligned_cols=158 Identities=23% Similarity=0.352 Sum_probs=126.2
Q ss_pred CCCCCCCceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCC--CCCCCCCcEEEcccccccccC
Q 006559 53 PCFDSWRGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLN--LSSWPHLKHLYLSHNRFTGTF 130 (640)
Q Consensus 53 ~c~~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~g~~ 130 (640)
.|.|.|+.+.|. +++++..+..+. .+|+.|+|++|.|++.++. +..+++|++|+|++|.|++..
T Consensus 5 ~C~C~~~~l~~s------------~~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 70 (192)
T 1w8a_A 5 MCHCEGTTVDCT------------GRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIE 70 (192)
T ss_dssp TSEEETTEEECT------------TSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBC
T ss_pred CCEECCCEEEcC------------CCCcCcCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcC
Confidence 455567666664 445554443332 3899999999999988764 889999999999999999999
Q ss_pred CccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCc-ccCC
Q 006559 131 PSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPA-WMSP 209 (640)
Q Consensus 131 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~-~~~~ 209 (640)
|..|.++++|+.|+|++|++++..| ..|..+++|++|+|++|+|++.+|..+..+++|+.|+|++|.|++..+- |+..
T Consensus 71 ~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~ 149 (192)
T 1w8a_A 71 PNAFEGASHIQELQLGENKIKEISN-KMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE 149 (192)
T ss_dssp TTTTTTCTTCCEEECCSCCCCEECS-SSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHH
T ss_pred HhHcCCcccCCEEECCCCcCCccCH-HHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHH
Confidence 9999999999999999999997555 7789999999999999999999999999999999999999999998763 2211
Q ss_pred -CCCCCCCCCcccCCCC
Q 006559 210 -FGGSSFAGNKNLCGRP 225 (640)
Q Consensus 210 -~~~~~~~gn~~lcg~~ 225 (640)
+....+.++...|+.|
T Consensus 150 ~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 150 WLRKKSLNGGAARCGAP 166 (192)
T ss_dssp HHHHHCCSGGGCBBCSS
T ss_pred HHHHcCCCCCCCCCCCC
Confidence 1112334555567665
No 266
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.6e-18 Score=173.11 Aligned_cols=132 Identities=15% Similarity=0.142 Sum_probs=101.9
Q ss_pred hccccccCcceEEEEEe-CCCcE--EEEEEecccc-c-------------------------hHHHHHHHHHHhccCCCc
Q 006559 338 AELLGKGCVGATYKVVL-DGGDV--VVVKRIRERK-K-------------------------KREVDEWLRVIGGLRHSN 388 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~-~~~~~--vavK~l~~~~-~-------------------------~~~~~~e~~~l~~l~H~n 388 (640)
.+.||+|+||.||+|.. .+|.. ||||.++... . ...+.+|++.+.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999999997 67888 9999875431 0 125678899999999886
Q ss_pred c--cceeEEEEcCCeEEEEEeccCC-C----CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhh-cCCCCCceecC
Q 006559 389 I--VSIRAYCNGKDELFLVYDYLPH-G----SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLH-GYNKAHLFHGH 460 (640)
Q Consensus 389 i--v~l~~~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrd 460 (640)
+ ...+++ +..+|||||+.+ | +|.++... .++.....++.|++.||.||| +.+ |+|||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 5 333332 356899999942 4 67766432 123356789999999999999 654 99999
Q ss_pred CCCCCeEECCCCCeEEccCCcccccC
Q 006559 461 LSSSNIVVDQLGNACISDIGVHQLFH 486 (640)
Q Consensus 461 lk~~NILl~~~~~~kl~DfGl~~~~~ 486 (640)
|||+|||++. .++|+|||++....
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999998 99999999997653
No 267
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.75 E-value=1.4e-18 Score=178.92 Aligned_cols=159 Identities=28% Similarity=0.409 Sum_probs=112.5
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCC-CCc-----------------------EEEcc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWP-HLK-----------------------HLYLS 122 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~-~L~-----------------------~L~Ls 122 (640)
++..|+|++|.+++.. ..+..+++|++|+|++|.+++..+ .+..++ +|+ .|+|+
T Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls 205 (313)
T 1ogq_A 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLS 205 (313)
T ss_dssp TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECC
T ss_pred CCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECc
Confidence 5666777777666533 456666666666666666664322 344444 444 45555
Q ss_pred cccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 123 HNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 123 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
+|.+++.+|..|.++++|+.|+|++|.+++.+| . +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+|+|.
T Consensus 206 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp SSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred CCcccCcCCHHHhcCCCCCEEECCCCceeeecC-c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 555555555566667777777777777776555 2 67788888888888999888888888899999999999999999
Q ss_pred CCcc--cCCCCCCCCCCCcccCCCCCCCCC
Q 006559 203 IPAW--MSPFGGSSFAGNKNLCGRPLPSDC 230 (640)
Q Consensus 203 ip~~--~~~~~~~~~~gn~~lcg~~~~~~c 230 (640)
+|.. +..+....+.+|+.+||.|++. |
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~~p~~~-C 312 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCGSPLPA-C 312 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEESTTSSC-C
T ss_pred CCCCccccccChHHhcCCCCccCCCCCC-C
Confidence 9875 3345566788999999988774 6
No 268
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=4.3e-17 Score=152.97 Aligned_cols=138 Identities=21% Similarity=0.246 Sum_probs=116.7
Q ss_pred CCCCCCCCceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccC
Q 006559 52 DPCFDSWRGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTF 130 (640)
Q Consensus 52 ~~c~~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~ 130 (640)
+.|.|+|++|.|... +++..+. ...++|+.|+|++|.+++.++ .+..+++|++|+|++|.|++..
T Consensus 3 ~~C~C~~~~l~~~~~------------~l~~~p~--~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK------------GLTSVPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68 (177)
T ss_dssp TTCEEETTEEECCSS------------CCSSCCT--TCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCCEeCCCEEEecCC------------CCccCCC--CCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeC
Confidence 356679999999753 3333222 224789999999999998776 4789999999999999999877
Q ss_pred CccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 131 PSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 131 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
+..|.++++|+.|+|++|++++ +|...+..+++|++|+|++|+|++..+..+..+++|+.|+|++|.+++..|
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhHccCCCccCEEECCCCCccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7778999999999999999996 454678899999999999999998777777889999999999999998876
No 269
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.72 E-value=1.3e-16 Score=160.64 Aligned_cols=153 Identities=24% Similarity=0.262 Sum_probs=131.9
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCC-CCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLN-LSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
.++..|+|+++.+++. +.+..+++|++|+|++|.+++.++. +..+++|++|+|++|++++..|..|.++++|+.|+|+
T Consensus 63 ~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 141 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141 (272)
T ss_dssp TTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECC
Confidence 4688999999999885 5789999999999999999988764 7899999999999999998888889999999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCC---CCCCCCcccC
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGG---SSFAGNKNLC 222 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~---~~~~gn~~lc 222 (640)
+|++++ +|...+..+++|+.|+|++|++++..+..+..+++|+.|++++|+|++..|..+..+.. ..+.+|+..|
T Consensus 142 ~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 142 HNQLQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp SSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccCc-cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 999996 45467889999999999999999888888888999999999999999988876655443 3445665544
No 270
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=9.6e-17 Score=161.42 Aligned_cols=139 Identities=24% Similarity=0.278 Sum_probs=91.9
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCCC-CCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNLN-LSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
.+..|+|+++.+++.. ..+..+++|++|+|++|.++..++. +..+++|++|+|++|.+++..+..|.++++|+.|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 3556666666666544 3566777777777777777665553 4667777777777777776555566777777777777
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
+|++++. |...+..+++|++|+|++|.+++..+..+..+++|+.|+|++|++++..|..+.
T Consensus 118 ~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 178 (270)
T 2o6q_A 118 RNQLKSL-PPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFD 178 (270)
T ss_dssp SSCCCCC-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CCccCee-CHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhc
Confidence 7777643 335566777777777777777766555566667777777777777665554443
No 271
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.71 E-value=8.9e-17 Score=156.46 Aligned_cols=135 Identities=22% Similarity=0.196 Sum_probs=122.1
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
..++.|+|++|.+++.. ..+..+++|+.|+|++|.+++..+ .+..+++|++|+|++|.|+...+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 46899999999998765 478999999999999999998755 7999999999999999999766667899999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQI 203 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~i 203 (640)
++|++++..| ..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|.|...-
T Consensus 112 ~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 112 NANKINCLRV-DAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CSSCCCCCCT-TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCCEeCH-HHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9999997655 78999999999999999999988888999999999999999998643
No 272
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=1.2e-16 Score=155.57 Aligned_cols=156 Identities=19% Similarity=0.215 Sum_probs=131.6
Q ss_pred CceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC--CCCCCCCCcEEEcccccccccCCccCCC
Q 006559 59 RGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL--NLSSWPHLKHLYLSHNRFTGTFPSGVSS 136 (640)
Q Consensus 59 ~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 136 (640)
.+-+|.. ..++++++.++..+..+ ...++.|+|++|.|++.++ .+..+++|++|+|++|.|++..|..|.+
T Consensus 7 ~~C~C~~-----~~l~~s~n~l~~iP~~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~ 79 (220)
T 2v70_A 7 EKCRCEG-----TTVDCSNQKLNKIPEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEG 79 (220)
T ss_dssp TTCEEET-----TEEECCSSCCSSCCSCC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTT
T ss_pred CCCEECC-----CEeEeCCCCcccCccCC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCC
Confidence 4556753 26889999998766544 3457899999999998754 3889999999999999999988889999
Q ss_pred CCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCC---C
Q 006559 137 LRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGG---S 213 (640)
Q Consensus 137 l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~---~ 213 (640)
+++|+.|+|++|++++ +|...|..+++|++|+|++|+|++..|..+..+++|+.|+|++|+|++..|..+..+.. .
T Consensus 80 l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 158 (220)
T 2v70_A 80 ASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTL 158 (220)
T ss_dssp CTTCCEEECCSSCCCC-CCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCc-cCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEE
Confidence 9999999999999996 45477999999999999999999999999999999999999999999998988776543 3
Q ss_pred CCCCCcccC
Q 006559 214 SFAGNKNLC 222 (640)
Q Consensus 214 ~~~gn~~lc 222 (640)
.+.+|+..|
T Consensus 159 ~L~~N~l~c 167 (220)
T 2v70_A 159 NLLANPFNC 167 (220)
T ss_dssp ECCSCCEEC
T ss_pred EecCcCCcC
Confidence 445665544
No 273
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.71 E-value=1.4e-17 Score=174.85 Aligned_cols=171 Identities=20% Similarity=0.182 Sum_probs=139.3
Q ss_pred CCCCCCCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhcc-CCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEE
Q 006559 52 DPCFDSWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLS-RLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHL 119 (640)
Q Consensus 52 ~~c~~~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~-~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L 119 (640)
..|.|.+..|.|... ...+..|+|++|.+++.. ..+. .+++|+.|+|++|.|++.++ .+..+++|++|
T Consensus 14 ~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 14 ANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 346678899999652 234778999999998865 4465 89999999999999998776 58999999999
Q ss_pred EcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCc---CCCCCCcEEEccc
Q 006559 120 YLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVN---SSSRSILDFNVSN 196 (640)
Q Consensus 120 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~---~~~~~L~~l~ls~ 196 (640)
+|++|+|++..+..|.++++|+.|+|++|++++..| ..|..+++|+.|+|++|+|++..+..+ ..+++|+.|+|++
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDR-NAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCS
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECH-HHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCC
Confidence 999999998888889999999999999999996555 789999999999999999998666555 5689999999999
Q ss_pred CcCcccCCcccCCCC-----CCCCCCCcccCC
Q 006559 197 NQLSGQIPAWMSPFG-----GSSFAGNKNLCG 223 (640)
Q Consensus 197 N~l~g~ip~~~~~~~-----~~~~~gn~~lcg 223 (640)
|+|++..+..+..++ ...+.+|+..|.
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 999965544554443 345677777664
No 274
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.69 E-value=1.2e-16 Score=158.96 Aligned_cols=135 Identities=25% Similarity=0.315 Sum_probs=122.9
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|++|.+++.. ..+..+++|+.|+|++|.|++.++ .+..+++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 47899999999999865 558999999999999999998876 5789999999999999999877778899999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQI 203 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~i 203 (640)
++|++++ +|...+..+++|++|+|++|+|++..+..+..+++|+.|+|++|.|++..
T Consensus 139 s~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 139 NTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred cCCcCCc-cCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 9999995 55467999999999999999999988888999999999999999999873
No 275
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=3e-16 Score=159.47 Aligned_cols=131 Identities=24% Similarity=0.299 Sum_probs=75.3
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.+..|+|++|.+++.. ..+..+++|+.|+|++|.|++.++. ..+++|++|+|++|.|+ .+|..+.++++|+.|+|++
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~ 109 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC
Confidence 5666777777766543 4566666666666666666554322 45555666666666555 4555555555666666666
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
|++++ +|+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.
T Consensus 110 N~l~~-l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 163 (290)
T 1p9a_G 110 NRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (290)
T ss_dssp SCCCC-CCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CcCcc-cCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCcc
Confidence 66553 3324455555566666666655555555555555555555555555533
No 276
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.68 E-value=6.6e-16 Score=155.28 Aligned_cols=154 Identities=21% Similarity=0.254 Sum_probs=132.0
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|+++.++... ..+..+++|++|+|++|.+++.++ .+..+++|++|+|++|.+++..|..|.++++|+.|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 46889999999998765 456899999999999999998876 5789999999999999999988888999999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCcccC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNLC 222 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~lc 222 (640)
++|.+++ +|...+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|++..+..+..+. ...+.+|+..|
T Consensus 141 s~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 141 GYNELQS-LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCcCCc-cCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 9999995 5646789999999999999999998888888899999999999999976665555443 33455665544
No 277
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.67 E-value=8.9e-16 Score=150.35 Aligned_cols=156 Identities=21% Similarity=0.218 Sum_probs=127.3
Q ss_pred CCceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCC
Q 006559 58 WRGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSS 136 (640)
Q Consensus 58 w~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 136 (640)
|..-.|.. ..++..+++++..+..+ .++|+.|+|++|.|++.++ .+..+++|++|+|++|+|++..+..|.+
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~~ip~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 86 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHASVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDS 86 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcCccCCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhccc
Confidence 55666753 24778888887765433 3899999999999999865 6899999999999999998766677899
Q ss_pred CCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCC---C
Q 006559 137 LRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGG---S 213 (640)
Q Consensus 137 l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~---~ 213 (640)
+++|+.|+|++|++++ +|...|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+.. .
T Consensus 87 l~~L~~L~Ls~N~l~~-l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 87 LTQLTVLDLGTNQLTV-LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp CTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCEEECCCCcCCc-cChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 9999999999999995 55477899999999999999999 67888889999999999999999776665654433 3
Q ss_pred CCCCCcccC
Q 006559 214 SFAGNKNLC 222 (640)
Q Consensus 214 ~~~gn~~lc 222 (640)
.+.+|+..|
T Consensus 165 ~l~~N~~~c 173 (229)
T 3e6j_A 165 YLFGNPWDC 173 (229)
T ss_dssp ECTTSCBCT
T ss_pred EeeCCCccC
Confidence 445665444
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.67 E-value=1.6e-16 Score=162.83 Aligned_cols=158 Identities=23% Similarity=0.277 Sum_probs=110.9
Q ss_pred CCCCCCCCceEecCCC---------CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCC---CCCCCCCCCCcE
Q 006559 52 DPCFDSWRGVTCNPST---------HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSS---NLNLSSWPHLKH 118 (640)
Q Consensus 52 ~~c~~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~---~~~~~~l~~L~~ 118 (640)
+.|.|.|++|.|+... ..++.|+|+++.++..+ ..+..+++|+.|+|++|.++.. +..+..+++|++
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 3566799999997532 47899999999998765 4578999999999999998754 224455677777
Q ss_pred EEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCc
Q 006559 119 LYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQ 198 (640)
Q Consensus 119 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~ 198 (640)
|+|++|.+++ +|..+.++++|+.|+|++|++++..+...+..+++|++|+|++|.+++..+..+..+++|+.|++++|.
T Consensus 83 L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 7777777763 555566777777777777777643332456666777777777777776666666666777777777777
Q ss_pred Ccc-cCCcccCCC
Q 006559 199 LSG-QIPAWMSPF 210 (640)
Q Consensus 199 l~g-~ip~~~~~~ 210 (640)
+++ .+|..+..+
T Consensus 162 l~~~~~~~~~~~l 174 (306)
T 2z66_A 162 FQENFLPDIFTEL 174 (306)
T ss_dssp EGGGEECSCCTTC
T ss_pred cccccchhHHhhC
Confidence 765 455555443
No 279
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.66 E-value=8.7e-16 Score=154.57 Aligned_cols=137 Identities=25% Similarity=0.296 Sum_probs=124.0
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCCC-CCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNLN-LSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|+++.+++.. ..+..+++|+.|+|++|.+++.++. +..+++|++|+|++|.+++..|..+.++++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 47899999999999866 4579999999999999999988774 789999999999999999888888899999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCc
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
++|++++ +|...+..+++|++|+|++|++++.++..+..+++|+.|++++|.+.|..|.
T Consensus 165 ~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 165 SYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCcCc-cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 9999996 4447789999999999999999998888889999999999999999888773
No 280
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.66 E-value=1.4e-16 Score=164.88 Aligned_cols=142 Identities=15% Similarity=0.204 Sum_probs=122.4
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCC---------CCCCCcEEEcccccccccCCccCCCC
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLS---------SWPHLKHLYLSHNRFTGTFPSGVSSL 137 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~---------~l~~L~~L~Ls~N~l~g~~p~~~~~l 137 (640)
.++..|+|++|.++..+..+..+++|+.|+|++|.+.+..| .+. .+++|++|+|++|.|+ .+|..++++
T Consensus 127 ~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l 205 (328)
T 4fcg_A 127 AGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANL 205 (328)
T ss_dssp TTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGC
T ss_pred CCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCC
Confidence 36888999999998767789999999999999987777554 444 4899999999999998 788889999
Q ss_pred CCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCC
Q 006559 138 RHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGG 212 (640)
Q Consensus 138 ~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~ 212 (640)
++|+.|+|++|++++ +| ..+..+++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|.++..+..
T Consensus 206 ~~L~~L~L~~N~l~~-l~-~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 278 (328)
T 4fcg_A 206 QNLKSLKIRNSPLSA-LG-PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQ 278 (328)
T ss_dssp TTCCEEEEESSCCCC-CC-GGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTT
T ss_pred CCCCEEEccCCCCCc-Cc-hhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCC
Confidence 999999999999985 66 46889999999999999999999999989999999999999999999987765543
No 281
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=4.6e-16 Score=148.10 Aligned_cols=126 Identities=20% Similarity=0.182 Sum_probs=108.0
Q ss_pred eCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCC
Q 006559 75 LEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEI 154 (640)
Q Consensus 75 l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 154 (640)
+++++++..+..+ .++|+.|+|++|.|+..+..+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|++++..
T Consensus 17 ~~~~~l~~ip~~~--~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~ 94 (193)
T 2wfh_A 17 CSNKGLKVLPKGI--PRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94 (193)
T ss_dssp CTTSCCSSCCSCC--CTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred cCCCCCCcCCCCC--CCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeC
Confidence 3344555443323 35899999999999987778999999999999999999988889999999999999999999654
Q ss_pred CchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccC
Q 006559 155 PMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQI 203 (640)
Q Consensus 155 p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~i 203 (640)
| ..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|.+.+.-
T Consensus 95 ~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 95 P-RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp T-TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred H-HHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 4 78999999999999999999877778888999999999999998643
No 282
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.65 E-value=2.7e-16 Score=164.51 Aligned_cols=155 Identities=23% Similarity=0.253 Sum_probs=119.7
Q ss_pred CCCCCCceEecCC-----------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEE
Q 006559 54 CFDSWRGVTCNPS-----------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLY 120 (640)
Q Consensus 54 c~~~w~gv~C~~~-----------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~ 120 (640)
|.|.|.|+ |+.. ..++..|+|+++.+++.. ..+..+++|+.|+|++|.+++.++ .+..+++|++|+
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 33489988 7642 136778888888887755 368888888888888888887655 588888888888
Q ss_pred cccccccccCCccCCCCCCCCEEEcccCCCCCCCCc-hhcCCCCCCcEEEccCC-cceecccCCcCCCCCCcEEEcccCc
Q 006559 121 LSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPM-TELTRLPNLLTLRLEDN-RFTGTLYSVNSSSRSILDFNVSNNQ 198 (640)
Q Consensus 121 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~~l~~L~~L~L~~N-~l~g~~~~~~~~~~~L~~l~ls~N~ 198 (640)
|++|.+++..+..|.++++|++|+|++|+++ .+|. ..+..+++|++|++++| .+++..+..+..+++|+.|++++|+
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 8888888655555888888888888888888 4664 46788888888888888 4666667778888888888888888
Q ss_pred CcccCCcccCCC
Q 006559 199 LSGQIPAWMSPF 210 (640)
Q Consensus 199 l~g~ip~~~~~~ 210 (640)
+++..|..+..+
T Consensus 186 l~~~~~~~l~~l 197 (353)
T 2z80_A 186 LQSYEPKSLKSI 197 (353)
T ss_dssp CCEECTTTTTTC
T ss_pred cCccCHHHHhcc
Confidence 888777766543
No 283
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.65 E-value=2.6e-16 Score=170.49 Aligned_cols=158 Identities=17% Similarity=0.149 Sum_probs=134.8
Q ss_pred CCCCCCCceEecCCC--------CcEEEEEeCCCCCCCC-chhccCCCCCCEEeCCCCcCCCCC--CCCCCCCCCcEEEc
Q 006559 53 PCFDSWRGVTCNPST--------HRVIKLVLEDLDLTGP-AEVLSRLTQLRLLSLKNNLLSSSN--LNLSSWPHLKHLYL 121 (640)
Q Consensus 53 ~c~~~w~gv~C~~~~--------~~v~~l~l~~~~l~g~-~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~L 121 (640)
.|.|.+..|.|.... .++..|+|+++.+++. +..+.++++|++|+|++|.+.+.. ..+..+++|++|+|
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 343334447786532 4689999999999886 467999999999999999998643 36899999999999
Q ss_pred ccccccccCCccCCCCCCCCEEEcccCCCCCCCCc-hhcCCCCCCcEEEccCCcceecccCC-cCCCCCCcEEEcccCcC
Q 006559 122 SHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPM-TELTRLPNLLTLRLEDNRFTGTLYSV-NSSSRSILDFNVSNNQL 199 (640)
Q Consensus 122 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~~l~~L~~L~L~~N~l~g~~~~~-~~~~~~L~~l~ls~N~l 199 (640)
++|.+++..|..|+++++|++|+|++|++++.+|. ..+..+++|++|+|++|++++..|.. +..+++|+.|++++|++
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 166 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc
Confidence 99999999999999999999999999999986552 23889999999999999999988876 78899999999999999
Q ss_pred cccCCcccCCC
Q 006559 200 SGQIPAWMSPF 210 (640)
Q Consensus 200 ~g~ip~~~~~~ 210 (640)
++..|..+..+
T Consensus 167 ~~~~~~~l~~l 177 (455)
T 3v47_A 167 KSICEEDLLNF 177 (455)
T ss_dssp SCCCTTTSGGG
T ss_pred cccChhhhhcc
Confidence 99998877654
No 284
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.65 E-value=1.1e-15 Score=154.95 Aligned_cols=143 Identities=22% Similarity=0.232 Sum_probs=115.7
Q ss_pred CcEEEEEeCCCCCCCC-chhccCCCCCCEEeCCCCc-CCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEE
Q 006559 68 HRVIKLVLEDLDLTGP-AEVLSRLTQLRLLSLKNNL-LSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVD 144 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~-~~~l~~l~~L~~L~Ls~N~-l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 144 (640)
.++..|+|+++.+++. ...+..+++|+.|+|++|. +...++ .+..+++|++|+|++|.+++..|..+.++++|+.|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 4688888888888775 4678888889999998887 776644 678888888899988888887788888888888888
Q ss_pred cccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC
Q 006559 145 LSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG 211 (640)
Q Consensus 145 Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~ 211 (640)
|++|.+++ +|...+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|..+..++
T Consensus 136 l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 201 (285)
T 1ozn_A 136 LQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201 (285)
T ss_dssp CCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CCCCcccc-cCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcc
Confidence 88888885 4446678888888888888888877777788888888888888888888887776544
No 285
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.65 E-value=5.1e-16 Score=156.52 Aligned_cols=140 Identities=16% Similarity=0.126 Sum_probs=124.2
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
..+..|+|+++.+++.. ..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|.+++..|..|.++++|+.|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35889999999998765 478999999999999999998766 6899999999999999999988899999999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceec-ccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGT-LYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~-~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
++|.+++..+ ..+..+++|++|+|++|++++. +|..+..+++|+.|++++|++++..+..+.
T Consensus 108 ~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 170 (276)
T 2z62_A 108 VETNLASLEN-FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (276)
T ss_dssp TTSCCCCSTT-CCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCCCccccCc-hhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhh
Confidence 9999996444 5689999999999999999874 688899999999999999999987766554
No 286
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.64 E-value=2.8e-16 Score=174.41 Aligned_cols=153 Identities=22% Similarity=0.230 Sum_probs=133.1
Q ss_pred CCCceEecCC-----------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccc
Q 006559 57 SWRGVTCNPS-----------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSH 123 (640)
Q Consensus 57 ~w~gv~C~~~-----------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~ 123 (640)
.|.|+ |+.. ..+++.|+|+++.+++.. ..+..+++|++|+|++|.+++.++ .+..+++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 78888 8643 237899999999998864 678999999999999999998775 699999999999999
Q ss_pred ccccccCCccCCCCCCCCEEEcccCCCCC-CCCchhcCCCCCCcEEEccCCcceeccc-CCcCCCCCCcEEEcccCcCcc
Q 006559 124 NRFTGTFPSGVSSLRHLRRVDLSHNAYEG-EIPMTELTRLPNLLTLRLEDNRFTGTLY-SVNSSSRSILDFNVSNNQLSG 201 (640)
Q Consensus 124 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~~l~~L~~L~L~~N~l~g~~~-~~~~~~~~L~~l~ls~N~l~g 201 (640)
|.+++..|..|+++++|++|+|++|.+++ .+| ..+.++++|++|+|++|.+.+.+| ..+..+++|+.|++++|++++
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVT-SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSS-CSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchh-hhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 99998888889999999999999999986 345 678999999999999999655565 578889999999999999999
Q ss_pred cCCcccCCCC
Q 006559 202 QIPAWMSPFG 211 (640)
Q Consensus 202 ~ip~~~~~~~ 211 (640)
.+|..+..+.
T Consensus 163 ~~~~~l~~l~ 172 (549)
T 2z81_A 163 YQSQSLKSIR 172 (549)
T ss_dssp ECTTTTTTCS
T ss_pred cChhhhhccc
Confidence 9998876654
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.64 E-value=4.6e-16 Score=174.58 Aligned_cols=149 Identities=15% Similarity=0.212 Sum_probs=126.0
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
.+..+++.++.++..+ ..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 3456677777776644 557889999999999999999776 79999999999999999999888899999999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCCCCCCCC
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGGSSFAGN 218 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn 218 (640)
+|.++ .+|...|.++++|++|+|++|.+++.+|..+..+++|+.|+|++|.|++..+..+..+....+.+|
T Consensus 132 ~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 132 RNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 99999 466566799999999999999999999999999999999999999999865555544433333333
No 288
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.64 E-value=5.3e-15 Score=142.45 Aligned_cols=148 Identities=20% Similarity=0.185 Sum_probs=122.5
Q ss_pred EEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCC
Q 006559 72 KLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAY 150 (640)
Q Consensus 72 ~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 150 (640)
.++..+++++..+.. ..++|+.|+|++|.+++.++ .+..+++|++|+|++|++++..+..|.++++|++|+|++|++
T Consensus 11 ~v~c~~~~l~~~p~~--~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 11 TVECYSQGRTSVPTG--IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp EEECCSSCCSSCCSC--CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEecCCCccCCCCC--CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 567777777765533 35689999999999998776 478999999999999999977777789999999999999999
Q ss_pred CCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCcccC
Q 006559 151 EGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNLC 222 (640)
Q Consensus 151 ~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~lc 222 (640)
++ +|...+..+++|++|+|++|++++..+..+..+++|+.|++++|+|++..+..+..+. ...+.+|+..|
T Consensus 89 ~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 89 QS-LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred Cc-cCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 95 5546789999999999999999988888888999999999999999977665555443 33455665544
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.64 E-value=7.3e-16 Score=157.81 Aligned_cols=141 Identities=20% Similarity=0.140 Sum_probs=101.5
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC--CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL--NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|+++.++..+..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|.+++..|..+.++++|+.|+|
T Consensus 78 ~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 78 TSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp SCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 35777788887777655567777788888888887776553 5677777777777777777777777777777777777
Q ss_pred ccCCCCC-CCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCC
Q 006559 146 SHNAYEG-EIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSP 209 (640)
Q Consensus 146 s~N~l~g-~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~ 209 (640)
++|.+++ .+| ..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+..
T Consensus 158 ~~n~l~~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 158 AGNSFQENFLP-DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp TTCEEGGGEEC-SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred CCCccccccch-hHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 7777765 344 56777777777777777777776777777777777777777777655544443
No 290
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.63 E-value=2.5e-15 Score=152.25 Aligned_cols=143 Identities=17% Similarity=0.186 Sum_probs=125.3
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccccc-ccccCCccCCCCCCCCEEE
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNR-FTGTFPSGVSSLRHLRRVD 144 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~ 144 (640)
..+..|+|+++.+++.. ..+..+++|+.|+|++|.+++..+ .+..+++|++|+|++|. +....|..|.++++|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 46889999999998765 568999999999999999998754 68999999999999998 7776788999999999999
Q ss_pred cccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC
Q 006559 145 LSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG 211 (640)
Q Consensus 145 Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~ 211 (640)
|++|.+++..| ..+.++++|++|+|++|++++..+..+..+++|+.|+|++|+|++..+..+..+.
T Consensus 112 l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 177 (285)
T 1ozn_A 112 LDRCGLQELGP-GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 177 (285)
T ss_dssp CTTSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CCCCcCCEECH-hHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCcc
Confidence 99999997555 7789999999999999999988888888899999999999999977666665443
No 291
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.63 E-value=1.9e-15 Score=163.61 Aligned_cols=152 Identities=22% Similarity=0.225 Sum_probs=89.4
Q ss_pred CCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccccc
Q 006559 57 SWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNR 125 (640)
Q Consensus 57 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~ 125 (640)
.|..|.|... ...+..|+|+++.+++.. ..|.++++|+.|+|++|.+++.++ .+..+++|++|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 3678888643 236788889888887643 456666667777776666665443 45555555555555555
Q ss_pred ccccCCccCCCCCCCCEEEcccCCCCCCCCch-----------------------------------------------h
Q 006559 126 FTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMT-----------------------------------------------E 158 (640)
Q Consensus 126 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-----------------------------------------------~ 158 (640)
|++..+..|.++++|+.|+|++|++++ +|.. .
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 213 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN 213 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC
T ss_pred CCccChhhhcccCCCCEEECCCCCcce-eCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc
Confidence 554444444455555555555544431 1111 1
Q ss_pred cCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCC
Q 006559 159 LTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSP 209 (640)
Q Consensus 159 ~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~ 209 (640)
+..+++|+.|+|++|+|++..|..+..+++|+.|+|++|++++..|..+..
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 264 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG 264 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcC
Confidence 333445555666666666666666666677777777777776666655443
No 292
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.63 E-value=5.5e-16 Score=164.51 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=120.7
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
.+..+++.++.++..+ ..+..+++|++|+|++|.+++.++ .+..+++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 4556777777776544 457889999999999999998766 78999999999999999999888889999999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCC
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPF 210 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~ 210 (640)
+|.++ .+|...+.++++|++|+|++|.+++..+..+..+++|+.|++++|++++.-...+..+
T Consensus 126 ~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L 188 (390)
T 3o6n_A 126 RNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL 188 (390)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTC
T ss_pred CCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcccccccccc
Confidence 99998 5775667899999999999999999888889999999999999999987543444333
No 293
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=4.8e-16 Score=144.39 Aligned_cols=136 Identities=26% Similarity=0.257 Sum_probs=115.2
Q ss_pred CcEEEEEeCCCCCC--CCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLT--GPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~--g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|+++.++ ..+..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|+.|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 46888999999988 4445678899999999999999887 77889999999999999999888888888999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceeccc---CCcCCCCCCcEEEcccCcCcccCCc
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLY---SVNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~---~~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
++|++++..+...+..+++|++|+|++|.+++..+ ..+..+++|+.|++++|.+. .+|.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999863222578899999999999999997665 46788999999999999986 3443
No 294
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.62 E-value=1.4e-16 Score=182.22 Aligned_cols=178 Identities=22% Similarity=0.227 Sum_probs=118.6
Q ss_pred hhhHHHHHHhhhcCCCCC-CCCCCCCCCCCCCCCCCCceEecCCCCcEEEEEeCCCCCCC--------------------
Q 006559 24 YSDISTLLSFKASVTGSS-DSLSSWVNSTDPCFDSWRGVTCNPSTHRVIKLVLEDLDLTG-------------------- 82 (640)
Q Consensus 24 ~~~~~~ll~~k~~~~~~~-~~~~sW~~~~~~c~~~w~gv~C~~~~~~v~~l~l~~~~l~g-------------------- 82 (640)
..+.++|+++........ .....|.....++ ..|.++++.. .+++.|+|.++++..
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPS-GTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCcc-ccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 456778888887763211 1122563333333 2798888875 356666664443322
Q ss_pred --------CchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCC
Q 006559 83 --------PAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEI 154 (640)
Q Consensus 83 --------~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 154 (640)
+...+..++.|+.|+|++|.+...+..+..+++|++|+|++|.|+ .+|..|++|++|+.|||++|.|+ .+
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp --------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 234577889999999999999977777889999999999999999 89999999999999999999999 78
Q ss_pred CchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 155 PMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 155 p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
| ..+++|++|++|+|++|.|+ .+|..+..+++|+.|+|++|.|+|.+|..+.
T Consensus 286 p-~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 286 P-AELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp C-SSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred C-hhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 8 67999999999999999997 7788899999999999999999999987663
No 295
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.61 E-value=3.2e-15 Score=151.82 Aligned_cols=152 Identities=27% Similarity=0.269 Sum_probs=130.0
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|+++.+++... ...+++|+.|+|++|.|+..+..+..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 55 ~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp TTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT
T ss_pred CCCCEEECCCCccCcccC-CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCC
Confidence 478899999999987554 3889999999999999998877889999999999999999988888899999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCcccC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNLC 222 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~lc 222 (640)
|++++ +|...|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+.... ...+.+|+..|
T Consensus 134 N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 134 NELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCc-cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 99995 56577889999999999999999877777888999999999999999 6777665433 23345666555
No 296
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.61 E-value=1.6e-15 Score=171.12 Aligned_cols=141 Identities=16% Similarity=0.142 Sum_probs=125.7
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
..++.|+|++|.+++.. ..|.++++|++|+|++|.|++.++ .|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999865 679999999999999999998776 5899999999999999999887788999999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCccee-cccCCcCCCCCCcEEEcccCcCcccCCcccCC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTG-TLYSVNSSSRSILDFNVSNNQLSGQIPAWMSP 209 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~ 209 (640)
++|++++ +|...|+++++|++|+|++|.+++ .+|..+..+++|+.|++++|+|++..|..+..
T Consensus 132 s~N~l~~-l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 195 (635)
T 4g8a_A 132 VETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 195 (635)
T ss_dssp TTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred CCCcCCC-CChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccc
Confidence 9999996 554679999999999999999986 46777888999999999999999988876643
No 297
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.61 E-value=2e-15 Score=164.70 Aligned_cols=153 Identities=20% Similarity=0.193 Sum_probs=131.3
Q ss_pred CCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccccc
Q 006559 57 SWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNR 125 (640)
Q Consensus 57 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~ 125 (640)
.|..|.|... ...+..|+|+++.+++.. ..|..+++|+.|+|++|.+++..+ .+.++++|++|+|++|.
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 5788999743 236788999999998864 678999999999999999998755 68999999999999999
Q ss_pred ccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCc
Q 006559 126 FTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 126 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
+++..+..|.++++|+.|+|++|++++..| ..+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLD-YMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCCh-hHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 997766778999999999999999997666 7789999999999999999998888899999999999999999876555
Q ss_pred ccCCC
Q 006559 206 WMSPF 210 (640)
Q Consensus 206 ~~~~~ 210 (640)
.+..+
T Consensus 171 ~l~~l 175 (477)
T 2id5_A 171 ALSHL 175 (477)
T ss_dssp HHTTC
T ss_pred Hhccc
Confidence 55443
No 298
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.60 E-value=3.6e-16 Score=182.56 Aligned_cols=134 Identities=27% Similarity=0.312 Sum_probs=115.9
Q ss_pred ccCCCCCCEEeCCCCcCCCCCC--CCCCCCCCcEEEccccccc-----ccCCccCCCCCCCCEEEcccCCCCCCCCchhc
Q 006559 87 LSRLTQLRLLSLKNNLLSSSNL--NLSSWPHLKHLYLSHNRFT-----GTFPSGVSSLRHLRRVDLSHNAYEGEIPMTEL 159 (640)
Q Consensus 87 l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 159 (640)
+..+++|+.|+|++|.+++.++ .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|++++..| ..+
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~ 500 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPP-GVF 500 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCT-TSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccCh-hHc
Confidence 5588999999999999987654 3667899999999999997 4455678899999999999999997555 778
Q ss_pred CCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCCCCCCCCcccCC
Q 006559 160 TRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGGSSFAGNKNLCG 223 (640)
Q Consensus 160 ~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn~~lcg 223 (640)
..+++|+.|+|++|+|++.++..+. ++|+.|+|++|+|+|.+|..+..+....+.+|+..|.
T Consensus 501 ~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 501 SHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICE 562 (844)
T ss_dssp SSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCS
T ss_pred cchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccc
Confidence 9999999999999999987777764 8999999999999999999888877777888888873
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.60 E-value=4.1e-15 Score=167.18 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=128.0
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.+++.|+|+++.+++.. ..+.++++|++|+|++|.+++.++ .+.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999998865 489999999999999999998766 6899999999999999999998999999999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCccee-cccCCcCCCCCCcEEEcccCcCcccCCcccCC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTG-TLYSVNSSSRSILDFNVSNNQLSGQIPAWMSP 209 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~ 209 (640)
++|.+++..| ..++++++|++|+|++|.+++ .+|..+..+++|+.|++++|++++..|..+..
T Consensus 112 ~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 175 (606)
T 3vq2_A 112 VETKLASLES-FPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF 175 (606)
T ss_dssp TTSCCCCSSS-SCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHH
T ss_pred cCCccccccc-cccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhh
Confidence 9999996544 679999999999999999987 67999999999999999999999988876543
No 300
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.59 E-value=1.8e-15 Score=149.05 Aligned_cols=150 Identities=15% Similarity=0.224 Sum_probs=127.1
Q ss_pred CCCCC-CCceE--ecC------CCCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCc-CCCCCC-CCCCCCCCcEEE
Q 006559 53 PCFDS-WRGVT--CNP------STHRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNL-LSSSNL-NLSSWPHLKHLY 120 (640)
Q Consensus 53 ~c~~~-w~gv~--C~~------~~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~-l~~~~~-~~~~l~~L~~L~ 120 (640)
.|.|. |.++. |.. -...+..|+|.++.+++.. ..+..+++|+.|+|++|. +++.++ .+..+++|++|+
T Consensus 7 ~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~ 86 (239)
T 2xwt_C 7 PCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE 86 (239)
T ss_dssp SCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEE
T ss_pred CCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEE
Confidence 45443 36555 854 1236889999999998865 478999999999999997 887766 688999999999
Q ss_pred ccc-ccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCc---EEEccCC-cceecccCCcCCCCCCc-EEEc
Q 006559 121 LSH-NRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLL---TLRLEDN-RFTGTLYSVNSSSRSIL-DFNV 194 (640)
Q Consensus 121 Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~---~L~L~~N-~l~g~~~~~~~~~~~L~-~l~l 194 (640)
|++ |.+++..+..|.++++|+.|+|++|++++ +| . +..+++|+ +|++++| ++++..+..+..+++|+ .|++
T Consensus 87 l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp-~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FP-D-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CC-C-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred CCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-cc-c-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 999 99998777889999999999999999996 77 3 88888888 9999999 99988888899999999 9999
Q ss_pred ccCcCcccCCcc
Q 006559 195 SNNQLSGQIPAW 206 (640)
Q Consensus 195 s~N~l~g~ip~~ 206 (640)
++|+++ .+|..
T Consensus 164 ~~n~l~-~i~~~ 174 (239)
T 2xwt_C 164 YNNGFT-SVQGY 174 (239)
T ss_dssp CSCCCC-EECTT
T ss_pred CCCCCc-ccCHh
Confidence 999998 66654
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.59 E-value=6.6e-15 Score=158.82 Aligned_cols=149 Identities=20% Similarity=0.213 Sum_probs=82.0
Q ss_pred CCCceEecCC---------CCcEEEEEeCCCCCCCCc-------------------------hhccCCCCCCEEeCCCCc
Q 006559 57 SWRGVTCNPS---------THRVIKLVLEDLDLTGPA-------------------------EVLSRLTQLRLLSLKNNL 102 (640)
Q Consensus 57 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-------------------------~~l~~l~~L~~L~Ls~N~ 102 (640)
.|..|.|... ...+..|+|+++.+++.. ..|..+++|+.|+|++|.
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 4678888642 124556666666655422 345556666666666666
Q ss_pred CCCCCC-CCCCCCCCcEEEcccccccccCCccCC-------------------------CCCCCCEEEcccCCCCCCCCc
Q 006559 103 LSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVS-------------------------SLRHLRRVDLSHNAYEGEIPM 156 (640)
Q Consensus 103 l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~-------------------------~l~~L~~L~Ls~N~l~g~~p~ 156 (640)
|++.++ .+..+++|++|+|++|.++...+..|. ++++|+.|+|++|+++ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-
Confidence 665544 366667777777777766544332333 3333333333333333 222
Q ss_pred hhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 157 TELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 157 ~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
.+..+++|+.|+|++|++++..|..+..+++|+.|+|++|+|++..|..+.
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 252 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFD 252 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSST
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhc
Confidence 234445556666666666666566666666666666666666655554443
No 302
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=5.3e-16 Score=161.30 Aligned_cols=132 Identities=14% Similarity=0.090 Sum_probs=91.5
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEecccc----------------chHHH--------HHHHHHHhccCCCccccee
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERK----------------KKREV--------DEWLRVIGGLRHSNIVSIR 393 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~----------------~~~~~--------~~e~~~l~~l~H~niv~l~ 393 (640)
...||+|+||.||+|...+|+.||||+++... ..... ..|.+.|.++.+.++....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 46799999999999999899999999875320 00111 2344445555433332111
Q ss_pred EEEEcCCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCC
Q 006559 394 AYCNGKDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGN 473 (640)
Q Consensus 394 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~ 473 (640)
-+.. ...+|||||++++.|.++.... ....++.|++.+|.|||. .+||||||||.|||+++++.
T Consensus 180 p~~~--~~~~LVME~i~G~~L~~l~~~~-----------~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 180 PIAQ--SRHTIVMSLVDALPMRQVSSVP-----------DPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp EEEE--ETTEEEEECCSCEEGGGCCCCS-----------CHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEEC
T ss_pred eeec--cCceEEEEecCCccHhhhcccH-----------HHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCCC
Confidence 1111 1237999999998887654311 234578999999999995 45999999999999987763
Q ss_pred ----------eEEccCCccccc
Q 006559 474 ----------ACISDIGVHQLF 485 (640)
Q Consensus 474 ----------~kl~DfGl~~~~ 485 (640)
+.|+||+-+-..
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 889999865443
No 303
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.59 E-value=3.8e-15 Score=161.27 Aligned_cols=140 Identities=16% Similarity=0.164 Sum_probs=87.7
Q ss_pred CcEEEEEeCCCCCCCCch-----------hcc--CCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCcc
Q 006559 68 HRVIKLVLEDLDLTGPAE-----------VLS--RLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSG 133 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~-----------~l~--~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~ 133 (640)
.++..+++.++.+.+... .+. ..++|+.|+|++|.+.+.++ .+..+++|++|+|++|.+++..|..
T Consensus 239 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 318 (455)
T 3v47_A 239 TKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNA 318 (455)
T ss_dssp CCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT
T ss_pred cceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhH
Confidence 466777776664443210 111 22567777777777766544 4666677777777777777666666
Q ss_pred CCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 134 VSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 134 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
|.++++|+.|+|++|.+++..| ..+..+++|++|+|++|++++..|..+..+++|+.|+|++|+|++..+..+.
T Consensus 319 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 392 (455)
T 3v47_A 319 FWGLTHLLKLNLSQNFLGSIDS-RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFD 392 (455)
T ss_dssp TTTCTTCCEEECCSSCCCEECG-GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred hcCcccCCEEECCCCccCCcCh-hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhc
Confidence 6777777777777777764333 5566677777777777777766666666667777777777777654444433
No 304
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.59 E-value=3.2e-15 Score=168.01 Aligned_cols=139 Identities=17% Similarity=0.134 Sum_probs=71.1
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC--CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL--NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
++..|+|+++.+++.+..+..+++|+.|+|++|.+.+.++ .+..+++|++|+|++|.+++.+|..+.++++|+.|+|+
T Consensus 377 ~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 456 (606)
T 3vq2_A 377 SLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMA 456 (606)
T ss_dssp CCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred cccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECC
Confidence 4556666666655544445555555555555555554433 34455555555555555555555555555555555555
Q ss_pred cCCCCCC-CCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 147 HNAYEGE-IPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 147 ~N~l~g~-~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
+|.+++. +| ..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+|..+.
T Consensus 457 ~n~l~~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 518 (606)
T 3vq2_A 457 GNSFKDNTLS-NVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518 (606)
T ss_dssp TCEEGGGEEC-SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTT
T ss_pred CCcCCCcchH-HhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHcc
Confidence 5555442 23 3444455555555555555554444444455555555555555544444443
No 305
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.58 E-value=1.3e-14 Score=137.95 Aligned_cols=126 Identities=18% Similarity=0.261 Sum_probs=108.6
Q ss_pred CEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCc-cCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccC
Q 006559 94 RLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPS-GVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLED 172 (640)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~ 172 (640)
+.|++++|.|+..+..+.. +|++|+|++|+|++..+. .|.++++|+.|+|++|++++..| ..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEP-NAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCH-hHcCCcccCCEEECCC
Confidence 6899999999887665543 899999999999987775 48999999999999999998767 7899999999999999
Q ss_pred CcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCCC---CCCCCcccC
Q 006559 173 NRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGGS---SFAGNKNLC 222 (640)
Q Consensus 173 N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~---~~~gn~~lc 222 (640)
|+|++..+..+..+++|+.|+|++|+|++.+|..+..++.. .+.+|+..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 99999999989999999999999999999999887765443 345565443
No 306
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=9.9e-16 Score=139.22 Aligned_cols=126 Identities=25% Similarity=0.232 Sum_probs=70.2
Q ss_pred cEEEEEeCCCCCC--CCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLT--GPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~--g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
++..|+++++.++ ..+..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|+.|+|+
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 4555566666555 2234445566666666666666555 455556666666666666665555555556666666666
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceeccc---CCcCCCCCCcEEEcc
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLY---SVNSSSRSILDFNVS 195 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~---~~~~~~~~L~~l~ls 195 (640)
+|.+++......+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666542111345556666666666666655443 344555566665554
No 307
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.57 E-value=4.6e-15 Score=141.63 Aligned_cols=129 Identities=17% Similarity=0.240 Sum_probs=106.5
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
++..|+++++.++... .+..+++|+.|+|++|.+... +.+..+++|++|+|++|.+++..|..+.++++|+.|+|++|
T Consensus 45 ~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n 122 (197)
T 4ezg_A 45 SLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHS 122 (197)
T ss_dssp TCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSS
T ss_pred CccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCC
Confidence 5778888888887533 688889999999999976554 36788899999999999998888888999999999999999
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcc
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSG 201 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 201 (640)
++++..| ..+..+++|++|+|++|.+.+.+| .+..+++|+.|++++|++++
T Consensus 123 ~i~~~~~-~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 123 AHDDSIL-TKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp BCBGGGH-HHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred ccCcHhH-HHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 9987666 678889999999999998444455 57778899999999999886
No 308
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.56 E-value=1.5e-14 Score=163.01 Aligned_cols=134 Identities=19% Similarity=0.256 Sum_probs=114.8
Q ss_pred eCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCC
Q 006559 75 LEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGE 153 (640)
Q Consensus 75 l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 153 (640)
-.+.+|+..+..+- ++++.|||++|.|++.++ .|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++
T Consensus 38 c~~~~l~~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~- 114 (635)
T 4g8a_A 38 CMELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS- 114 (635)
T ss_dssp CTTSCCSSCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE-
T ss_pred CCCCCcCccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC-
Confidence 34456665443331 479999999999999876 69999999999999999999888899999999999999999995
Q ss_pred CCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcc-cCCcccCCCC
Q 006559 154 IPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSG-QIPAWMSPFG 211 (640)
Q Consensus 154 ~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g-~ip~~~~~~~ 211 (640)
+|...|.++++|++|+|++|++++..+..+..+++|+.|+|++|+|++ .+|..+..+.
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~ 173 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 173 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCT
T ss_pred CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccch
Confidence 665789999999999999999999888889999999999999999976 4677665443
No 309
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.55 E-value=9.7e-15 Score=166.46 Aligned_cols=139 Identities=22% Similarity=0.246 Sum_probs=114.5
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.+++.|+|+++.+++.. ..+.++++|++|+|++|.+++.++ .+.++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47889999999988866 468889999999999999888765 4778888999999999888655557888899999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCccc
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWM 207 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~ 207 (640)
++|++++ +|+..+.++++|++|+|++|.+++..|..+..+++|+.|++++|++++..|..+
T Consensus 105 ~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 105 MSNSIQK-IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CSSCCCC-CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CCCccCc-cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHh
Confidence 9998875 444678888899999999998888888888888888888888888887766543
No 310
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.55 E-value=1.1e-14 Score=170.08 Aligned_cols=151 Identities=19% Similarity=0.161 Sum_probs=130.7
Q ss_pred CCCCceEecCCCCcEEEEEeCCCCCCCC-chhccCCCCCCEEeCCCCcCCCC--CCCCCCCCCCcEEEcccccccccCCc
Q 006559 56 DSWRGVTCNPSTHRVIKLVLEDLDLTGP-AEVLSRLTQLRLLSLKNNLLSSS--NLNLSSWPHLKHLYLSHNRFTGTFPS 132 (640)
Q Consensus 56 ~~w~gv~C~~~~~~v~~l~l~~~~l~g~-~~~l~~l~~L~~L~Ls~N~l~~~--~~~~~~l~~L~~L~Ls~N~l~g~~p~ 132 (640)
++|+.|-+ ...++..|+|++|.+++. +..+.++++|++|+|++|.+.+. +..+.++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 47888877 335899999999999875 46799999999999999977654 33699999999999999999999999
Q ss_pred cCCCCCCCCEEEcccCCCCCCCCc-hhcCCCCCCcEEEccCCcceeccc-CCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 133 GVSSLRHLRRVDLSHNAYEGEIPM-TELTRLPNLLTLRLEDNRFTGTLY-SVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 133 ~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~~l~~L~~L~L~~N~l~g~~~-~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
.|.++++|++|+|++|.+++.+|. ..+.++++|++|+|++|.+++..+ ..+.++++|+.|+|++|.+++..|..+.
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcc
Confidence 999999999999999999987762 238899999999999999998765 5688999999999999999998887654
No 311
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.55 E-value=1.9e-14 Score=145.04 Aligned_cols=136 Identities=19% Similarity=0.261 Sum_probs=95.3
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|+++.+++.. ..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|++++..+..+.++++|+.|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 35777788887777644 467778888888888888877654 5777788888888888887766667777888888888
Q ss_pred ccCCCCC-CCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCc----EEEcccCcCcccCC
Q 006559 146 SHNAYEG-EIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSIL----DFNVSNNQLSGQIP 204 (640)
Q Consensus 146 s~N~l~g-~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~----~l~ls~N~l~g~ip 204 (640)
++|.+++ .+| ..+..+++|++|+|++|++++..+..+..+.+|+ .|++++|++++..+
T Consensus 132 ~~n~l~~~~l~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~ 194 (276)
T 2z62_A 132 AHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 194 (276)
T ss_dssp CSSCCCCCCCC-GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECT
T ss_pred cCCccceecCc-hhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCc
Confidence 8888775 245 5677778888888888877776555544444443 55566665554443
No 312
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=161.72 Aligned_cols=139 Identities=21% Similarity=0.186 Sum_probs=81.6
Q ss_pred EEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC--CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 71 IKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL--NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 71 ~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
..|+|+++.+.+....+..+++|+.|+|++|.+.+.++ .+..+++|++|+|++|.+.+.+|..+.++++|+.|+|++|
T Consensus 376 ~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 455 (570)
T 2z63_A 376 KYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 455 (570)
T ss_dssp CEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTC
T ss_pred CEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCC
Confidence 33344444333333335555566666666665555433 3556666666666666666666666666666666666666
Q ss_pred CCC-CCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCC
Q 006559 149 AYE-GEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPF 210 (640)
Q Consensus 149 ~l~-g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~ 210 (640)
.++ +.+| ..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..|..+..+
T Consensus 456 ~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 517 (570)
T 2z63_A 456 SFQENFLP-DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRL 517 (570)
T ss_dssp EEGGGEEC-SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred cCccccch-hhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcc
Confidence 665 3455 556666666666666666666666666666666666666666666555544433
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.54 E-value=1e-14 Score=163.86 Aligned_cols=154 Identities=16% Similarity=0.101 Sum_probs=132.1
Q ss_pred CCceEecCC---------CCcEEEEEeCCCCCCCC-chhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccc
Q 006559 58 WRGVTCNPS---------THRVIKLVLEDLDLTGP-AEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRF 126 (640)
Q Consensus 58 w~gv~C~~~---------~~~v~~l~l~~~~l~g~-~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l 126 (640)
+..|.|... ...++.|+|+++.+++. +..+.++++|++|+|++|.+.+..+ .|.++++|++|+|++|.+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 566778542 24789999999999986 4689999999999999999998755 699999999999999999
Q ss_pred cccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcc
Q 006559 127 TGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAW 206 (640)
Q Consensus 127 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~ 206 (640)
++..|..|+++++|++|+|++|.+++..| ..+.++++|++|+|++|++++..++.+..+++|+.|++++|++++..|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDF-IPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGG-SCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCc-chhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99999999999999999999999996434 66899999999999999999855444445999999999999999888876
Q ss_pred cCCCCC
Q 006559 207 MSPFGG 212 (640)
Q Consensus 207 ~~~~~~ 212 (640)
++.+..
T Consensus 173 ~~~l~~ 178 (606)
T 3t6q_A 173 MSSLQQ 178 (606)
T ss_dssp HHTTTT
T ss_pred hhhhcc
Confidence 665543
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.54 E-value=5.2e-15 Score=152.02 Aligned_cols=135 Identities=24% Similarity=0.340 Sum_probs=67.5
Q ss_pred cEEEEEeCCCCCCCCc-hhc--cCCCCCCEEeCCCCcCCCCCCCCCCC-----CCCcEEEcccccccccCCccCCCCCCC
Q 006559 69 RVIKLVLEDLDLTGPA-EVL--SRLTQLRLLSLKNNLLSSSNLNLSSW-----PHLKHLYLSHNRFTGTFPSGVSSLRHL 140 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~L 140 (640)
++..|+|+++.+++.. ..+ ..+++|+.|+|++|.+++.+..+..+ ++|++|+|++|++++..|..|+++++|
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 4555555555555432 212 55555555555555555553333333 555555555555555555555555555
Q ss_pred CEEEcccCCCCCCCCc-hhc--CCCCCCcEEEccCCccee--ccc-CCcCCCCCCcEEEcccCcCcccC
Q 006559 141 RRVDLSHNAYEGEIPM-TEL--TRLPNLLTLRLEDNRFTG--TLY-SVNSSSRSILDFNVSNNQLSGQI 203 (640)
Q Consensus 141 ~~L~Ls~N~l~g~~p~-~~~--~~l~~L~~L~L~~N~l~g--~~~-~~~~~~~~L~~l~ls~N~l~g~i 203 (640)
+.|+|++|++.|.++. ..+ ..+++|++|+|++|+|++ .++ ..+..+++|+.|+|++|+|++.+
T Consensus 176 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 176 STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 5555555555543210 122 455555555555555552 111 22234455555555555555544
No 315
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=3.9e-14 Score=131.77 Aligned_cols=106 Identities=23% Similarity=0.274 Sum_probs=59.7
Q ss_pred EEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCc
Q 006559 95 LLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNR 174 (640)
Q Consensus 95 ~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~ 174 (640)
.|++++|.|+..+..+ .++|++|+|++|+|++..|..|.++++|+.|+|++|+|++ +|...|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLASVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCc-cChhhccCCCCCCEEECCCCc
Confidence 3444444444443333 2455666666666665555556666666666666666653 333445566666666666666
Q ss_pred ceecccCCcCCCCCCcEEEcccCcCcccC
Q 006559 175 FTGTLYSVNSSSRSILDFNVSNNQLSGQI 203 (640)
Q Consensus 175 l~g~~~~~~~~~~~L~~l~ls~N~l~g~i 203 (640)
|++..+..+..+++|+.|+|++|.|++..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 66555555555666666666666665543
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.53 E-value=7.2e-15 Score=160.43 Aligned_cols=115 Identities=18% Similarity=0.095 Sum_probs=67.7
Q ss_pred CCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCC-CCCCCCEEEcccCCCCCCCCchhcCCCCCCc
Q 006559 89 RLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVS-SLRHLRRVDLSHNAYEGEIPMTELTRLPNLL 166 (640)
Q Consensus 89 ~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~ 166 (640)
.+++|+.|+|++|.|++.++ .++.+++|++|+|++|.|++.+|..+. ++++|+.|+|++|.+++. | .+..+++|+
T Consensus 118 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~--~~~~l~~L~ 194 (487)
T 3oja_A 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K--GQVVFAKLK 194 (487)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E--CCCCCTTCC
T ss_pred ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c--ccccCCCCC
Confidence 34556666666666665533 455666666666666666666555554 566666666666666643 2 133466666
Q ss_pred EEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 167 TLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 167 ~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
.|+|++|.|++.+|. +..+++|+.|+|++|+|++ +|.++.
T Consensus 195 ~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 195 TLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp EEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCC
T ss_pred EEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhc
Confidence 666666666654433 5556666666666666664 454443
No 317
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.53 E-value=2.8e-15 Score=169.32 Aligned_cols=137 Identities=19% Similarity=0.285 Sum_probs=86.3
Q ss_pred cEEEEEeCCCCCCC------------------Cchhcc--CCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccccc-c
Q 006559 69 RVIKLVLEDLDLTG------------------PAEVLS--RLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNR-F 126 (640)
Q Consensus 69 ~v~~l~l~~~~l~g------------------~~~~l~--~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~-l 126 (640)
++..|+|+++.++| .++.++ ++++|++|+|++|.+.+..| .++++++|++|+|++|+ |
T Consensus 207 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l 286 (636)
T 4eco_A 207 KLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGI 286 (636)
T ss_dssp TCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTS
T ss_pred CCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCC
Confidence 45566666666666 445555 66666666666666665443 46666666666666666 6
Q ss_pred cc-cCCccCCCC------CCCCEEEcccCCCCCCCCch--hcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccC
Q 006559 127 TG-TFPSGVSSL------RHLRRVDLSHNAYEGEIPMT--ELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNN 197 (640)
Q Consensus 127 ~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~~--~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N 197 (640)
+| .+|..++++ ++|+.|+|++|+++ .+| . .++++++|++|+|++|+++|.+| .+..+++|+.|++++|
T Consensus 287 ~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip-~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 287 SGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFP-VETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYN 363 (636)
T ss_dssp CHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCC-CHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSS
T ss_pred ccccchHHHHhhhccccCCCCCEEECCCCcCC-ccC-chhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCC
Confidence 66 666665554 66666666666666 566 3 56666666666666666666666 5556666666666666
Q ss_pred cCcccCCcccCC
Q 006559 198 QLSGQIPAWMSP 209 (640)
Q Consensus 198 ~l~g~ip~~~~~ 209 (640)
+++ .+|.++..
T Consensus 364 ~l~-~lp~~l~~ 374 (636)
T 4eco_A 364 QIT-EIPANFCG 374 (636)
T ss_dssp EEE-ECCTTSEE
T ss_pred ccc-cccHhhhh
Confidence 666 56655443
No 318
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.53 E-value=1.3e-14 Score=160.36 Aligned_cols=139 Identities=24% Similarity=0.320 Sum_probs=110.1
Q ss_pred CCCCCCCCCCC---CCCce-EecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEc
Q 006559 46 SWVNSTDPCFD---SWRGV-TCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYL 121 (640)
Q Consensus 46 sW~~~~~~c~~---~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L 121 (640)
+|....++|.. .|.|+ .|.. .+++.|+|+++++++.+..+ +++|+.|+|++|.|+..+ ..+++|++|+|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~lp~~l--~~~L~~L~Ls~N~l~~ip---~~l~~L~~L~L 107 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSSLPDNL--PPQITVLEITQNALISLP---ELPASLEYLDA 107 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSCCCSCC--CTTCSEEECCSSCCSCCC---CCCTTCCEEEC
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCccCHhH--cCCCCEEECcCCCCcccc---cccCCCCEEEc
Confidence 56545556643 59999 7875 47999999999999866544 378999999999998655 56789999999
Q ss_pred ccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcc
Q 006559 122 SHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSG 201 (640)
Q Consensus 122 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 201 (640)
++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++
T Consensus 108 s~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 108 CDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred cCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 9999987 777 665 89999999999986 773 57888888998888887 554 46788888888888887
Q ss_pred cCCc
Q 006559 202 QIPA 205 (640)
Q Consensus 202 ~ip~ 205 (640)
+|.
T Consensus 175 -lp~ 177 (571)
T 3cvr_A 175 -LPE 177 (571)
T ss_dssp -CCC
T ss_pred -cch
Confidence 666
No 319
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.53 E-value=4.9e-14 Score=145.81 Aligned_cols=149 Identities=19% Similarity=0.297 Sum_probs=120.8
Q ss_pred CCCCCCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEc
Q 006559 53 PCFDSWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYL 121 (640)
Q Consensus 53 ~c~~~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L 121 (640)
.|.|+|+.+.|... ...+..|+|+++.+++.. ..+.++++|++|+|++|.+++..+ .+..+++|++|+|
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 45568999999742 236788999999998865 478999999999999999998744 7899999999999
Q ss_pred ccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCccee--cccCCcCCCCCCcEEEcccCcC
Q 006559 122 SHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTG--TLYSVNSSSRSILDFNVSNNQL 199 (640)
Q Consensus 122 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g--~~~~~~~~~~~L~~l~ls~N~l 199 (640)
++|.++ .+|..+. ++|+.|+|++|.+++ ++...+.++++|+.|+|++|.++. ..+..+..+++|+.|++++|++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 999998 5666554 789999999999985 454778889999999999998863 6667777888888888888888
Q ss_pred cccCCcc
Q 006559 200 SGQIPAW 206 (640)
Q Consensus 200 ~g~ip~~ 206 (640)
+. +|..
T Consensus 184 ~~-l~~~ 189 (330)
T 1xku_A 184 TT-IPQG 189 (330)
T ss_dssp CS-CCSS
T ss_pred cc-CCcc
Confidence 74 5543
No 320
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.53 E-value=1.7e-14 Score=137.69 Aligned_cols=129 Identities=21% Similarity=0.276 Sum_probs=110.1
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCC-CCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSS-NLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
.++..|++.++.++.. +.+..+++|+.|+|++|.+++. +..+..+++|++|+|++|.+++..|..++.+++|+.|+|+
T Consensus 66 ~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 66 HNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp TTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 3688899999977654 4788999999999999999874 4579999999999999999999889999999999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcc
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSG 201 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 201 (640)
+|.+.+.+| .+..+++|+.|++++|++++.. .+..+++|+.|++++|++.+
T Consensus 145 ~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 145 YNGAITDIM--PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SCTBCCCCG--GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC----
T ss_pred CCCCccccH--hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcccCC
Confidence 998444666 5889999999999999999743 67779999999999999875
No 321
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.52 E-value=5.2e-14 Score=145.80 Aligned_cols=148 Identities=22% Similarity=0.330 Sum_probs=108.9
Q ss_pred CCCCCCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEc
Q 006559 53 PCFDSWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYL 121 (640)
Q Consensus 53 ~c~~~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L 121 (640)
.|.|.|+.+.|... ..++..|+|+++.+++.. ..+..+++|+.|+|++|.+++..+ .+..+++|++|+|
T Consensus 30 ~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 30 GCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp SCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred CCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 45568999999642 135777888888877653 467888888888888888887644 5788888888888
Q ss_pred ccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcce--ecccCCcCCCCCCcEEEcccCcC
Q 006559 122 SHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFT--GTLYSVNSSSRSILDFNVSNNQL 199 (640)
Q Consensus 122 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~--g~~~~~~~~~~~L~~l~ls~N~l 199 (640)
++|.++ .+|..+. ++|++|+|++|++++ +|...+..+++|+.|++++|.++ +..+..+..+ +|+.|++++|++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCC-CCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCc-cCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 888887 5665554 788888888888874 55466788888888888888885 3556666666 777888888887
Q ss_pred cccCCcc
Q 006559 200 SGQIPAW 206 (640)
Q Consensus 200 ~g~ip~~ 206 (640)
++ +|..
T Consensus 185 ~~-l~~~ 190 (332)
T 2ft3_A 185 TG-IPKD 190 (332)
T ss_dssp SS-CCSS
T ss_pred Cc-cCcc
Confidence 75 4543
No 322
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.52 E-value=1.2e-14 Score=131.87 Aligned_cols=113 Identities=17% Similarity=0.227 Sum_probs=100.4
Q ss_pred CCCCCCEEeCCCCcCC-C-CCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCc
Q 006559 89 RLTQLRLLSLKNNLLS-S-SNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLL 166 (640)
Q Consensus 89 ~l~~L~~L~Ls~N~l~-~-~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~ 166 (640)
..++|+.|+|++|.++ + .+..+..+++|++|+|++|.+++. ..+.++++|+.|+|++|.+++.+| ..+..+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLE-VLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTH-HHHHHCTTCC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHH-HHhhhCCCCC
Confidence 4578999999999998 4 445679999999999999999976 778999999999999999998777 6777899999
Q ss_pred EEEccCCcceec-ccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 167 TLRLEDNRFTGT-LYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 167 ~L~L~~N~l~g~-~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
+|+|++|++++. .+..+..+++|+.|++++|++++..+
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999999984 45778889999999999999998765
No 323
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.52 E-value=1e-13 Score=131.77 Aligned_cols=125 Identities=22% Similarity=0.304 Sum_probs=106.2
Q ss_pred CEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCC
Q 006559 94 RLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDN 173 (640)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N 173 (640)
+.+++++|.++..+..+. ++|++|+|++|.|+ .+|..|.++++|+.|+|++|++++ ++...|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIST-LSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCE-eCHhHccCCCCCCEEECCCC
Confidence 578999999998766543 68999999999998 788999999999999999999996 44478999999999999999
Q ss_pred cceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCcccC
Q 006559 174 RFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNLC 222 (640)
Q Consensus 174 ~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~lc 222 (640)
+|++..+..+..+++|+.|+|++|+|++..+..+..+. ...+.+|+..|
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999988999999999999999999976665555443 34456676655
No 324
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.52 E-value=6.8e-14 Score=146.75 Aligned_cols=138 Identities=22% Similarity=0.217 Sum_probs=118.6
Q ss_pred CceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCC-CC-CCCCCcEEEcccccccccCCccCCC
Q 006559 59 RGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLN-LS-SWPHLKHLYLSHNRFTGTFPSGVSS 136 (640)
Q Consensus 59 ~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~-~l~~L~~L~Ls~N~l~g~~p~~~~~ 136 (640)
..=.|.. + .+++.+++|+..+..+. ..|+.|+|++|.|++.++. +. .+++|+.|+|++|+|++..|..|.+
T Consensus 14 ~~C~C~~---~--~l~c~~~~l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~ 86 (361)
T 2xot_A 14 ANCLCAS---N--ILSCSKQQLPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVP 86 (361)
T ss_dssp TTCEEET---T--EEECCSSCCSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTT
T ss_pred CCCEECC---C--EEEeCCCCcCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccC
Confidence 3556753 2 47888888887665443 4689999999999997764 55 8999999999999999988889999
Q ss_pred CCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 137 LRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 137 l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
+++|+.|+|++|+|++ +|...|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|++..+
T Consensus 87 l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 87 VPNLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp CTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG
T ss_pred CCCCCEEECCCCcCCc-CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH
Confidence 9999999999999985 554779999999999999999999999999999999999999999996433
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=9.9e-15 Score=149.75 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=97.0
Q ss_pred CcEEEEEeCCCCCCCCc-----hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccccccccc--C--CccCCCC
Q 006559 68 HRVIKLVLEDLDLTGPA-----EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGT--F--PSGVSSL 137 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-----~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~--~--p~~~~~l 137 (640)
.++..|+|++|.+++.. ..+..+++|+.|+|++|.+.+.++ .+..+++|++|+|++|++.+. + +..++++
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 35677788888877632 233467888888888888877665 577888888888888887652 2 2234677
Q ss_pred CCCCEEEcccCCCCCCCCc---hhcCCCCCCcEEEccCCcceecccCCcCCC---CCCcEEEcccCcCcccCCccc
Q 006559 138 RHLRRVDLSHNAYEGEIPM---TELTRLPNLLTLRLEDNRFTGTLYSVNSSS---RSILDFNVSNNQLSGQIPAWM 207 (640)
Q Consensus 138 ~~L~~L~Ls~N~l~g~~p~---~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~---~~L~~l~ls~N~l~g~ip~~~ 207 (640)
++|++|+|++|+++. +|. ..+..+++|++|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+
T Consensus 197 ~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~ 270 (310)
T 4glp_A 197 PAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGL 270 (310)
T ss_dssp CCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCC
T ss_pred CCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhh
Confidence 888888888888862 331 124667788888888888887766665555 57888888888887 666654
No 326
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=8.4e-14 Score=130.02 Aligned_cols=105 Identities=22% Similarity=0.309 Sum_probs=62.9
Q ss_pred EEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCc
Q 006559 95 LLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNR 174 (640)
Q Consensus 95 ~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~ 174 (640)
.+++++|.|+..+..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++ +|...|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECCCCc
Confidence 45555555554444332 556666666666666666666666666666666666664 443445666666666666666
Q ss_pred ceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 175 FTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 175 l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
|++..+..+..+++|+.|+|++|.|...
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred cceeCHHHhccccCCCEEEeCCCCcccc
Confidence 6655555566666666666666666543
No 327
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.51 E-value=4.7e-14 Score=153.71 Aligned_cols=143 Identities=17% Similarity=0.165 Sum_probs=126.0
Q ss_pred CcEEEEEeCCCCCCCC-chhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGP-AEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~-~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|+++.+++. +..+.++++|+.|+|++|.+++.++ .+..+++|++|+|++|.+++..|..|.++++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 4788999999999876 4678999999999999999998876 4789999999999999999999999999999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG 211 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~ 211 (640)
++|.+++..| ..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+.
T Consensus 136 ~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~ 200 (477)
T 2id5_A 136 GDNDLVYISH-RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 200 (477)
T ss_dssp CCTTCCEECT-TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCT
T ss_pred CCCccceeCh-hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCc
Confidence 9999987555 7789999999999999999987777788899999999999999987776665443
No 328
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.51 E-value=8e-14 Score=158.84 Aligned_cols=138 Identities=24% Similarity=0.294 Sum_probs=111.7
Q ss_pred hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccC----C----ccCCCCCCCCEEEcccCCCCCCCC
Q 006559 85 EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTF----P----SGVSSLRHLRRVDLSHNAYEGEIP 155 (640)
Q Consensus 85 ~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~----p----~~~~~l~~L~~L~Ls~N~l~g~~p 155 (640)
..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|.+++.. | ..|.++++|+.|+|++|+++ .+|
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~ 552 (680)
T 1ziw_A 474 SPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIP 552 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCC
T ss_pred cccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCC
Confidence 557788889999999999888766 4788899999999999988642 2 23788899999999999998 677
Q ss_pred chhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcc----cCCCCCCCCCCCcccCC
Q 006559 156 MTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAW----MSPFGGSSFAGNKNLCG 223 (640)
Q Consensus 156 ~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~----~~~~~~~~~~gn~~lcg 223 (640)
...|.++++|+.|+|++|++++..+..+..+++|+.|+|++|+|++..|.. +..+....+.+|+..|.
T Consensus 553 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 553 VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred HHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 667889999999999999999877777888899999999999999877764 34555566778887774
No 329
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.51 E-value=7.9e-15 Score=150.63 Aligned_cols=110 Identities=19% Similarity=0.204 Sum_probs=71.5
Q ss_pred CCCCCCEEeCCCCcCCCCCC-CC--CCCCCCcEEEcccccccccCCccCCCC-----CCCCEEEcccCCCCCCCCchhcC
Q 006559 89 RLTQLRLLSLKNNLLSSSNL-NL--SSWPHLKHLYLSHNRFTGTFPSGVSSL-----RHLRRVDLSHNAYEGEIPMTELT 160 (640)
Q Consensus 89 ~l~~L~~L~Ls~N~l~~~~~-~~--~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~ 160 (640)
.+++|++|+|++|.+++..+ .+ ..+++|++|+|++|.+++. |..++++ ++|++|+|++|++++..| ..+.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~-~~~~ 170 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSC-EQVR 170 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCT-TTCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchH-HHhc
Confidence 56777777777777765443 33 6677777777777777765 6655555 677777777777765443 5666
Q ss_pred CCCCCcEEEccCCcceecc--cCCc--CCCCCCcEEEcccCcCc
Q 006559 161 RLPNLLTLRLEDNRFTGTL--YSVN--SSSRSILDFNVSNNQLS 200 (640)
Q Consensus 161 ~l~~L~~L~L~~N~l~g~~--~~~~--~~~~~L~~l~ls~N~l~ 200 (640)
.+++|++|+|++|+++|.+ +..+ ..+++|+.|+|++|+|+
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 7777777777777766542 2222 55667777777777776
No 330
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.51 E-value=1.3e-13 Score=153.44 Aligned_cols=138 Identities=21% Similarity=0.223 Sum_probs=93.2
Q ss_pred CcEEEEEeCCCCCCCC-chhccCCCCCCEEeCCCCcCCCCCC---CCCCCCCCcEEEcccccccccCCc-cCCCCCCCCE
Q 006559 68 HRVIKLVLEDLDLTGP-AEVLSRLTQLRLLSLKNNLLSSSNL---NLSSWPHLKHLYLSHNRFTGTFPS-GVSSLRHLRR 142 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~-~~~l~~l~~L~~L~Ls~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~ 142 (640)
..+..|+|+++.+++. +..+..+++|+.|+|++|.+++.+. .+..+++|++|+|++|.+++.+|. .+..+++|+.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 4567777777777763 3566777777777777777776432 467777777777777777775554 3667777777
Q ss_pred EEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcc-cCCC
Q 006559 143 VDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAW-MSPF 210 (640)
Q Consensus 143 L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~-~~~~ 210 (640)
|+|++|++++.+| ..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|.. +..+
T Consensus 433 L~l~~n~l~~~~~-~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l 496 (562)
T 3a79_B 433 LNLSSNMLTGSVF-RCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRL 496 (562)
T ss_dssp EECCSSCCCGGGG-SSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTC
T ss_pred EECCCCCCCcchh-hhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcC
Confidence 7777777776555 2222 57777777777777 45555556777777777777777 45554 4433
No 331
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.50 E-value=1.3e-13 Score=142.73 Aligned_cols=138 Identities=20% Similarity=0.289 Sum_probs=94.5
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCC--C-CCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEE
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSS--S-NLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRV 143 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~--~-~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 143 (640)
..+..|++.++.+++.. ..+..+++|+.|+|++|.+.. . +..+..+++|++|++++|.++. +|..+. ++|+.|
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L 197 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTEL 197 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEE
Confidence 35778888888887654 457888888888888888863 2 2246677777777777777764 454443 667777
Q ss_pred EcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCC
Q 006559 144 DLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPF 210 (640)
Q Consensus 144 ~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~ 210 (640)
+|++|++++..| ..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|+ .+|.++..+
T Consensus 198 ~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 198 HLDGNKITKVDA-ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp ECTTSCCCEECT-GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred ECCCCcCCccCH-HHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 777777765444 56677777777777777777666666666777777777777776 566655443
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.50 E-value=3.2e-14 Score=140.06 Aligned_cols=139 Identities=17% Similarity=0.206 Sum_probs=106.5
Q ss_pred CcEEEEEeCCCC-CCCCc-hhccCCCCCCEEeCCC-CcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCC--
Q 006559 68 HRVIKLVLEDLD-LTGPA-EVLSRLTQLRLLSLKN-NLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLR-- 141 (640)
Q Consensus 68 ~~v~~l~l~~~~-l~g~~-~~l~~l~~L~~L~Ls~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-- 141 (640)
.++..|+|+++. ++... ..+..+++|+.|+|++ |.+++.++ .+..+++|++|+|++|.+++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 468888888886 76644 4688889999999988 88887665 57788889999999998886 666 88888888
Q ss_pred -EEEcccC-CCCCCCCchhcCCCCCCc-EEEccCCcceecccCCcCCCCCCcEEEcccCc-CcccCCcccCCC
Q 006559 142 -RVDLSHN-AYEGEIPMTELTRLPNLL-TLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQ-LSGQIPAWMSPF 210 (640)
Q Consensus 142 -~L~Ls~N-~l~g~~p~~~~~~l~~L~-~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~-l~g~ip~~~~~~ 210 (640)
.|+|++| .+++ +|...|..+++|+ .|+|++|+++...+..+.. .+|+.|++++|+ +++..|..+..+
T Consensus 133 ~~L~l~~N~~l~~-i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l 203 (239)
T 2xwt_C 133 FILEITDNPYMTS-IPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGV 203 (239)
T ss_dssp EEEEEESCTTCCE-ECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTC
T ss_pred cEEECCCCcchhh-cCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhcc
Confidence 8999988 8874 5546688888888 8999888888433334443 788888888884 886555555544
No 333
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=1e-13 Score=155.51 Aligned_cols=110 Identities=20% Similarity=0.176 Sum_probs=96.5
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
++..|+|+++.+++.. ..++.+++|+.|+|++|.+++.++ .++.+++|++|+|++|.|++..+..|+++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 6788999999998865 488999999999999999999877 47899999999999999997666667999999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEEccCCcceecc
Q 006559 147 HNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTL 179 (640)
Q Consensus 147 ~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~ 179 (640)
+|.+++..| ..+..+++|++|+|++|.+++..
T Consensus 156 ~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~ 187 (597)
T 3oja_B 156 NNNLERIED-DTFQATTSLQNLQLSSNRLTHVD 187 (597)
T ss_dssp SSCCCBCCT-TTTTTCTTCCEEECTTSCCSBCC
T ss_pred CCcCCCCCh-hhhhcCCcCcEEECcCCCCCCcC
Confidence 999997655 77899999999999999998753
No 334
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.50 E-value=3.2e-15 Score=170.87 Aligned_cols=140 Identities=23% Similarity=0.250 Sum_probs=121.2
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
..+..|+|++|.+...+..+..+++|+.|+|++|.|+..+..+..|++|++|+|++|.|+ .+|..|++|++|+.|+|++
T Consensus 224 ~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 302 (727)
T 4b8c_D 224 QLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFD 302 (727)
T ss_dssp CCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCS
T ss_pred CCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCC
Confidence 468889999999987777778999999999999999976668999999999999999999 7899999999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCC-CcEEEcccCcCcccCCcccCCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRS-ILDFNVSNNQLSGQIPAWMSPF 210 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~-L~~l~ls~N~l~g~ip~~~~~~ 210 (640)
|.|+ .+| ..|+++++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..+..+
T Consensus 303 N~l~-~lp-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 303 NMVT-TLP-WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp SCCC-CCC-SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred CCCC-ccC-hhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 9997 788 56999999999999999999999887654322 2347899999999999877644
No 335
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=1.2e-14 Score=167.84 Aligned_cols=141 Identities=21% Similarity=0.270 Sum_probs=123.8
Q ss_pred CcEEEEEeCCCCCCC------------------Cchhcc--CCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccccc-
Q 006559 68 HRVIKLVLEDLDLTG------------------PAEVLS--RLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNR- 125 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g------------------~~~~l~--~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~- 125 (640)
.++..|+|++|.++| .++.++ ++++|+.|+|++|.+.+..| .+.++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 468899999999999 566766 99999999999999988766 69999999999999998
Q ss_pred ccc-cCCccCCCCC-------CCCEEEcccCCCCCCCCc-hhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEccc
Q 006559 126 FTG-TFPSGVSSLR-------HLRRVDLSHNAYEGEIPM-TELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSN 196 (640)
Q Consensus 126 l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~-~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~ 196 (640)
|+| .+|..+++++ +|+.|+|++|+++ .+|. ..+.++++|+.|+|++|+++ .+| .+..+++|+.|+|++
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDY 604 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCS
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcC
Confidence 999 8887666554 9999999999999 8993 27999999999999999999 788 888899999999999
Q ss_pred CcCcccCCcccCCCCC
Q 006559 197 NQLSGQIPAWMSPFGG 212 (640)
Q Consensus 197 N~l~g~ip~~~~~~~~ 212 (640)
|+|+ .+|.++..+..
T Consensus 605 N~l~-~lp~~l~~l~~ 619 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTD 619 (876)
T ss_dssp SCCS-CCCTTSCEECT
T ss_pred Cccc-cchHHHhhccc
Confidence 9999 89987765443
No 336
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=2.1e-14 Score=134.41 Aligned_cols=128 Identities=19% Similarity=0.144 Sum_probs=101.8
Q ss_pred cEEEEEeCCCCCCCCchhccCCC-CCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLT-QLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.+..|+|+++.++... .+..+. +|+.|+|++|.|++. +.+..+++|++|+|++|.|++..|..+..+++|+.|+|++
T Consensus 20 ~L~~L~l~~n~l~~i~-~~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 97 (176)
T 1a9n_A 20 RDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTN 97 (176)
T ss_dssp SCEEEECTTSCCCSCC-CGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCS
T ss_pred CceEEEeeCCCCchhH-HhhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCC
Confidence 6788889988888653 344444 899999999998876 6788889999999999999876555568889999999999
Q ss_pred CCCCCCCCc-hhcCCCCCCcEEEccCCcceecccC----CcCCCCCCcEEEcccCcCc
Q 006559 148 NAYEGEIPM-TELTRLPNLLTLRLEDNRFTGTLYS----VNSSSRSILDFNVSNNQLS 200 (640)
Q Consensus 148 N~l~g~~p~-~~~~~l~~L~~L~L~~N~l~g~~~~----~~~~~~~L~~l~ls~N~l~ 200 (640)
|+++ .+|. ..+..+++|+.|+|++|.++. +|. .+..+++|+.||+++|.+.
T Consensus 98 N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 98 NSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9986 5662 367888999999999999874 444 3677888999999888765
No 337
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.49 E-value=5.6e-14 Score=130.33 Aligned_cols=121 Identities=18% Similarity=0.214 Sum_probs=103.2
Q ss_pred cCCCCCCEEeCCCCcCC-C-CCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCC
Q 006559 88 SRLTQLRLLSLKNNLLS-S-SNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNL 165 (640)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~-~-~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L 165 (640)
...++|+.|+|++|.++ + .+..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|++++.+| ..+..+++|
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L 97 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLD-MLAEKLPNL 97 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCC-HHHHHCTTC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHH-HHHhhCCCC
Confidence 34588999999999998 4 444678999999999999999976 789999999999999999998777 677789999
Q ss_pred cEEEccCCcceecc-cCCcCCCCCCcEEEcccCcCcccCC---cccCCCC
Q 006559 166 LTLRLEDNRFTGTL-YSVNSSSRSILDFNVSNNQLSGQIP---AWMSPFG 211 (640)
Q Consensus 166 ~~L~L~~N~l~g~~-~~~~~~~~~L~~l~ls~N~l~g~ip---~~~~~~~ 211 (640)
++|+|++|++++.. +..+..+++|+.|++++|.+++..+ ..+..++
T Consensus 98 ~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~ 147 (168)
T 2ell_A 98 THLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLP 147 (168)
T ss_dssp CEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCS
T ss_pred CEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCc
Confidence 99999999999853 3678889999999999999997655 3454443
No 338
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.49 E-value=6.4e-14 Score=156.08 Aligned_cols=136 Identities=20% Similarity=0.250 Sum_probs=123.9
Q ss_pred cEEEEEeCCCCCCCCc--hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEccccccc-ccCCccCCCCCCCCEEE
Q 006559 69 RVIKLVLEDLDLTGPA--EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFT-GTFPSGVSSLRHLRRVD 144 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~--~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 144 (640)
.+..|++.++.+.+.. ..+..+++|+.|+|++|.+.+..+ .+..+++|++|+|++|.++ +.+|..+..+++|+.|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 5778888888887654 478999999999999999988765 6889999999999999998 68999999999999999
Q ss_pred cccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCc
Q 006559 145 LSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 145 Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
|++|++++..| ..+..+++|++|+|++|++++.++..+..+++|+.|++++|.++|.+|.
T Consensus 477 l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 477 LSQCQLEQLSP-TAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTSCCCEECT-TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCccccCCh-hhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999998667 7899999999999999999999888899999999999999999999884
No 339
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.49 E-value=2.9e-14 Score=155.60 Aligned_cols=148 Identities=20% Similarity=0.233 Sum_probs=125.4
Q ss_pred CCCceEecCCCCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCC-CCCCCcEEEcccccccccCCcc
Q 006559 57 SWRGVTCNPSTHRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLS-SWPHLKHLYLSHNRFTGTFPSG 133 (640)
Q Consensus 57 ~w~gv~C~~~~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~-~l~~L~~L~Ls~N~l~g~~p~~ 133 (640)
.+.++.|..- ..+..|+|++|.+++.. ..++.+++|+.|+|++|.|++.++ .+. .+++|++|+|++|.|++..+
T Consensus 110 ~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~-- 186 (487)
T 3oja_A 110 NISRVSCSRG-QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-- 186 (487)
T ss_dssp CCCCEEECCC-SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--
T ss_pred cCCCCCcccc-CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--
Confidence 5777777643 57899999999999875 578899999999999999998655 454 79999999999999998733
Q ss_pred CCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCc-ccCCcccCCC
Q 006559 134 VSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLS-GQIPAWMSPF 210 (640)
Q Consensus 134 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~-g~ip~~~~~~ 210 (640)
+..+++|+.|+|++|.+++ +| ..+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.+. +.+|.++..+
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l 261 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN 261 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-EC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTC
T ss_pred cccCCCCCEEECCCCCCCC-CC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhC
Confidence 4469999999999999996 55 348899999999999999997 6777888999999999999998 7777766543
No 340
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.4e-13 Score=127.99 Aligned_cols=105 Identities=19% Similarity=0.222 Sum_probs=88.7
Q ss_pred EEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCC
Q 006559 73 LVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYE 151 (640)
Q Consensus 73 l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 151 (640)
++++++.++..+..+ .++|+.|+|++|.|++.++ .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|+
T Consensus 14 l~~s~n~l~~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~ 91 (170)
T 3g39_A 14 VDCSGKSLASVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK 91 (170)
T ss_dssp EECTTSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred EEeCCCCcCccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccC
Confidence 344455666655434 3889999999999999866 6899999999999999999877778899999999999999999
Q ss_pred CCCCchhcCCCCCCcEEEccCCcceeccc
Q 006559 152 GEIPMTELTRLPNLLTLRLEDNRFTGTLY 180 (640)
Q Consensus 152 g~~p~~~~~~l~~L~~L~L~~N~l~g~~~ 180 (640)
+ +|...|..+++|++|+|++|.++...+
T Consensus 92 ~-~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 92 S-IPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp C-CCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred E-eCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 6 554679999999999999999987543
No 341
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.48 E-value=2.3e-13 Score=152.90 Aligned_cols=144 Identities=19% Similarity=0.161 Sum_probs=130.7
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.+..|++.++.+++.. ..+..+++|+.|+|++|.++..+..+..+++|++|+|++|.+++..|..+.++++|+.|+|++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCS
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCC
Confidence 6899999999998866 558999999999999999998877899999999999999999998898999999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecc--cCCcCCCCCCcEEEcccCcCcccCCcccCCCCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTL--YSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGG 212 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~--~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~ 212 (640)
|.+.+.+|...+..+++|++|+|++|.+++.. +..+..+++|+.|++++|++++..|..+..++.
T Consensus 335 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 401 (606)
T 3t6q_A 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ 401 (606)
T ss_dssp CSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTT
T ss_pred CCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCcc
Confidence 99999998777999999999999999999876 778888999999999999999988887765543
No 342
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.48 E-value=7.7e-14 Score=153.74 Aligned_cols=136 Identities=18% Similarity=0.302 Sum_probs=87.2
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCC-CCCCCCCCCcEEEcccccccc--cCCccCCCCCCCCEEEc
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSN-LNLSSWPHLKHLYLSHNRFTG--TFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L 145 (640)
.+..|+++++.+.... ....+++|+.|+|++|.+++.. ..+..+++|++|+|++|++++ .+|..+.++++|+.|+|
T Consensus 303 ~L~~L~l~~n~l~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~L 381 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML-CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDI 381 (520)
T ss_dssp CCSEEEEESSCCCCCC-CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEEC
T ss_pred ceeEEEcCCCcccccc-chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEEC
Confidence 3666666666655432 1256667777777777776633 356667777777777777765 45566667777777777
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
++|.+++.+|...+..+++|+.|+|++|++++.+|..+. ++|+.|++++|+|+ .+|.++.
T Consensus 382 s~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 382 SQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp CSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred CCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 777776656644466667777777777777666665542 56667777777766 5665543
No 343
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.47 E-value=5.8e-13 Score=124.58 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=104.6
Q ss_pred CCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccC
Q 006559 93 LRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLED 172 (640)
Q Consensus 93 L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~ 172 (640)
.+.+++++|.++..+..+ .++|+.|+|++|++++..+..|.++++|++|+|++|++++ +|...+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE-eChhHccCCCccCEEECCC
Confidence 578999999998876544 3789999999999998777788999999999999999995 5547789999999999999
Q ss_pred CcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCcccC
Q 006559 173 NRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNLC 222 (640)
Q Consensus 173 N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~lc 222 (640)
|+|++..+..+..+++|+.|++++|+|++..+..+..+. ...+.+|+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 999988888888899999999999999966555444443 33445565433
No 344
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.47 E-value=3.8e-13 Score=134.48 Aligned_cols=124 Identities=20% Similarity=0.261 Sum_probs=87.0
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
++..|+++++.++... .+..+++|+.|+|++|.+++.++ +..+++|++|+|++|++++ +|... . ++|+.|+|++|
T Consensus 42 ~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N 116 (263)
T 1xeu_A 42 GVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNN 116 (263)
T ss_dssp TCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSS
T ss_pred cCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCC
Confidence 5666777777776543 56777777777777777777655 7777777777777777775 33322 2 77777777777
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
++++ +| .+..+++|+.|+|++|++++. + .+..+++|+.|+|++|+|++.
T Consensus 117 ~l~~-~~--~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 117 ELRD-TD--SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSB-SG--GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred ccCC-Ch--hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 7775 33 467777777777777777764 2 456677777777777777765
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.47 E-value=2.2e-13 Score=138.35 Aligned_cols=124 Identities=31% Similarity=0.379 Sum_probs=87.4
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
++..|+|+++.+++..+ +..+++|+.|+|++|.+++. +.+..+++|++|+|++|.+++. +.+..+++|+.|+|++|
T Consensus 69 ~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n 144 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDL-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNN 144 (291)
T ss_dssp TCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCG-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSS
T ss_pred CCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCC-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCC
Confidence 56777777777776555 77777777777777777664 3467777777777777777653 45667777777777777
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcc
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSG 201 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 201 (640)
++++. ..+..+++|+.|+|++|++++..+ +..+++|+.|++++|+|++
T Consensus 145 ~l~~~---~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 145 KITDI---TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CCCCC---GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred cCCcc---hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 77753 346677777777777777776554 6667777777777777765
No 346
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.46 E-value=3.9e-13 Score=142.47 Aligned_cols=110 Identities=20% Similarity=0.190 Sum_probs=92.7
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.++..|+|+++.+++.. ..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|.++...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 36778899999888754 578999999999999999998876 4789999999999999998554555789999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEEccCCcceec
Q 006559 146 SHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGT 178 (640)
Q Consensus 146 s~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~ 178 (640)
++|.+++..| ..+..+++|++|+|++|++++.
T Consensus 149 ~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 149 SNNNLERIED-DTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CSSCCCBCCT-TTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCccCccCh-hhccCCCCCCEEECCCCcCCcc
Confidence 9999986544 6788899999999999998864
No 347
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.46 E-value=2e-14 Score=147.40 Aligned_cols=142 Identities=21% Similarity=0.228 Sum_probs=111.0
Q ss_pred cEEEEEeCCCCCCCCc-hhc--cCCCCCCEEeCCCCcCCCCCC-----CCCCCCCCcEEEcccccccccCCccCCCCCCC
Q 006559 69 RVIKLVLEDLDLTGPA-EVL--SRLTQLRLLSLKNNLLSSSNL-----NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHL 140 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l--~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 140 (640)
++..|+|.++.+++.. ..+ ..+++|+.|+|++|.+++..+ .+..+++|++|+|++|.+++..|..|+++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 3788888888888754 334 889999999999999987543 24578899999999999988888889999999
Q ss_pred CEEEcccCCCCCC--CC-chhcCCCCCCcEEEccCCcceeccc--C-CcCCCCCCcEEEcccCcCcccCCcccCCC
Q 006559 141 RRVDLSHNAYEGE--IP-MTELTRLPNLLTLRLEDNRFTGTLY--S-VNSSSRSILDFNVSNNQLSGQIPAWMSPF 210 (640)
Q Consensus 141 ~~L~Ls~N~l~g~--~p-~~~~~~l~~L~~L~L~~N~l~g~~~--~-~~~~~~~L~~l~ls~N~l~g~ip~~~~~~ 210 (640)
++|||++|++.+. ++ ...+..+++|++|+|++|+++...+ . .+..+++|+.|+|++|+|++.+|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999998753 22 1234678899999999999973221 1 24567899999999999999888766544
No 348
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.46 E-value=1.3e-13 Score=152.94 Aligned_cols=109 Identities=28% Similarity=0.391 Sum_probs=100.4
Q ss_pred CCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEcc
Q 006559 92 QLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLE 171 (640)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~ 171 (640)
.|+.|+|++|.|++.+ .++.+++|+.|+|++|.|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp--~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD--GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG--GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCCCc-CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc--ccCCCCCCcEEECC
Confidence 5889999999999865 4999999999999999999 889999999999999999999997 66 68999999999999
Q ss_pred CCcceecc-cCCcCCCCCCcEEEcccCcCcccCCc
Q 006559 172 DNRFTGTL-YSVNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 172 ~N~l~g~~-~~~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
+|+|++.+ |..+..+++|+.|+|++|+|++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999987 88999999999999999999987663
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.45 E-value=3.3e-13 Score=138.21 Aligned_cols=128 Identities=23% Similarity=0.320 Sum_probs=106.0
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|+++.+++... +..+++|+.|+|++|.+++. +.+..+++|++|+|++|.+++. |. +..+++|+.|+|++
T Consensus 63 ~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~ 138 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDL 138 (308)
T ss_dssp TTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCS
T ss_pred CCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCC
Confidence 468889999998888766 88999999999999998875 4688889999999999999863 43 88899999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
|.+++ ++ .+..+++|+.|+|++|++++..+ +..+++|+.|++++|++++..|
T Consensus 139 n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 139 NQITN-IS--PLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp SCCCC-CG--GGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG
T ss_pred CccCc-Cc--cccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh
Confidence 99985 44 27888899999999999987554 7778899999999999886544
No 350
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.45 E-value=3.8e-13 Score=136.59 Aligned_cols=128 Identities=25% Similarity=0.421 Sum_probs=113.1
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+++++.+... +.+..+++|+.|+|++|.+++.++ +..+++|++|+|++|.+++ + +.+..+++|+.|+|++
T Consensus 46 ~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEH 121 (291)
T ss_dssp HTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTT
T ss_pred CcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEEECCC
Confidence 3588899999988765 458899999999999999999776 9999999999999999987 3 3489999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
|++++ ++ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++..|
T Consensus 122 n~i~~-~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 122 NGISD-IN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-CG--GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch--hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 99986 43 588999999999999999985 567789999999999999998655
No 351
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.45 E-value=1.4e-13 Score=152.68 Aligned_cols=122 Identities=25% Similarity=0.228 Sum_probs=108.4
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
.+..|+|++|.+++.+. ++.+++|+.|+|++|.|+..|..++.+++|+.|+|++|.|++ +| .++++++|+.|+|++|
T Consensus 442 ~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp TCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CceEEEecCCCCCCCcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 36679999999999765 999999999999999999777789999999999999999997 67 8999999999999999
Q ss_pred CCCCCC-CchhcCCCCCCcEEEccCCcceecccCC---cCCCCCCcEEEc
Q 006559 149 AYEGEI-PMTELTRLPNLLTLRLEDNRFTGTLYSV---NSSSRSILDFNV 194 (640)
Q Consensus 149 ~l~g~~-p~~~~~~l~~L~~L~L~~N~l~g~~~~~---~~~~~~L~~l~l 194 (640)
+|++.+ | ..+..+++|+.|+|++|+|++.+|.. ...+++|+.|++
T Consensus 519 ~l~~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 519 RLQQSAAI-QPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CCCSSSTT-GGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCc-HHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999876 7 78999999999999999999887643 234788888865
No 352
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.44 E-value=4.9e-13 Score=133.62 Aligned_cols=125 Identities=23% Similarity=0.304 Sum_probs=111.2
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|++|.+++..+ +..+++|+.|+|++|.+++.+. +.. ++|++|+|++|++++. +.+..+++|+.|+|++
T Consensus 63 ~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~ 137 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRN 137 (263)
T ss_dssp TTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTT
T ss_pred CCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCC
Confidence 478999999999998776 9999999999999999998654 333 9999999999999974 3689999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
|++++ +| .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++.
T Consensus 138 N~i~~-~~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 138 NKLKS-IV--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp SCCCB-CG--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CcCCC-Ch--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 99996 44 588999999999999999987 6678899999999999999866
No 353
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.44 E-value=3.9e-13 Score=144.93 Aligned_cols=153 Identities=20% Similarity=0.251 Sum_probs=129.1
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCc-CCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEE
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNL-LSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVD 144 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~-l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 144 (640)
.++..|+|++|.++... ..+..+++|+.|+|++|. +...++ .+..+++|++|+|++|+++ .+| .+..+++|+.|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEE
Confidence 46889999999998754 578999999999999854 444444 5889999999999999998 455 488999999999
Q ss_pred cccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCccc
Q 006559 145 LSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNL 221 (640)
Q Consensus 145 Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~l 221 (640)
|++|++++..| ..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|++..+..+..+. ...+.+|+..
T Consensus 214 Ls~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 214 LSGNHLSAIRP-GSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCCccCccCh-hhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 99999997656 7899999999999999999999999999999999999999999977776665443 4456788777
Q ss_pred CC
Q 006559 222 CG 223 (640)
Q Consensus 222 cg 223 (640)
|.
T Consensus 293 Cd 294 (440)
T 3zyj_A 293 CN 294 (440)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 354
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.44 E-value=3.5e-13 Score=145.79 Aligned_cols=153 Identities=18% Similarity=0.227 Sum_probs=128.8
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCC-cCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEE
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNN-LLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVD 144 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N-~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 144 (640)
.++..|+|++|.++... ..+..+++|+.|+|++| .+...++ .+..+++|++|+|++|++++. | .+..+++|+.|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 224 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELE 224 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEE
Confidence 46889999999998754 57899999999999984 5554444 588999999999999999864 4 588999999999
Q ss_pred cccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC---CCCCCCCccc
Q 006559 145 LSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG---GSSFAGNKNL 221 (640)
Q Consensus 145 Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn~~l 221 (640)
|++|.+++..| ..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|+|++..+..+..+. ...+.+|+..
T Consensus 225 Ls~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 225 MSGNHFPEIRP-GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTSCCSEECG-GGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CcCCcCcccCc-ccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 99999997555 7899999999999999999999999999999999999999999977776665444 3456778766
Q ss_pred CC
Q 006559 222 CG 223 (640)
Q Consensus 222 cg 223 (640)
|.
T Consensus 304 Cd 305 (452)
T 3zyi_A 304 CD 305 (452)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.44 E-value=3.6e-13 Score=137.90 Aligned_cols=125 Identities=22% Similarity=0.266 Sum_probs=77.1
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
++..|++.++.++... .+..+++|+.|+|++|.+.+.++ +..+++|++|+|++|.+++. +.+..+++|+.|+|++|
T Consensus 42 ~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n 117 (308)
T 1h6u_A 42 GITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTST 117 (308)
T ss_dssp TCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTS
T ss_pred CcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCC
Confidence 4556666666655432 45666666666666666666554 66666666666666666642 24666666666666666
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
++++ +| .+..+++|++|+|++|++++..+ +..+++|+.|++++|++++.
T Consensus 118 ~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 118 QITD-VT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp CCCC-CG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCCC-ch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC
Confidence 6664 33 25666666666666666665443 55566666666666666653
No 356
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.44 E-value=9.4e-14 Score=153.02 Aligned_cols=137 Identities=18% Similarity=0.239 Sum_probs=114.4
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
.+++.|+|+++.+++.. ..+..+++|++|+|++|.+++..+ .+..+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 47888999999998866 678999999999999999988754 6889999999999999998 46665 7899999999
Q ss_pred ccCCCCC-CCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCC--cEEEcccCcC--cccCCcccCCCC
Q 006559 146 SHNAYEG-EIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSI--LDFNVSNNQL--SGQIPAWMSPFG 211 (640)
Q Consensus 146 s~N~l~g-~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L--~~l~ls~N~l--~g~ip~~~~~~~ 211 (640)
++|.+++ .+| ..++++++|++|+|++|++++. .+..+++| +.|++++|++ ++.+|..+..+.
T Consensus 98 ~~N~l~~~~~p-~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 98 SFNAFDALPIC-KEFGNMSQLKFLGLSTTHLEKS---SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CSSCCSSCCCC-GGGGGCTTCCEEEEEESSCCGG---GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred cCCccccccch-hhhccCCcceEEEecCcccchh---hccccccceeeEEEeecccccccccccccccccc
Confidence 9999987 466 6788999999999999999873 34456667 9999999999 888888776654
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.44 E-value=6.4e-13 Score=148.24 Aligned_cols=126 Identities=30% Similarity=0.370 Sum_probs=109.8
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|+++.+++..+ +..+++|+.|+|++|.|++. +.+..+++|+.|+|++|.|++. +.+..|++|+.|+|++
T Consensus 65 ~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~ 140 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKDL-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGN 140 (605)
T ss_dssp TTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCC-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCCC-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCC
Confidence 468899999999988766 88999999999999999875 4788999999999999999863 4688999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
|.+++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++.
T Consensus 141 N~l~~l---~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 141 NKITDI---TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp SCCCCC---GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CccCCc---hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 999864 468899999999999999998777 77899999999999999874
No 358
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.43 E-value=3.2e-13 Score=139.86 Aligned_cols=138 Identities=18% Similarity=0.221 Sum_probs=87.5
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCC--CCC-CCCCC--------------------CCCcEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSS--SNL-NLSSW--------------------PHLKHLYLSH 123 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~--~~~-~~~~l--------------------~~L~~L~Ls~ 123 (640)
..+..|+++++.+++.. ..+..+++|+.|+|++|.++. ..+ .+..+ ++|++|+|++
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~ 202 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDH 202 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCS
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCC
Confidence 36888999999988765 458889999999999998853 222 33333 3455555555
Q ss_pred ccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccC
Q 006559 124 NRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQI 203 (640)
Q Consensus 124 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~i 203 (640)
|.+++..|..+.++++|+.|+|++|++++..| ..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..
T Consensus 203 n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~ 280 (332)
T 2ft3_A 203 NKIQAIELEDLLRYSKLYRLGLGHNQIRMIEN-GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVG 280 (332)
T ss_dssp SCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCT-TGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCcCCh-hHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccC
Confidence 55555555556666666666666666664333 45566666666666666666 45555555666666666666666544
Q ss_pred Cccc
Q 006559 204 PAWM 207 (640)
Q Consensus 204 p~~~ 207 (640)
+..+
T Consensus 281 ~~~~ 284 (332)
T 2ft3_A 281 VNDF 284 (332)
T ss_dssp TTSS
T ss_pred hhHc
Confidence 4433
No 359
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.43 E-value=3.5e-13 Score=150.06 Aligned_cols=133 Identities=23% Similarity=0.250 Sum_probs=63.9
Q ss_pred cEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
+++.|+|++|.+++.. ..+..+++|++|+|++|.+++..+ .+..+++|++|+|++|+|+ .+|.. .+++|++|+|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLS 129 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECC
T ss_pred CcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECC
Confidence 4445555555555443 345555555555555555554433 3455555555555555554 33433 45555555555
Q ss_pred cCCCCC-CCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCC--cEEEcccCcC--cccCCcccC
Q 006559 147 HNAYEG-EIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSI--LDFNVSNNQL--SGQIPAWMS 208 (640)
Q Consensus 147 ~N~l~g-~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L--~~l~ls~N~l--~g~ip~~~~ 208 (640)
+|++++ .+| ..+.++++|++|+|++|++++.. +..+.+| +.|++++|++ ++..|..+.
T Consensus 130 ~N~l~~l~~p-~~~~~l~~L~~L~L~~n~l~~~~---~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~ 192 (562)
T 3a79_B 130 FNDFDVLPVC-KEFGNLTKLTFLGLSAAKFRQLD---LLPVAHLHLSCILLDLVSYHIKGGETESLQ 192 (562)
T ss_dssp SSCCSBCCCC-GGGGGCTTCCEEEEECSBCCTTT---TGGGTTSCEEEEEEEESSCCCCSSSCCEEE
T ss_pred CCCccccCch-HhhcccCcccEEecCCCccccCc---hhhhhhceeeEEEeecccccccccCccccc
Confidence 555543 122 34555555555555555554321 2222233 5555555555 454454443
No 360
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.43 E-value=9e-13 Score=137.66 Aligned_cols=146 Identities=20% Similarity=0.182 Sum_probs=121.3
Q ss_pred CCceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCC
Q 006559 58 WRGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSS 136 (640)
Q Consensus 58 w~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 136 (640)
-....|... .+ .++++++++..+..+. ++|+.|+|++|.+++.++ .+..+++|++|+|++|.+++..|..|.+
T Consensus 25 ~~~~~C~~~--~~--c~~~~~~l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (353)
T 2z80_A 25 QASLSCDRN--GI--CKGSSGSLNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS 98 (353)
T ss_dssp --CCEECTT--SE--EECCSTTCSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ccCCCCCCC--eE--eeCCCCCccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCC
Confidence 357788653 33 7888888887665443 589999999999998776 6999999999999999999988999999
Q ss_pred CCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceeccc-CCcCCCCCCcEEEcccCc-CcccCCcccCCC
Q 006559 137 LRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLY-SVNSSSRSILDFNVSNNQ-LSGQIPAWMSPF 210 (640)
Q Consensus 137 l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~-~~~~~~~~L~~l~ls~N~-l~g~ip~~~~~~ 210 (640)
+++|++|+|++|++++ +|...+.++++|++|+|++|++++..+ ..+..+++|+.|++++|+ +++..|..+..+
T Consensus 99 l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 173 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL 173 (353)
T ss_dssp CTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred CCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCC
Confidence 9999999999999995 675668999999999999999996554 478889999999999995 665555555443
No 361
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.42 E-value=8e-13 Score=146.51 Aligned_cols=142 Identities=20% Similarity=0.213 Sum_probs=120.9
Q ss_pred EecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCC
Q 006559 62 TCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHL 140 (640)
Q Consensus 62 ~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 140 (640)
.|... .+ .++.+++++..+..+. ++|+.|+|++|.+++.++ .+..+++|++|+|++|++++..|..|+++++|
T Consensus 3 ~C~~~--~~--c~~~~~~l~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 3 SCDAS--GV--CDGRSRSFTSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp EECTT--SE--EECTTSCCSSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCC--ce--EECCCCccccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 57542 34 6888888887665443 799999999999998765 79999999999999999999999999999999
Q ss_pred CEEEcccCCCCCCCCchhcCCCCCCcEEEccCCccee-cccCCcCCCCCCcEEEcccCcCcccCC-cccCCC
Q 006559 141 RRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTG-TLYSVNSSSRSILDFNVSNNQLSGQIP-AWMSPF 210 (640)
Q Consensus 141 ~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l~g~ip-~~~~~~ 210 (640)
++|||++|.+++. |+..++++++|++|+|++|++++ .+|..+..+++|+.|++++|++.+.+| ..+..+
T Consensus 77 ~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 77 EHLDLSDNHLSSL-SSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp CEEECTTSCCCSC-CHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred CEEECCCCccCcc-CHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 9999999999964 43779999999999999999997 467788999999999999999777776 455544
No 362
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.42 E-value=5.8e-13 Score=138.65 Aligned_cols=131 Identities=20% Similarity=0.288 Sum_probs=77.8
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
.+..|+++++.+.+... +..+++|+.|++++|.+.+..+ +..+++|++|+|++|.+++..+ +..+++|+.|+|++|
T Consensus 178 ~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 253 (347)
T 4fmz_A 178 DLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTN 253 (347)
T ss_dssp TCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CCCEEEccCCccccccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCC
Confidence 56777777777766443 5666666666666666665443 5556666666666666654332 556666666666666
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
.+++ + ..+..+++|+.|++++|++++. +.+..+++|+.|++++|++++..|..+.
T Consensus 254 ~l~~-~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 254 QISD-I--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp CCCC-C--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred ccCC-C--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 6654 2 2355566666666666666553 2344556666666666666655554443
No 363
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.42 E-value=1.9e-13 Score=140.70 Aligned_cols=114 Identities=18% Similarity=0.090 Sum_probs=68.6
Q ss_pred CCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccC-CCCCCCCEEEcccCCCCCCCCchhcCCCCCCcE
Q 006559 90 LTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGV-SSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLT 167 (640)
Q Consensus 90 l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~ 167 (640)
+++|+.|+|++|.+++.++ .+..+++|++|+|++|.+++..|..+ ..+++|+.|+|++|.+++. | ....+++|++
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~l~~L~~ 195 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K--GQVVFAKLKT 195 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E--CCCCCTTCCE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c--cccccccCCE
Confidence 5566666666666666544 45666666666666666666555554 3566666666666666642 3 1234666666
Q ss_pred EEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccC
Q 006559 168 LRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMS 208 (640)
Q Consensus 168 L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~ 208 (640)
|+|++|++++..+. +..+++|+.|+|++|+|+ .+|..+.
T Consensus 196 L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~ 234 (317)
T 3o53_A 196 LDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALR 234 (317)
T ss_dssp EECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCC
T ss_pred EECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhh
Confidence 66666666654333 555666666777766666 3454443
No 364
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.40 E-value=1.9e-13 Score=140.67 Aligned_cols=138 Identities=20% Similarity=0.241 Sum_probs=116.2
Q ss_pred CcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC-CC-CCCCCCcEEEcccccccccCCccCCCCCCCCEEE
Q 006559 68 HRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL-NL-SSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVD 144 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 144 (640)
..+..|+|++|.+++.. ..+..+++|+.|+|++|.+++.++ .+ ..+++|++|+|++|.+++. | ....+++|+.|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEE
Confidence 35777888888888764 467889999999999999998654 34 4789999999999999876 3 334599999999
Q ss_pred cccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCc-ccCCcccCCC
Q 006559 145 LSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLS-GQIPAWMSPF 210 (640)
Q Consensus 145 Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~-g~ip~~~~~~ 210 (640)
|++|++++ +| ..+..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++ +.+|.++..+
T Consensus 198 Ls~N~l~~-l~-~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~ 261 (317)
T 3o53_A 198 LSSNKLAF-MG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN 261 (317)
T ss_dssp CCSSCCCE-EC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTC
T ss_pred CCCCcCCc-ch-hhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhcc
Confidence 99999995 66 458899999999999999995 6777888999999999999999 7777776554
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.39 E-value=9.3e-13 Score=146.93 Aligned_cols=128 Identities=23% Similarity=0.320 Sum_probs=114.1
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|+++.+++.. .+..+++|+.|+|++|.|.+. +.+..+++|+.|+|++|.|++. ..+..+++|+.|+|++
T Consensus 87 ~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~ 162 (605)
T 1m9s_A 87 KNLGWLFLDENKIKDLS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLED 162 (605)
T ss_dssp TTCCEEECCSSCCCCCT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCS
T ss_pred CCCCEEECcCCCCCCCh-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcC
Confidence 46889999999999864 789999999999999999985 5688999999999999999975 6789999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
|.+++..| +..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++++...
T Consensus 163 N~l~~~~~---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 163 NQISDIVP---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp SCCCCCGG---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCC
T ss_pred CcCCCchh---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcc
Confidence 99997544 88999999999999999985 357789999999999999987533
No 366
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.39 E-value=9.1e-13 Score=143.13 Aligned_cols=128 Identities=27% Similarity=0.333 Sum_probs=111.6
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+++++.+++..+ +..+++|+.|+|++|.+++.++ +..+++|+.|+|++|++++..| +..+++|+.|+|++
T Consensus 243 ~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~ 318 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYF 318 (466)
T ss_dssp TTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCS
T ss_pred CCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcC
Confidence 468889999999988765 8899999999999999998765 8889999999999999987544 78899999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
|++++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++.+|
T Consensus 319 n~l~~~~~---~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 319 NNISDISP---VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp SCCSCCGG---GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CcCCCchh---hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 99997544 67889999999999999985 467778999999999999998887
No 367
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=2.1e-12 Score=120.49 Aligned_cols=106 Identities=21% Similarity=0.301 Sum_probs=91.2
Q ss_pred EEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCC
Q 006559 71 IKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNA 149 (640)
Q Consensus 71 ~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 149 (640)
..++++++.++..+..+. ++|+.|+|++|.|++.++ .+..+++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 356778888876555443 899999999999999866 68999999999999999998766678999999999999999
Q ss_pred CCCCCCchhcCCCCCCcEEEccCCcceecc
Q 006559 150 YEGEIPMTELTRLPNLLTLRLEDNRFTGTL 179 (640)
Q Consensus 150 l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~ 179 (640)
|++ +|...|..+++|++|+|++|.|....
T Consensus 93 l~~-l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 93 LKS-IPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCC-CCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred cce-eCHHHhccccCCCEEEeCCCCccccc
Confidence 995 66466999999999999999998654
No 368
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=1.2e-12 Score=136.30 Aligned_cols=111 Identities=23% Similarity=0.314 Sum_probs=85.6
Q ss_pred CC-CCCCCceEecCCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCC-CcCCCCCC-CCCCCCCCcEEEccccccccc
Q 006559 53 PC-FDSWRGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKN-NLLSSSNL-NLSSWPHLKHLYLSHNRFTGT 129 (640)
Q Consensus 53 ~c-~~~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ 129 (640)
.| .|.|..|.|... ++|+..+. +..+++|+.|+|++ |.|++.++ .|..+++|+.|+|++|+|++.
T Consensus 4 ~c~~C~~~~v~~~~~-----------n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 71 (347)
T 2ifg_A 4 ACCPHGSSGLRCTRD-----------GALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71 (347)
T ss_dssp SSCCSSSSCEECCSS-----------CCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEE
T ss_pred cCccccCCEEEcCCC-----------CCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCcccee
Confidence 35 458888888642 25666556 88888888888886 88888765 588888888888888888888
Q ss_pred CCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCccee
Q 006559 130 FPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTG 177 (640)
Q Consensus 130 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g 177 (640)
.|..|.+|++|+.|||++|+|++ +|...+..++ |+.|+|.+|.|..
T Consensus 72 ~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 72 APDAFHFTPRLSRLNLSFNALES-LSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CTTGGGSCSCCCEEECCSSCCSC-CCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CHHHhcCCcCCCEEeCCCCccce-eCHHHcccCC-ceEEEeeCCCccC
Confidence 88888888888888888888884 5545555555 8888888888774
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.38 E-value=1.4e-12 Score=141.67 Aligned_cols=126 Identities=29% Similarity=0.310 Sum_probs=112.4
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|++.++.+++. +.+..+++|+.|+|++|.+++.++ +..+++|+.|+|++|.+++..| +..+++|+.|+|++
T Consensus 221 ~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 296 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNE 296 (466)
T ss_dssp TTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred CCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCC
Confidence 4688999999998875 568899999999999999998765 8899999999999999997544 88999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCccc
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
|++++..| +..+++|+.|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 297 n~l~~~~~---~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 297 NQLEDISP---ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp SCCSCCGG---GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CcccCchh---hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 99997433 7889999999999999999876 66799999999999999986
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.38 E-value=8.7e-13 Score=137.29 Aligned_cols=144 Identities=20% Similarity=0.289 Sum_probs=122.1
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
..+..+++.++.+.+... +..+++|+.|+|++|.+++.++ +..+++|++|+|++|.+++. +.+..+++|+.|+|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~ 274 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGS 274 (347)
T ss_dssp TTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCS
T ss_pred CccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccC
Confidence 467889999998887655 8899999999999999998766 88999999999999999874 5689999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC-cccCCCCCCCCCCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP-AWMSPFGGSSFAGN 218 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip-~~~~~~~~~~~~gn 218 (640)
|++++ +| .+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..| ..+..+....+.+|
T Consensus 275 n~l~~-~~--~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 275 NQISD-IS--VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQ 343 (347)
T ss_dssp SCCCC-CG--GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC
T ss_pred CccCC-Ch--hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhh
Confidence 99986 44 57889999999999999999998888899999999999999998877 22333333444444
No 371
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.37 E-value=7.8e-13 Score=146.02 Aligned_cols=124 Identities=21% Similarity=0.225 Sum_probs=92.1
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|++|.+++.+. +.. +|+.|+|++|.|++.+. .+++|+.|+|++|.|++ +|. .+++|+.|+|++
T Consensus 100 ~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 100 ASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTMLPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRN 169 (571)
T ss_dssp TTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCCCCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCC
Confidence 467778888888887544 544 88899999998888554 67888888888888886 665 578888888888
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCC-------cEEEcccCcCcccCCcccCCCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSI-------LDFNVSNNQLSGQIPAWMSPFG 211 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L-------~~l~ls~N~l~g~ip~~~~~~~ 211 (640)
|+|++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .||..+..+.
T Consensus 170 N~L~~-lp~--l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~ 230 (571)
T 3cvr_A 170 NQLTF-LPE--LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLD 230 (571)
T ss_dssp SCCSC-CCC--CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSC
T ss_pred CCCCC-cch--hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCC
Confidence 88886 773 54 78888888888888 5555 432 66 88888888888 5777665443
No 372
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.37 E-value=9.3e-13 Score=123.08 Aligned_cols=115 Identities=20% Similarity=0.194 Sum_probs=98.2
Q ss_pred hhccCCCCCCEEeCCCCcCCCCCCCCCCCC-CCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCC
Q 006559 85 EVLSRLTQLRLLSLKNNLLSSSNLNLSSWP-HLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLP 163 (640)
Q Consensus 85 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~ 163 (640)
..+.++++|+.|+|++|.++.. +.+..+. +|++|+|++|.|++. ..+..+++|+.|+|++|.+++ +|+..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCC
Confidence 3467789999999999999976 5566665 999999999999986 679999999999999999995 5645568999
Q ss_pred CCcEEEccCCcceecccC--CcCCCCCCcEEEcccCcCcccCCc
Q 006559 164 NLLTLRLEDNRFTGTLYS--VNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 164 ~L~~L~L~~N~l~g~~~~--~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
+|++|+|++|+++. +|. .+..+++|+.|++++|.++ .+|.
T Consensus 89 ~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~ 130 (176)
T 1a9n_A 89 DLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKH 130 (176)
T ss_dssp TCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTT
T ss_pred CCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHh
Confidence 99999999999964 554 6778999999999999998 4555
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.37 E-value=1.8e-12 Score=140.12 Aligned_cols=126 Identities=20% Similarity=0.119 Sum_probs=87.5
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
.+..|++.++...+.. .+..+++|+.|+|++|.+++.+ +..+++|+.|++++|++++. .++.+++|+.|+|++|
T Consensus 149 ~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N 222 (457)
T 3bz5_A 149 QLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSN 222 (457)
T ss_dssp TCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCCCCCC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSS
T ss_pred cCCEEECCCCCccccc-ccccCCcCCEEECCCCccceec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCC
Confidence 5677777777555544 4677788888888888887753 67777788888888887764 3777778888888888
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCC-------CCcEEEcccCcCcccCC
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSR-------SILDFNVSNNQLSGQIP 204 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~-------~L~~l~ls~N~l~g~ip 204 (640)
++++ +| +..+++|+.|++++|+|++..+..+..+. +|+.|++++|.+.|.+|
T Consensus 223 ~l~~-ip---~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 223 KLTE-ID---VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp CCSC-CC---CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred cccc-cC---ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 8776 55 56777788888888877776544443333 44555566666666655
No 374
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.36 E-value=1.8e-15 Score=144.53 Aligned_cols=131 Identities=21% Similarity=0.236 Sum_probs=109.4
Q ss_pred EEEEEeCCCCCCCCc-------hhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCE
Q 006559 70 VIKLVLEDLDLTGPA-------EVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRR 142 (640)
Q Consensus 70 v~~l~l~~~~l~g~~-------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 142 (640)
++.+++..+.++|.. ..+..+++|+.|+|++|.+++.+ .+..+++|++|+|++|.++ .+|..+..+++|+.
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~ 97 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEE 97 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSE
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCE
Confidence 444444444555432 37889999999999999999865 8889999999999999998 68888888899999
Q ss_pred EEcccCCCCCCCCchhcCCCCCCcEEEccCCcceeccc-CCcCCCCCCcEEEcccCcCcccCCc
Q 006559 143 VDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLY-SVNSSSRSILDFNVSNNQLSGQIPA 205 (640)
Q Consensus 143 L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~-~~~~~~~~L~~l~ls~N~l~g~ip~ 205 (640)
|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|+.|++++|.+++.+|.
T Consensus 98 L~L~~N~l~~-l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 98 LWISYNQIAS-LS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEEEEEECCC-HH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred EECcCCcCCc-CC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999999996 55 57889999999999999997443 4677899999999999999988775
No 375
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=2e-12 Score=134.59 Aligned_cols=106 Identities=18% Similarity=0.209 Sum_probs=95.0
Q ss_pred EEeCCCC-cCCCCCCCCCCCCCCcEEEccc-ccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccC
Q 006559 95 LLSLKNN-LLSSSNLNLSSWPHLKHLYLSH-NRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLED 172 (640)
Q Consensus 95 ~L~Ls~N-~l~~~~~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~ 172 (640)
.+++++| .|++.|. +..+++|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++..| ..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP-DAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT-TGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH-HHhcCCcCCCEEeCCC
Confidence 4688888 8999877 99999999999996 99999888999999999999999999998655 7899999999999999
Q ss_pred CcceecccCCcCCCCCCcEEEcccCcCcccC
Q 006559 173 NRFTGTLYSVNSSSRSILDFNVSNNQLSGQI 203 (640)
Q Consensus 173 N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~i 203 (640)
|+|++.++..+..+. |+.|+|++|.|...-
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 999987777776665 999999999998653
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.34 E-value=7.8e-12 Score=135.18 Aligned_cols=123 Identities=20% Similarity=0.190 Sum_probs=91.3
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|+++.+++.. ++.+++|+.|+|++|.+++. .++.+++|++|++++|.+.+.+ .++.+++|+.|+|++
T Consensus 106 ~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp TTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CcCCEEECCCCcCCeec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 46788999999988853 88899999999999999885 3777778888888888666665 366777777777777
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
|++++ +| +..+++|+.|++++|++++. .+..+++|+.|++++|+|++ +|
T Consensus 180 n~l~~-l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 180 NKITE-LD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp SCCCC-CC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC
T ss_pred Cccce-ec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC
Confidence 77775 44 56667777777777777764 25556777777777777776 44
No 377
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.32 E-value=1.3e-11 Score=133.31 Aligned_cols=120 Identities=23% Similarity=0.357 Sum_probs=73.2
Q ss_pred cEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccC
Q 006559 69 RVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHN 148 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 148 (640)
.+..|+++++.+++.... .++|++|+|++|.+++.+ .+..+++|++|++++|++++ +|..+ .+|+.|+|++|
T Consensus 112 ~L~~L~l~~n~l~~l~~~---~~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n 183 (454)
T 1jl5_A 112 SLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNN 183 (454)
T ss_dssp TCCEEECCSSCCSCCCSC---CTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSS
T ss_pred CCcEEECCCCccCcccCC---CCCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCC
Confidence 455556666555542211 156777777777777643 57777777777777777765 45432 46677777777
Q ss_pred CCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCC
Q 006559 149 AYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 149 ~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip 204 (640)
++++ +| .+.++++|++|++++|++++ +|.. ..+|+.|++++|+++ .+|
T Consensus 184 ~l~~-l~--~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 184 QLEE-LP--ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CCSS-CC--CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC
T ss_pred cCCc-Cc--cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc
Confidence 7765 45 36666777777777776665 3322 235666666666666 455
No 378
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.31 E-value=3.4e-12 Score=133.12 Aligned_cols=147 Identities=16% Similarity=0.135 Sum_probs=105.7
Q ss_pred CCCCCCceEecCC---------CCcEEEEEeCCCCCCCCc-hhccCCCCCCEEeCCCCcCCCCCC--CCCCCCCCcE-EE
Q 006559 54 CFDSWRGVTCNPS---------THRVIKLVLEDLDLTGPA-EVLSRLTQLRLLSLKNNLLSSSNL--NLSSWPHLKH-LY 120 (640)
Q Consensus 54 c~~~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~-~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~-L~ 120 (640)
|.|+|+.|.|+.. ...++.|+|++|.++..+ ..|.+|++|+.|+|++|.+.+..+ .|.++++|.. ++
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 6679999999753 135788899998888755 568889999999999998866433 4778887764 66
Q ss_pred cccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccC-CcceecccCCcCCCC-CCcEEEcccCc
Q 006559 121 LSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLED-NRFTGTLYSVNSSSR-SILDFNVSNNQ 198 (640)
Q Consensus 121 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~-N~l~g~~~~~~~~~~-~L~~l~ls~N~ 198 (640)
+++|+++...|..|.++++|+.|+|++|++++ +|...+....++..|++.+ |++....+..+..+. .++.|+|++|+
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSS-CCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhcccccccccccccccc-CCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 77788888888888899999999999998885 4434455555666777654 455544444444443 46667777777
Q ss_pred Ccc
Q 006559 199 LSG 201 (640)
Q Consensus 199 l~g 201 (640)
|+.
T Consensus 166 i~~ 168 (350)
T 4ay9_X 166 IQE 168 (350)
T ss_dssp CCE
T ss_pred ccC
Confidence 763
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.30 E-value=1.5e-13 Score=142.47 Aligned_cols=145 Identities=19% Similarity=0.211 Sum_probs=110.8
Q ss_pred CCCceEecCCCCcEEEEEeCCCCCCCCchhccCC--CCCCEEeCCCCcCCCCCCCCCCCCCCcEEEccccccccc-CCcc
Q 006559 57 SWRGVTCNPSTHRVIKLVLEDLDLTGPAEVLSRL--TQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGT-FPSG 133 (640)
Q Consensus 57 ~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~-~p~~ 133 (640)
.|.++.|++. .+..++++++.+. ...+..+ ++|+.|+|++|.+.+..+.+..+++|++|+|++|.+++. +|..
T Consensus 38 ~W~~~~~~~~--~~~~l~l~~~~~~--~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~ 113 (336)
T 2ast_B 38 RWYRLASDES--LWQTLDLTGKNLH--PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGI 113 (336)
T ss_dssp HHHHHHTCST--TSSEEECTTCBCC--HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHH
T ss_pred HHHHHhcCch--hheeeccccccCC--HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHH
Confidence 7888888753 4667788877766 3445556 788888888888888777777788888888888888766 7777
Q ss_pred CCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCC-cceec-ccCCcCCCCCCcEEEcccC-cCccc-CCcc
Q 006559 134 VSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDN-RFTGT-LYSVNSSSRSILDFNVSNN-QLSGQ-IPAW 206 (640)
Q Consensus 134 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N-~l~g~-~~~~~~~~~~L~~l~ls~N-~l~g~-ip~~ 206 (640)
+..+++|+.|+|++|.+++..| ..+..+++|++|+|++| .+++. ++..+..+++|+.|++++| ++++. +|..
T Consensus 114 ~~~~~~L~~L~L~~~~l~~~~~-~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 114 LSQCSKLQNLSLEGLRLSDPIV-NTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HTTBCCCSEEECTTCBCCHHHH-HHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HhhCCCCCEEeCcCcccCHHHH-HHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 8888888888888888876666 56778888888888888 67763 5666667788888888888 88754 4443
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.28 E-value=2.4e-11 Score=131.17 Aligned_cols=135 Identities=21% Similarity=0.222 Sum_probs=101.0
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+++++.+++.+. .+++|+.|+|++|.+++.+.. .++|++|+|++|.+++ +| .|+++++|++|+|++
T Consensus 91 ~~L~~L~l~~n~l~~lp~---~~~~L~~L~l~~n~l~~l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~ 162 (454)
T 1jl5_A 91 PHLESLVASCNSLTELPE---LPQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDN 162 (454)
T ss_dssp TTCSEEECCSSCCSSCCC---CCTTCCEEECCSSCCSCCCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEEccCCcCCcccc---ccCCCcEEECCCCccCcccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCC
Confidence 367788888888887443 247888888888888775321 1689999999999987 77 588999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCCCCCCCCC
Q 006559 148 NAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFGGSSFAGN 218 (640)
Q Consensus 148 N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn 218 (640)
|++++ +| .. .++|++|+|++|++++ +| .+..+++|+.|++++|++++ +|.....+....+.+|
T Consensus 163 N~l~~-lp-~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n 225 (454)
T 1jl5_A 163 NSLKK-LP-DL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNN 225 (454)
T ss_dssp SCCSC-CC-CC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSS
T ss_pred CcCcc-cC-CC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCC
Confidence 99985 66 32 3589999999999987 45 57788999999999999986 5554444433333344
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.26 E-value=1.2e-11 Score=138.11 Aligned_cols=64 Identities=25% Similarity=0.362 Sum_probs=40.6
Q ss_pred CCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCcCcccCCcccCCCC
Q 006559 138 RHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLSGQIPAWMSPFG 211 (640)
Q Consensus 138 ~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~ 211 (640)
++|+.|+|++|++++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp----~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~ 284 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP----VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLS 284 (622)
T ss_dssp TTCCEEECCSSCCSC-CC----CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSC
T ss_pred CCCCEEEccCCccCc-CC----CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhcc
Confidence 566777777777764 55 345667777777777763 333 3566777777777777 5666554443
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.25 E-value=4.1e-12 Score=141.96 Aligned_cols=137 Identities=23% Similarity=0.287 Sum_probs=86.6
Q ss_pred CCCCCCCCCCCCCCCceEec------CCCCcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcE
Q 006559 45 SSWVNSTDPCFDSWRGVTCN------PSTHRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKH 118 (640)
Q Consensus 45 ~sW~~~~~~c~~~w~gv~C~------~~~~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~ 118 (640)
.+|....++| .|+|..|. .....+..|++++++++..+..+. ++|+.|+|++|.|+..+. .+++|++
T Consensus 13 ~~W~~~~~~~--~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~ 85 (622)
T 3g06_A 13 SAWRRAAPAE--ESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRT 85 (622)
T ss_dssp HHHHHTCCGG--GHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCE
T ss_pred HHHHhcCCcc--hhccccccCcccccccCCCCcEEEecCCCcCccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCE
Confidence 3574344444 78664321 111246778888888775544343 678888888888776544 4677788
Q ss_pred EEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccCc
Q 006559 119 LYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQ 198 (640)
Q Consensus 119 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~ 198 (640)
|+|++|+|++ +|. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|.. +++|+.|+|++|+
T Consensus 86 L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 86 LEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQ 152 (622)
T ss_dssp EEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred EEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCc
Confidence 8888887764 554 56777777777777774 552 45667777777777665 3332 3566666777766
Q ss_pred Ccc
Q 006559 199 LSG 201 (640)
Q Consensus 199 l~g 201 (640)
|++
T Consensus 153 l~~ 155 (622)
T 3g06_A 153 LAS 155 (622)
T ss_dssp CSC
T ss_pred CCC
Confidence 664
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.21 E-value=1.9e-12 Score=137.01 Aligned_cols=139 Identities=20% Similarity=0.279 Sum_probs=109.8
Q ss_pred CcEEEEEeCCCCCCCC-----chhccCC---------CCCCEEeCCCCcCCC-CCC----CCCCCCCCcEEEccccccc-
Q 006559 68 HRVIKLVLEDLDLTGP-----AEVLSRL---------TQLRLLSLKNNLLSS-SNL----NLSSWPHLKHLYLSHNRFT- 127 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~-----~~~l~~l---------~~L~~L~Ls~N~l~~-~~~----~~~~l~~L~~L~Ls~N~l~- 127 (640)
.++..|+|++|.++.. ...+..+ ++|+.|+|++|.++. ..+ .+..+++|++|+|++|.++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 4688899999998642 2445555 899999999999973 222 3567889999999999997
Q ss_pred -c---cCCccCCCCCCCCEEEcccCCCC----CCCCchhcCCCCCCcEEEccCCcceec----ccCCc--CCCCCCcEEE
Q 006559 128 -G---TFPSGVSSLRHLRRVDLSHNAYE----GEIPMTELTRLPNLLTLRLEDNRFTGT----LYSVN--SSSRSILDFN 193 (640)
Q Consensus 128 -g---~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~~l~~L~~L~L~~N~l~g~----~~~~~--~~~~~L~~l~ 193 (640)
| .+|..+..+++|+.|+|++|.++ +.+| ..+..+++|++|+|++|.+++. ++..+ ..+++|+.|+
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~-~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA-IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH-HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHH-HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 3 45557888999999999999996 5666 5788899999999999999876 45555 3388899999
Q ss_pred cccCcCcc----cCCccc
Q 006559 194 VSNNQLSG----QIPAWM 207 (640)
Q Consensus 194 ls~N~l~g----~ip~~~ 207 (640)
|++|.|++ .+|..+
T Consensus 281 L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 281 LQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp CCSSCCBHHHHHHHHHHH
T ss_pred CcCCcCCHHHHHHHHHHH
Confidence 99999998 577655
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.20 E-value=4.5e-13 Score=138.73 Aligned_cols=137 Identities=20% Similarity=0.210 Sum_probs=95.0
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCC--CCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSS--NLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDL 145 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~--~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 145 (640)
..+..+++.++.+++....+..+++|+.|+|++|.+++. +..+..+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 357777888887777766667778888888888877653 224667778888888888877777777777788888888
Q ss_pred ccC-CCCCC-CCchhcCCCCCCcEEEccCC-cceec-ccCCcCCCC-CCcEEEcccC--cCc-ccCCc
Q 006559 146 SHN-AYEGE-IPMTELTRLPNLLTLRLEDN-RFTGT-LYSVNSSSR-SILDFNVSNN--QLS-GQIPA 205 (640)
Q Consensus 146 s~N-~l~g~-~p~~~~~~l~~L~~L~L~~N-~l~g~-~~~~~~~~~-~L~~l~ls~N--~l~-g~ip~ 205 (640)
++| .+++. +| ..+.++++|++|+|++| .+++. ++..+..++ +|+.|++++| .++ +.+|.
T Consensus 150 ~~~~~l~~~~l~-~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~ 216 (336)
T 2ast_B 150 SGCSGFSEFALQ-TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST 216 (336)
T ss_dssp TTCBSCCHHHHH-HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHH
T ss_pred CCCCCCCHHHHH-HHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHH
Confidence 877 56642 44 44666777777777777 77654 455555566 7777777777 444 34443
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.17 E-value=1.3e-13 Score=131.52 Aligned_cols=127 Identities=21% Similarity=0.253 Sum_probs=108.3
Q ss_pred CcEEEEEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEccc
Q 006559 68 HRVIKLVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSH 147 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 147 (640)
.++..|+|+++.+++.+ .+..+++|+.|+|++|.++..+..+..+++|++|+|++|.+++ +| .+..+++|+.|+|++
T Consensus 48 ~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~ 124 (198)
T 1ds9_A 48 KACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSN 124 (198)
T ss_dssp TTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESE
T ss_pred CCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCC
Confidence 36889999999998855 8899999999999999999766556677999999999999997 45 688999999999999
Q ss_pred CCCCCCCCc-hhcCCCCCCcEEEccCCcceecccCC----------cCCCCCCcEEEcccCcCc
Q 006559 148 NAYEGEIPM-TELTRLPNLLTLRLEDNRFTGTLYSV----------NSSSRSILDFNVSNNQLS 200 (640)
Q Consensus 148 N~l~g~~p~-~~~~~l~~L~~L~L~~N~l~g~~~~~----------~~~~~~L~~l~ls~N~l~ 200 (640)
|++++ +|. ..+..+++|++|++++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 125 N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 125 NKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CcCCc-hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 99985 332 46899999999999999999987763 66788999887 66665
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.13 E-value=1.4e-12 Score=137.90 Aligned_cols=133 Identities=26% Similarity=0.338 Sum_probs=67.6
Q ss_pred cEEEEEeCCCCCCCC-----chhccCCCCCCEEeCCCCcCCCCCC-C----CCCC---------CCCcEEEccccccc-c
Q 006559 69 RVIKLVLEDLDLTGP-----AEVLSRLTQLRLLSLKNNLLSSSNL-N----LSSW---------PHLKHLYLSHNRFT-G 128 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~-----~~~l~~l~~L~~L~Ls~N~l~~~~~-~----~~~l---------~~L~~L~Ls~N~l~-g 128 (640)
++..|+|++|.+++. +..+..+++|+.|+|++|.+++..+ . +..+ ++|++|+|++|+++ +
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~ 174 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 174 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH
Confidence 455555555555542 2344555555555555555543211 1 1222 55566666666554 2
Q ss_pred cCC---ccCCCCCCCCEEEcccCCCC--C---CCCchhcCCCCCCcEEEccCCcce----ecccCCcCCCCCCcEEEccc
Q 006559 129 TFP---SGVSSLRHLRRVDLSHNAYE--G---EIPMTELTRLPNLLTLRLEDNRFT----GTLYSVNSSSRSILDFNVSN 196 (640)
Q Consensus 129 ~~p---~~~~~l~~L~~L~Ls~N~l~--g---~~p~~~~~~l~~L~~L~L~~N~l~----g~~~~~~~~~~~L~~l~ls~ 196 (640)
.+| ..+..+++|+.|+|++|.++ | .+| ..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++
T Consensus 175 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~-~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 175 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLL-EGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHH-TTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHH-HHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 333 23445556666666666554 1 111 24455556666666666654 44555555555666666666
Q ss_pred CcCccc
Q 006559 197 NQLSGQ 202 (640)
Q Consensus 197 N~l~g~ 202 (640)
|.|++.
T Consensus 254 n~i~~~ 259 (386)
T 2ca6_A 254 CLLSAR 259 (386)
T ss_dssp CCCCHH
T ss_pred CCCchh
Confidence 665544
No 387
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.12 E-value=2.6e-10 Score=113.51 Aligned_cols=134 Identities=15% Similarity=0.098 Sum_probs=103.4
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccc--cchHHHHHHHHHHhccC-CCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRER--KKKREVDEWLRVIGGLR-HSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
..++.|+++.||++... +..+++|..... .....+.+|+++++.+. |..+.++++++...+..|+||||+++.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677778899998754 678999998753 22345778888888774 677888999998888999999999999998
Q ss_pred HhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC-------------------------------------------
Q 006559 416 SLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN------------------------------------------- 452 (640)
Q Consensus 416 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------- 452 (640)
+.+... .....++.+++++|..||+..
T Consensus 99 ~~~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCTT----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCCc----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 764211 123467889999999999711
Q ss_pred -------------CCCceecCCCCCCeEECCCCCeEEccCCccc
Q 006559 453 -------------KAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483 (640)
Q Consensus 453 -------------~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~ 483 (640)
...++|+|+++.|||++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1448999999999999876666799998764
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.10 E-value=5.4e-12 Score=132.24 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=88.9
Q ss_pred cEEEEEeCCCCCCCCc-----hhccCCC-CCCEEeCCCCcCCCCCC-CCCCC-----CCCcEEEcccccccccCCccCC-
Q 006559 69 RVIKLVLEDLDLTGPA-----EVLSRLT-QLRLLSLKNNLLSSSNL-NLSSW-----PHLKHLYLSHNRFTGTFPSGVS- 135 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-----~~l~~l~-~L~~L~Ls~N~l~~~~~-~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~- 135 (640)
.++.|+|+++.+++.. ..+..++ +|+.|+|++|.+++..+ .+..+ ++|++|+|++|.+++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 4777888887777653 5567777 78888888887776543 23332 7788888888888766655433
Q ss_pred ---CC-CCCCEEEcccCCCCCCCCchh----cCC-CCCCcEEEccCCcceec----ccCCcCCCC-CCcEEEcccCcCcc
Q 006559 136 ---SL-RHLRRVDLSHNAYEGEIPMTE----LTR-LPNLLTLRLEDNRFTGT----LYSVNSSSR-SILDFNVSNNQLSG 201 (640)
Q Consensus 136 ---~l-~~L~~L~Ls~N~l~g~~p~~~----~~~-l~~L~~L~L~~N~l~g~----~~~~~~~~~-~L~~l~ls~N~l~g 201 (640)
.+ ++|+.|+|++|.+++..+ .. +.. .++|++|+|++|++++. ++..+.... +|+.|+|++|+|++
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~-~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSS-SEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCH-HHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHH-HHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 33 778888888888764332 33 233 25788888888887743 223333343 78888888888776
Q ss_pred cCCc
Q 006559 202 QIPA 205 (640)
Q Consensus 202 ~ip~ 205 (640)
..+.
T Consensus 182 ~~~~ 185 (362)
T 3goz_A 182 KNCA 185 (362)
T ss_dssp SCHH
T ss_pred hhHH
Confidence 6554
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.10 E-value=6.9e-12 Score=131.42 Aligned_cols=131 Identities=22% Similarity=0.186 Sum_probs=104.8
Q ss_pred EEeCCCCCCCCchhccC-CCCCCEEeCCCCcCCCCCC-----CCCCCC-CCcEEEcccccccccCCccCCCC-----CCC
Q 006559 73 LVLEDLDLTGPAEVLSR-LTQLRLLSLKNNLLSSSNL-----NLSSWP-HLKHLYLSHNRFTGTFPSGVSSL-----RHL 140 (640)
Q Consensus 73 l~l~~~~l~g~~~~l~~-l~~L~~L~Ls~N~l~~~~~-----~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L 140 (640)
.+|+.++++|+.+.+.. .++|+.|+|++|.+++..+ .+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 56788899998755544 4559999999999988764 466788 89999999999998888777665 999
Q ss_pred CEEEcccCCCCCCCCchh----cCCC-CCCcEEEccCCcceecccCCc----CC-CCCCcEEEcccCcCcccCC
Q 006559 141 RRVDLSHNAYEGEIPMTE----LTRL-PNLLTLRLEDNRFTGTLYSVN----SS-SRSILDFNVSNNQLSGQIP 204 (640)
Q Consensus 141 ~~L~Ls~N~l~g~~p~~~----~~~l-~~L~~L~L~~N~l~g~~~~~~----~~-~~~L~~l~ls~N~l~g~ip 204 (640)
+.|+|++|.+++..+ .. +..+ ++|++|+|++|++++..+..+ .. ..+|+.|+|++|+|++..+
T Consensus 83 ~~L~Ls~n~l~~~~~-~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 83 TSLNLSGNFLSYKSS-DELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp CEEECCSSCGGGSCH-HHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred cEEECcCCcCChHHH-HHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 999999999986554 43 3444 899999999999987665443 23 3699999999999996443
No 390
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=3.1e-10 Score=112.64 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=96.2
Q ss_pred cccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCCc--ccceeEEEEcCCeEEEEEeccCCCCHHHhhc
Q 006559 342 GKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSN--IVSIRAYCNGKDELFLVYDYLPHGSLHSLLH 419 (640)
Q Consensus 342 G~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~ 419 (640)
+.|..+.||++...+|..+++|..... ....+..|+++++.+.+.+ +.+++++....+..++||||+++.+|. ..
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~ 105 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS 105 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC
Confidence 355568999998877888999987654 3345677888888776544 456888888878899999999998884 22
Q ss_pred cCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------------------
Q 006559 420 GSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN----------------------------------------------- 452 (640)
Q Consensus 420 ~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------------- 452 (640)
. .+ ...++.++++.|..||...
T Consensus 106 ~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (264)
T 1nd4_A 106 H--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL 174 (264)
T ss_dssp C--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred c--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHH
Confidence 1 11 2256778888888888642
Q ss_pred --------CCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 453 --------KAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 453 --------~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
...++|+|++|.|||+++++.+.|+|||.+..
T Consensus 175 ~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 175 KARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12299999999999998876677999998753
No 391
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.99 E-value=9.5e-10 Score=114.51 Aligned_cols=126 Identities=15% Similarity=0.097 Sum_probs=100.1
Q ss_pred EEeCCCCCCCCchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCc-cCCCCCCCCE-EEcccCC
Q 006559 73 LVLEDLDLTGPAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPS-GVSSLRHLRR-VDLSHNA 149 (640)
Q Consensus 73 l~l~~~~l~g~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~-L~Ls~N~ 149 (640)
++.++++|+..+..+ .++|+.|+|++|+|+..++ .|.++++|++|+|++|++.+.+|. .|.++++|+. +++++|+
T Consensus 14 v~C~~~~Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~ 91 (350)
T 4ay9_X 14 FLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 91 (350)
T ss_dssp EEEESTTCCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETT
T ss_pred EEecCCCCCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCc
Confidence 466777887655444 3689999999999998776 589999999999999998877765 6788988775 6677899
Q ss_pred CCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEccc-CcCcc
Q 006559 150 YEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSN-NQLSG 201 (640)
Q Consensus 150 l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~-N~l~g 201 (640)
++. +|+..|..+++|++|++++|++++..+..+....++..|++++ |++..
T Consensus 92 l~~-l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~ 143 (350)
T 4ay9_X 92 LLY-INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT 143 (350)
T ss_dssp CCE-ECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCE
T ss_pred ccc-cCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccc
Confidence 985 5547889999999999999999987777776677788888876 45553
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=1.8e-09 Score=112.70 Aligned_cols=138 Identities=17% Similarity=0.291 Sum_probs=102.9
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEec--ccc---chHHHHHHHHHHhccC--CCcccceeEEEEcC---CeEEEEEec
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIR--ERK---KKREVDEWLRVIGGLR--HSNIVSIRAYCNGK---DELFLVYDY 408 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~--~~~---~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lV~Ey 408 (640)
+.|+.|.++.||+....+ ..+++|+.. ... ....+.+|.++++.+. +..+.++++++.+. +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 458899999999998765 567788776 331 2345778888888876 45578889888766 458999999
Q ss_pred cCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCC------------------------------------
Q 006559 409 LPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYN------------------------------------ 452 (640)
Q Consensus 409 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------ 452 (640)
+++..+.+... ..++...+..++.++++.|..||...
T Consensus 123 v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99877743211 13567788889999999999999731
Q ss_pred -------------------CCCceecCCCCCCeEECCCCC--eEEccCCcccc
Q 006559 453 -------------------KAHLFHGHLSSSNIVVDQLGN--ACISDIGVHQL 484 (640)
Q Consensus 453 -------------------~~~ivHrdlk~~NILl~~~~~--~kl~DfGl~~~ 484 (640)
...++|+|+++.|||++.++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999998765
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.94 E-value=1.7e-11 Score=132.61 Aligned_cols=138 Identities=16% Similarity=0.137 Sum_probs=80.9
Q ss_pred cEEEEEeCCCCCCCCc------hhccCCCCCCEEeCCCCcCCCC-----CCCCCCCCCCcEEEcccccccccCCccCC--
Q 006559 69 RVIKLVLEDLDLTGPA------EVLSRLTQLRLLSLKNNLLSSS-----NLNLSSWPHLKHLYLSHNRFTGTFPSGVS-- 135 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~------~~l~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-- 135 (640)
.+..|+|+++.++... ..+..+++|+.|+|++|.+++. +..+..+++|++|+|++|.+++..+..+.
T Consensus 228 ~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 307 (461)
T 1z7x_W 228 SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET 307 (461)
T ss_dssp TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH
T ss_pred CccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHH
Confidence 5667777777665421 1223567777777777777652 22345567777777777777543332222
Q ss_pred ---CCCCCCEEEcccCCCCCC----CCchhcCCCCCCcEEEccCCcceecccCCcC-----CCCCCcEEEcccCcCcc--
Q 006559 136 ---SLRHLRRVDLSHNAYEGE----IPMTELTRLPNLLTLRLEDNRFTGTLYSVNS-----SSRSILDFNVSNNQLSG-- 201 (640)
Q Consensus 136 ---~l~~L~~L~Ls~N~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~-----~~~~L~~l~ls~N~l~g-- 201 (640)
..++|+.|+|++|.+++. +| ..+..+++|++|+|++|.+++..+..+. ..++|+.|++++|++++
T Consensus 308 l~~~~~~L~~L~L~~n~l~~~~~~~l~-~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 308 LLEPGCQLESLWVKSCSFTAACCSHFS-SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHH-HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred hccCCccceeeEcCCCCCchHHHHHHH-HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 235677777777776643 23 3445566777777777776654333221 14567777777777765
Q ss_pred --cCCccc
Q 006559 202 --QIPAWM 207 (640)
Q Consensus 202 --~ip~~~ 207 (640)
.+|..+
T Consensus 387 ~~~l~~~l 394 (461)
T 1z7x_W 387 CSSLAATL 394 (461)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 555443
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.86 E-value=4.9e-11 Score=128.98 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=78.4
Q ss_pred cEEEEEeCCCCCCCCc-hhc-----cCCCCCCEEeCCCCcCCCC-----CCCCCCCCCCcEEEcccccccccC-----Cc
Q 006559 69 RVIKLVLEDLDLTGPA-EVL-----SRLTQLRLLSLKNNLLSSS-----NLNLSSWPHLKHLYLSHNRFTGTF-----PS 132 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l-----~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~g~~-----p~ 132 (640)
.+..|+|+++.++... ..+ ..+++|+.|+|++|.+++. +..+..+++|++|+|++|.+++.. +.
T Consensus 171 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 250 (461)
T 1z7x_W 171 DFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPG 250 (461)
T ss_dssp TCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHH
T ss_pred CCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHH
Confidence 5677777777665421 112 1355777777777777653 123455677777777777766432 22
Q ss_pred cCCCCCCCCEEEcccCCCCCC----CCchhcCCCCCCcEEEccCCcceecccCCc-----CCCCCCcEEEcccCcCccc
Q 006559 133 GVSSLRHLRRVDLSHNAYEGE----IPMTELTRLPNLLTLRLEDNRFTGTLYSVN-----SSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 133 ~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~-----~~~~~L~~l~ls~N~l~g~ 202 (640)
.+..+++|+.|+|++|.+++. ++ ..+..+++|++|+|++|.+++..+..+ ...++|+.|++++|.+++.
T Consensus 251 ~~~~~~~L~~L~L~~n~l~~~~~~~l~-~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 328 (461)
T 1z7x_W 251 LLHPSSRLRTLWIWECGITAKGCGDLC-RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328 (461)
T ss_dssp HTSTTCCCCEEECTTSCCCHHHHHHHH-HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred HhcCCCCceEEECcCCCCCHHHHHHHH-HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchH
Confidence 333567777777777777642 34 345556777777777777654332221 1224666777777766654
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.83 E-value=2.2e-11 Score=120.64 Aligned_cols=144 Identities=16% Similarity=0.186 Sum_probs=71.2
Q ss_pred CCCceEecCCCCcEEEEEeCCC---CCCCCc--hhccCCCCCCEEeCCCCcCCCCC--CCCCCCCCCcE--EEccccc--
Q 006559 57 SWRGVTCNPSTHRVIKLVLEDL---DLTGPA--EVLSRLTQLRLLSLKNNLLSSSN--LNLSSWPHLKH--LYLSHNR-- 125 (640)
Q Consensus 57 ~w~gv~C~~~~~~v~~l~l~~~---~l~g~~--~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~--L~Ls~N~-- 125 (640)
+|.|+.|++...+|+.+...+. .+.+.. +.+..|+. .|+..+|..++.. ..+...+.|.. ++++.|.
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 7999999987667766666542 222221 22222211 1122222222210 01333344444 5555552
Q ss_pred -ccccCCccCCCCCCCCEEEcccCCCCC--CCCchhcCCCCCCcEEEccCCcceecc-cCCcCCCCCCcEEEcccCcCcc
Q 006559 126 -FTGTFPSGVSSLRHLRRVDLSHNAYEG--EIPMTELTRLPNLLTLRLEDNRFTGTL-YSVNSSSRSILDFNVSNNQLSG 201 (640)
Q Consensus 126 -l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~~l~~L~~L~L~~N~l~g~~-~~~~~~~~~L~~l~ls~N~l~g 201 (640)
+.+.++....++++|+.|+|++|+|++ .+| ..+..+++|+.|+|++|+|++.- ...+..+ +|+.|+|++|.+++
T Consensus 157 ~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~-~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 157 CMAATLRIIEENIPELLSLNLSNNRLYRLDDMS-SIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCD 234 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGT-THHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGG
T ss_pred HHHHHHHHHHhhCCCCCEEECCCCCCCCCccch-hHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCcc
Confidence 222222222456666666666666665 333 34456666666666666666541 1112222 66667777777666
Q ss_pred cCC
Q 006559 202 QIP 204 (640)
Q Consensus 202 ~ip 204 (640)
.+|
T Consensus 235 ~~~ 237 (267)
T 3rw6_A 235 TFR 237 (267)
T ss_dssp GCS
T ss_pred ccC
Confidence 655
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.83 E-value=1.4e-10 Score=121.74 Aligned_cols=133 Identities=22% Similarity=0.253 Sum_probs=79.5
Q ss_pred cEEEEEeCCCCCCCCc--hhccCCCCCCEEeCCCCcCCCCCC-CC-----CCCCCCcEEEcccccccc----cCCccCCC
Q 006559 69 RVIKLVLEDLDLTGPA--EVLSRLTQLRLLSLKNNLLSSSNL-NL-----SSWPHLKHLYLSHNRFTG----TFPSGVSS 136 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~--~~l~~l~~L~~L~Ls~N~l~~~~~-~~-----~~l~~L~~L~Ls~N~l~g----~~p~~~~~ 136 (640)
.+..|+|++|.++... .....+++|+.|+|++|.|+.... .+ ...++|++|+|++|.|+. .++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 5777777777665321 222344567777777777754321 11 245667777777777754 23344456
Q ss_pred CCCCCEEEcccCCCCCC----CCchhcCCCCCCcEEEccCCcceec----ccCCcCCCCCCcEEEcccCcCccc
Q 006559 137 LRHLRRVDLSHNAYEGE----IPMTELTRLPNLLTLRLEDNRFTGT----LYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 137 l~~L~~L~Ls~N~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
+++|++|||++|.+++. ++ ..+...++|+.|+|++|.|+.. ++..+...++|+.|+|++|.|+..
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~-~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLA-AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHH-HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CCCcCEEeCCCCCCCcHHHHHHH-HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 67777777777777531 11 3345566777777777777643 233334456677777777777644
No 397
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.75 E-value=5.2e-09 Score=106.59 Aligned_cols=187 Identities=18% Similarity=0.154 Sum_probs=115.9
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccC-CCc--ccceeEEEEcCC---eEEEEEeccCCC
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLR-HSN--IVSIRAYCNGKD---ELFLVYDYLPHG 412 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lV~Ey~~~g 412 (640)
+.++.|.+..||++. ..+++|+.........+..|.++++.+. +.. +.+.+......+ ..|+||||+++.
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~ 101 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV 101 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence 357889999999863 5678888665444566788888888773 333 334444433322 358999999998
Q ss_pred CHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 006559 413 SLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGY----------------------------------------- 451 (640)
Q Consensus 413 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------- 451 (640)
.+.+.... .++..++..++.++++.|..||..
T Consensus 102 ~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 102 PLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp ECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred ECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 87653221 245566677777777777777751
Q ss_pred --------------CCCCceecCCCCCCeEECC--CCCeEEccCCcccccCCCc--cccccc---cCCccccCCCCcccc
Q 006559 452 --------------NKAHLFHGHLSSSNIVVDQ--LGNACISDIGVHQLFHTPF--FINDAY---NAPELKFNNNNNYSQ 510 (640)
Q Consensus 452 --------------~~~~ivHrdlk~~NILl~~--~~~~kl~DfGl~~~~~~~~--~~~~~y---~aPE~~~~~~~~~~~ 510 (640)
..+.++|+|+++.||++++ ...+.|.||+.+....... .....+ ..|+....-...+..
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1235799999999999998 4567899999876543211 000000 111110000000000
Q ss_pred -------CCCCCccchHHHHHHHHHHHhCCCCC
Q 006559 511 -------RKFWQRCDVYSFGVVLLEILTGKMAK 536 (640)
Q Consensus 511 -------~~~~~k~DV~SfGvvl~el~tg~~p~ 536 (640)
....-..+.|++|.++|++.+|..++
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00111258999999999999998765
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.67 E-value=5.9e-10 Score=116.88 Aligned_cols=133 Identities=18% Similarity=0.198 Sum_probs=99.4
Q ss_pred cEEEEEeCCCCCCCCc-----hhcc-CCCCCCEEeCCCCcCCCCCC-C-CCCCCCCcEEEcccccccccCCccC-----C
Q 006559 69 RVIKLVLEDLDLTGPA-----EVLS-RLTQLRLLSLKNNLLSSSNL-N-LSSWPHLKHLYLSHNRFTGTFPSGV-----S 135 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-----~~l~-~l~~L~~L~Ls~N~l~~~~~-~-~~~l~~L~~L~Ls~N~l~g~~p~~~-----~ 135 (640)
.+..|+|+++.++... ..+. ..++|+.|+|++|.++.... . ...+++|+.|+|++|.|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 5789999999987632 2222 33799999999999975322 2 2346789999999999975433333 3
Q ss_pred CCCCCCEEEcccCCCCCC----CCchhcCCCCCCcEEEccCCcceec----ccCCcCCCCCCcEEEcccCcCccc
Q 006559 136 SLRHLRRVDLSHNAYEGE----IPMTELTRLPNLLTLRLEDNRFTGT----LYSVNSSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 136 ~l~~L~~L~Ls~N~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~g~ 202 (640)
..++|+.|+|++|.++.. ++ ..+..+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|+..
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~-~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLM-EGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHH-HHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred cCCccceeeCCCCCCChHHHHHHH-HHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 568999999999999741 22 3346788999999999999853 344556678999999999999853
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=2.2e-07 Score=95.62 Aligned_cols=89 Identities=17% Similarity=0.162 Sum_probs=67.6
Q ss_pred CCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCc-EEEccCCcceecccCCcCCCCCCcE
Q 006559 113 WPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLL-TLRLEDNRFTGTLYSVNSSSRSILD 191 (640)
Q Consensus 113 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~-~L~L~~N~l~g~~~~~~~~~~~L~~ 191 (640)
+++|+.|+|++|+++..-+..|.++++|+.|+|.+| ++ .|+...|.++++|+ .|+|.+ +++..-+..|..+.+|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 667888888888887655667888888888888887 55 56767788888888 888877 676666677888888888
Q ss_pred EEcccCcCcccCC
Q 006559 192 FNVSNNQLSGQIP 204 (640)
Q Consensus 192 l~ls~N~l~g~ip 204 (640)
+++++|+++..-+
T Consensus 302 l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 302 VLATGDKITTLGD 314 (329)
T ss_dssp EEECSSCCCEECT
T ss_pred EEeCCCccCccch
Confidence 8888888774433
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.53 E-value=5.6e-09 Score=116.54 Aligned_cols=89 Identities=17% Similarity=0.053 Sum_probs=40.0
Q ss_pred CCCCcEEEcccc--cccccCCccCC-CCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceec-ccCCcCCCCC
Q 006559 113 WPHLKHLYLSHN--RFTGTFPSGVS-SLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGT-LYSVNSSSRS 188 (640)
Q Consensus 113 l~~L~~L~Ls~N--~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~-~~~~~~~~~~ 188 (640)
+++|++|+|+++ .+++..+..+. .+++|+.|+|++|++++......+..+++|++|+|++|.|++. ++.....+++
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 444555555422 23333222222 2455555555555554311113334555555555555555433 2222233455
Q ss_pred CcEEEcccCcCcc
Q 006559 189 ILDFNVSNNQLSG 201 (640)
Q Consensus 189 L~~l~ls~N~l~g 201 (640)
|+.|+|++|++++
T Consensus 515 L~~L~ls~n~it~ 527 (592)
T 3ogk_B 515 LRYLWVQGYRASM 527 (592)
T ss_dssp CCEEEEESCBCCT
T ss_pred cCeeECcCCcCCH
Confidence 5555555555543
No 401
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.51 E-value=2.7e-07 Score=94.61 Aligned_cols=132 Identities=18% Similarity=0.168 Sum_probs=94.6
Q ss_pred hccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCC----CcccceeEEEEcCCeEEEEEeccCCCC
Q 006559 338 AELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRH----SNIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 338 ~~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H----~niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
.+.++.|....||+. +..+++|..........+..|.++++.+.+ ..+.+++++ +..++||||+++.+
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 356899999999988 567888887654444567888888877765 123445544 56789999999988
Q ss_pred HHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCC----------------------------------------
Q 006559 414 LHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNK---------------------------------------- 453 (640)
Q Consensus 414 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~---------------------------------------- 453 (640)
+...... .++..++..++.++++.|..||....
T Consensus 114 l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8633221 24455566677777777777774322
Q ss_pred --------------------CCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 454 --------------------AHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 454 --------------------~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
+.++|+|+++.|||++.+..+.|.||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998754
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=8.9e-08 Score=94.64 Aligned_cols=80 Identities=28% Similarity=0.391 Sum_probs=59.8
Q ss_pred CCCCCCcEEEcccccccc--cCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCC--CCcEEEccCCcceecccC-----
Q 006559 111 SSWPHLKHLYLSHNRFTG--TFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLP--NLLTLRLEDNRFTGTLYS----- 181 (640)
Q Consensus 111 ~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~--~L~~L~L~~N~l~g~~~~----- 181 (640)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~---~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~ 243 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE---RELDKIKGLKLEELWLDGNSLCDTFRDQSTYI 243 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG---GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc---hhhhhcccCCcceEEccCCcCccccCcchhHH
Confidence 357788888999988887 5566777888999999999998864 2334444 889999999998886653
Q ss_pred --CcCCCCCCcEEE
Q 006559 182 --VNSSSRSILDFN 193 (640)
Q Consensus 182 --~~~~~~~L~~l~ 193 (640)
.+..+++|+.||
T Consensus 244 ~~il~~~P~L~~LD 257 (267)
T 3rw6_A 244 SAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHCTTCCEES
T ss_pred HHHHHHCcccCeEC
Confidence 245577777764
No 403
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=2.1e-08 Score=94.18 Aligned_cols=115 Identities=14% Similarity=0.213 Sum_probs=84.3
Q ss_pred hhccCCCCCCEEeCCCC-cCCCCC-----CCCCCCCCCcEEEccccccccc----CCccCCCCCCCCEEEcccCCCCCC-
Q 006559 85 EVLSRLTQLRLLSLKNN-LLSSSN-----LNLSSWPHLKHLYLSHNRFTGT----FPSGVSSLRHLRRVDLSHNAYEGE- 153 (640)
Q Consensus 85 ~~l~~l~~L~~L~Ls~N-~l~~~~-----~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~- 153 (640)
..+...+.|+.|+|++| .++... ..+...++|++|+|++|.|... +...+...++|++|+|++|.+...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 45677889999999998 886531 1355678899999999998642 334455667899999999998742
Q ss_pred ---CCchhcCCCCCCcEEEc--cCCcceec----ccCCcCCCCCCcEEEcccCcCc
Q 006559 154 ---IPMTELTRLPNLLTLRL--EDNRFTGT----LYSVNSSSRSILDFNVSNNQLS 200 (640)
Q Consensus 154 ---~p~~~~~~l~~L~~L~L--~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~ 200 (640)
+. ..+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 110 ~~~l~-~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALV-EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHH-HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHH-HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 22 34566788999999 88998754 3334455678999999999875
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=8e-07 Score=91.34 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=91.5
Q ss_pred CCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCC-EEEcccCCCCCCCCchhcCCCCCCcE
Q 006559 90 LTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLR-RVDLSHNAYEGEIPMTELTRLPNLLT 167 (640)
Q Consensus 90 l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~~l~~L~~ 167 (640)
+++|+.|+|++|.++..+. .|.++++|+.|+|++| +...-+..|.++++|+ .|+|.+ +++ .|+...|.++++|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCE
Confidence 7899999999999988766 6999999999999998 7766677899999999 999988 676 577788999999999
Q ss_pred EEccCCcceecccCCcCCCCCCcEEEc
Q 006559 168 LRLEDNRFTGTLYSVNSSSRSILDFNV 194 (640)
Q Consensus 168 L~L~~N~l~g~~~~~~~~~~~L~~l~l 194 (640)
|+|++|+++...+..|.++++|+.++.
T Consensus 302 l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 302 VLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999999888889999999998864
No 405
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.35 E-value=2.5e-06 Score=86.66 Aligned_cols=135 Identities=19% Similarity=0.174 Sum_probs=89.1
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCC---cccceeEEEE-cCCeEEEEEeccCCCCH
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHS---NIVSIRAYCN-GKDELFLVYDYLPHGSL 414 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lV~Ey~~~gsL 414 (640)
+.++.|....||+. +..+++|+-........+..|.++++.+.+. .+.+.+.++. ..+..++||||+++..+
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l 100 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL 100 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence 34778888899987 5667888754433445678899999888653 2456666664 44568899999999887
Q ss_pred HHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 006559 415 HSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGY------------------------------------------- 451 (640)
Q Consensus 415 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 451 (640)
.+.... .++...+..++.++++.|..||..
T Consensus 101 ~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 101 GEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp HHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred chhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 653211 122333334444444444444421
Q ss_pred --------------CCCCceecCCCCCCeEECC---CCC-eEEccCCcccc
Q 006559 452 --------------NKAHLFHGHLSSSNIVVDQ---LGN-ACISDIGVHQL 484 (640)
Q Consensus 452 --------------~~~~ivHrdlk~~NILl~~---~~~-~kl~DfGl~~~ 484 (640)
..+.++|+|+++.|||++. ++. +.|.||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2345799999999999987 455 47999987754
No 406
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.25 E-value=1.9e-06 Score=86.76 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=58.1
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccc--cchHHHHHHHHHHhccCCC---cccceeEEEEcCCeEEEEEeccCCCC
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHS---NIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
+.|+.|.++.||++...+|..++||+.... .....+..|++.|+.+.|. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 468999999999999989999999996543 2346788999999999875 467777763 3699999999987
Q ss_pred H
Q 006559 414 L 414 (640)
Q Consensus 414 L 414 (640)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.19 E-value=6.7e-06 Score=81.71 Aligned_cols=133 Identities=17% Similarity=0.206 Sum_probs=89.9
Q ss_pred ccccCcc-eEEEEEeC-CCcEEEEEEeccccchHHHHHHHHHHhccC-CCcccceeEEEEcCCeEEEEEeccCCCCHHHh
Q 006559 341 LGKGCVG-ATYKVVLD-GGDVVVVKRIRERKKKREVDEWLRVIGGLR-HSNIVSIRAYCNGKDELFLVYDYLPHGSLHSL 417 (640)
Q Consensus 341 iG~G~fg-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~~ 417 (640)
+..|..| .||+.... ++..+++|.-... ...++..|.+.|+.+. +--+.++++++...+..|+|||++++.++.+.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS-VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH-HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC-CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 4556555 58987754 4567888876543 3456777888777664 22356788898888999999999999887665
Q ss_pred hccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcC----------------------------------------------
Q 006559 418 LHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGY---------------------------------------------- 451 (640)
Q Consensus 418 l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------------- 451 (640)
..... .....++.+++..|.-||..
T Consensus 111 ~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 111 LEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 43211 11223444555555555531
Q ss_pred ---------CCCCceecCCCCCCeEECCCCCeEEccCCccc
Q 006559 452 ---------NKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483 (640)
Q Consensus 452 ---------~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~ 483 (640)
..+-++|+|+.+.|||++.++.+-|.||+.+.
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237999999999999987777799998864
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.19 E-value=1e-07 Score=106.20 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=48.3
Q ss_pred CCCCCEEeCCCCcCCCCCC-CCC-CCCCCcEEEcc--c----cccccc-----CCccCCCCCCCCEEEcccCCCCCCCCc
Q 006559 90 LTQLRLLSLKNNLLSSSNL-NLS-SWPHLKHLYLS--H----NRFTGT-----FPSGVSSLRHLRRVDLSHNAYEGEIPM 156 (640)
Q Consensus 90 l~~L~~L~Ls~N~l~~~~~-~~~-~l~~L~~L~Ls--~----N~l~g~-----~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 156 (640)
+++|+.|+++.|.+++... .+. .+++|+.|+|+ + |.+++. ++..+.++++|+.|+|++ .+++..+
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~- 448 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVF- 448 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHH-
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHH-
Confidence 5556666555555544221 121 35555666655 2 333311 111133445555555544 3332222
Q ss_pred hhcCC-CCCCcEEEccCCcceecccCCc-CCCCCCcEEEcccCcCc
Q 006559 157 TELTR-LPNLLTLRLEDNRFTGTLYSVN-SSSRSILDFNVSNNQLS 200 (640)
Q Consensus 157 ~~~~~-l~~L~~L~L~~N~l~g~~~~~~-~~~~~L~~l~ls~N~l~ 200 (640)
..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.++
T Consensus 449 ~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 12222 4555555555555544332222 33455555555555553
No 409
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.08 E-value=9.2e-07 Score=98.49 Aligned_cols=126 Identities=10% Similarity=-0.033 Sum_probs=83.9
Q ss_pred CcEEEEEeCCCCCCCCc-----hhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEccccccc---ccCCccCCCCCC
Q 006559 68 HRVIKLVLEDLDLTGPA-----EVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFT---GTFPSGVSSLRH 139 (640)
Q Consensus 68 ~~v~~l~l~~~~l~g~~-----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~---g~~p~~~~~l~~ 139 (640)
..+..|+|.++.+++.. ..+.++++|+.|+|++|.+.+.+..+..+++|+.|+++++... +..+..+..+++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 36788899888887432 3456789999999999888775545667777888888753332 233445666777
Q ss_pred CCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceeccc-CCcCCCCCCcEEEcc
Q 006559 140 LRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLY-SVNSSSRSILDFNVS 195 (640)
Q Consensus 140 L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~-~~~~~~~~L~~l~ls 195 (640)
|+.|+++++.. +.+| ..+..+++|++|+|++|.+++... ..+..+++|+.|+++
T Consensus 272 L~~L~l~~~~~-~~l~-~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 272 LCRLGLSYMGP-NEMP-ILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CCEEEETTCCT-TTGG-GGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred ccccCccccch-hHHH-HHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 77777776533 2455 456667777777777777665433 334556777777777
No 410
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.04 E-value=1.5e-05 Score=82.99 Aligned_cols=142 Identities=13% Similarity=0.112 Sum_probs=86.8
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCCc--ccceeEEEEcC-CeEEEEEeccCCCCHH
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSN--IVSIRAYCNGK-DELFLVYDYLPHGSLH 415 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lV~Ey~~~gsL~ 415 (640)
+.++.|....+|+... ++..+++|..... ..+..|...++.+.... +.++++++... +..|+||||+++..+.
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~ 122 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA---DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQ 122 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC---HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETT
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch---hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcc
Confidence 4578899999999876 4677888877543 35777877777776533 45677777654 6789999999976553
Q ss_pred Hh------------------hccCCCCC-----------C-CCcCHHHHH---------------------HHHHHHHHH
Q 006559 416 SL------------------LHGSRGPG-----------R-MPVDWNKRL---------------------KLASDSAKG 444 (640)
Q Consensus 416 ~~------------------l~~~~~~~-----------~-~~l~~~~~~---------------------~i~~~ia~g 444 (640)
+. ||...... . ..-.|...+ .....+..-
T Consensus 123 ~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 202 (362)
T 3ovc_A 123 DLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDEL 202 (362)
T ss_dssp TSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHH
Confidence 21 11111000 0 001122111 111112222
Q ss_pred HHHhhcC-CCCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 445 LAFLHGY-NKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 445 L~yLH~~-~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
++++... ..+.++|+|+.+.|||+++++.+.|.||+.+..
T Consensus 203 ~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 203 MLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2233221 125689999999999998877788999998754
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.02 E-value=7.1e-06 Score=85.14 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=52.8
Q ss_pred ccc-cccCcceEEEEEeC-------CCcEEEEEEecccc-----chHHHHHHHHHHhccCC---CcccceeEEEEcC---
Q 006559 339 ELL-GKGCVGATYKVVLD-------GGDVVVVKRIRERK-----KKREVDEWLRVIGGLRH---SNIVSIRAYCNGK--- 399 (640)
Q Consensus 339 ~~i-G~G~fg~Vy~~~~~-------~~~~vavK~l~~~~-----~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~--- 399 (640)
+.| +.|....+|+.... ++..+++|...... ....+..|.++++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 346 77888999988764 25678888765432 12456777777776643 2466778877654
Q ss_pred CeEEEEEeccCCCCHH
Q 006559 400 DELFLVYDYLPHGSLH 415 (640)
Q Consensus 400 ~~~~lV~Ey~~~gsL~ 415 (640)
+..|+||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3578999999986654
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.01 E-value=4.5e-07 Score=84.96 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=83.8
Q ss_pred CcEEEEEeCCC-CCCCC-----chhccCCCCCCEEeCCCCcCCCCCC-----CCCCCCCCcEEEccccccccc----CCc
Q 006559 68 HRVIKLVLEDL-DLTGP-----AEVLSRLTQLRLLSLKNNLLSSSNL-----NLSSWPHLKHLYLSHNRFTGT----FPS 132 (640)
Q Consensus 68 ~~v~~l~l~~~-~l~g~-----~~~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~g~----~p~ 132 (640)
..++.|+|+++ .+... ...+...++|+.|+|++|.|+.... .+...+.|++|+|++|.|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46889999998 77642 2567778999999999999975321 244567899999999999753 456
Q ss_pred cCCCCCCCCEEEc--ccCCCCCC----CCchhcCCCCCCcEEEccCCcce
Q 006559 133 GVSSLRHLRRVDL--SHNAYEGE----IPMTELTRLPNLLTLRLEDNRFT 176 (640)
Q Consensus 133 ~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~~l~~L~~L~L~~N~l~ 176 (640)
.+...++|+.|+| ++|.+... +. ..+...++|+.|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~-~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIA-NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHH-HHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHH-HHHHhCCCcCEEeccCCCCC
Confidence 6777889999999 88999742 11 23455689999999999986
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.96 E-value=1.3e-06 Score=90.80 Aligned_cols=132 Identities=20% Similarity=0.229 Sum_probs=81.0
Q ss_pred cEEEEEeCCCCCC----------CCchhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCC--C
Q 006559 69 RVIKLVLEDLDLT----------GPAEVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVS--S 136 (640)
Q Consensus 69 ~v~~l~l~~~~l~----------g~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~ 136 (640)
++..|.+.++... +....+..+++|+.|+|++|.-...+ .+ .+++|+.|+|..|.++......+. .
T Consensus 140 ~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l~-~~-~~~~L~~L~L~~~~l~~~~l~~l~~~~ 217 (362)
T 2ra8_A 140 HFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIG-KK-PRPNLKSLEIISGGLPDSVVEDILGSD 217 (362)
T ss_dssp TCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBCC-SC-BCTTCSEEEEECSBCCHHHHHHHHHSB
T ss_pred hhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCceec-cc-cCCCCcEEEEecCCCChHHHHHHHHcc
Confidence 5666666554321 12255677889999999887311112 23 377888888888877543333333 6
Q ss_pred CCCCCEEEccc--CCCCCCCCc----hhc--CCCCCCcEEEccCCcceecccCCc---CCCCCCcEEEcccCcCccc
Q 006559 137 LRHLRRVDLSH--NAYEGEIPM----TEL--TRLPNLLTLRLEDNRFTGTLYSVN---SSSRSILDFNVSNNQLSGQ 202 (640)
Q Consensus 137 l~~L~~L~Ls~--N~l~g~~p~----~~~--~~l~~L~~L~L~~N~l~g~~~~~~---~~~~~L~~l~ls~N~l~g~ 202 (640)
+++|+.|+|+. |...|.... ..+ ..+|+|++|+|.+|.+++..+..+ ..+++|+.|+|+.|.|++.
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 88888888853 332222100 112 347888888888888875432221 2467888888888888763
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.93 E-value=6.8e-07 Score=99.56 Aligned_cols=125 Identities=18% Similarity=0.270 Sum_probs=67.7
Q ss_pred cEEEEEeCCCCCCCCc-hhcc-CCCCCCEEeCCCC-cCCCC-CCC-CCCCCCCcEEEcccccccccCCccC----CCCCC
Q 006559 69 RVIKLVLEDLDLTGPA-EVLS-RLTQLRLLSLKNN-LLSSS-NLN-LSSWPHLKHLYLSHNRFTGTFPSGV----SSLRH 139 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~~-~~l~-~l~~L~~L~Ls~N-~l~~~-~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l~~ 139 (640)
++..|+|+++.+++.. ..+. .+++|+.|+|++| .++.. .+. +.++++|++|+|++|.+++..+..+ ..+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 4666666666655432 2232 4667777777666 33321 111 2356677777777777665433322 25556
Q ss_pred CCEEEcccCCCCCCCCchh----cCCCCCCcEEEccCC-cceecccCCcCCCCCCcEEEccc
Q 006559 140 LRRVDLSHNAYEGEIPMTE----LTRLPNLLTLRLEDN-RFTGTLYSVNSSSRSILDFNVSN 196 (640)
Q Consensus 140 L~~L~Ls~N~l~g~~p~~~----~~~l~~L~~L~L~~N-~l~g~~~~~~~~~~~L~~l~ls~ 196 (640)
|+.|+|++|. +.++... +.++++|++|+|++| .+++ ++..+..+++|+.|+++.
T Consensus 186 L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 186 LVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGG 244 (594)
T ss_dssp CCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSB
T ss_pred CcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccccc
Confidence 7777777665 2222121 233567777777766 3333 555555566666666443
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.92 E-value=4.7e-06 Score=86.49 Aligned_cols=37 Identities=11% Similarity=0.196 Sum_probs=16.9
Q ss_pred CCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCC
Q 006559 112 SWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYE 151 (640)
Q Consensus 112 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 151 (640)
.+|+|+.|+|++|.-. .+|. + .+++|+.|+|..+.++
T Consensus 170 ~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~ 206 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLP 206 (362)
T ss_dssp TCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCC
T ss_pred cCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCC
Confidence 3455555555554210 1222 2 2455555555555443
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.83 E-value=6.5e-05 Score=79.16 Aligned_cols=124 Identities=14% Similarity=0.174 Sum_probs=79.9
Q ss_pred cEEEEEeCCCCCCC-CchhccCCCCCCEEeCCCCcCCCCCC-CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcc
Q 006559 69 RVIKLVLEDLDLTG-PAEVLSRLTQLRLLSLKNNLLSSSNL-NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLS 146 (640)
Q Consensus 69 ~v~~l~l~~~~l~g-~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 146 (640)
.+..+.|+.+ +.- ....|.++++|+.++|..| +..... .|.+ .+|+.++| .|+++..-+..|.++++|+.++|.
T Consensus 204 ~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~ 279 (401)
T 4fdw_A 204 GIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTY 279 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEE
T ss_pred ccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeC
Confidence 3556666543 322 2356788888999998875 333222 3444 57777777 445555556677777888888877
Q ss_pred cCCCC----CCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCCcEEEcccC
Q 006559 147 HNAYE----GEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNN 197 (640)
Q Consensus 147 ~N~l~----g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N 197 (640)
+|.+. ..|+...|.++++|+.++|. |.++..-...|.++.+|+.++|..|
T Consensus 280 ~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 280 GSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp SSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred CccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 77664 12555667777778887777 4466555666777777777777544
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.79 E-value=7e-05 Score=76.84 Aligned_cols=141 Identities=18% Similarity=0.263 Sum_probs=77.6
Q ss_pred cccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhcc-----CCCccccee-E--EEEcCCeEEEEEeccCC
Q 006559 340 LLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGL-----RHSNIVSIR-A--YCNGKDELFLVYDYLPH 411 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-~--~~~~~~~~~lV~Ey~~~ 411 (640)
.|+.|..+.||++...+|. +++|+.... ...+..|.++++.| ..|.++... | +....+..++||||+++
T Consensus 39 ~l~gG~~n~~~~v~~~~~~-~vlk~~~~~--~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~G 115 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGA-VCLKRIHRP--EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEG 115 (346)
T ss_dssp ECC----CEEEEEEETTEE-EEEEEECSC--HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCCC
T ss_pred eccccccCcEEEEEeCCCC-EEEEecCCC--HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeecC
Confidence 4666778899999876654 888988753 22333344444333 234444311 1 12235678999999998
Q ss_pred CCHH--------------Hhhcc----CCCCC-----CCCcCHHHHH-------------------------------HH
Q 006559 412 GSLH--------------SLLHG----SRGPG-----RMPVDWNKRL-------------------------------KL 437 (640)
Q Consensus 412 gsL~--------------~~l~~----~~~~~-----~~~l~~~~~~-------------------------------~i 437 (640)
..+. ..+|. ...+. ...-.|.... .+
T Consensus 116 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (346)
T 2q83_A 116 RPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGF 195 (346)
T ss_dssp BCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 6542 01111 10010 0012343211 01
Q ss_pred HHHHHHHHHHhhc----------CCCCCceecCCCCCCeEECCCCCeEEccCCccc
Q 006559 438 ASDSAKGLAFLHG----------YNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483 (640)
Q Consensus 438 ~~~ia~gL~yLH~----------~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~ 483 (640)
...+.+++++|+. .....++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 196 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 196 IEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1223445666653 024569999999999999888889999998764
No 418
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.79 E-value=0.00012 Score=77.17 Aligned_cols=111 Identities=9% Similarity=0.145 Sum_probs=74.2
Q ss_pred hhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCC
Q 006559 85 EVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPN 164 (640)
Q Consensus 85 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~ 164 (640)
..|.++++|+.++|++|.+...+...-.+++|+.+.|..| +...-...|.++++|+.++|..| ++ .|+...|.+ .+
T Consensus 174 ~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~-~~ 249 (401)
T 4fdw_A 174 DIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE-SG 249 (401)
T ss_dssp STTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT-CC
T ss_pred HHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc-CC
Confidence 4567777777777777777665543222567777777643 55455566777777777777765 43 455555655 67
Q ss_pred CcEEEccCCcceecccCCcCCCCCCcEEEcccCcCc
Q 006559 165 LLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQLS 200 (640)
Q Consensus 165 L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 200 (640)
|+.+.| .|.++..-...|..+.+|+.+++.+|.+.
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 777777 45566555667777888888888877765
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.57 E-value=0.00027 Score=74.36 Aligned_cols=72 Identities=8% Similarity=0.066 Sum_probs=45.7
Q ss_pred ccccccCcceEEEEEeC-CCcEEEEEEecccc---------chHHHHHHHHHHhccCC--Cc-ccceeEEEEcCCeEEEE
Q 006559 339 ELLGKGCVGATYKVVLD-GGDVVVVKRIRERK---------KKREVDEWLRVIGGLRH--SN-IVSIRAYCNGKDELFLV 405 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---------~~~~~~~e~~~l~~l~H--~n-iv~l~~~~~~~~~~~lV 405 (640)
+.||.|.++.||++... ++..++||...... ....+..|.++++.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 46789999764321 12334567777766532 33 3455544 34456899
Q ss_pred EeccCCC
Q 006559 406 YDYLPHG 412 (640)
Q Consensus 406 ~Ey~~~g 412 (640)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.53 E-value=0.00045 Score=69.94 Aligned_cols=139 Identities=17% Similarity=0.168 Sum_probs=89.0
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccC---CCcccceeEEEEcCCeEEEEEeccCCCCHH
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLR---HSNIVSIRAYCNGKDELFLVYDYLPHGSLH 415 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~ 415 (640)
+.|+.|.+..+|+.... +..+++|..... ....+..|.+.|+.|. ...+.+.++++...+..++||||+++..+.
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~ 119 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS-YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK 119 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG-GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc-cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence 45788999999998864 567788876543 3456777877777663 356778888888788999999999987642
Q ss_pred H-----------hhccCCC-C----------C------CCCcCHHHHH---HHHH----------------HHHHH-HHH
Q 006559 416 S-----------LLHGSRG-P----------G------RMPVDWNKRL---KLAS----------------DSAKG-LAF 447 (640)
Q Consensus 416 ~-----------~l~~~~~-~----------~------~~~l~~~~~~---~i~~----------------~ia~g-L~y 447 (640)
. .||.... + + .-.-+|.... ++.. .+... ...
T Consensus 120 ~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~ 199 (312)
T 3jr1_A 120 QSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADT 199 (312)
T ss_dssp TTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 1 2332211 0 0 0012465322 1111 11111 223
Q ss_pred hhc-CCCCCceecCCCCCCeEECCCCCeEEccCC
Q 006559 448 LHG-YNKAHLFHGHLSSSNIVVDQLGNACISDIG 480 (640)
Q Consensus 448 LH~-~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 480 (640)
|.. ..++.+||+|+.+.|++++.++ +.|.|+.
T Consensus 200 L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 200 LSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred hccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 421 2356799999999999999887 8899973
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.31 E-value=0.0014 Score=65.38 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=51.5
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccc--cchHHHHHHHHHHhccCCC---cccceeEEEEcCCeEEEEEeccCCCC
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRER--KKKREVDEWLRVIGGLRHS---NIVSIRAYCNGKDELFLVYDYLPHGS 413 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lV~Ey~~~gs 413 (640)
+.+|.|..+.||+.++.+|+.|+||+.... .....+..|.+.|+.|.-. -+.+.+++. .-++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 458999999999999999999999987544 2335678888887776422 234444432 3478999998765
Q ss_pred H
Q 006559 414 L 414 (640)
Q Consensus 414 L 414 (640)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.18 E-value=0.0014 Score=69.33 Aligned_cols=76 Identities=13% Similarity=0.077 Sum_probs=45.9
Q ss_pred CCCceecCCCCCCeEECCCCCeEEccCCcccccCCCc-----c--ccccccCCccccCCCCccccCCCCCccchHHHHHH
Q 006559 453 KAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPF-----F--INDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVV 525 (640)
Q Consensus 453 ~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~~-----~--~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvv 525 (640)
.+.++|+|+++.|||++.++ ++|.||+.+..-...+ . ....|.+|+..... ....-....++.+....
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 305 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQ----ENDRKEYKQWILRTIEQ 305 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCS----SCCSHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhccccccc----ccchHHHHHHHHHHHHH
Confidence 45699999999999999876 9999999876543210 0 01234555422100 00011123455678888
Q ss_pred HHHHHhCC
Q 006559 526 LLEILTGK 533 (640)
Q Consensus 526 l~el~tg~ 533 (640)
+|+.++++
T Consensus 306 ~~~~y~~~ 313 (420)
T 2pyw_A 306 TWNLFNKR 313 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877754
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.09 E-value=0.00079 Score=58.61 Aligned_cols=56 Identities=21% Similarity=0.299 Sum_probs=29.5
Q ss_pred EEEccccccc-ccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcce
Q 006559 118 HLYLSHNRFT-GTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFT 176 (640)
Q Consensus 118 ~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~ 176 (640)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+ .+|...|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4555555554 23443221 24566666666665 355455555666666666666543
No 424
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.06 E-value=0.0042 Score=63.06 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=78.4
Q ss_pred cccccCcceEEEEEeCCCcEEEEEEeccc-cchHHHHHHHHHHhccCCCc--ccceeEE-----EEcCCeEEEEEeccCC
Q 006559 340 LLGKGCVGATYKVVLDGGDVVVVKRIRER-KKKREVDEWLRVIGGLRHSN--IVSIRAY-----CNGKDELFLVYDYLPH 411 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lV~Ey~~~ 411 (640)
.++ |....||+....+|..+++|..... .....+..|..++..+.... +.+++.. ....+..++||||+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 355 7778899988777778899998743 33455666776666553222 3334332 1224567899999987
Q ss_pred CCHH-----Hh---------hcc----CCCCCCCCcCHHHH----------------------HHHHHHHHHHHHHhh-c
Q 006559 412 GSLH-----SL---------LHG----SRGPGRMPVDWNKR----------------------LKLASDSAKGLAFLH-G 450 (640)
Q Consensus 412 gsL~-----~~---------l~~----~~~~~~~~l~~~~~----------------------~~i~~~ia~gL~yLH-~ 450 (640)
..+. .+ +|. .....+...++... ...+..+...++-+- .
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5431 10 111 10001112232211 001111112222111 1
Q ss_pred CCCCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 451 YNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 451 ~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
.....++|+|+++.|||++ + .+.|.||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234589999999999999 4 899999987643
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.06 E-value=0.0023 Score=64.81 Aligned_cols=144 Identities=10% Similarity=0.060 Sum_probs=77.3
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccccchHHHHHHHHHHhccCCCc--ccceeEE------EEcCCeEEEEEeccC
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRERKKKREVDEWLRVIGGLRHSN--IVSIRAY------CNGKDELFLVYDYLP 410 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~------~~~~~~~~lV~Ey~~ 410 (640)
+.|+.|....+|+....+| .+++|..........+..|.+++..+.... +.+++.. ....+..+++|||++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~ 106 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE 106 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC
Confidence 3467788889999987766 577888765323344555666655543212 2222211 112356799999998
Q ss_pred CCCHHH--------------hhccC----CCCC---CCCcCHHHHHHH------------HHHHHHHHHHhhcC----CC
Q 006559 411 HGSLHS--------------LLHGS----RGPG---RMPVDWNKRLKL------------ASDSAKGLAFLHGY----NK 453 (640)
Q Consensus 411 ~gsL~~--------------~l~~~----~~~~---~~~l~~~~~~~i------------~~~ia~gL~yLH~~----~~ 453 (640)
+..+.. .+|.. ..+. .....|.....- ...+...+++++.. .+
T Consensus 107 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~ 186 (322)
T 2ppq_A 107 GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLP 186 (322)
T ss_dssp CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSC
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCC
Confidence 764311 11211 1010 001234331110 11234445555421 23
Q ss_pred CCceecCCCCCCeEECCCCCeEEccCCccc
Q 006559 454 AHLFHGHLSSSNIVVDQLGNACISDIGVHQ 483 (640)
Q Consensus 454 ~~ivHrdlk~~NILl~~~~~~kl~DfGl~~ 483 (640)
..++|+|+.+.|||++.+..+.|.||+.+.
T Consensus 187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 468999999999999987666899998764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.00 E-value=0.00016 Score=66.24 Aligned_cols=81 Identities=12% Similarity=0.183 Sum_probs=41.7
Q ss_pred CCCEEeCCCCcCCCCC-CCCCCCCCCcEEEccccc-ccccCCccCCCC----CCCCEEEcccCC-CCCCCCchhcCCCCC
Q 006559 92 QLRLLSLKNNLLSSSN-LNLSSWPHLKHLYLSHNR-FTGTFPSGVSSL----RHLRRVDLSHNA-YEGEIPMTELTRLPN 164 (640)
Q Consensus 92 ~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~~l~~ 164 (640)
+|+.|||+++.++... ..+..+++|++|+|+++. ++..--..+..+ ++|+.|+|+++. ++.. -...+.++++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~-Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDK-GIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHH-HHHHGGGCTT
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHH-HHHHHhcCCC
Confidence 4667777776665432 235566666666666664 443221223332 256666666653 4421 1123445566
Q ss_pred CcEEEccCC
Q 006559 165 LLTLRLEDN 173 (640)
Q Consensus 165 L~~L~L~~N 173 (640)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666655
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.87 E-value=0.00012 Score=66.99 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=45.5
Q ss_pred cEEEEEeCCCCCCCC-chhccCCCCCCEEeCCCCc-CCCCCC-CCCCC----CCCcEEEccccc-ccccCCccCCCCCCC
Q 006559 69 RVIKLVLEDLDLTGP-AEVLSRLTQLRLLSLKNNL-LSSSNL-NLSSW----PHLKHLYLSHNR-FTGTFPSGVSSLRHL 140 (640)
Q Consensus 69 ~v~~l~l~~~~l~g~-~~~l~~l~~L~~L~Ls~N~-l~~~~~-~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~L 140 (640)
++..|||++..++.. ...+..+++|+.|+|+++. +++... .+..+ ++|++|+|+++. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 567777776665432 2445667777777777664 443211 23332 357777777753 543222335566777
Q ss_pred CEEEcccCC
Q 006559 141 RRVDLSHNA 149 (640)
Q Consensus 141 ~~L~Ls~N~ 149 (640)
+.|+|++..
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777776654
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.77 E-value=0.0024 Score=55.53 Aligned_cols=55 Identities=24% Similarity=0.240 Sum_probs=39.4
Q ss_pred EEeCCCCcCC--CCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCC
Q 006559 95 LLSLKNNLLS--SSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYE 151 (640)
Q Consensus 95 ~L~Ls~N~l~--~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 151 (640)
.++.+++.|+ ..|..+ .++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555566665 443222 235888888888888766667888899999999999886
No 429
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.71 E-value=0.0046 Score=64.75 Aligned_cols=111 Identities=14% Similarity=0.169 Sum_probs=79.2
Q ss_pred hhccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCC
Q 006559 85 EVLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPN 164 (640)
Q Consensus 85 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~ 164 (640)
..|...+.|+.+.+.++...-....+.+++.|+.+.+. +.+...-...|.++.+|+.++|..| ++ .|....|.++.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTT
T ss_pred ceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCC
Confidence 45777888888888766543333357788888888886 4455444557888888888888754 44 466567888888
Q ss_pred CcEEEccCCcceecccCCcCCCCCCcEEEcccCcC
Q 006559 165 LLTLRLEDNRFTGTLYSVNSSSRSILDFNVSNNQL 199 (640)
Q Consensus 165 L~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls~N~l 199 (640)
|+.+.|.++ ++..-...|.++.+|+.+++.+|..
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 888888654 5544456677888888888887754
No 430
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.69 E-value=0.011 Score=60.11 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=27.3
Q ss_pred CCCceecCCCCCCeEECCC----CCeEEccCCcccc
Q 006559 453 KAHLFHGHLSSSNIVVDQL----GNACISDIGVHQL 484 (640)
Q Consensus 453 ~~~ivHrdlk~~NILl~~~----~~~kl~DfGl~~~ 484 (640)
...++|+|+.+.|||++.+ +.+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4569999999999999874 6789999998754
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.69 E-value=0.0038 Score=62.68 Aligned_cols=69 Identities=4% Similarity=-0.042 Sum_probs=39.7
Q ss_pred ccccccCcceEEEEEeCCCcEEEEEEeccccc-hHHHHHHHHHHhccCCCcc-cceeEEEEcCCeEEEEEecc-CCCCH
Q 006559 339 ELLGKGCVGATYKVVLDGGDVVVVKRIRERKK-KREVDEWLRVIGGLRHSNI-VSIRAYCNGKDELFLVYDYL-PHGSL 414 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~Ey~-~~gsL 414 (640)
+.|+.|....+|+. ..+++|....... ......|.+.++.+....+ .++++++ .+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 45778888999998 4577887754311 1122345555555433233 3455543 33457899999 55433
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.55 E-value=0.00031 Score=65.58 Aligned_cols=114 Identities=11% Similarity=0.200 Sum_probs=73.0
Q ss_pred hccCCCCCCEEeCCCC-cCCCCCC-----CCCCCCCCcEEEccccccccc----CCccCCCCCCCCEEEcccCCCCCC--
Q 006559 86 VLSRLTQLRLLSLKNN-LLSSSNL-----NLSSWPHLKHLYLSHNRFTGT----FPSGVSSLRHLRRVDLSHNAYEGE-- 153 (640)
Q Consensus 86 ~l~~l~~L~~L~Ls~N-~l~~~~~-----~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~-- 153 (640)
.+.+-+.|+.|+|++| .|..... .+..-+.|+.|+|++|.|... +...+..-+.|+.|+|++|.+...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3456678999999885 7754211 244556789999999998632 223334557899999999988632
Q ss_pred --CCchhcCCCCCCcEEEccCC---ccee----cccCCcCCCCCCcEEEcccCcCc
Q 006559 154 --IPMTELTRLPNLLTLRLEDN---RFTG----TLYSVNSSSRSILDFNVSNNQLS 200 (640)
Q Consensus 154 --~p~~~~~~l~~L~~L~L~~N---~l~g----~~~~~~~~~~~L~~l~ls~N~l~ 200 (640)
+- ..+..-+.|+.|+|++| .+.. .+...+..-+.|..|+++.|.+.
T Consensus 116 ~ala-~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 116 ARLL-RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHH-HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHH-HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 11 23444567999999865 3332 13334445577888888777643
No 433
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.51 E-value=0.01 Score=62.08 Aligned_cols=84 Identities=11% Similarity=0.176 Sum_probs=55.5
Q ss_pred CCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCC
Q 006559 109 NLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRS 188 (640)
Q Consensus 109 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~ 188 (640)
.|.+++.|+.+.+..+..+ .-...|.++++|+.+.+. +.++ .|+...|.++++|+.++|..| ++..-...|..+.+
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 4667777888877665432 334467777788888775 3444 466667777788888887654 55444556777777
Q ss_pred CcEEEccc
Q 006559 189 ILDFNVSN 196 (640)
Q Consensus 189 L~~l~ls~ 196 (640)
|+.+.+..
T Consensus 336 L~~i~ip~ 343 (394)
T 4gt6_A 336 LERIAIPS 343 (394)
T ss_dssp CCEEEECT
T ss_pred CCEEEECc
Confidence 87777643
No 434
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.45 E-value=0.011 Score=61.86 Aligned_cols=84 Identities=12% Similarity=0.055 Sum_probs=50.7
Q ss_pred CCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCCcEEEccCCcceecccCCcCCCCCC
Q 006559 110 LSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNLLTLRLEDNRFTGTLYSVNSSSRSI 189 (640)
Q Consensus 110 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L~~L~L~~N~l~g~~~~~~~~~~~L 189 (640)
+..+.+|+.+.+..+ +...-...|.++.+|+.++|.++ ++ .|+...|.++++|+.+.|..| ++..-...|.++.+|
T Consensus 293 F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred ccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 445666666666543 44333445667777777777543 44 455556667777777777655 554445566667777
Q ss_pred cEEEcccC
Q 006559 190 LDFNVSNN 197 (640)
Q Consensus 190 ~~l~ls~N 197 (640)
+.+++..|
T Consensus 369 ~~i~lp~~ 376 (394)
T 4fs7_A 369 KKVELPKR 376 (394)
T ss_dssp CEEEEEGG
T ss_pred CEEEECCC
Confidence 77766543
No 435
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.26 E-value=0.022 Score=59.00 Aligned_cols=107 Identities=9% Similarity=0.101 Sum_probs=57.0
Q ss_pred hccCCCCCCEEeCCCCcCCCCCCCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCCC
Q 006559 86 VLSRLTQLRLLSLKNNLLSSSNLNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPNL 165 (640)
Q Consensus 86 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~L 165 (640)
.+....+|+.+.+..+.-.-....+..+..|+.+.+..+ ++..-...|.++.+|+.+++..+ +. .++...|..+++|
T Consensus 212 ~f~~~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTC
T ss_pred ccccccccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-ecccccccccccc
Confidence 345556666666654422111224555666666666554 33333445556666666666433 33 3444455666666
Q ss_pred cEEEccCCcceecccCCcCCCCCCcEEEcc
Q 006559 166 LTLRLEDNRFTGTLYSVNSSSRSILDFNVS 195 (640)
Q Consensus 166 ~~L~L~~N~l~g~~~~~~~~~~~L~~l~ls 195 (640)
+.+.+.+|.++..-...|.++.+|+.++|.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcC
Confidence 666666665654445556566666666553
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.25 E-value=0.013 Score=62.10 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=46.0
Q ss_pred cccccCcceEEEEEeCC--------CcEEEEEEeccccchHHHHHHHHHHhccCCCcc-cceeEEEEcCCeEEEEEeccC
Q 006559 340 LLGKGCVGATYKVVLDG--------GDVVVVKRIRERKKKREVDEWLRVIGGLRHSNI-VSIRAYCNGKDELFLVYDYLP 410 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~Ey~~ 410 (640)
.|+.|....+|++...+ +..+++|+.........+..|.++++.+...++ .++++.+.+ .+||||++
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~ 155 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIP 155 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeC
Confidence 46778888999998763 467888887442221445567777776643344 566766542 38999998
Q ss_pred CCC
Q 006559 411 HGS 413 (640)
Q Consensus 411 ~gs 413 (640)
+..
T Consensus 156 G~~ 158 (429)
T 1nw1_A 156 SRP 158 (429)
T ss_dssp EEE
T ss_pred Ccc
Confidence 633
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.07 E-value=0.025 Score=58.58 Aligned_cols=140 Identities=11% Similarity=0.129 Sum_probs=78.7
Q ss_pred cccccCcceEEEEEeCC--------CcEEEEEEeccc-cchHHHHHHHHHHhccCCCcc-cceeEEEEcCCeEEEEEecc
Q 006559 340 LLGKGCVGATYKVVLDG--------GDVVVVKRIRER-KKKREVDEWLRVIGGLRHSNI-VSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~~~--------~~~vavK~l~~~-~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~Ey~ 409 (640)
.|..|-...+|++...+ +..+++|+.... .......+|.++++.+.-.++ .++++++.+ .+||||+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i 132 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYI 132 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEe
Confidence 46667778899988653 467888876432 234455678877776643333 556666643 2999999
Q ss_pred CCCCHHH-----------------hhccCCCC-CCCCc-CHHHHHHHHHHHHH-------------------HHHH----
Q 006559 410 PHGSLHS-----------------LLHGSRGP-GRMPV-DWNKRLKLASDSAK-------------------GLAF---- 447 (640)
Q Consensus 410 ~~gsL~~-----------------~l~~~~~~-~~~~l-~~~~~~~i~~~ia~-------------------gL~y---- 447 (640)
++..|.. -||....+ ++.+. -|.++.++..++.. .++.
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 212 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKL 212 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHH
Confidence 8755431 12222111 11111 24455544433321 2222
Q ss_pred hhc-CCCCCceecCCCCCCeEECCC----CCeEEccCCccc
Q 006559 448 LHG-YNKAHLFHGHLSSSNIVVDQL----GNACISDIGVHQ 483 (640)
Q Consensus 448 LH~-~~~~~ivHrdlk~~NILl~~~----~~~kl~DfGl~~ 483 (640)
|.. .....++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 213 L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 213 LESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 221 123458999999999999876 789999997764
No 438
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.04 E-value=0.0097 Score=61.60 Aligned_cols=70 Identities=10% Similarity=0.031 Sum_probs=39.9
Q ss_pred cccccCcceEEEEEeCC---------CcEEEEEEeccccch-HHHHHHHHHHhccCCCcc-cceeEEEEcCCeEEEEEec
Q 006559 340 LLGKGCVGATYKVVLDG---------GDVVVVKRIRERKKK-REVDEWLRVIGGLRHSNI-VSIRAYCNGKDELFLVYDY 408 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~-~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~Ey 408 (640)
.|+.|....+|++...+ +..+++|........ .+...|.++++.+...++ .++++.. . -++||||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e~ 115 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEEW 115 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEEE
Confidence 46778788999988754 257888876543211 123456666665543333 4566554 2 2689999
Q ss_pred cCCCC
Q 006559 409 LPHGS 413 (640)
Q Consensus 409 ~~~gs 413 (640)
+++..
T Consensus 116 i~G~~ 120 (369)
T 3c5i_A 116 LYGDP 120 (369)
T ss_dssp CCSEE
T ss_pred ecCCc
Confidence 98754
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.03 E-value=0.029 Score=52.69 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=64.0
Q ss_pred CCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCCeEECCCCCeEEccCCcccccCCCccc
Q 006559 412 GSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLFHGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFI 491 (640)
Q Consensus 412 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 491 (640)
-+|.++|..... +++..+.+.++.|.+++|.-+-....+ ..+=+-|..|++..+|.+...+ ..+. ..
T Consensus 33 vSL~eIL~~~~~----PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------~~ 99 (229)
T 2yle_A 33 LSLEEILRLYNQ----PINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------AG 99 (229)
T ss_dssp EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHcCC----CcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------cc
Confidence 478999876543 799999999999999998766211011 1222346889999999988764 2211 11
Q ss_pred cccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCC
Q 006559 492 NDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKM 534 (640)
Q Consensus 492 ~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~ 534 (640)
...+.+||.. ....+.+.=|||+|+++|.-+--..
T Consensus 100 ~~~~~~pe~~--------~~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 100 EPPPVAGKLG--------YSQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp -------CCS--------SSSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCCChhhc--------cccchHHHHHHHHHHHHHHHhhcCC
Confidence 2245688853 1244567889999999999886333
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.72 E-value=0.038 Score=56.40 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=27.4
Q ss_pred CCCceecCCCCCCeEECCCCCeEEccCCcccc
Q 006559 453 KAHLFHGHLSSSNIVVDQLGNACISDIGVHQL 484 (640)
Q Consensus 453 ~~~ivHrdlk~~NILl~~~~~~kl~DfGl~~~ 484 (640)
...++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34689999999999999888899999976653
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.67 E-value=0.1 Score=53.86 Aligned_cols=106 Identities=13% Similarity=0.122 Sum_probs=75.3
Q ss_pred hhccCCCCCCEEeCCCCcCCCCC-CCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCC
Q 006559 85 EVLSRLTQLRLLSLKNNLLSSSN-LNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLP 163 (640)
Q Consensus 85 ~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~ 163 (640)
..+.....|+.+.+..+ +.... ..+.++.+|+.+.+..+ +...-...|.++++|+.+++.+|.++ .|+...|.+++
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~ 310 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCV 310 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCT
T ss_pred ccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCC
Confidence 34667788888888765 33322 25777888888888654 44444456788888998888888777 56667788888
Q ss_pred CCcEEEccCCcceecccCCcCCCCCCcEEEc
Q 006559 164 NLLTLRLEDNRFTGTLYSVNSSSRSILDFNV 194 (640)
Q Consensus 164 ~L~~L~L~~N~l~g~~~~~~~~~~~L~~l~l 194 (640)
+|+.+.|.++ ++..-...|.++.+|+.+.+
T Consensus 311 ~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 311 KLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred CCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 8998888655 55444566777888877654
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.37 E-value=0.067 Score=56.93 Aligned_cols=72 Identities=11% Similarity=0.101 Sum_probs=44.0
Q ss_pred ccccccCcceEEEEEeCC-CcEEEEEEecccc-chHHHHHHHHHHhccCCCcc-cceeEEEEcCCeEEEEEeccCCCCH
Q 006559 339 ELLGKGCVGATYKVVLDG-GDVVVVKRIRERK-KKREVDEWLRVIGGLRHSNI-VSIRAYCNGKDELFLVYDYLPHGSL 414 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~Ey~~~gsL 414 (640)
+.|+.|-...+|++...+ +..+++|+..... ..-+...|.++++.|...++ .++++++. + .+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 357778888999998775 4677888764331 11112467777776654445 46777763 2 259999987443
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.29 E-value=0.032 Score=58.15 Aligned_cols=101 Identities=10% Similarity=0.037 Sum_probs=74.7
Q ss_pred hccCCCCCCEEeCCCCcCCCCC-CCCCCCCCCcEEEcccccccccCCccCCCCCCCCEEEcccCCCCCCCCchhcCCCCC
Q 006559 86 VLSRLTQLRLLSLKNNLLSSSN-LNLSSWPHLKHLYLSHNRFTGTFPSGVSSLRHLRRVDLSHNAYEGEIPMTELTRLPN 164 (640)
Q Consensus 86 ~l~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~l~~ 164 (640)
.+....+|+.+.+.++ +.... ..|.++++|+.++|.++ ++-.-...|.++++|+.++|..| ++ .|+...|.++++
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~ 367 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCIN 367 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTT
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCC
Confidence 4566778888888655 43322 25889999999999755 66555678999999999999877 65 577788999999
Q ss_pred CcEEEccCCcceecccCCcCCCCCCcEE
Q 006559 165 LLTLRLEDNRFTGTLYSVNSSSRSILDF 192 (640)
Q Consensus 165 L~~L~L~~N~l~g~~~~~~~~~~~L~~l 192 (640)
|+.++|..| ++ .+...+.++.+|+.+
T Consensus 368 L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 368 LKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 999999766 22 233456667777653
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.24 E-value=0.0064 Score=56.62 Aligned_cols=86 Identities=20% Similarity=0.325 Sum_probs=61.3
Q ss_pred CCCCCCcEEEcccc-ccccc----CCccCCCCCCCCEEEcccCCCCCC----CCchhcCCCCCCcEEEccCCcceec---
Q 006559 111 SSWPHLKHLYLSHN-RFTGT----FPSGVSSLRHLRRVDLSHNAYEGE----IPMTELTRLPNLLTLRLEDNRFTGT--- 178 (640)
Q Consensus 111 ~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~~l~~L~~L~L~~N~l~g~--- 178 (640)
.+-+.|+.|+|++| .+... +-..+..-+.|+.|+|++|.+... |- ..+..-+.|+.|+|++|+|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA-~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLI-ELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHH-HHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHH-HHHhcCCccCeEecCCCcCCHHHHH
Confidence 44568999999986 77421 334456678999999999999731 11 2233457899999999999854
Q ss_pred -ccCCcCCCCCCcEEEcccC
Q 006559 179 -LYSVNSSSRSILDFNVSNN 197 (640)
Q Consensus 179 -~~~~~~~~~~L~~l~ls~N 197 (640)
+...+..-..|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 3334555667999999865
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=91.31 E-value=0.51 Score=49.50 Aligned_cols=71 Identities=15% Similarity=0.072 Sum_probs=42.9
Q ss_pred cccccCcceEEEEEeCC--------CcEEEEEEecccc-chHHHHHHHHHHhccCCCcc-cceeEEEEcCCeEEEEEecc
Q 006559 340 LLGKGCVGATYKVVLDG--------GDVVVVKRIRERK-KKREVDEWLRVIGGLRHSNI-VSIRAYCNGKDELFLVYDYL 409 (640)
Q Consensus 340 ~iG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~-~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~Ey~ 409 (640)
.+..|-...+|+....+ +..+++++..... ..-+..+|.++++.+.-.++ .++++.+. -++||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEEEe
Confidence 45567777899988763 4678888764431 11123456666665543233 45565442 27899999
Q ss_pred CCCCH
Q 006559 410 PHGSL 414 (640)
Q Consensus 410 ~~gsL 414 (640)
++..|
T Consensus 153 ~G~~l 157 (424)
T 3mes_A 153 DGEPL 157 (424)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98653
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.24 E-value=1.2 Score=46.30 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=26.2
Q ss_pred CCCceecCCCCCCeEECCC------CCeEEccCCccc
Q 006559 453 KAHLFHGHLSSSNIVVDQL------GNACISDIGVHQ 483 (640)
Q Consensus 453 ~~~ivHrdlk~~NILl~~~------~~~kl~DfGl~~ 483 (640)
+..++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 3458999999999999876 789999997654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=83.95 E-value=3.2 Score=43.00 Aligned_cols=29 Identities=14% Similarity=0.246 Sum_probs=24.3
Q ss_pred ceecCCCCCCeEE------CCCCCeEEccCCcccc
Q 006559 456 LFHGHLSSSNIVV------DQLGNACISDIGVHQL 484 (640)
Q Consensus 456 ivHrdlk~~NILl------~~~~~~kl~DfGl~~~ 484 (640)
++|+|+.+.|||+ +++..+.++||..+..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999987654
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=83.42 E-value=2.2 Score=39.86 Aligned_cols=122 Identities=8% Similarity=0.094 Sum_probs=82.0
Q ss_pred HHHHhccCCCcccceeEEEEcCCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHHHhhcCCCCCce
Q 006559 378 LRVIGGLRHSNIVSIRAYCNGKDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLAFLHGYNKAHLF 457 (640)
Q Consensus 378 ~~~l~~l~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 457 (640)
+.+|. ..||+.+.. .+-...+.+.+.|+.-+.+-=...++ .++...+++++..|+.-.+++++ -+
T Consensus 37 l~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~ 101 (215)
T 4ann_A 37 MYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RY 101 (215)
T ss_dssp GGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SE
T ss_pred HHHHh-ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ce
Confidence 33443 268888876 55666777777777544332222233 35678899999999988877763 35
Q ss_pred ecCCCCCCeEECCCCCeEEccCCcccccCCCccccccccCCccccCCCCccccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 006559 458 HGHLSSSNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVYSFGVVLLEILTGKMAKG 537 (640)
Q Consensus 458 Hrdlk~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~SfGvvl~el~tg~~p~~ 537 (640)
|--|.|+|++++.++.+++.-.|+...+ +|. ..+..-=.-.+=+++..+++++..|+
T Consensus 102 tf~L~P~NL~f~~~~~p~i~~RGik~~l-----------~P~------------~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 102 TFVLAPDELFFTRDGLPIAKTRGLQNVV-----------DPL------------PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECCCSGGGEEECTTSCEEESCCEETTTB-----------SCC------------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEEecceEEEcCCCCEEEEEccCccCC-----------CCC------------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 7789999999999999999988875433 222 01111123357788899999998875
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=81.16 E-value=0.22 Score=53.08 Aligned_cols=56 Identities=7% Similarity=-0.046 Sum_probs=16.1
Q ss_pred ccccccCcceEEEEEeCC-CcEEEE------EEecccc----chHHHHHHHHHHhccCCCcccceeEEEE
Q 006559 339 ELLGKGCVGATYKVVLDG-GDVVVV------KRIRERK----KKREVDEWLRVIGGLRHSNIVSIRAYCN 397 (640)
Q Consensus 339 ~~iG~G~fg~Vy~~~~~~-~~~vav------K~l~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~ 397 (640)
+.|| ||.||+|.+.. ...||| |..+... ....+.++..+++.++|||+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3455 99999999865 357888 7666532 1234667778888899999999988754
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=79.76 E-value=7.3 Score=36.39 Aligned_cols=114 Identities=11% Similarity=0.121 Sum_probs=78.9
Q ss_pred CCCcccceeEEEEcCCeEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHHHHHHH-HhhcCCCCCceecCCCC
Q 006559 385 RHSNIVSIRAYCNGKDELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDSAKGLA-FLHGYNKAHLFHGHLSS 463 (640)
Q Consensus 385 ~H~niv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrdlk~ 463 (640)
.||+. -...-.+++.+.+.|+.-+++.=...++ .++...+++++..++.-.. ++++ -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 57877 3444466788888888654543333443 3567889999999988777 6653 45778999
Q ss_pred CCeEECCCCCeEEccCCcccccCCCccccccccCCccccCCCCccccCCCCCccchH-HHHHHHHHHHhCCCCCC
Q 006559 464 SNIVVDQLGNACISDIGVHQLFHTPFFINDAYNAPELKFNNNNNYSQRKFWQRCDVY-SFGVVLLEILTGKMAKG 537 (640)
Q Consensus 464 ~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~k~DV~-SfGvvl~el~tg~~p~~ 537 (640)
+|+++|.++.+++.-.|+...+ +|.- . ...|-| .+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l-----------pP~e-------~------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL-----------PPDE-------W------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB-----------SSCS-------C------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCcccC-----------CCCC-------C------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999988875433 3331 0 122333 57778888888887764
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=77.89 E-value=0.29 Score=32.95 Aligned_cols=12 Identities=8% Similarity=-0.092 Sum_probs=5.5
Q ss_pred hhheeeeeeccc
Q 006559 270 TVTWCCYKRKRR 281 (640)
Q Consensus 270 ~~~~~~~rrkr~ 281 (640)
+.+|+++|||++
T Consensus 29 ~~~~~~~RRr~~ 40 (44)
T 2ks1_B 29 LGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHTTTC
T ss_pred HHHHHHhhhhHh
Confidence 444444455443
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=76.08 E-value=0.31 Score=32.76 Aligned_cols=12 Identities=17% Similarity=-0.017 Sum_probs=5.4
Q ss_pred hhheeeeeeccc
Q 006559 270 TVTWCCYKRKRR 281 (640)
Q Consensus 270 ~~~~~~~rrkr~ 281 (640)
+..|+++|||++
T Consensus 28 ~~~~~~~RRRr~ 39 (44)
T 2l2t_A 28 LTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHhhhhhh
Confidence 444444454443
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=47.79 E-value=1.7 Score=29.09 Aligned_cols=6 Identities=33% Similarity=0.550 Sum_probs=2.4
Q ss_pred eeeecc
Q 006559 275 CYKRKR 280 (640)
Q Consensus 275 ~~rrkr 280 (640)
+.|||+
T Consensus 34 ~~RRR~ 39 (44)
T 2jwa_A 34 LIKRRQ 39 (44)
T ss_dssp HHHHHC
T ss_pred heehhh
Confidence 334443
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=43.16 E-value=2.7 Score=27.24 Aligned_cols=7 Identities=14% Similarity=-0.064 Sum_probs=2.8
Q ss_pred heeeeee
Q 006559 272 TWCCYKR 278 (640)
Q Consensus 272 ~~~~~rr 278 (640)
.++++||
T Consensus 31 ~~~~~rr 37 (38)
T 2k1k_A 31 LVFRSRR 37 (38)
T ss_dssp HHHHHCC
T ss_pred HHHHeec
Confidence 3344443
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=36.15 E-value=8.1 Score=28.04 Aligned_cols=20 Identities=15% Similarity=0.162 Sum_probs=10.2
Q ss_pred eeehhHHHHHHHHHhhheee
Q 006559 256 IVIFDAVAILVAVVTVTWCC 275 (640)
Q Consensus 256 ~~~~~~v~~~~~~~~~~~~~ 275 (640)
+++++++.++++..+.++|+
T Consensus 12 ivlGg~~~lll~~glcI~cc 31 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFS 31 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHh
Confidence 44555555555554455534
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.54 E-value=4e+02 Score=26.31 Aligned_cols=78 Identities=13% Similarity=0.077 Sum_probs=40.7
Q ss_pred eEEEEEeccCCCCHHHhhccCCCCCCCCcCHHHHHHHHHHH--HHHHHHhhc-CCCCCcee-cCCCCCCeEECCCC-CeE
Q 006559 401 ELFLVYDYLPHGSLHSLLHGSRGPGRMPVDWNKRLKLASDS--AKGLAFLHG-YNKAHLFH-GHLSSSNIVVDQLG-NAC 475 (640)
Q Consensus 401 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i--a~gL~yLH~-~~~~~ivH-rdlk~~NILl~~~~-~~k 475 (640)
..+++|||.++-.|.+.-.... ...+... ...++ .-+++++.. ..+.+.+. .--.+.|||+++++ .+.
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~---~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~ 228 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA---PEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV 228 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH---HHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred cceehhhhcCCCccccchhhhh---hhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence 5779999998655443211100 0012211 22222 234445443 33333333 22568899998654 488
Q ss_pred EccCCccccc
Q 006559 476 ISDIGVHQLF 485 (640)
Q Consensus 476 l~DfGl~~~~ 485 (640)
++|-+++..-
T Consensus 229 ~IDhn~af~~ 238 (342)
T 1cja_A 229 PIDSKIIPLD 238 (342)
T ss_dssp ECSCCCCCCC
T ss_pred EEcCCccccC
Confidence 9998887543
Done!